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On OCT dataset #6

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zenglingqi647 opened this issue Apr 14, 2023 · 1 comment
Open

On OCT dataset #6

zenglingqi647 opened this issue Apr 14, 2023 · 1 comment

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@zenglingqi647
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Hi!

In test_oct.sh, it has

--vimg_path="$DATAROOT"/cirrus/image/
--vlabel_path="$DATAROOT"/cirrus/label/
--sub_name="$DATAROOT"/cirrus/cirrus_name.txt \

However, I was wondering how to obtain the cirrus data. The data I obtained from the website has names like ms21_spectralis_macula_v1_s1_R.mat, and hc01_spectralis_macula_v1_s1_R.vol.

What's more, the data downloaded are in .mat format in delineation. Do we need to process them or can we directly use them for the model?

@nocoder657
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Hi, following the ATTA paper, the cirrus data should be processed as PNG/JPG images. The label should be also transformed into the grayscale images.

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