PPanGGOLiN 1.2.105
A lot of the code was rewritten, but that should be relatively transparent for users
Bugfixes
- Shell subpartitions are properly saved in the HDF5 file and used in the different figures
- --meta option for
annotate
to annotate genomes using the metagenome mode of prodigal - --single_copy for
msa
to compute MSA using 'mostly single copy' persistent genes only - Cope with drawing more than 2000 identical spots in the same figure