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Add heterozygous SNP test for homozygous deletions #273

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lima1 opened this issue Apr 6, 2023 · 0 comments
Open

Add heterozygous SNP test for homozygous deletions #273

lima1 opened this issue Apr 6, 2023 · 0 comments
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@lima1
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lima1 commented Apr 6, 2023

Calling homozygous deletions should be accompanied by a double check of SNPs in the segment. If not balanced, then flag. If no SNPs, flag unless high likelihood of deleted.
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