diff --git a/test_output/large_test_stats.json b/test_output/large_test_stats.json new file mode 100755 index 0000000..fe4b13a --- /dev/null +++ b/test_output/large_test_stats.json @@ -0,0 +1,28 @@ +{ + "scaffolds": 25864, + "contigs": 26208, + "scaf_bp": 59381150, + "contig_bp": 59375550, + "gap_pct": 0.00943, + "scaf_N50": 160, + "scaf_L50": 30118, + "ctg_N50": 174, + "ctg_L50": 29308, + "scaf_N90": 13231, + "scaf_L90": 778, + "ctg_N90": 13472, + "ctg_L90": 768, + "scaf_logsum": 777856, + "scaf_powsum": 151872, + "ctg_logsum": 770771, + "ctg_powsum": 147971, + "asm_score": 37.106, + "scaf_max": 1491105, + "ctg_max": 955383, + "scaf_n_gt50K": 127, + "scaf_l_gt50K": 28369787, + "scaf_pct_gt50K": 47.775745, + "gc_avg": 0.46903, + "gc_std": 0.06275, + "filename": "/vol_b/nmdc_workflows/cromwell/cromwell-executions/jgi_metaASM/60433c85-4b35-4f56-b277-6e671ef421cd/call-create_agp/execution/assembly_scaffolds.fna" +} diff --git a/test_output/small_test_stats.json b/test_output/small_test_stats.json new file mode 100755 index 0000000..df77bc4 --- /dev/null +++ b/test_output/small_test_stats.json @@ -0,0 +1,28 @@ +{ + "scaffolds": 616, + "contigs": 621, + "scaf_bp": 4569143, + "contig_bp": 4569093, + "gap_pct": 0.00109, + "scaf_N50": 109, + "scaf_L50": 13297, + "ctg_N50": 110, + "ctg_L50": 13163, + "scaf_N90": 358, + "scaf_L90": 3733, + "ctg_N90": 360, + "ctg_L90": 3730, + "scaf_logsum": 61316, + "scaf_powsum": 8559.989, + "ctg_logsum": 61261, + "ctg_powsum": 8543.525, + "asm_score": 15.724, + "scaf_max": 42665, + "ctg_max": 42665, + "scaf_n_gt50K": 0, + "scaf_l_gt50K": 0, + "scaf_pct_gt50K": 0.0, + "gc_avg": 0.50728, + "gc_std": 0.03838, + "filename": "/vol_b/nmdc_workflows/cromwell/cromwell-executions/jgi_metaASM/afb845a0-1b9b-4335-b0d7-ece75b946a06/call-create_agp/execution/assembly_scaffolds.fna" +}