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Merge pull request #333 from metrumresearchgroup/release/3.3.1
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Prepare 3.3.1 release
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kyleam authored Sep 26, 2024
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# bbi 3.3.1

Documentation is now available at
<https://metrumresearchgroup.github.io/bbi/docs/>.

## Changes

* The documentation of many subcommands has been updated and expanded.
(#329)

## Bug fixes

* `bbi nonmem probs` did not correctly handle its optional directory
argument. (#328)

* `bbi nonmem clean` failed to delete files extracted from
`*_copied.json` files (enabled when `--copiedRuns` is used) due to
incorrect path handling. (#331)


# bbi 3.3.0

## New features
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