DESCRIPTION

Package: getDEE2
Title: Programmatic access to the DEE2 RNA expression dataset
Version: 1.17.3
Authors@R: c(
    person(given = "Mark",
        family = "Ziemann",
        role = c("aut","cre"),
        email = "mark.ziemann@gmail.com"),
    person(given="Antony",
        family="Kaspi",
        role = c("aut"))
    )
Description: Digital Expression Explorer 2 (or DEE2 for short) is a repository
    of processed RNA-seq data in the form of counts. It was designed so that
    researchers could undertake re-analysis and meta-analysis of published
    RNA-seq studies quickly and easily. As of April 2020, over 1 million
    SRA datasets have been processed. This package provides an R interface
    to access these expression data. More information about the DEE2 project
    can be found at the project homepage (http://dee2.io) and main publication
    (https://doi.org/10.1093/gigascience/giz022).
Depends: R (>= 4.0)
Imports: stats, utils, SummarizedExperiment, htm2txt
Suggests: knitr, testthat, rmarkdown
License: GPL-3
Encoding: UTF-8
URL: https://github.com/markziemann/getDEE2
RoxygenNote: 7.1.1
biocViews: GeneExpression, Transcriptomics, Sequencing
VignetteBuilder: knitr
BugReport: https://github.com/markziemann/getDEE2
git_url: https://git.bioconductor.org/packages/getDEE2
git_branch: devel
git_last_commit: a598524
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.21
Date/Publication: 2024-10-29
NeedsCompilation: no
Packaged: 2024-10-29 21:36:10 UTC; biocbuild
Author: Mark Ziemann [aut, cre],
  Antony Kaspi [aut]
Maintainer: Mark Ziemann <mark.ziemann@gmail.com>