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freia_funcs.py
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freia_funcs.py
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'''This Code is based on the FrEIA Framework, source: https://github.com/VLL-HD/FrEIA
It is a assembly of the necessary modules/functions from FrEIA that are needed for our purposes.'''
import torch
import torch.nn as nn
import torch.nn.functional as F
from torch.autograd import Variable
from math import exp
import numpy as np
VERBOSE = False
class dummy_data:
def __init__(self, *dims):
self.dims = dims
@property
def shape(self):
return self.dims
class F_fully_connected(nn.Module):
'''Fully connected tranformation, not reversible, but used below.'''
def __init__(self, size_in, size, internal_size=None, dropout=0.0):
super(F_fully_connected, self).__init__()
if not internal_size:
internal_size = 2*size
self.d1 = nn.Dropout(p=dropout)
self.d2 = nn.Dropout(p=dropout)
self.d2b = nn.Dropout(p=dropout)
self.fc1 = nn.Linear(size_in, internal_size)
self.fc2 = nn.Linear(internal_size, internal_size)
self.fc2b = nn.Linear(internal_size, internal_size)
self.fc3 = nn.Linear(internal_size, size)
self.nl1 = nn.ReLU()
self.nl2 = nn.ReLU()
self.nl2b = nn.ReLU()
self.bn = nn.BatchNorm1d(size_in)
def forward(self, x):
out = self.nl1(self.d1(self.fc1(x)))
out = self.nl2(self.d2(self.fc2(out)))
out = self.nl2b(self.d2b(self.fc2b(out)))
out = self.fc3(out)
return out
class permute_layer(nn.Module):
'''permutes input vector in a random but fixed way'''
def __init__(self, dims_in, seed):
super(permute_layer, self).__init__()
self.in_channels = dims_in[0][0]
np.random.seed(seed)
self.perm = np.random.permutation(self.in_channels)
np.random.seed()
self.perm_inv = np.zeros_like(self.perm)
for i, p in enumerate(self.perm):
self.perm_inv[p] = i
self.perm = torch.LongTensor(self.perm)
self.perm_inv = torch.LongTensor(self.perm_inv)
def forward(self, x, rev=False):
if not rev:
return [x[0][:, self.perm]]
else:
return [x[0][:, self.perm_inv]]
def jacobian(self, x, rev=False):
# TODO: use batch size, set as nn.Parameter so cuda() works
return 0.
def output_dims(self, input_dims):
assert len(input_dims) == 1, "Can only use 1 input"
return input_dims
class glow_coupling_layer(nn.Module):
def __init__(self, dims_in, F_class=F_fully_connected, F_args={},
clamp=5.):
super(glow_coupling_layer, self).__init__()
channels = dims_in[0][0]
self.ndims = len(dims_in[0])
self.split_len1 = channels // 2
self.split_len2 = channels - channels // 2
self.clamp = clamp
self.max_s = exp(clamp)
self.min_s = exp(-clamp)
self.s1 = F_class(self.split_len1, self.split_len2*2, **F_args)
self.s2 = F_class(self.split_len2, self.split_len1*2, **F_args)
def e(self, s):
return torch.exp(self.log_e(s))
def log_e(self, s):
return self.clamp * 0.636 * torch.atan(s / self.clamp)
def forward(self, x, rev=False):
x1, x2 = (x[0].narrow(1, 0, self.split_len1),
x[0].narrow(1, self.split_len1, self.split_len2))
if not rev:
r2 = self.s2(x2)
s2, t2 = r2[:, :self.split_len1], r2[:, self.split_len1:]
#print(s2.shape, x1.shape, t2.shape)
y1 = self.e(s2) * x1 + t2
r1 = self.s1(y1)
s1, t1 = r1[:, :self.split_len2], r1[:, self.split_len2:]
y2 = self.e(s1) * x2 + t1
else: # names of x and y are swapped!
r1 = self.s1(x1)
s1, t1 = r1[:, :self.split_len2], r1[:, self.split_len2:]
y2 = (x2 - t1) / self.e(s1)
r2 = self.s2(y2)
s2, t2 = r2[:, :self.split_len1], r2[:, self.split_len1:]
y1 = (x1 - t2) / self.e(s2)
y = torch.cat((y1, y2), 1)
y = torch.clamp(y, -1e6, 1e6)
return [y]
def jacobian(self, x, rev=False):
x1, x2 = (x[0].narrow(1, 0, self.split_len1),
x[0].narrow(1, self.split_len1, self.split_len2))
if not rev:
r2 = self.s2(x2)
s2, t2 = r2[:, :self.split_len1], r2[:, self.split_len1:]
y1 = self.e(s2) * x1 + t2
r1 = self.s1(y1)
s1, t1 = r1[:, :self.split_len2], r1[:, self.split_len2:]
else: # names of x and y are swapped!
r1 = self.s1(x1)
s1, t1 = r1[:, :self.split_len2], r1[:, self.split_len2:]
y2 = (x2 - t1) / self.e(s1)
r2 = self.s2(y2)
s2, t2 = r2[:, :self.split_len1], r2[:, self.split_len1:]
jac = (torch.sum(self.log_e(s1), dim=1)
+ torch.sum(self.log_e(s2), dim=1))
for i in range(self.ndims-1):
jac = torch.sum(jac, dim=1)
return jac
def output_dims(self, input_dims):
assert len(input_dims) == 1, "Can only use 1 input"
return input_dims
class Node:
'''The Node class represents one transformation in the graph, with an
arbitrary number of in- and outputs.'''
def __init__(self, inputs, module_type, module_args, name=None):
self.inputs = inputs
self.outputs = []
self.module_type = module_type
self.module_args = module_args
self.input_dims, self.module = None, None
self.computed = None
self.computed_rev = None
self.id = None
if name:
self.name = name
else:
self.name = hex(id(self))[-6:]
for i in range(255):
exec('self.out{0} = (self, {0})'.format(i))
def build_modules(self, verbose=VERBOSE):
''' Returns a list with the dimension of each output of this node,
recursively calling build_modules of the nodes connected to the input.
Use this information to initialize the pytorch nn.Module of this node.
'''
if not self.input_dims: # Only do it if this hasn't been computed yet
self.input_dims = [n.build_modules(verbose=verbose)[c]
for n, c in self.inputs]
try:
self.module = self.module_type(self.input_dims,
**self.module_args)
except Exception as e:
print('Error in node %s' % (self.name))
raise e
if verbose:
print("Node %s has following input dimensions:" % (self.name))
for d, (n, c) in zip(self.input_dims, self.inputs):
print("\t Output #%i of node %s:" % (c, n.name), d)
print()
self.output_dims = self.module.output_dims(self.input_dims)
self.n_outputs = len(self.output_dims)
return self.output_dims
def run_forward(self, op_list):
'''Determine the order of operations needed to reach this node. Calls
run_forward of parent nodes recursively. Each operation is appended to
the global list op_list, in the form (node ID, input variable IDs,
output variable IDs)'''
if not self.computed:
# Compute all nodes which provide inputs, filter out the
# channels you need
self.input_vars = []
for i, (n, c) in enumerate(self.inputs):
self.input_vars.append(n.run_forward(op_list)[c])
# Register youself as an output in the input node
n.outputs.append((self, i))
# All outputs could now be computed
self.computed = [(self.id, i) for i in range(self.n_outputs)]
op_list.append((self.id, self.input_vars, self.computed))
# Return the variables you have computed (this happens mulitple times
# without recomputing if called repeatedly)
return self.computed
def run_backward(self, op_list):
'''See run_forward, this is the same, only for the reverse computation.
Need to call run_forward first, otherwise this function will not
work'''
assert len(self.outputs) > 0, "Call run_forward first"
if not self.computed_rev:
# These are the input variables that must be computed first
output_vars = [(self.id, i) for i in range(self.n_outputs)]
# Recursively compute these
for n, c in self.outputs:
n.run_backward(op_list)
# The variables that this node computes are the input variables
# from the forward pass
self.computed_rev = self.input_vars
op_list.append((self.id, output_vars, self.computed_rev))
return self.computed_rev
class InputNode(Node):
'''Special type of node that represents the input data of the whole net (or
ouput when running reverse)'''
def __init__(self, *dims, name='node'):
self.name = name
self.data = dummy_data(*dims)
self.outputs = []
self.module = None
self.computed_rev = None
self.n_outputs = 1
self.input_vars = []
self.out0 = (self, 0)
def build_modules(self, verbose=VERBOSE):
return [self.data.shape]
def run_forward(self, op_list):
return [(self.id, 0)]
class OutputNode(Node):
'''Special type of node that represents the output of the whole net (of the
input when running in reverse)'''
class dummy(nn.Module):
def __init__(self, *args):
super(OutputNode.dummy, self).__init__()
def __call__(*args):
return args
def output_dims(*args):
return args
def __init__(self, inputs, name='node'):
self.module_type, self.module_args = self.dummy, {}
self.output_dims = []
self.inputs = inputs
self.input_dims, self.module = None, None
self.computed = None
self.id = None
self.name = name
for c, inp in enumerate(self.inputs):
inp[0].outputs.append((self, c))
def run_backward(self, op_list):
return [(self.id, 0)]
class ReversibleGraphNet(nn.Module):
'''This class represents the invertible net itself. It is a subclass of
torch.nn.Module and supports the same methods. The forward method has an
additional option 'rev', whith which the net can be computed in reverse.'''
def __init__(self, node_list, ind_in=None, ind_out=None, verbose=False):
'''node_list should be a list of all nodes involved, and ind_in,
ind_out are the indexes of the special nodes InputNode and OutputNode
in this list.'''
super(ReversibleGraphNet, self).__init__()
# Gather lists of input and output nodes
if ind_in is not None:
if isinstance(ind_in, int):
self.ind_in = list([ind_in])
else:
self.ind_in = ind_in
else:
self.ind_in = [i for i in range(len(node_list))
if isinstance(node_list[i], InputNode)]
assert len(self.ind_in) > 0, "No input nodes specified."
if ind_out is not None:
if isinstance(ind_out, int):
self.ind_out = list([ind_out])
else:
self.ind_out = ind_out
else:
self.ind_out = [i for i in range(len(node_list))
if isinstance(node_list[i], OutputNode)]
assert len(self.ind_out) > 0, "No output nodes specified."
self.return_vars = []
self.input_vars = []
# Assign each node a unique ID
self.node_list = node_list
for i, n in enumerate(node_list):
n.id = i
# Recursively build the nodes nn.Modules and determine order of
# operations
ops = []
for i in self.ind_out:
node_list[i].build_modules(verbose=verbose)
node_list[i].run_forward(ops)
# create list of Pytorch variables that are used
variables = set()
for o in ops:
variables = variables.union(set(o[1] + o[2]))
self.variables_ind = list(variables)
self.indexed_ops = self.ops_to_indexed(ops)
self.module_list = nn.ModuleList([n.module for n in node_list])
self.variable_list = [Variable(requires_grad=True) for v in variables]
# Find out the order of operations for reverse calculations
ops_rev = []
for i in self.ind_in:
node_list[i].run_backward(ops_rev)
self.indexed_ops_rev = self.ops_to_indexed(ops_rev)
def ops_to_indexed(self, ops):
'''Helper function to translate the list of variables (origin ID, channel),
to variable IDs.'''
result = []
for o in ops:
try:
vars_in = [self.variables_ind.index(v) for v in o[1]]
except ValueError:
vars_in = -1
vars_out = [self.variables_ind.index(v) for v in o[2]]
# Collect input/output nodes in separate lists, but don't add to
# indexed ops
if o[0] in self.ind_out:
self.return_vars.append(self.variables_ind.index(o[1][0]))
continue
if o[0] in self.ind_in:
self.input_vars.append(self.variables_ind.index(o[1][0]))
continue
result.append((o[0], vars_in, vars_out))
# Sort input/output variables so they correspond to initial node list
# order
self.return_vars.sort(key=lambda i: self.variables_ind[i][0])
self.input_vars.sort(key=lambda i: self.variables_ind[i][0])
return result
def forward(self, x, rev=False):
'''Forward or backward computation of the whole net.'''
if rev:
use_list = self.indexed_ops_rev
input_vars, output_vars = self.return_vars, self.input_vars
else:
use_list = self.indexed_ops
input_vars, output_vars = self.input_vars, self.return_vars
if isinstance(x, (list, tuple)):
assert len(x) == len(input_vars), (
f"Got list of {len(x)} input tensors for "
f"{'inverse' if rev else 'forward'} pass, but expected "
f"{len(input_vars)}."
)
for i in range(len(input_vars)):
self.variable_list[input_vars[i]] = x[i]
else:
assert len(input_vars) == 1, (f"Got single input tensor for "
f"{'inverse' if rev else 'forward'} "
f"pass, but expected list of "
f"{len(input_vars)}.")
self.variable_list[input_vars[0]] = x
for o in use_list:
try:
results = self.module_list[o[0]]([self.variable_list[i]
for i in o[1]], rev=rev)
except TypeError:
raise RuntimeError("Are you sure all used Nodes are in the "
"Node list?")
for i, r in zip(o[2], results):
self.variable_list[i] = r
# self.variable_list[o[2][0]] = self.variable_list[o[1][0]]
out = [self.variable_list[output_vars[i]]
for i in range(len(output_vars))]
if len(out) == 1:
return out[0]
else:
return out
def jacobian(self, x=None, rev=False, run_forward=True):
'''Compute the jacobian determinant of the whole net.'''
jacobian = 0
if rev:
use_list = self.indexed_ops_rev
else:
use_list = self.indexed_ops
if run_forward:
if x is None:
raise RuntimeError("You need to provide an input if you want "
"to run a forward pass")
self.forward(x, rev=rev)
jacobian_list = list()
for o in use_list:
try:
node_jac = self.module_list[o[0]].jacobian(
[self.variable_list[i] for i in o[1]], rev=rev
)
jacobian += node_jac
jacobian_list.append(jacobian)
except TypeError:
raise RuntimeError("Are you sure all used Nodes are in the "
"Node list?")
return jacobian