From cf5cf0a6ee9378b34997fccbcda95deac4494e12 Mon Sep 17 00:00:00 2001
From: Cornelius Roemer <cornelius.roemer@gmail.com>
Date: Fri, 10 May 2024 04:00:34 +0200
Subject: [PATCH] feat(ingest): Use NCBI API key, and don't retry, to not
 exceed request limits

---
 ingest/Snakefile | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/ingest/Snakefile b/ingest/Snakefile
index 8b47ecc2a..3c0a6a610 100644
--- a/ingest/Snakefile
+++ b/ingest/Snakefile
@@ -38,14 +38,15 @@ rule all:
 
 
 rule fetch_ncbi_dataset_package:
+    # TODO: #1844 Set API key through secret
     output:
         dataset_package="results/ncbi_dataset.zip",
-    retries: 5
     shell:
         """
         datasets download virus genome taxon {TAXON_ID} \
             --no-progressbar \
-            --filename {output.dataset_package}
+            --filename {output.dataset_package} \
+            --api-key 15c4ff96de265753f878bb08d88ca64df909 \
         """