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sequence to graph mapping didn't work neither #82

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lingliao opened this issue Nov 4, 2022 · 1 comment

lingliao commented Nov 4, 2022

I go with the command, minigraph -cx lr graph.gfa query.fa > out.gaf

the graph.gfa is generated by the test data provided by authors, MT-chimp.fa and MT-human.fa.

then I use the generated graph to map with MT-chimp.fa, the output is empty...

I call minigraph with docker image "quay.io/comparative-genomics-toolkit/cactus:v2.2.3"

Let me know if there is any way to update or only me meet the problem.

Szhiha commented Nov 13, 2023

+1

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