makefile_neuropil_tools

.PHONY: all clean install

all:
	#cd contour_tiler/contour_tiler; make
	cd obj_tag_region; make
	cd recon2obj; make
	cd reconstruct_interpolate; make
	cd imod2reconstruct; make

clean:
	#cd contour_tiler/contour_tiler; make clean
	cd obj_tag_region; make clean
	cd recon2obj; make clean
	cd reconstruct_interpolate; make clean
	cd imod2reconstruct; make clean

install: all
	@[ "${INSTALL_DIR}" ] && echo "Installing" || ( echo "INSTALL_DIR is not set"; exit 1 )
	mkdir -p ${INSTALL_DIR}
	#cp contour_tiler/contour_tiler/contour_tiler${EXE} ${INSTALL_DIR}/ContourTilerBin${EXE}
	cp insert_mdl_region/insert_mdl_region.py ${INSTALL_DIR}/insert_mdl_region.py
	cp obj_tag_region/obj_tag_region${EXE} ${INSTALL_DIR}/obj_tag_region${EXE}
	cp rawc2obj/rawc2obj.py ${INSTALL_DIR}/rawc2obj.py
	cp recon2obj/recon2obj${EXE} ${INSTALL_DIR}/recon2obj${EXE}
	cp reconstruct_interpolate/reconstruct_interpolate${EXE} ${INSTALL_DIR}/reconstruct_interpolate${EXE}
	cp imod2reconstruct/imod2reconstruct${EXE} ${INSTALL_DIR}/imod2reconstruct${EXE}