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Converter for Bruker image data
matthew-brett/pvconv
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pvconv ------ pvconv is a converter for Bruker format MRI image data. It contains some programs including the converter, and libraries supporting reads of Bruker data and handling of Analyze and matlab format files. See html documentation at http://pvconv.sourceforge.net. PREREQUISITES In order to install and use this package you will need Perl version 5. Some modules within this package depend on other packages that are distributed separately from Perl. We will need the following packages installed before you install pvconv: Math-Matrix Getopt-ArgvFile These packages should be available on CPAN (see below). INSTALLATION You install pvconv using the normal perl module distribution drill: perl Makefile.PL make make install If you want to install a private copy of pvconv in your home directory, then you should try to produce the initial Makefile with something like this command: perl Makefile.PL PREFIX=~/perl This will put all the library modules in ~/perl/lib, and the scripts in ~/perl/bin. If you want to be more tricky you could try something like: perl Makefile.PL LIB=~/perl INSTALLBIN=~/bin will put the libraries into ~/perl/lib, and the scripts into ~/bin. The Makefile.PL program will start out by checking your perl installation for a few packages that are recommended to be installed together with pvconv. DOCUMENTATION There is html documentation at http://pvconv.sourceforge.net. Also, see the pod documentation in pvconv.pl for an overview of the program. See ./CHANGES for recent changes. POD style documentation is included in the scripts pvconv.pl and pvshow.pl. These are normally converted to manual pages and installed as part of the "make install" process. You should also be able to use the 'perldoc' utility to extract and read documentation from the files directly. LINKS The example Bruker data text files report themselves as being in JCAMP-DX format. For information on this format, see: http://jcamp-dx.org/ In particular, the example files say they are in JCAMP-DX 4.24 format. The reference for this format appears to be: http://jcamp-dx.org/protocols/dxir01.pdf SUPPORT Please send questions and bug reports to [email protected] AVAILABILITY The latest version of pvconv should always be available from: http://pvconv.sourceforge.net COPYRIGHT © 2001-2004 Matthew Brett. Andrew Janke. All rights reserved. This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
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