From 9077f2e1c0aec17d71ff68167c34f412b94e4f68 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bertrand=20N=C3=A9ron?= Date: Wed, 30 Oct 2024 10:29:03 +0100 Subject: [PATCH] Update README.md update reference to MacSyFinder --- README.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 15c9cfd..70045da 100644 --- a/README.md +++ b/README.md @@ -6,8 +6,8 @@ DefenseFinder is a program to systematically detect known anti-phage systems. De If you are using DefenseFinder please cite - "Systematic and quantitative view of the antiviral arsenal of prokaryotes" [Nature Communication](https://www.nature.com/articles/s41467-022-30269-9.pdf), 2022, _Tesson F., Hervé A. , Mordret E., Touchon M., d’Humières C., Cury J., Bernheim A._ -- "MacSyFinder: A Program to Mine Genomes for Molecular Systems with an Application to CRISPR-Cas Systems." PloS one 2014 - _Abby S., Néron B.,Ménager H., Touchon M. Rocha EPC._ +- "MacSyFinder v2: Improved modelling and search engine to identify molecular systems in genomes." [Peer Community Journal, Volume 3 (2023), article no. e28](https://peercommunityjournal.org/articles/10.24072/pcjournal.250/). + _Néron, Bertrand; Denise, Rémi; Coluzzi, Charles; Touchon, Marie; Rocha, Eduardo P.C.; Abby, Sophie S._ - "CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins." Nucleic Acids Research 2018 Couvin D. et al. ## DefenseFinder Models