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Cell cycle regress before run_scanorama? #227

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Zifeng-L opened this issue Jan 6, 2022 · 0 comments
Open

Cell cycle regress before run_scanorama? #227

Zifeng-L opened this issue Jan 6, 2022 · 0 comments

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@Zifeng-L
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Zifeng-L commented Jan 6, 2022

Hi @yihming, I tried to regress the cell-cycle genes effect before run scanorama. But I checked the source code of pg.run_scanorama, it seemed that scanorama cannot use the result of regress out function for further analysis. How can I solve this problem?
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@Zifeng-L