Skip to content

Commit

Permalink
try to fix gcc version in CI
Browse files Browse the repository at this point in the history
  • Loading branch information
skoren authored Dec 19, 2024
1 parent cb323bc commit 9d8a620
Showing 1 changed file with 3 additions and 1 deletion.
4 changes: 3 additions & 1 deletion .github/workflows/makefile.yml
Original file line number Diff line number Diff line change
Expand Up @@ -45,8 +45,10 @@ jobs:
run: |
sudo apt-get update
mamba install -c conda-forge -c bioconda 'python=3.11' 'pulp<=2.7.0' 'snakemake-minimal>7,<8' GraphAligner mashmap winnowmap
sudo apt-get install libcurl4-openssl-dev liblzma-dev libbz2-dev
sudo apt-get install gcc-11 g++-11 libcurl4-openssl-dev liblzma-dev libbz2-dev
pip install networkx
sudo update-alternatives --install /usr/bin/gcc gcc /usr/bin/gcc-11 100
sudo update-alternatives --install /usr/bin/g++ g++ /usr/bin/g++-11 100
echo ""
echo "CONDA LIST"
Expand Down

0 comments on commit 9d8a620

Please sign in to comment.