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Issues list

segmentation fault enhancement New feature or request
#1 opened Jul 8, 2019 by samlipworth
5
Runtime error: Assertion `k == n_a' failed bug Something isn't working
#5 opened Sep 30, 2019 by trgibbons
7
minigraph requires GFA 1.0 overlaps, which are optional in the spec question Further information is requested
#6 opened Oct 13, 2019 by edawson
4
[morecore] insufficient memory
#7 opened Oct 21, 2019 by fbemm
10
Could Make create a library to link against?
#15 opened Aug 6, 2020 by cgroza
transcriptome graphs
#16 opened Oct 21, 2020 by jdmontenegro
How should we interpret SR of the L line in rGFA
#19 opened Nov 21, 2020 by SHuang-Broad
5
different ranks? question Further information is requested
#20 opened Nov 24, 2020 by cistarsa
1
Does minigraph build genome graph including structural variants from a SV caller?
#22 opened Nov 27, 2020 by clairemerot
3
Fragmented back-mapping in a 2-sample graph
#24 opened Dec 1, 2020 by egoltsman
7
empty gfa file
#32 opened Jan 26, 2021 by rthapa1
7
--call outputs a path that doesn't exist in the graph bug Something isn't working
#35 opened Feb 10, 2021 by wwliao
3
read mapping to sam?
#36 opened Feb 22, 2021 by cistarsa
1
extract bubble unitigs from unitig.gfa
#39 opened Mar 17, 2021 by zhenzhenyang-psu
Effect of changing the minimizer occurrence threshold interval
#40 opened Mar 23, 2021 by egoltsman
Few nodes = poor alignment or good ?
#45 opened Apr 28, 2021 by egoltsman
2
a bubble with all paths matching?
#46 opened Apr 30, 2021 by egoltsman
Degenerate graph constructed
#48 opened Jun 28, 2021 by Pigrenok
1
Question about the coordinates in bubble output enhancement New feature or request question Further information is requested
#50 opened Jul 23, 2021 by egoltsman
1
Self-loop and cycles in rGFA question Further information is requested
#63 opened Apr 26, 2022 by gsc74
5
Question regarding -L (min variant length) parameter bug Something isn't working
#65 opened May 6, 2022 by cjain7
3
Large (Mb-scale) SVs
#69 opened Jun 30, 2022 by yuliamostovoy
Problem when simulate a simple graph
#72 opened Jul 22, 2022 by slbai01
minigraph and minimap2 alignment
#73 opened Aug 18, 2022 by 8banzhuan
1
Segmentation fault (core dumped) while generaing a genome graph
#81 opened Nov 2, 2022 by lingliao
4
ProTip! Exclude everything labeled bug with -label:bug.