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Correct representation of ncRNA in kallisto ressults #104

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markziemann opened this issue Nov 13, 2024 · 0 comments
Open

Correct representation of ncRNA in kallisto ressults #104

markziemann opened this issue Nov 13, 2024 · 0 comments

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@markziemann
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As per #49 here is an easy way to get a fasta of all transcripts.

This should be incorporated in the next major genome assembly updates for human and mouse - to the T2T assembly

gffread Homo_sapiens.GRCh38.113.gff3 -g Homo_sapiens.GRCh38.dna_sm.primary_assembly.fa -w transcripts.fasta​
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@markziemann