Testing if GitAction can be configured to acquire biocmanager packages

mattssca · Feb 9, 2024 · c05a838 · c05a838
1 parent f7a7bdb
commit c05a838
Showing 1 changed file with 4 additions and 0 deletions.
diff --git a/.github/workflows/build_test.yml b/.github/workflows/build_test.yml
@@ -19,6 +19,10 @@ jobs:
 
       - name: Check out repository
         uses: actions/checkout@v3
+
+      - name: Get biocmanager packages
+        run: Rscript -e "install.packages('BiocManager')"
+        run: Rscript -e "BiocManager::install(c("GenomicRanges","rtracklayer"))"
 
       - name: Build package
         run: Rscript -e "devtools::install()"