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Some points from your talk #19

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markziemann opened this issue Nov 2, 2020 · 0 comments
Open

Some points from your talk #19

markziemann opened this issue Nov 2, 2020 · 0 comments
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@markziemann
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Here are some things to fix in the Rmd based on todays presentation:

  • Volcano plot. We should look at making the x axis the delta-beta value

  • Enrichment plots. There should be a dashed line at x=1 so that we can see what is significant

  • Beeswarm. There was a heading saying logFC which isn't correct

  • Litzky figures. The volcano plot wasn't square like the others so you need to make sure the chunk has fig.height=8,fig.width=8

  • Meta-analysis effect sizes. We need to quantify the effect sizes. We should also make forest plots for the probes and DMRs

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