diff --git a/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json b/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json index 98a78074..e9655545 100644 --- a/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json +++ b/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json @@ -26,6 +26,15 @@ "description": "Filtered Stats for gold:Gp0138727", "data_object_type": "QC Statistics" }, + { + "id": "nmdc:11bee827a9abef578eb6610dc515fe04", + "file_size_bytes": 541974, + "md5_checksum": "11bee827a9abef578eb6610dc515fe04", + "name": "gold:Gp0138727_Kraken2 TSV report", + "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/ReadbasedAnalysis/nmdc_mga0ac72_kraken2_report.tsv", + "description": "Kraken2 TSV report for gold:Gp0138727", + "data_object_type": "Kraken2 Classification Report" + }, { "id": "nmdc:78f35ca49a6bedf472f7dd61ae7a49d3", "file_size_bytes": 644836, @@ -43,15 +52,6 @@ "description": "Centrifuge Krona HTML report for gold:Gp0138727", "data_object_type": "Centrifuge Krona Plot" }, - { - "id": "nmdc:a5468325ed4b6b62bb116ff5142ff33d", - "file_size_bytes": 233405, - "md5_checksum": "a5468325ed4b6b62bb116ff5142ff33d", - "name": "gold:Gp0138727_Gottcha2 Krona HTML report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/ReadbasedAnalysis/nmdc_mga0ac72_gottcha2_krona.html", - "description": "Gottcha2 Krona HTML report for gold:Gp0138727", - "data_object_type": "GOTTCHA2 Krona Plot" - }, { "id": "nmdc:fa401a0a97e73130ebfffcb25efef945", "file_size_bytes": 252648, @@ -61,6 +61,15 @@ "description": "Centrifuge TSV report for gold:Gp0138727", "data_object_type": "Centrifuge Classification Report" }, + { + "id": "nmdc:920790e781e64cd3eed3a32c521ffda7", + "file_size_bytes": 3475076, + "md5_checksum": "920790e781e64cd3eed3a32c521ffda7", + "name": "gold:Gp0138727_Kraken2 Krona HTML report", + "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/ReadbasedAnalysis/nmdc_mga0ac72_kraken2_krona.html", + "description": "Kraken2 Krona HTML report for gold:Gp0138727", + "data_object_type": "Kraken2 Krona Plot" + }, { "id": "nmdc:a1fd51f1e8db0648782ae6d29e583d5b", "file_size_bytes": 1024029935, @@ -70,6 +79,15 @@ "description": "Kraken classification TSV report for gold:Gp0138727", "data_object_type": "Kraken2 Taxonomic Classification" }, + { + "id": "nmdc:a5468325ed4b6b62bb116ff5142ff33d", + "file_size_bytes": 233405, + "md5_checksum": "a5468325ed4b6b62bb116ff5142ff33d", + "name": "gold:Gp0138727_Gottcha2 Krona HTML report", + "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/ReadbasedAnalysis/nmdc_mga0ac72_gottcha2_krona.html", + "description": "Gottcha2 Krona HTML report for gold:Gp0138727", + "data_object_type": "GOTTCHA2 Krona Plot" + }, { "id": "nmdc:9a9b94f65b6f0af2208735238ddeb02c", "file_size_bytes": 1965565144, @@ -79,24 +97,6 @@ "description": "Centrifuge classification TSV report for gold:Gp0138727", "data_object_type": "Centrifuge Taxonomic Classification" }, - { - "id": "nmdc:11bee827a9abef578eb6610dc515fe04", - "file_size_bytes": 541974, - "md5_checksum": "11bee827a9abef578eb6610dc515fe04", - "name": "gold:Gp0138727_Kraken2 TSV report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/ReadbasedAnalysis/nmdc_mga0ac72_kraken2_report.tsv", - "description": "Kraken2 TSV report for gold:Gp0138727", - "data_object_type": "Kraken2 Classification Report" - }, - { - "id": "nmdc:920790e781e64cd3eed3a32c521ffda7", - "file_size_bytes": 3475076, - "md5_checksum": "920790e781e64cd3eed3a32c521ffda7", - "name": "gold:Gp0138727_Kraken2 Krona HTML report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/ReadbasedAnalysis/nmdc_mga0ac72_kraken2_krona.html", - "description": "Kraken2 Krona HTML report for gold:Gp0138727", - "data_object_type": "Kraken2 Krona Plot" - }, { "id": "nmdc:dce7c900d1ab453a1d95bd3979c7a017", "file_size_bytes": 2184, @@ -105,15 +105,6 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/ReadbasedAnalysis/nmdc_mga0ac72_gottcha2_report.tsv", "description": "Gottcha2 TSV report for gold:Gp0138727" }, - { - "id": "nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de", - "file_size_bytes": 209350820, - "md5_checksum": "8ea1e1eab9d34bfb48cf83dccb8e95de", - "name": "gold:Gp0138727_Assembled contigs fasta", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/assembly/nmdc_mga0ac72_contigs.fna", - "description": "Assembled contigs fasta for gold:Gp0138727", - "data_object_type": "Assembly Contigs" - }, { "id": "nmdc:3393ec1177ba82d1b16364a757a19173", "file_size_bytes": 29349873, @@ -123,6 +114,14 @@ "description": "Assembled AGP file for gold:Gp0138727", "data_object_type": "Assembly AGP" }, + { + "id": "nmdc:623f8105bab94519da3d5a620b8bf6da", + "file_size_bytes": 34262977, + "md5_checksum": "623f8105bab94519da3d5a620b8bf6da", + "name": "gold:Gp0138727_Metagenome Contig Coverage Stats", + "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/assembly/nmdc_mga0ac72_covstats.txt", + "description": "Metagenome Contig Coverage Stats for gold:Gp0138727" + }, { "id": "nmdc:19023d87b3cdd9de7b40dbfc23e38c89", "file_size_bytes": 2559275703, @@ -142,61 +141,38 @@ "data_object_type": "Assembly Scaffolds" }, { - "id": "nmdc:623f8105bab94519da3d5a620b8bf6da", - "file_size_bytes": 34262977, - "md5_checksum": "623f8105bab94519da3d5a620b8bf6da", - "name": "gold:Gp0138727_Metagenome Contig Coverage Stats", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/assembly/nmdc_mga0ac72_covstats.txt", - "description": "Metagenome Contig Coverage Stats for gold:Gp0138727" - }, - { - "id": "nmdc:a28899511c3daa0b6aced1e11a875548", - "file_size_bytes": 170962533, - "md5_checksum": "a28899511c3daa0b6aced1e11a875548", - "name": "gold:Gp0138727_Prodigal GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/annotation/nmdc_mga0ac72_prodigal.gff", - 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gold:Gp0138727" + "id": "nmdc:3ac986bab3bb921e02aadcada39a64cd", + "file_size_bytes": 115671712, + "md5_checksum": "3ac986bab3bb921e02aadcada39a64cd", + "name": "gold:Gp0138727_Genemark GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/annotation/nmdc_mga0ac72_genemark.gff", + "description": "Genemark GFF file for gold:Gp0138727" }, { "id": "nmdc:60e047950ea225f6ac8f677dbae225ed", @@ -214,48 +190,6 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/annotation/nmdc_mga0ac72_rfam_misc_bind_misc_feature_regulatory.gff", "description": "RFAM misc binding GFF file for gold:Gp0138727" }, - { - "id": "nmdc:a947acf706f9fc7539d50169d72e015f", - "file_size_bytes": 5544614, - "md5_checksum": "a947acf706f9fc7539d50169d72e015f", - "name": "gold:Gp0138727_TigrFam GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/annotation/nmdc_mga0ac72_tigrfam.gff", - "description": "TigrFam GFF file for gold:Gp0138727" - }, - { - "id": 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+ "description": "Prodigal GFF file for gold:Gp0138727" + }, + { + "id": "nmdc:94edd28d2b641ba4f0e885ef0bc72b00", + "file_size_bytes": 51752, + "md5_checksum": "94edd28d2b641ba4f0e885ef0bc72b00", + "name": "gold:Gp0138727_CRT GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/annotation/nmdc_mga0ac72_crt.gff", + "description": "CRT GFF file for gold:Gp0138727" }, { "id": "nmdc:2a483528125e727ebb6b1c95269fcc97", @@ -290,13 +265,12 @@ "description": "KO_EC GFF file for gold:Gp0138727" }, { - "id": "nmdc:baad9903d8f79540001fdf080a5cd297", - "file_size_bytes": 13778666, - "md5_checksum": "baad9903d8f79540001fdf080a5cd297", - "name": "gold:Gp0138727_KO TSV file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ac72/annotation/nmdc_mga0ac72_ko.tsv", - "description": "KO TSV file for gold:Gp0138727", - "data_object_type": "Annotation KEGG Orthology" + "id": "nmdc:a947acf706f9fc7539d50169d72e015f", + "file_size_bytes": 5544614, + "md5_checksum": 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Contig Coverage Stats for gold:Gp0138728" + "id": "nmdc:cb0d9e427179d63f3b38a5fc2eb53c02", + "file_size_bytes": 311179504, + "md5_checksum": "cb0d9e427179d63f3b38a5fc2eb53c02", + "name": "gold:Gp0138728_Assembled contigs fasta", + "url": "https://data.microbiomedata.org/data/nmdc:mga0k311/assembly/nmdc_mga0k311_contigs.fna", + "description": "Assembled contigs fasta for gold:Gp0138728", + "data_object_type": "Assembly Contigs" }, { "id": "nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d", @@ -614,6 +614,31 @@ "description": "Assembled scaffold fasta for gold:Gp0138728", "data_object_type": "Assembly Scaffolds" }, + { + "id": "nmdc:bf7ae846284f9eba2f0e313d80159222", + "file_size_bytes": 153414277, + "md5_checksum": "bf7ae846284f9eba2f0e313d80159222", + "name": "gold:Gp0138728_Protein FAA", + "url": "https://data.microbiomedata.org/data/nmdc:mga0k311/annotation/nmdc_mga0k311_proteins.faa", + "description": "Protein FAA for gold:Gp0138728", + "data_object_type": "Annotation Amino Acid FASTA" + }, + 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+ "description": "metabat2 bin checkm quality assessment result for gold:Gp0138736", + "data_object_type": "CheckM Statistics" }, { "id": "nmdc:b840f22de32b13e90b128d4f1448012b", @@ -7020,15 +7029,6 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0gt36/MAGs/nmdc_mga0gt36_hqmq_bin.zip", "description": "high-quality and medium-quality bins for gold:Gp0138736", "data_object_type": "Metagenome Bins" - }, - { - "id": "nmdc:b09e982b9d6f3ee0dc49048ca38b0088", - "file_size_bytes": 4644, - "md5_checksum": "b09e982b9d6f3ee0dc49048ca38b0088", - "name": "gold:Gp0138736_metabat2 bin checkm quality assessment result", - "url": "https://data.microbiomedata.org/data/nmdc:mga0gt36/MAGs/nmdc_mga0gt36_checkm_qa.out", - "description": "metabat2 bin checkm quality assessment result for gold:Gp0138736", - "data_object_type": "CheckM Statistics" } ], "mags_activity_set": [ @@ -7698,13 +7698,31 @@ "data_object_type": "Filtered Sequencing Reads" }, { - "id": "nmdc:329c66c52b773c8668a4d3b0790c599c", - 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gold:Gp0138733", - "data_object_type": "Annotation Amino Acid FASTA" + "id": "nmdc:f069bf3e61bc25b7317b034e9c44641a", + "file_size_bytes": 150436255, + "md5_checksum": "f069bf3e61bc25b7317b034e9c44641a", + "name": "gold:Gp0138733_Functional annotation GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0vd86/annotation/nmdc_mga0vd86_functional_annotation.gff", + "description": "Functional annotation GFF file for gold:Gp0138733", + "data_object_type": "Functional Annotation GFF" }, { "id": "nmdc:71dee7fa9a220e524595a3a5244d8e67", @@ -7911,20 +7946,12 @@ "description": "RFAM misc binding GFF file for gold:Gp0138733" }, { - "id": "nmdc:049fef6c097c89c561ecaf8c14b289f2", - "file_size_bytes": 48376318, - "md5_checksum": "049fef6c097c89c561ecaf8c14b289f2", - "name": "gold:Gp0138733_KO_EC GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0vd86/annotation/nmdc_mga0vd86_ko_ec.gff", - "description": "KO_EC GFF file for gold:Gp0138733" - }, - { - "id": 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gold:Gp0138746", - "data_object_type": "Structural Annotation GFF" + "id": "nmdc:0162b13864608d91c76156288c78d354", + "file_size_bytes": 13093357, + "md5_checksum": "0162b13864608d91c76156288c78d354", + "name": "gold:Gp0138746_EC TSV file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zt51/annotation/nmdc_mga0zt51_ec.tsv", + "description": "EC TSV file for gold:Gp0138746", + "data_object_type": "Annotation Enzyme Commission" }, { "id": "nmdc:a88a54a401f4416061f9b723cbe5a99b", @@ -15230,29 +15212,12 @@ "description": "SuperFam GFF file for gold:Gp0138746" }, { - "id": "nmdc:3efe965e66a322418941eadf98a4964c", - "file_size_bytes": 29657448, - "md5_checksum": "3efe965e66a322418941eadf98a4964c", - "name": "gold:Gp0138746_SMART GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0zt51/annotation/nmdc_mga0zt51_smart.gff", - "description": "SMART GFF file for gold:Gp0138746" - }, - { - "id": "nmdc:7cd8fdb30c38a525a05cc0acb7d4fe75", - "file_size_bytes": 107560304, - 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gold:Gp0138746", + "data_object_type": "Annotation KEGG Orthology" + }, + { + "id": "nmdc:3ee202c9076d6a998f81e4498749095f", + "file_size_bytes": 346567, + "md5_checksum": "3ee202c9076d6a998f81e4498749095f", + "name": "gold:Gp0138746_CRT GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zt51/annotation/nmdc_mga0zt51_crt.gff", + "description": "CRT GFF file for gold:Gp0138746" + }, + { + "id": "nmdc:aa011778de4d2f547524ed4eaf1747b8", + "file_size_bytes": 198847582, + "md5_checksum": "aa011778de4d2f547524ed4eaf1747b8", + "name": "gold:Gp0138746_Protein FAA", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zt51/annotation/nmdc_mga0zt51_proteins.faa", + "description": "Protein FAA for gold:Gp0138746", + "data_object_type": "Annotation Amino Acid FASTA" }, { "id": "nmdc:727f497180a97400c851111340846559", @@ -16136,14 +16136,6 @@ "description": "Filtered Reads for gold:Gp0138748", "data_object_type": "Filtered Sequencing Reads" }, - { - "id": 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"Kraken2 Taxonomic Classification" }, { "id": "nmdc:78972c7f2b3eb2c6ae4041ae696aae90", @@ -25966,13 +25958,21 @@ "data_object_type": "GOTTCHA2 Krona Plot" }, { - "id": "nmdc:6a8f3d5833feecd2ec2418cfc3ad5102", - "file_size_bytes": 2342327, - "md5_checksum": "6a8f3d5833feecd2ec2418cfc3ad5102", - "name": "gold:Gp0138750_Centrifuge Krona HTML report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/ReadbasedAnalysis/nmdc_mga0v998_centrifuge_krona.html", - "description": "Centrifuge Krona HTML report for gold:Gp0138750", - "data_object_type": "Centrifuge Krona Plot" + "id": "nmdc:d55beb8645eff57d8806666e570d2d3e", + "file_size_bytes": 3381035521, + "md5_checksum": "d55beb8645eff57d8806666e570d2d3e", + "name": "gold:Gp0138750_Centrifuge classification TSV report", + "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/ReadbasedAnalysis/nmdc_mga0v998_centrifuge_classification.tsv", + "description": "Centrifuge classification TSV report for gold:Gp0138750", + "data_object_type": "Centrifuge Taxonomic Classification" + }, + { + "id": "nmdc:fe7efd7d37ed3c916db73af90e6b4656", + "file_size_bytes": 1201, + "md5_checksum": "fe7efd7d37ed3c916db73af90e6b4656", + "name": "gold:Gp0138750_Gottcha2 TSV report", + "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/ReadbasedAnalysis/nmdc_mga0v998_gottcha2_report.tsv", + "description": "Gottcha2 TSV report for gold:Gp0138750" }, { "id": "nmdc:3d92c122124714a61cdedd87dc2e460d", @@ -25984,13 +25984,12 @@ "data_object_type": "Assembly Contigs" }, { - "id": "nmdc:108c62768293874eb901fa014d98c07a", - "file_size_bytes": 358019745, - "md5_checksum": "108c62768293874eb901fa014d98c07a", - "name": "gold:Gp0138750_Assembled scaffold fasta", - "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/assembly/nmdc_mga0v998_scaffolds.fna", - "description": "Assembled scaffold fasta for gold:Gp0138750", - "data_object_type": "Assembly Scaffolds" + "id": "nmdc:b9135feeee2c737cd11c9ff504e87689", + 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gold:Gp0138750" }, { - "id": "nmdc:539e7611cb5f4369f32e846112d35685", - "file_size_bytes": 174492225, - "md5_checksum": "539e7611cb5f4369f32e846112d35685", - "name": "gold:Gp0138750_Protein FAA", - "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/annotation/nmdc_mga0v998_proteins.faa", - "description": "Protein FAA for gold:Gp0138750", - "data_object_type": "Annotation Amino Acid FASTA" - }, - { - "id": "nmdc:820e8cdcfdb20475881246befac20b5d", - "file_size_bytes": 95976780, - "md5_checksum": "820e8cdcfdb20475881246befac20b5d", - "name": "gold:Gp0138750_COG GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/annotation/nmdc_mga0v998_cog.gff", - "description": "COG GFF file for gold:Gp0138750" - }, - { - "id": "nmdc:39211ac51085cf49b17f735a9badb3bb", - "file_size_bytes": 56285819, - "md5_checksum": "39211ac51085cf49b17f735a9badb3bb", - "name": "gold:Gp0138750_KO_EC GFF file", - "url": 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for gold:Gp0138750" }, { - "id": "nmdc:322de8109bec500b6e8a4ce32e248654", - "file_size_bytes": 60651, - "md5_checksum": "322de8109bec500b6e8a4ce32e248654", - "name": "gold:Gp0138750_RFAM rmRNA GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/annotation/nmdc_mga0v998_rfam_ncrna_tmrna.gff", - "description": "RFAM rmRNA GFF file for gold:Gp0138750" + "id": "nmdc:820e8cdcfdb20475881246befac20b5d", + "file_size_bytes": 95976780, + "md5_checksum": "820e8cdcfdb20475881246befac20b5d", + "name": "gold:Gp0138750_COG GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/annotation/nmdc_mga0v998_cog.gff", + "description": "COG GFF file for gold:Gp0138750" }, { "id": "nmdc:e1987a4c7fe19b1a38fd23160a305063", @@ -26135,12 +26102,20 @@ "data_object_type": "Functional Annotation GFF" }, { - "id": "nmdc:dbe6917a6b943cfa586cc8453ed3e8cd", - "file_size_bytes": 104682154, - "md5_checksum": "dbe6917a6b943cfa586cc8453ed3e8cd", - "name": "gold:Gp0138750_Cath FunFam GFF 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"https://data.microbiomedata.org/data/nmdc:mga0v998/annotation/nmdc_mga0v998_smart.gff", "description": "SMART GFF file for gold:Gp0138750" }, + { + "id": "nmdc:539e7611cb5f4369f32e846112d35685", + "file_size_bytes": 174492225, + "md5_checksum": "539e7611cb5f4369f32e846112d35685", + "name": "gold:Gp0138750_Protein FAA", + "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/annotation/nmdc_mga0v998_proteins.faa", + "description": "Protein FAA for gold:Gp0138750", + "data_object_type": "Annotation Amino Acid FASTA" + }, + { + "id": "nmdc:c7ebc2c733f940860c075c216bc0edc0", + "file_size_bytes": 311558, + "md5_checksum": "c7ebc2c733f940860c075c216bc0edc0", + "name": "gold:Gp0138750_CRT GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/annotation/nmdc_mga0v998_crt.gff", + "description": "CRT GFF file for gold:Gp0138750" + }, { "id": "nmdc:9b030203060e81edb8ea324dbd6b1ce9", "file_size_bytes": 93016081, @@ -26160,12 +26152,20 @@ "data_object_type": "Structural 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"description": "Genemark GFF file for gold:Gp0138750" }, { "id": "nmdc:08ccb3a3d80869578a39a51837498642", @@ -26175,15 +26175,6 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/annotation/nmdc_mga0v998_pfam.gff", "description": "PFAM GFF file for gold:Gp0138750" }, - { - "id": "nmdc:90764008f8ec0179b25654ea200774f5", - "file_size_bytes": 18329388, - "md5_checksum": "90764008f8ec0179b25654ea200774f5", - "name": "gold:Gp0138750_high-quality and medium-quality bins", - "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/MAGs/nmdc_mga0v998_hqmq_bin.zip", - "description": "high-quality and medium-quality bins for gold:Gp0138750", - "data_object_type": "Metagenome Bins" - }, { "id": "nmdc:277aa42284aacc782436f05b35763182", "file_size_bytes": 7612, @@ -26192,6 +26183,15 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0v998/MAGs/nmdc_mga0v998_checkm_qa.out", "description": "metabat2 bin checkm quality assessment result for gold:Gp0138750", "data_object_type": 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"data_object_type": "GOTTCHA2 Krona Plot" }, + { + "id": "nmdc:ac6d3b9fa77d411df771712fa82fdd9a", + "file_size_bytes": 3544923, + "md5_checksum": "ac6d3b9fa77d411df771712fa82fdd9a", + "name": "gold:Gp0208364_Kraken2 Krona HTML report", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/ReadbasedAnalysis/nmdc_mga0zn66_kraken2_krona.html", + "description": "Kraken2 Krona HTML report for gold:Gp0208364", + "data_object_type": "Kraken2 Krona Plot" + }, { "id": "nmdc:4f15ff004d666aec8af98763c326c38a", "file_size_bytes": 3770643722, @@ -47186,30 +47177,21 @@ "data_object_type": "Kraken2 Taxonomic Classification" }, { - "id": "nmdc:391138258e22a253a52fe8beb1e53eca", - "file_size_bytes": 628966, - "md5_checksum": "391138258e22a253a52fe8beb1e53eca", - "name": "gold:Gp0208364_Gottcha2 full TSV report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/ReadbasedAnalysis/nmdc_mga0zn66_gottcha2_report_full.tsv", - "description": "Gottcha2 full TSV report for gold:Gp0208364" - 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"description": "RFAM rmRNA GFF file for gold:Gp0208364" + "id": "nmdc:d39cd00c78689bfe7a71d5ab1d85a488", + "file_size_bytes": 1041665920, + "md5_checksum": "d39cd00c78689bfe7a71d5ab1d85a488", + "name": "gold:Gp0208364_Assembled scaffold fasta", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/assembly/nmdc_mga0zn66_scaffolds.fna", + "description": "Assembled scaffold fasta for gold:Gp0208364", + "data_object_type": "Assembly Scaffolds" }, { - "id": "nmdc:b18748254f460e87e4b6f953fe1c8f31", - "file_size_bytes": 250727239, - "md5_checksum": "b18748254f460e87e4b6f953fe1c8f31", - "name": "gold:Gp0208364_Structural annotation GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_structural_annotation.gff", - "description": "Structural annotation GFF file for gold:Gp0208364", - "data_object_type": "Structural Annotation GFF" + "id": "nmdc:cc1463e31531747a29e0ce44d928e4b5", + "file_size_bytes": 255458211, + "md5_checksum": 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"https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_cath_funfam.gff", + "description": "Cath FunFam GFF file for gold:Gp0208364" }, { "id": "nmdc:d1d1f6aded15e865f7ed9d424afb1dbd", @@ -47304,38 +47278,20 @@ "description": "tRNA GFF File for gold:Gp0208364" }, { - "id": "nmdc:5717d58eeb90aa04fd33c008f822cbe5", - "file_size_bytes": 31248001, - "md5_checksum": "5717d58eeb90aa04fd33c008f822cbe5", - "name": "gold:Gp0208364_EC TSV file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_ec.tsv", - "description": "EC TSV file for gold:Gp0208364", - "data_object_type": "Annotation Enzyme Commission" - }, - { - "id": "nmdc:c70672108eb548674fe99ed03b0057ec", - "file_size_bytes": 952696, - "md5_checksum": "c70672108eb548674fe99ed03b0057ec", - "name": "gold:Gp0208364_CRT GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_crt.gff", - "description": "CRT GFF file for gold:Gp0208364" - }, - { - 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"data_object_type": "Structural Annotation GFF" + }, + { + "id": "nmdc:5717d58eeb90aa04fd33c008f822cbe5", + "file_size_bytes": 31248001, + "md5_checksum": "5717d58eeb90aa04fd33c008f822cbe5", + "name": "gold:Gp0208364_EC TSV file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_ec.tsv", + "description": "EC TSV file for gold:Gp0208364", + "data_object_type": "Annotation Enzyme Commission" + }, + { + "id": "nmdc:1dd2da17bc18b1736c76ef19c1cdef55", + "file_size_bytes": 46944617, + "md5_checksum": "1dd2da17bc18b1736c76ef19c1cdef55", + "name": "gold:Gp0208364_KO TSV file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_ko.tsv", + "description": "KO TSV file for gold:Gp0208364", + "data_object_type": "Annotation KEGG Orthology" }, { "id": "nmdc:3150e0ea836a76269d5e3870b18527af", @@ -47385,6 +47361,30 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_ko_ec.gff", "description": "KO_EC GFF file for gold:Gp0208364" }, + { + "id": "nmdc:c70672108eb548674fe99ed03b0057ec", + "file_size_bytes": 952696, + "md5_checksum": "c70672108eb548674fe99ed03b0057ec", + "name": "gold:Gp0208364_CRT GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_crt.gff", + "description": "CRT GFF file for gold:Gp0208364" + }, + { + "id": "nmdc:c4a6941e5ad3c0218b7ffda43024a26f", + "file_size_bytes": 140133, + "md5_checksum": "c4a6941e5ad3c0218b7ffda43024a26f", + "name": "gold:Gp0208364_RFAM rmRNA GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/annotation/nmdc_mga0zn66_rfam_ncrna_tmrna.gff", + "description": "RFAM rmRNA GFF file for gold:Gp0208364" + }, + { + "id": "nmdc:420aa59100482ab4c4d8531c2c3ae72e", + "file_size_bytes": 444746504, + "md5_checksum": "420aa59100482ab4c4d8531c2c3ae72e", + "name": "gold:Gp0208364_Prodigal GFF file", + "url": 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"description": "high-quality and medium-quality bins for gold:Gp0208364", "data_object_type": "Metagenome Bins" + }, + { + "id": "nmdc:6cd292fcddd3e4d839d5f39ee189bbbd", + "file_size_bytes": 13148, + "md5_checksum": "6cd292fcddd3e4d839d5f39ee189bbbd", + "name": "gold:Gp0208364_metabat2 bin checkm quality assessment result", + "url": "https://data.microbiomedata.org/data/nmdc:mga0zn66/MAGs/nmdc_mga0zn66_checkm_qa.out", + "description": "metabat2 bin checkm quality assessment result for gold:Gp0208364", + "data_object_type": "CheckM Statistics" } ], "mags_activity_set": [ @@ -48992,15 +48992,6 @@ "file_size_bytes": 9999181156, "description": "Raw sequencer read data" }, - { - "id": "nmdc:37a9c8f31c8240c7a72233e33724dc18", - "file_size_bytes": 289, - "md5_checksum": "37a9c8f31c8240c7a72233e33724dc18", - "name": "gold:Gp0208365_Filtered Stats", - "url": "https://data.microbiomedata.org/data/nmdc:mga0qr49/qa/nmdc_mga0qr49_filterStats.txt", - "description": "Filtered Stats for gold:Gp0208365", - "data_object_type": "QC Statistics" - }, { "id": "nmdc:93c11e5c022730d2f3ba2b237abe5eac", "file_size_bytes": 9253036744, @@ -49011,21 +49002,21 @@ "data_object_type": "Filtered Sequencing Reads" }, { - "id": "nmdc:bd89f6fb8c30f35040400d527117f7c1", - "file_size_bytes": 4210, - "md5_checksum": "bd89f6fb8c30f35040400d527117f7c1", - "name": "gold:Gp0208365_Gottcha2 TSV report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0qr49/ReadbasedAnalysis/nmdc_mga0qr49_gottcha2_report.tsv", - "description": "Gottcha2 TSV report for gold:Gp0208365" + "id": "nmdc:37a9c8f31c8240c7a72233e33724dc18", + "file_size_bytes": 289, + "md5_checksum": "37a9c8f31c8240c7a72233e33724dc18", + "name": "gold:Gp0208365_Filtered Stats", + "url": "https://data.microbiomedata.org/data/nmdc:mga0qr49/qa/nmdc_mga0qr49_filterStats.txt", + "description": "Filtered Stats for gold:Gp0208365", + "data_object_type": "QC Statistics" }, { - "id": "nmdc:1584c99826b72d31e550a09dc839ce89", - 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gold:Gp0208365" + "id": "nmdc:c38c17414c5617274b1b1b1dd68fb940", + "file_size_bytes": 426491, + "md5_checksum": "c38c17414c5617274b1b1b1dd68fb940", + "name": "gold:Gp0208365_RFAM rRNA GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0qr49/annotation/nmdc_mga0qr49_rfam_rrna.gff", + "description": "RFAM rRNA GFF file for gold:Gp0208365" }, { "id": "nmdc:a285653b827d1932dbfaca7052020c69", @@ -49233,6 +49232,15 @@ "description": "KO TSV file for gold:Gp0208365", "data_object_type": "Annotation KEGG Orthology" }, + { + "id": "nmdc:75d91f30a28972f7560febfdfd3dcee7", + "file_size_bytes": 52120129, + "md5_checksum": "75d91f30a28972f7560febfdfd3dcee7", + "name": "gold:Gp0208365_EC TSV file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0qr49/annotation/nmdc_mga0qr49_ec.tsv", + "description": "EC TSV file for gold:Gp0208365", + "data_object_type": "Annotation Enzyme Commission" + }, { "id": "nmdc:85db960d516446b365ba5dd189888eb7", "file_size_bytes": 893868, @@ 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gold:Gp0208366" }, { - "id": "nmdc:a7c7d93a3012b0b0c9890131d15167e7", - "file_size_bytes": 367439561, - "md5_checksum": "a7c7d93a3012b0b0c9890131d15167e7", - "name": "gold:Gp0208366_SuperFam GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga01778/annotation/nmdc_mga01778_supfam.gff", - "description": "SuperFam GFF file for gold:Gp0208366" + "id": "nmdc:bfa01dabda89d421cf8c540c9c03d172", + "file_size_bytes": 78463954, + "md5_checksum": "bfa01dabda89d421cf8c540c9c03d172", + "name": "gold:Gp0208366_SMART GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga01778/annotation/nmdc_mga01778_smart.gff", + "description": "SMART GFF file for gold:Gp0208366" + }, + { + "id": "nmdc:bdf29a655d7835cedbde70ba9307e83d", + "file_size_bytes": 1884682, + "md5_checksum": "bdf29a655d7835cedbde70ba9307e83d", + "name": "gold:Gp0208366_tRNA GFF File", + "url": "https://data.microbiomedata.org/data/nmdc:mga01778/annotation/nmdc_mga01778_trna.gff", + "description": "tRNA GFF File 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gold:Gp0208371" }, { "id": "nmdc:cedec6a5585e1f6e000aeed9fd24dbfa", @@ -59283,6 +59256,33 @@ "description": "Kraken2 Krona HTML report for gold:Gp0208371", "data_object_type": "Kraken2 Krona Plot" }, + { + "id": "nmdc:2ca4588825f056c60678304f4ece7354", + "file_size_bytes": 262086, + "md5_checksum": "2ca4588825f056c60678304f4ece7354", + "name": "gold:Gp0208371_Centrifuge TSV report", + "url": "https://data.microbiomedata.org/data/nmdc:mga02973/ReadbasedAnalysis/nmdc_mga02973_centrifuge_report.tsv", + "description": "Centrifuge TSV report for gold:Gp0208371", + "data_object_type": "Centrifuge Classification Report" + }, + { + "id": "nmdc:c68c5efe3a3c690263e9f7b46d20c680", + "file_size_bytes": 3658664931, + "md5_checksum": "c68c5efe3a3c690263e9f7b46d20c680", + "name": "gold:Gp0208371_Kraken classification TSV report", + "url": "https://data.microbiomedata.org/data/nmdc:mga02973/ReadbasedAnalysis/nmdc_mga02973_kraken2_classification.tsv", + "description": "Kraken classification TSV report for gold:Gp0208371", + "data_object_type": "Kraken2 Taxonomic Classification" + }, + { + "id": "nmdc:44b662598ea9b8e73f3cc113a1700ac8", + "file_size_bytes": 593201, + "md5_checksum": "44b662598ea9b8e73f3cc113a1700ac8", + "name": "gold:Gp0208371_Kraken2 TSV report", + "url": "https://data.microbiomedata.org/data/nmdc:mga02973/ReadbasedAnalysis/nmdc_mga02973_kraken2_report.tsv", + "description": "Kraken2 TSV report for gold:Gp0208371", + "data_object_type": "Kraken2 Classification Report" + }, { "id": "nmdc:b067aacc722dec7f7d5bf6bcb0627dd8", "file_size_bytes": 105605892, @@ -59292,6 +59292,15 @@ "description": "Assembled AGP file for gold:Gp0208371", "data_object_type": "Assembly AGP" }, + { + "id": "nmdc:13569543ba23307e5be94771b7e840bc", + "file_size_bytes": 9200009050, + "md5_checksum": "13569543ba23307e5be94771b7e840bc", + "name": "gold:Gp0208371_Metagenome Alignment BAM file", + "url": 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fasta for gold:Gp0208371", "data_object_type": "Assembly Contigs" }, + { + "id": "nmdc:5bba5eb941d060d87a1f5b1347c29a83", + "file_size_bytes": 310378557, + "md5_checksum": "5bba5eb941d060d87a1f5b1347c29a83", + "name": "gold:Gp0208371_Cath FunFam GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga02973/annotation/nmdc_mga02973_cath_funfam.gff", + "description": "Cath FunFam GFF file for gold:Gp0208371" + }, { "id": "nmdc:32d3659ce57ef5809fdb6fc84d02ba39", "file_size_bytes": 308886284, @@ -59336,53 +59344,20 @@ "description": "COG GFF file for gold:Gp0208371" }, { - "id": "nmdc:67b3e809cb8767ebf44da1b759c8ae08", - "file_size_bytes": 363285449, - "md5_checksum": "67b3e809cb8767ebf44da1b759c8ae08", - "name": "gold:Gp0208371_SuperFam GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga02973/annotation/nmdc_mga02973_supfam.gff", - "description": "SuperFam GFF file for gold:Gp0208371" - }, - { - "id": "nmdc:3a1c7fcc24437141eb17989cdab4d783", - "file_size_bytes": 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"Structural annotation GFF file for gold:Gp0208371", - "data_object_type": "Structural Annotation GFF" + "id": "nmdc:fddbb285c0226dc713b04323a40a8ca6", + "file_size_bytes": 460422815, + "md5_checksum": "fddbb285c0226dc713b04323a40a8ca6", + "name": "gold:Gp0208371_Genemark GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga02973/annotation/nmdc_mga02973_genemark.gff", + "description": "Genemark GFF file for gold:Gp0208371" }, { "id": "nmdc:56641b6c0f434c87534ff1107a3e0465", @@ -59393,29 +59368,20 @@ "description": "CRT GFF file for gold:Gp0208371" }, { - "id": "nmdc:0c5e2e57fa9456e88fd5c8f7e0fbd3b3", - "file_size_bytes": 265995778, - "md5_checksum": "0c5e2e57fa9456e88fd5c8f7e0fbd3b3", - "name": "gold:Gp0208371_PFAM GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga02973/annotation/nmdc_mga02973_pfam.gff", - "description": "PFAM GFF file for gold:Gp0208371" - }, - { - "id": "nmdc:45ec22da38c22dfa46bf0274f78b8be4", - "file_size_bytes": 375604, - 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"file_size_bytes": 77627037, @@ -59468,12 +59468,12 @@ "description": "SMART GFF file for gold:Gp0208371" }, { - "id": "nmdc:fddbb285c0226dc713b04323a40a8ca6", - "file_size_bytes": 460422815, - "md5_checksum": "fddbb285c0226dc713b04323a40a8ca6", - "name": "gold:Gp0208371_Genemark GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga02973/annotation/nmdc_mga02973_genemark.gff", - "description": "Genemark GFF file for gold:Gp0208371" + "id": "nmdc:20cf06a8ccdd228fd8087348a1570d97", + "file_size_bytes": 171050, + "md5_checksum": "20cf06a8ccdd228fd8087348a1570d97", + "name": "gold:Gp0208371_RFAM rmRNA GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga02973/annotation/nmdc_mga02973_rfam_ncrna_tmrna.gff", + "description": "RFAM rmRNA GFF file for gold:Gp0208371" }, { "id": "nmdc:2791738948a70480aa1a11976b68557e", @@ -60445,21 +60445,13 @@ "data_object_type": "Kraken2 Krona Plot" }, { - "id": "nmdc:39aba2cd0681e634e5a856a1643ad65d", - "file_size_bytes": 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gold:Gp0208375" - }, { "id": "nmdc:64acf8adc1fa39c1e585fe6e7a3cf714", "file_size_bytes": 37169409, @@ -60665,23 +60624,6 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0en49/annotation/nmdc_mga0en49_tigrfam.gff", "description": "TigrFam GFF file for gold:Gp0208375" }, - { - "id": "nmdc:a14f04811a9f8f6587bb0151db3942c2", - "file_size_bytes": 300019275, - "md5_checksum": "a14f04811a9f8f6587bb0151db3942c2", - "name": "gold:Gp0208375_Structural annotation GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0en49/annotation/nmdc_mga0en49_structural_annotation.gff", - "description": "Structural annotation GFF file for gold:Gp0208375", - "data_object_type": "Structural Annotation GFF" - }, - { - "id": "nmdc:7416f3c5786f60b9552d769dc18f5ecb", - "file_size_bytes": 310151327, - "md5_checksum": "7416f3c5786f60b9552d769dc18f5ecb", - "name": "gold:Gp0208375_Cath FunFam GFF file", - "url": 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gold:Gp0208372" + "id": "nmdc:fb0f3c5ae9a8b10358f635ffa96d6b42", + "file_size_bytes": 959137, + "md5_checksum": "fb0f3c5ae9a8b10358f635ffa96d6b42", + "name": "gold:Gp0208372_RFAM misc binding GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0tp58/annotation/nmdc_mga0tp58_rfam_misc_bind_misc_feature_regulatory.gff", + "description": "RFAM misc binding GFF file for gold:Gp0208372" }, { "id": "nmdc:71d7b55970308d41e2bdd41a4df7d60d", @@ -62241,12 +62241,21 @@ "description": "SMART GFF file for gold:Gp0208372" }, { - "id": "nmdc:34b22dfe836c514d60dc9139f8e842b6", - "file_size_bytes": 164375, - "md5_checksum": "34b22dfe836c514d60dc9139f8e842b6", - "name": "gold:Gp0208372_RFAM rmRNA GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0tp58/annotation/nmdc_mga0tp58_rfam_ncrna_tmrna.gff", - "description": "RFAM rmRNA GFF file for gold:Gp0208372" + "id": "nmdc:8a5d516bc04d6a0c581d7e86ab6a5df6", + "file_size_bytes": 580922890, + "md5_checksum": 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gold:Gp0208377", "data_object_type": "Filtered Sequencing Reads" }, + { + "id": "nmdc:509cbd216ab75caea93f045f313d5f99", + "file_size_bytes": 264142, + "md5_checksum": "509cbd216ab75caea93f045f313d5f99", + "name": "gold:Gp0208377_Centrifuge TSV report", + "url": "https://data.microbiomedata.org/data/nmdc:mga0gf69/ReadbasedAnalysis/nmdc_mga0gf69_centrifuge_report.tsv", + "description": "Centrifuge TSV report for gold:Gp0208377", + "data_object_type": "Centrifuge Classification Report" + }, { "id": "nmdc:ede0ed26db514191367b0b58d983813d", "file_size_bytes": 2358553, @@ -67383,13 +67392,21 @@ "data_object_type": "Centrifuge Krona Plot" }, { - "id": "nmdc:f698ef97a5f22ea749033d9ab4457b89", - "file_size_bytes": 610032, - "md5_checksum": "f698ef97a5f22ea749033d9ab4457b89", - "name": "gold:Gp0208377_Kraken2 TSV report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0gf69/ReadbasedAnalysis/nmdc_mga0gf69_kraken2_report.tsv", - "description": "Kraken2 TSV report for gold:Gp0208377", - 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Annotation GFF" }, + { + "id": "nmdc:1cb3147a437ed92c93781b77294622c8", + "file_size_bytes": 389718510, + "md5_checksum": "1cb3147a437ed92c93781b77294622c8", + "name": "gold:Gp0208381_Genemark GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0kh66/annotation/nmdc_mga0kh66_genemark.gff", + "description": "Genemark GFF file for gold:Gp0208381" + }, { "id": "nmdc:fdf425db6cd1006efd98d034f6b3f775", "file_size_bytes": 28576053, @@ -75619,22 +75619,22 @@ "data_object_type": "Filtered Sequencing Reads" }, { - "id": "nmdc:91c860160ee3a88b2230d5de3909feb3", - "file_size_bytes": 263649, - "md5_checksum": "91c860160ee3a88b2230d5de3909feb3", - "name": "gold:Gp0213331_Centrifuge TSV report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0yv47/ReadbasedAnalysis/nmdc_mga0yv47_centrifuge_report.tsv", - "description": "Centrifuge TSV report for gold:Gp0213331", - "data_object_type": "Centrifuge Classification Report" + "id": "nmdc:b541e0ffe85bff612b7c3271a1625109", + 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gold:Gp0213333" + "id": "nmdc:62e1d2c55ba70885277fb29e57ebe14e", + "file_size_bytes": 1449070, + "md5_checksum": "62e1d2c55ba70885277fb29e57ebe14e", + "name": "gold:Gp0213333_tRNA GFF File", + "url": "https://data.microbiomedata.org/data/nmdc:mga0rg74/annotation/nmdc_mga0rg74_trna.gff", + "description": "tRNA GFF File for gold:Gp0213333" }, { - "id": "nmdc:8168bdb3c597dcdeb0aa8433f9ff22b2", - "file_size_bytes": 309967729, - "md5_checksum": "8168bdb3c597dcdeb0aa8433f9ff22b2", - "name": "gold:Gp0213333_Protein FAA", - "url": "https://data.microbiomedata.org/data/nmdc:mga0rg74/annotation/nmdc_mga0rg74_proteins.faa", - "description": "Protein FAA for gold:Gp0213333", - "data_object_type": "Annotation Amino Acid FASTA" + "id": "nmdc:43c2b2486136a7619bc02a4d3ed5e2bd", + "file_size_bytes": 46761746, + "md5_checksum": "43c2b2486136a7619bc02a4d3ed5e2bd", + "name": "gold:Gp0213333_SMART GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0rg74/annotation/nmdc_mga0rg74_smart.gff", + 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gold:Gp0213345" + }, + { + "id": "nmdc:fd025564e14719be1cfecf7d1366bb62", + "file_size_bytes": 23730100, + "md5_checksum": "fd025564e14719be1cfecf7d1366bb62", + "name": "gold:Gp0213345_EC TSV file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0tf79/annotation/nmdc_mga0tf79_ec.tsv", + "description": "EC TSV file for gold:Gp0213345", + "data_object_type": "Annotation Enzyme Commission" + }, + { + "id": "nmdc:26091c8d5fa8cf3775046535892daaf0", + "file_size_bytes": 270732, + "md5_checksum": "26091c8d5fa8cf3775046535892daaf0", + "name": "gold:Gp0213345_RFAM rRNA GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0tf79/annotation/nmdc_mga0tf79_rfam_rrna.gff", + "description": "RFAM rRNA GFF file for gold:Gp0213345" }, { "id": "nmdc:aab7460b53e4142d2f8c4ec69c9e25af", @@ -102661,20 +102677,20 @@ "description": "RFAM misc binding GFF file for gold:Gp0213345" }, { - "id": "nmdc:a074be16ed62b8fa82619432732722a3", - "file_size_bytes": 349703951, - "md5_checksum": 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"description": "Structural annotation GFF file for gold:Gp0213345", "data_object_type": "Structural Annotation GFF" }, + { + "id": "nmdc:5526bc0f5226a04ae861a1b092eacc2e", + "file_size_bytes": 370858752, + "md5_checksum": "5526bc0f5226a04ae861a1b092eacc2e", + "name": "gold:Gp0213345_Protein FAA", + "url": "https://data.microbiomedata.org/data/nmdc:mga0tf79/annotation/nmdc_mga0tf79_proteins.faa", + "description": "Protein FAA for gold:Gp0213345", + "data_object_type": "Annotation Amino Acid FASTA" + }, { "id": "nmdc:ac72326277a24e15de3eca0299f80610", "file_size_bytes": 789999, @@ -102727,12 +102735,12 @@ "description": "CRT GFF file for gold:Gp0213345" }, { - "id": "nmdc:1dc51f2d06de6fd49c2517f19a5918d4", - "file_size_bytes": 214539352, - "md5_checksum": "1dc51f2d06de6fd49c2517f19a5918d4", - "name": "gold:Gp0213345_Cath FunFam GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0tf79/annotation/nmdc_mga0tf79_cath_funfam.gff", - "description": "Cath FunFam GFF file for gold:Gp0213345" + "id": "nmdc:1e8fbe72694a0d02c82f7af2b7a1861a", + "file_size_bytes": 240472218, + "md5_checksum": "1e8fbe72694a0d02c82f7af2b7a1861a", + "name": "gold:Gp0213345_SuperFam GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0tf79/annotation/nmdc_mga0tf79_supfam.gff", + "description": "SuperFam GFF file for gold:Gp0213345" }, { "id": "nmdc:6d473a271f41bb6f433cea28d299fbbd", @@ -102743,20 +102751,29 @@ "description": "SMART GFF file for gold:Gp0213345" }, { - "id": "nmdc:df6e5b2691e77756f3f8a8a0637ca36d", - "file_size_bytes": 123313, - "md5_checksum": "df6e5b2691e77756f3f8a8a0637ca36d", - "name": "gold:Gp0213345_RFAM rmRNA GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0tf79/annotation/nmdc_mga0tf79_rfam_ncrna_tmrna.gff", - "description": "RFAM rmRNA GFF file for gold:Gp0213345" + "id": "nmdc:a074be16ed62b8fa82619432732722a3", + "file_size_bytes": 349703951, + "md5_checksum": "a074be16ed62b8fa82619432732722a3", + "name": 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Coverage BAM" }, + { + "id": "nmdc:d22adbc2f694c0fe06081271f2d70414", + "file_size_bytes": 42269178, + "md5_checksum": "d22adbc2f694c0fe06081271f2d70414", + "name": "gold:Gp0213350_Metagenome Contig Coverage Stats", + "url": "https://data.microbiomedata.org/data/nmdc:mga06d65/assembly/nmdc_mga06d65_covstats.txt", + "description": "Metagenome Contig Coverage Stats for gold:Gp0213350" + }, + { + "id": "nmdc:c26e242c85c84c4a551677d162630e9c", + "file_size_bytes": 131844130, + "md5_checksum": "c26e242c85c84c4a551677d162630e9c", + "name": "gold:Gp0213350_PFAM GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga06d65/annotation/nmdc_mga06d65_pfam.gff", + "description": "PFAM GFF file for gold:Gp0213350" + }, { "id": "nmdc:2185aeb3431945770c41c9c90773228a", "file_size_bytes": 140216068, @@ -104621,6 +104629,32 @@ "description": "Structural annotation GFF file for gold:Gp0213350", "data_object_type": "Structural Annotation GFF" }, + { + "id": 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report", + "url": "https://data.microbiomedata.org/data/nmdc:mga02p34/ReadbasedAnalysis/nmdc_mga02p34_gottcha2_krona.html", + "description": "Gottcha2 Krona HTML report for gold:Gp0213353", + "data_object_type": "GOTTCHA2 Krona Plot" }, { "id": "nmdc:29d7979ce172e99795e2ba9f5b27ee22", @@ -111157,15 +111157,6 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga02p34/ReadbasedAnalysis/nmdc_mga02p34_gottcha2_report.tsv", "description": "Gottcha2 TSV report for gold:Gp0213353" }, - { - "id": "nmdc:ebe16a3e4d650652f0a39e930872a158", - "file_size_bytes": 857103449, - "md5_checksum": "ebe16a3e4d650652f0a39e930872a158", - "name": "gold:Gp0213353_Assembled contigs fasta", - "url": "https://data.microbiomedata.org/data/nmdc:mga02p34/assembly/nmdc_mga02p34_contigs.fna", - "description": "Assembled contigs fasta for gold:Gp0213353", - "data_object_type": "Assembly Contigs" - }, { "id": "nmdc:5475a070df52f1702058521b8ebfdd81", "file_size_bytes": 67331566, @@ -111175,15 +111166,6 @@ 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"Gottcha2 full TSV report for gold:Gp0213366" + }, { "id": "nmdc:338a51da00bcde29704b45d83ca72b77", "file_size_bytes": 2115, @@ -143437,15 +143473,6 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0v125/ReadbasedAnalysis/nmdc_mga0v125_gottcha2_report.tsv", "description": "Gottcha2 TSV report for gold:Gp0213366" }, - { - "id": "nmdc:e62ccb864b04c2baca7414ef6492c477", - "file_size_bytes": 2354372, - "md5_checksum": "e62ccb864b04c2baca7414ef6492c477", - "name": "gold:Gp0213366_Centrifuge Krona HTML report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0v125/ReadbasedAnalysis/nmdc_mga0v125_centrifuge_krona.html", - "description": "Centrifuge Krona HTML report for gold:Gp0213366", - "data_object_type": "Centrifuge Krona Plot" - }, { "id": "nmdc:39fc17e9230b7fe2277c4ed72dc2461f", "file_size_bytes": 262192, @@ -143455,33 +143482,6 @@ "description": "Centrifuge TSV report for gold:Gp0213366", "data_object_type": "Centrifuge Classification Report" }, - { - "id": 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annotation GFF file for gold:Gp0213366", + "data_object_type": "Functional Annotation GFF" + }, + { + "id": "nmdc:e884c8cabf071bceb75dec821064e5ab", + "file_size_bytes": 48633646, + "md5_checksum": "e884c8cabf071bceb75dec821064e5ab", + "name": "gold:Gp0213366_SMART GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0v125/annotation/nmdc_mga0v125_smart.gff", + "description": "SMART GFF file for gold:Gp0213366" }, { "id": "nmdc:e5cdd8cd681ccc95d213b4f48f7c6099", @@ -143627,6 +143619,22 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0v125/annotation/nmdc_mga0v125_supfam.gff", "description": "SuperFam GFF file for gold:Gp0213366" }, + { + "id": "nmdc:59347f89b33779eb9d75480ba8f433bd", + "file_size_bytes": 155185124, + "md5_checksum": "59347f89b33779eb9d75480ba8f433bd", + "name": "gold:Gp0213366_PFAM GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0v125/annotation/nmdc_mga0v125_pfam.gff", + "description": "PFAM GFF file for gold:Gp0213366" + }, + { 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"https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_pfam.gff", - "description": "PFAM GFF file for gold:Gp0208380" + "id": "nmdc:48b2dec211a9824c41491abbe2a3a970", + "file_size_bytes": 100166346, + "md5_checksum": "48b2dec211a9824c41491abbe2a3a970", + "name": "gold:Gp0208380_SMART GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_smart.gff", + "description": "SMART GFF file for gold:Gp0208380" }, { - "id": "nmdc:df76b1232bb3c791dd771f9824495a40", - "file_size_bytes": 55864526, - "md5_checksum": "df76b1232bb3c791dd771f9824495a40", - "name": "gold:Gp0208380_EC TSV file", - "url": "https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_ec.tsv", - "description": "EC TSV file for gold:Gp0208380", - "data_object_type": "Annotation Enzyme Commission" + "id": "nmdc:f193b3aa402724d4f3ad6b3636e1a89c", + "file_size_bytes": 475573450, + "md5_checksum": "f193b3aa402724d4f3ad6b3636e1a89c", + "name": 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+ { + "id": "nmdc:381a1a6e5fbd59a2386400c0c664dd20", + "file_size_bytes": 83698534, + "md5_checksum": "381a1a6e5fbd59a2386400c0c664dd20", + "name": "gold:Gp0208380_KO TSV file", + "url": "https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_ko.tsv", + "description": "KO TSV file for gold:Gp0208380", + "data_object_type": "Annotation KEGG Orthology" + }, + { + "id": "nmdc:2dcbd68530370e00685f8b30b20b08fb", + "file_size_bytes": 409638293, + "md5_checksum": "2dcbd68530370e00685f8b30b20b08fb", + "name": "gold:Gp0208380_Cath FunFam GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_cath_funfam.gff", + "description": "Cath FunFam GFF file for gold:Gp0208380" }, { "id": "nmdc:dbdeeaad2fbb9650224c9169ab7e94b1", @@ -146929,46 +146954,21 @@ "description": "TigrFam GFF file for gold:Gp0208380" }, { - "id": "nmdc:be82ecb0abfd22ff863c2d68ab36e2f4", - "file_size_bytes": 270559846, - "md5_checksum": 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GFF" - }, - { - "id": "nmdc:34a1e7f3bb0aab9173dc737edbe91e7d", - "file_size_bytes": 2462537, - "md5_checksum": "34a1e7f3bb0aab9173dc737edbe91e7d", - "name": "gold:Gp0208380_tRNA GFF File", - "url": "https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_trna.gff", - "description": "tRNA GFF File for gold:Gp0208380" + "id": "nmdc:df76b1232bb3c791dd771f9824495a40", + "file_size_bytes": 55864526, + "md5_checksum": "df76b1232bb3c791dd771f9824495a40", + "name": "gold:Gp0208380_EC TSV file", + "url": "https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_ec.tsv", + "description": "EC TSV file for gold:Gp0208380", + "data_object_type": "Annotation Enzyme Commission" }, { - "id": "nmdc:410cb5de7e63a5e0d5c8f9b672053252", - "file_size_bytes": 772639566, - "md5_checksum": "410cb5de7e63a5e0d5c8f9b672053252", - "name": "gold:Gp0208380_Protein FAA", - "url": "https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_proteins.faa", - "description": "Protein FAA for gold:Gp0208380", - "data_object_type": "Annotation Amino Acid FASTA" + "id": "nmdc:4542683c6d730da02efd5bae4107babf", + "file_size_bytes": 626991125, + "md5_checksum": "4542683c6d730da02efd5bae4107babf", + "name": "gold:Gp0208380_Genemark GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga03295/annotation/nmdc_mga03295_genemark.gff", + "description": "Genemark GFF file for gold:Gp0208380" }, { "id": "nmdc:328375b6a823fa19b1d96762c383fc8a", @@ -146990,15 +146990,6 @@ "name": "gold:Gp0208380_metabat2 bin checkm quality assessment result", "description": "metabat2 bin checkm quality assessment result for gold:Gp0208380" }, - { - "id": "nmdc:31be7b9b32e0dffbc4caf64599fbe701", - "file_size_bytes": 8996, - "md5_checksum": "31be7b9b32e0dffbc4caf64599fbe701", - "name": "gold:Gp0208380_metabat2 bin checkm quality assessment result", - "url": "https://data.microbiomedata.org/data/nmdc:mga03295/MAGs/nmdc_mga03295_checkm_qa.out", - "description": "metabat2 bin checkm quality assessment result for gold:Gp0208380", - "data_object_type": "CheckM Statistics" - }, { "id": "nmdc:76f8131bebe2a014b5accac2cef83c14", "file_size_bytes": 13889880, @@ -147007,6 +146998,15 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga03295/MAGs/nmdc_mga03295_hqmq_bin.zip", "description": "high-quality and medium-quality bins for gold:Gp0208380", "data_object_type": "Metagenome Bins" + }, + { + "id": "nmdc:31be7b9b32e0dffbc4caf64599fbe701", + "file_size_bytes": 8996, + "md5_checksum": "31be7b9b32e0dffbc4caf64599fbe701", + "name": "gold:Gp0208380_metabat2 bin checkm quality assessment result", + "url": "https://data.microbiomedata.org/data/nmdc:mga03295/MAGs/nmdc_mga03295_checkm_qa.out", + "description": "metabat2 bin checkm quality assessment result for gold:Gp0208380", + "data_object_type": "CheckM Statistics" } ], "mags_activity_set": [ diff --git a/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_failed_record_dump.json b/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_failed_record_dump.json index e7bc580b..36c7e7b0 100644 --- a/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_failed_record_dump.json +++ b/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_failed_record_dump.json @@ -1,14 +1,6 @@ [ { "data_object_set": [ - { - "id": "nmdc:5f407fa0ab30bf4c41ed96f288084147", - "file_size_bytes": 404219, - "md5_checksum": "5f407fa0ab30bf4c41ed96f288084147", - "name": "gold:Gp0138728_Gottcha2 full TSV report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0k311/ReadbasedAnalysis/nmdc_mga0k311_gottcha2_report_full.tsv", - "description": "Gottcha2 full TSV report for gold:Gp0138728" - }, { "id": "nmdc:c8ed546d4bb69c4b6f122d933dcb79af", "file_size_bytes": 1008841987, @@ -18,15 +10,6 @@ "description": "Kraken classification TSV report for gold:Gp0138728", "data_object_type": "Kraken2 Taxonomic Classification" }, - { - "id": "nmdc:e798be205cffa0dc38d93310fdaed9ca", - 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gold:Gp0208352" }, { "id": "nmdc:d6367cc960b6b614ba6501bb3f0ac6b9", @@ -3018,14 +3008,6 @@ "description": "EC TSV file for gold:Gp0208352", "data_object_type": "Annotation Enzyme Commission" }, - { - "id": "nmdc:9abdceb6e6022724fc9f8cff0276fd01", - "file_size_bytes": 79560668, - "md5_checksum": "9abdceb6e6022724fc9f8cff0276fd01", - "name": "gold:Gp0208352_Protein FAA", - "url": "https://data.microbiomedata.org/data/nmdc_mta04n39/annotation/nmdc_mta04n39.faa", - "description": "Protein FAA for gold:Gp0208352" - }, { "id": "nmdc:f015add835a35c07ae9ede731c8477f3", "file_size_bytes": 44268999, @@ -3035,28 +3017,28 @@ "description": "Cath FunFam GFF file for gold:Gp0208352" }, { - "id": "nmdc:a3fdf59899653e519c125afc1bed4041", - "file_size_bytes": 27683819, - "md5_checksum": "a3fdf59899653e519c125afc1bed4041", - "name": "gold:Gp0208352_KO_EC GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta04n39/annotation/nmdc_mta04n39_ko_ec.gff", - "description": "KO_EC GFF file for 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Phylogeny tsv for gold:Gp0208352" }, { - "id": "nmdc:b40059796731adb54202c0604a51e5bb", - "file_size_bytes": 68070374, - "md5_checksum": "b40059796731adb54202c0604a51e5bb", - "name": "gold:Gp0208352_Genemark GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta04n39/annotation/nmdc_mta04n39_genemark.gff", - "description": "Genemark GFF file for gold:Gp0208352" + "id": "nmdc:a3fdf59899653e519c125afc1bed4041", + "file_size_bytes": 27683819, + "md5_checksum": "a3fdf59899653e519c125afc1bed4041", + "name": "gold:Gp0208352_KO_EC GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta04n39/annotation/nmdc_mta04n39_ko_ec.gff", + "description": "KO_EC GFF file for gold:Gp0208352" }, { "id": "nmdc:be65539cf891831943072dc9490b4bcc", @@ -3067,12 +3049,13 @@ "description": "CRT GFF file for gold:Gp0208352" }, { - "id": "nmdc:79aebdf95dae9b7bce7f9b915383da46", - "file_size_bytes": 24062706, - "md5_checksum": "79aebdf95dae9b7bce7f9b915383da46", - "name": 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"https://data.microbiomedata.org/data/nmdc_mta0tg76/metat_output/nmdc_mta0tg76_sense_out.json", "description": "Sense RPKM for gold:Gp0208351" + }, + { + "id": "nmdc:47017a8289f49deb37bb1de95c94ef67", + "file_size_bytes": 355325717, + "md5_checksum": "47017a8289f49deb37bb1de95c94ef67", + "name": "gold:Gp0208351_Anstisense RPKM", + "url": "https://data.microbiomedata.org/data/nmdc_mta0tg76/metat_output/nmdc_mta0tg76_antisense_out.json", + "description": "Anstisense RPKM for gold:Gp0208351" } ], "metagenome_annotation_activity_set": [ @@ -4828,37 +4828,12 @@ "description": "Assembled contigs fasta for gold:Gp0208358" }, { - "id": "nmdc:23d1f31eaec7a258b1bbf7603a6d0999", - "file_size_bytes": 140916389, - "md5_checksum": "23d1f31eaec7a258b1bbf7603a6d0999", - "name": "gold:Gp0208358_Functional annotation GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta07p39/annotation/nmdc_mta07p39_functional_annotation.gff", - "description": "Functional annotation GFF file for 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@@ -8564,38 +8572,20 @@ "description": "TigrFam GFF file for gold:Gp0208347" }, { - "id": "nmdc:1ecb1e1d685b42559e9e3fe9cddf27b2", - "file_size_bytes": 57009454, - "md5_checksum": "1ecb1e1d685b42559e9e3fe9cddf27b2", - "name": "gold:Gp0208347_Gene Phylogeny tsv", - "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_gene_phylogeny.tsv", - "description": "Gene Phylogeny tsv for gold:Gp0208347" - }, - { - "id": "nmdc:c911a02e0f09e31ab3d48be55e360fc8", - "file_size_bytes": 99351110, - "md5_checksum": "c911a02e0f09e31ab3d48be55e360fc8", - "name": "gold:Gp0208347_Genemark GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_genemark.gff", - "description": "Genemark GFF file for gold:Gp0208347" - }, - { - "id": "nmdc:1a5414d0d898710f6d4f50db6fdd84da", - "file_size_bytes": 5314540, - "md5_checksum": "1a5414d0d898710f6d4f50db6fdd84da", - "name": "gold:Gp0208347_EC TSV file", - "url": 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"https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_genemark.gff", + "description": "Genemark GFF file for gold:Gp0208347" + }, { "id": "nmdc:9f8ccb9d5c170ba3bfe16ab1363cba31", "file_size_bytes": 17751360, @@ -8639,36 +8630,37 @@ "description": "SMART GFF file for gold:Gp0208347" }, { - "id": "nmdc:a01b5b6cbc4437359277bad32c67d206", - "file_size_bytes": 69931, - "md5_checksum": "a01b5b6cbc4437359277bad32c67d206", - "name": "gold:Gp0208347_CRISPRS file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_crt.crisprs", - "description": "CRISPRS file for gold:Gp0208347" + "id": "nmdc:d830add00f1e7822a748f81e99edbc30", + "file_size_bytes": 122017769, + "md5_checksum": "d830add00f1e7822a748f81e99edbc30", + "name": "gold:Gp0208347_Functional annotation GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_functional_annotation.gff", + "description": "Functional annotation GFF file for gold:Gp0208347", + "data_object_type": "Functional Annotation GFF" }, { - "id": "nmdc:d0b3804e2acabdef04ceef794205a20d", - "file_size_bytes": 61242322, - "md5_checksum": "d0b3804e2acabdef04ceef794205a20d", - "name": "gold:Gp0208347_Cath FunFam GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_cath_funfam.gff", - "description": "Cath FunFam GFF file for gold:Gp0208347" + "id": "nmdc:9fc12b5283901dcdad532e3ec7d693c5", + "file_size_bytes": 3419225, + "md5_checksum": "9fc12b5283901dcdad532e3ec7d693c5", + "name": "gold:Gp0208347_RFAM rRNA GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_rfam_rrna.gff", + "description": "RFAM rRNA GFF file for gold:Gp0208347" }, { - "id": "nmdc:cb4d55ac9d2f2ad992a8b8e6c1bc6044", - "file_size_bytes": 111182029, - "md5_checksum": "cb4d55ac9d2f2ad992a8b8e6c1bc6044", - "name": "gold:Gp0208347_Protein FAA", - "url": 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"https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_rfam_ncrna_tmrna.gff", + "description": "RFAM rmRNA GFF file for gold:Gp0208347" }, { "id": "nmdc:845c84d682755143aa374ac6ba80901c", @@ -8678,30 +8670,6 @@ "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_crt.gff", "description": "CRT GFF file for gold:Gp0208347" }, - { - "id": "nmdc:3310c2597f0b1a8e1005ba1f8bba06da", - "file_size_bytes": 34916719, - "md5_checksum": "3310c2597f0b1a8e1005ba1f8bba06da", - "name": "gold:Gp0208347_Product Names tsv", - "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_product_names.tsv", - "description": "Product Names tsv for gold:Gp0208347" - }, - { - "id": "nmdc:524ded0fcc5e97934d7037ac5b757351", - "file_size_bytes": 514171, - "md5_checksum": "524ded0fcc5e97934d7037ac5b757351", - "name": "gold:Gp0208347_RFAM misc binding GFF file", - "url": 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"description": "KO_EC GFF file for gold:Gp0208347" + }, + { + "id": "nmdc:cb4d55ac9d2f2ad992a8b8e6c1bc6044", + "file_size_bytes": 111182029, + "md5_checksum": "cb4d55ac9d2f2ad992a8b8e6c1bc6044", + "name": "gold:Gp0208347_Protein FAA", + "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607.faa", + "description": "Protein FAA for gold:Gp0208347" + }, + { + "id": "nmdc:11f79bd87213158e47756ba99bcebf6d", + "file_size_bytes": 52437025, + "md5_checksum": "11f79bd87213158e47756ba99bcebf6d", + "name": "gold:Gp0208347_COG GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_cog.gff", + "description": "COG GFF file for gold:Gp0208347" + }, + { + "id": "nmdc:626ebca383501deebf357cd74168bf55", + "file_size_bytes": 816854, + "md5_checksum": "626ebca383501deebf357cd74168bf55", + "name": "gold:Gp0208347_tRNA GFF File", + "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_trna.gff", + "description": "tRNA GFF File for gold:Gp0208347" + }, + { + "id": "nmdc:a141bd880d53a9531b2a203321d85860", + "file_size_bytes": 11631602, + "md5_checksum": "a141bd880d53a9531b2a203321d85860", + "name": "gold:Gp0208347_KO TSV file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/annotation/nmdc_mta0r607_ko.tsv", + "description": "KO TSV file for gold:Gp0208347", + "data_object_type": "Annotation KEGG Orthology" }, { "id": "nmdc:1b0a42540b22fac68bd801cc0e2615e1", @@ -8742,6 +8734,14 @@ "name": "gold:Gp0208347_Anstisense RPKM", "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/metat_output/nmdc_mta0r607_antisense_out.json", "description": "Anstisense RPKM for gold:Gp0208347" + }, + { + "id": "nmdc:c46d12ccd3b0fc0c08e1182c56223c92", + "file_size_bytes": 249336096, + "md5_checksum": "c46d12ccd3b0fc0c08e1182c56223c92", + "name": "gold:Gp0208347_Sense RPKM", + "url": "https://data.microbiomedata.org/data/nmdc_mta0r607/metat_output/nmdc_mta0r607_sense_out.json", + "description": "Sense RPKM for gold:Gp0208347" } ], "metagenome_annotation_activity_set": [ diff --git a/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_re_ided_record_dump.json b/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_re_ided_record_dump.json index 4bf6d94c..f88d9fd8 100644 --- a/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_re_ided_record_dump.json +++ b/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_re_ided_record_dump.json @@ -2,7 +2,7 @@ { "data_object_set": [ { - "id": "nmdc:dobj-11-cwq6c530", + "id": "nmdc:dobj-11-mk8g0z48", "name": "10423.3.160502.GAGCTCA-TTGAGCT.fastq.gz", "description": "Raw sequencer read data", "file_size_bytes": 2660304705, @@ -10,169 +10,169 @@ "type": "nmdc:DataObject" }, { - "id": "nmdc:dobj-11-e1kaqq09", - "name": "nmdc_wfrqc-11-gxr6pa85.1_filtered.fastq.gz", + "id": "nmdc:dobj-11-tn50vn13", + "name": "nmdc_wfrqc-11-t1jppb58.1_filtered.fastq.gz", "description": "Filtered Reads for 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"type": "nmdc:DataObject" } ], "metagenome_assembly_set": [ { - "id": "nmdc:wfmgas-11-q1e85944.1", + "id": "nmdc:wfmgas-11-4xt4w481.1", "name": "Metagenome Assembly Activity for nmdc:omprc-11-2d16h818", "started_at_time": "2021-08-11T00:34:31+00:00", "ended_at_time": "2021-11-24T05:10:21+00:00", @@ -2944,14 +2944,14 @@ "execution_resource": "NERSC-Cori", "git_url": "https://github.com/microbiomedata/metaAssembly", "has_input": [ - "nmdc:dobj-11-18fy6960" + "nmdc:dobj-11-dh6nta86" ], "has_output": [ - "nmdc:dobj-11-9aarqk82", - "nmdc:dobj-11-1ydtah87", - "nmdc:dobj-11-gys0e436", - "nmdc:dobj-11-as007h52", - "nmdc:dobj-11-6gjfta33" + "nmdc:dobj-11-7ctr5m04", + "nmdc:dobj-11-a0eyb624", + "nmdc:dobj-11-zdtymy16", + "nmdc:dobj-11-y13xm982", + "nmdc:dobj-11-j3y3ky51" ], "type": "nmdc:MetagenomeAssembly", "part_of": [ @@ -2998,7 +2998,7 @@ "gold:Gp0138737" ], "has_output": [ - "nmdc:dobj-11-9h146810" + "nmdc:dobj-11-8h6jrf40" ], "mod_date": "2020-04-05", "ncbi_project_name": "Peatland 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"metagenome_assembly_set": [ { - "id": "nmdc:wfmgas-11-3net6944.1", + "id": "nmdc:wfmgas-11-7v1wmb09.1", "name": "Metagenome Assembly Activity for nmdc:omprc-11-62am2h65", "started_at_time": "2021-08-11T00:36:30+00:00", "ended_at_time": "2021-11-24T09:30:05+00:00", @@ -11444,14 +11444,14 @@ "execution_resource": "NERSC-Cori", "git_url": "https://github.com/microbiomedata/metaAssembly", "has_input": [ - "nmdc:dobj-11-nfqzd067" + "nmdc:dobj-11-tz13cq80" ], "has_output": [ - "nmdc:dobj-11-078hy784", - "nmdc:dobj-11-5x0g3412", - "nmdc:dobj-11-yzcym378", - "nmdc:dobj-11-0g6neg93", - "nmdc:dobj-11-ey947e27" + "nmdc:dobj-11-bscdhc80", + "nmdc:dobj-11-1c1b4e62", + "nmdc:dobj-11-tvvkta84", + "nmdc:dobj-11-vfx3w128", + "nmdc:dobj-11-p8ws8175" ], "type": "nmdc:MetagenomeAssembly", "part_of": [ @@ -11498,7 +11498,7 @@ "gold:Gp0208363" ], "has_output": [ - "nmdc:dobj-11-txr00q86" + "nmdc:dobj-11-d00c8y90" ], "mod_date": "2020-04-05", "ncbi_project_name": "Peatland microbial communities from 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"metagenome_assembly_set": [ { - "id": "nmdc:wfmgas-11-fx3h3666.1", + "id": "nmdc:wfmgas-11-7m7bax45.1", "name": "Metagenome Assembly Activity for nmdc:omprc-11-38h78d16", "started_at_time": "2021-08-11T00:36:40+00:00", "ended_at_time": "2021-11-24T08:13:50+00:00", @@ -17954,14 +17954,14 @@ "execution_resource": "NERSC-Cori", "git_url": "https://github.com/microbiomedata/metaAssembly", "has_input": [ - "nmdc:dobj-11-2n3jh002" + "nmdc:dobj-11-7nw8gz95" ], "has_output": [ - "nmdc:dobj-11-znrw5a36", - "nmdc:dobj-11-mc7rmz08", - "nmdc:dobj-11-1aafmr19", - "nmdc:dobj-11-rrqhm355", - "nmdc:dobj-11-xzzcga12" + "nmdc:dobj-11-kn14m327", + "nmdc:dobj-11-ezsq0v77", + "nmdc:dobj-11-shtjt105", + "nmdc:dobj-11-f8yea279", + "nmdc:dobj-11-1v8p3h27" ], "type": "nmdc:MetagenomeAssembly", "part_of": [ @@ -18008,7 +18008,7 @@ "gold:Gp0213334" ], "has_output": [ - "nmdc:dobj-11-7r3f1r85" + "nmdc:dobj-11-e7d85146" ], "mod_date": "2020-04-04", "ncbi_project_name": "Peatland microbial communities from SPRUCE 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"type": "nmdc:DataObject" } ], "metagenome_assembly_set": [ { - "id": "nmdc:wfmgas-11-5n8sf706.1", + "id": "nmdc:wfmgas-11-a4qcx092.1", "name": "Metagenome Assembly Activity for nmdc:omprc-11-kxct1j50", "started_at_time": "2021-08-11T00:35:54+00:00", "ended_at_time": "2021-11-24T05:36:52+00:00", @@ -23014,14 +23014,14 @@ "execution_resource": "NERSC-Cori", "git_url": "https://github.com/microbiomedata/metaAssembly", "has_input": [ - "nmdc:dobj-11-r3gcdh40" + "nmdc:dobj-11-yz74jp81" ], "has_output": [ - "nmdc:dobj-11-jdxjf868", - "nmdc:dobj-11-1pf5v802", - "nmdc:dobj-11-3wa42t10", - "nmdc:dobj-11-ed3bje50", - "nmdc:dobj-11-hgrr4w53" + "nmdc:dobj-11-0exweq22", + "nmdc:dobj-11-nhtmb615", + "nmdc:dobj-11-9gvy0f06", + "nmdc:dobj-11-h7nawe59", + "nmdc:dobj-11-ax3hbz66" ], "type": "nmdc:MetagenomeAssembly", "part_of": [ @@ -23068,7 +23068,7 @@ "gold:Gp0213350" ], "has_output": [ - "nmdc:dobj-11-h7ms5892" + "nmdc:dobj-11-4k60pk69" ], "mod_date": "2020-04-04", "ncbi_project_name": "Peatland 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"nmdc:dobj-11-pf33p919" ], "has_output": [ - "nmdc:dobj-11-fqctqq44", - "nmdc:dobj-11-hen7n454", - "nmdc:dobj-11-ntqsx566", - "nmdc:dobj-11-4wbesn40", - "nmdc:dobj-11-r2rkge47" + "nmdc:dobj-11-2qt78c35", + "nmdc:dobj-11-c1gx0a71", + "nmdc:dobj-11-rtm9xj50", + "nmdc:dobj-11-3rgq2w38", + "nmdc:dobj-11-v5ktv697" ], "type": "nmdc:MetagenomeAssembly", "part_of": [ @@ -31167,7 +31167,7 @@ "gold:Gp0208380" ], "has_output": [ - "nmdc:dobj-11-0q9xaa11" + "nmdc:dobj-11-awdnct89" ], "mod_date": "2021-12-23", "ncbi_project_name": "Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG", @@ -31186,7 +31186,7 @@ ], "read_qc_analysis_activity_set": [ { - "id": "nmdc:wfrqc-11-x4ggxb20.1", + "id": "nmdc:wfrqc-11-hyjagy05.1", "name": "Read QC Activity for nmdc:omprc-11-hxcj5q62", "started_at_time": "2021-09-11T16:05:49+00:00", "ended_at_time": "2021-12-04T07:29:42+00:00", @@ -31194,11 +31194,11 @@ "execution_resource": "NERSC-Cori", "git_url": "https://github.com/microbiomedata/ReadsQC", "has_input": [ - "nmdc:dobj-11-0q9xaa11" + "nmdc:dobj-11-awdnct89" ], "has_output": [ - "nmdc:dobj-11-057drk90", - "nmdc:dobj-11-se0y5v07" + "nmdc:dobj-11-pf33p919", + "nmdc:dobj-11-781rqz69" ], "type": "nmdc:ReadQcAnalysisActivity", "part_of": [ @@ -31213,7 +31213,7 @@ ], "read_based_taxonomy_analysis_activity_set": [ { - "id": "nmdc:wfrbt-11-ebdwjw61.1", + "id": "nmdc:wfrbt-11-2pa5m628.1", "name": "Readbased Taxonomy Analysis Activity for nmdc:omprc-11-hxcj5q62", "started_at_time": "2021-09-11T16:05:49+00:00", "ended_at_time": "2021-12-04T07:29:42+00:00", @@ -31221,18 +31221,18 @@ "execution_resource": "NERSC-Cori", "git_url": "https://github.com/microbiomedata/ReadbasedAnalysis", "has_input": [ - "nmdc:dobj-11-057drk90" + "nmdc:dobj-11-pf33p919" ], "has_output": [ - "nmdc:dobj-11-me7vgp91", - "nmdc:dobj-11-j5s3kx39", - "nmdc:dobj-11-fhyc3x56", - "nmdc:dobj-11-nn91hh39", - "nmdc:dobj-11-0cfm4e33", - "nmdc:dobj-11-prdg3h91", - "nmdc:dobj-11-z066pd07", - "nmdc:dobj-11-53gn2a30", - "nmdc:dobj-11-f0gyav98" + "nmdc:dobj-11-8zbcv205", + "nmdc:dobj-11-06b0zj76", + "nmdc:dobj-11-e538dh84", + "nmdc:dobj-11-4mtqq082", + "nmdc:dobj-11-6jyz5002", + "nmdc:dobj-11-d4bmpb66", + "nmdc:dobj-11-pn47ag60", + "nmdc:dobj-11-hj9ce275", + "nmdc:dobj-11-kmd3zy09" ], "type": "nmdc:ReadBasedTaxonomyAnalysisActivity", "part_of": [ diff --git a/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_extract_records.log b/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_extract_records.log index a8ebab93..24f72939 100644 --- a/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_extract_records.log +++ b/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_extract_records.log @@ -17,49 +17,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138727 INFO:root:found 1 records INFO:root:record: nmdc:b23607de481eac9d93776f1eb805e989, ReadBased Analysis Activity for nmdc:mga0ac72 +INFO:root:PassingDataObject: nmdc:11bee827a9abef578eb6610dc515fe04 INFO:root:PassingDataObject: nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 INFO:root:PassingDataObject: nmdc:a3d3f0f87d622ef5a110bb494b8c95f0 -INFO:root:PassingDataObject: nmdc:a5468325ed4b6b62bb116ff5142ff33d INFO:root:PassingDataObject: nmdc:fa401a0a97e73130ebfffcb25efef945 +INFO:root:PassingDataObject: nmdc:920790e781e64cd3eed3a32c521ffda7 INFO:root:PassingDataObject: nmdc:a1fd51f1e8db0648782ae6d29e583d5b +INFO:root:PassingDataObject: nmdc:a5468325ed4b6b62bb116ff5142ff33d INFO:root:PassingDataObject: nmdc:9a9b94f65b6f0af2208735238ddeb02c -INFO:root:PassingDataObject: nmdc:11bee827a9abef578eb6610dc515fe04 -INFO:root:PassingDataObject: nmdc:920790e781e64cd3eed3a32c521ffda7 INFO:root:PassingDataObject: nmdc:dce7c900d1ab453a1d95bd3979c7a017 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138727 INFO:root:found 1 records INFO:root:record: nmdc:b23607de481eac9d93776f1eb805e989, Assembly Activity for nmdc:mga0ac72 -INFO:root:PassingDataObject: nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de INFO:root:PassingDataObject: nmdc:3393ec1177ba82d1b16364a757a19173 +INFO:root:PassingDataObject: nmdc:623f8105bab94519da3d5a620b8bf6da INFO:root:PassingDataObject: nmdc:19023d87b3cdd9de7b40dbfc23e38c89 INFO:root:PassingDataObject: nmdc:582604e1df5f4337462b29ce34f2c02e -INFO:root:PassingDataObject: nmdc:623f8105bab94519da3d5a620b8bf6da +INFO:root:PassingDataObject: nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138727 INFO:root:found 1 records INFO:root:record: nmdc:b23607de481eac9d93776f1eb805e989, Annotation Activity for nmdc:mga0ac72 -INFO:root:PassingDataObject: nmdc:a28899511c3daa0b6aced1e11a875548 -INFO:root:PassingDataObject: nmdc:7fd3eb7eaae276c4822f5ce2de5a766c -INFO:root:PassingDataObject: nmdc:54ac7bde0d6b18bc7b1c0cafecd787d1 -INFO:root:PassingDataObject: nmdc:48f158b9bdcee0135669cd2c5a5ccc25 -INFO:root:PassingDataObject: nmdc:94edd28d2b641ba4f0e885ef0bc72b00 -INFO:root:PassingDataObject: nmdc:d998a307658a2c4f556721492358ad3d -INFO:root:PassingDataObject: nmdc:60e047950ea225f6ac8f677dbae225ed -INFO:root:PassingDataObject: nmdc:6d9f0228e3ff9158b6fbac9518ffaba6 -INFO:root:PassingDataObject: nmdc:a947acf706f9fc7539d50169d72e015f INFO:root:PassingDataObject: nmdc:f5d3de8796889a3d67fc83aeff5bd9f9 -INFO:root:PassingDataObject: nmdc:8c8bba0eee92f65c928071da947057c5 -INFO:root:PassingDataObject: nmdc:b42299646345d5801fe7b5a579f434cc +INFO:root:PassingDataObject: nmdc:cb256fb69ba245f710adeeaad8f4a16a INFO:root:PassingDataObject: nmdc:3ac986bab3bb921e02aadcada39a64cd +INFO:root:PassingDataObject: nmdc:60e047950ea225f6ac8f677dbae225ed +INFO:root:PassingDataObject: nmdc:6d9f0228e3ff9158b6fbac9518ffaba6 INFO:root:PassingDataObject: nmdc:2864325ac58cd499a110e262de3e892c +INFO:root:PassingDataObject: nmdc:d998a307658a2c4f556721492358ad3d INFO:root:PassingDataObject: nmdc:38cf4f39b765c7165cf4d4b72313d28d -INFO:root:PassingDataObject: nmdc:cb256fb69ba245f710adeeaad8f4a16a -INFO:root:PassingDataObject: nmdc:2a483528125e727ebb6b1c95269fcc97 INFO:root:PassingDataObject: nmdc:baad9903d8f79540001fdf080a5cd297 +INFO:root:PassingDataObject: nmdc:7fd3eb7eaae276c4822f5ce2de5a766c +INFO:root:PassingDataObject: nmdc:b42299646345d5801fe7b5a579f434cc +INFO:root:PassingDataObject: nmdc:a28899511c3daa0b6aced1e11a875548 +INFO:root:PassingDataObject: nmdc:94edd28d2b641ba4f0e885ef0bc72b00 +INFO:root:PassingDataObject: nmdc:2a483528125e727ebb6b1c95269fcc97 +INFO:root:PassingDataObject: nmdc:a947acf706f9fc7539d50169d72e015f INFO:root:PassingDataObject: nmdc:f6b443fde046b113b1bb33cf0b23ba3b +INFO:root:PassingDataObject: nmdc:54ac7bde0d6b18bc7b1c0cafecd787d1 +INFO:root:PassingDataObject: nmdc:48f158b9bdcee0135669cd2c5a5ccc25 +INFO:root:PassingDataObject: nmdc:8c8bba0eee92f65c928071da947057c5 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138727 @@ -85,57 +85,57 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, ReadBased Analysis Activity for nmdc:mga0k311 -INFO:root:PassingDataObject: nmdc:5f407fa0ab30bf4c41ed96f288084147 INFO:root:PassingDataObject: nmdc:c8ed546d4bb69c4b6f122d933dcb79af -INFO:root:PassingDataObject: nmdc:e798be205cffa0dc38d93310fdaed9ca INFO:root:PassingDataObject: nmdc:65ebc0e915b82640592a89c406f0465f +INFO:root:PassingDataObject: nmdc:b36e981c6d9031d6495c2691fe3523b1 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:a5fba8fca3b75c9e0b564a8e311adf46 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:a5fba8fca3b75c9e0b564a8e311adf46 -ERROR:root:FailedDataObject: nmdc:f61889342f732f8e12b5f818cfe02e7f, -ERROR:root:FailedDataObject: nmdc:b36e981c6d9031d6495c2691fe3523b1, +ERROR:root:FailedDataObject: nmdc:e798be205cffa0dc38d93310fdaed9ca, +ERROR:root:FailedDataObject: nmdc:5f407fa0ab30bf4c41ed96f288084147, ERROR:root:FailedDataObject: nmdc:b2ebb165844db26924a6697e7047988b, +ERROR:root:FailedDataObject: nmdc:f61889342f732f8e12b5f818cfe02e7f, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:a5fba8fca3b75c9e0b564a8e311adf46 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, ReadBased Analysis Activity for nmdc:mga0k311 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, Assembly Activity for nmdc:mga0k311 -INFO:root:PassingDataObject: nmdc:cb0d9e427179d63f3b38a5fc2eb53c02 +INFO:root:PassingDataObject: nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 INFO:root:PassingDataObject: nmdc:baacf8df3c4d301e397f4e2202cf68b1 INFO:root:PassingDataObject: nmdc:9a574224aebfebcc159a8eca738f9959 -INFO:root:PassingDataObject: nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 +INFO:root:PassingDataObject: nmdc:cb0d9e427179d63f3b38a5fc2eb53c02 INFO:root:PassingDataObject: nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, Annotation Activity for nmdc:mga0k311 +INFO:root:PassingDataObject: nmdc:bf7ae846284f9eba2f0e313d80159222 +INFO:root:PassingDataObject: nmdc:9d3e249a48788b5d6d4fe62d9ccd7fb7 +INFO:root:PassingDataObject: nmdc:c8ccaac0f4893c7340e2fe81fd3ac06b INFO:root:PassingDataObject: nmdc:ec8e0a71e4458ace5d93de19227f5270 INFO:root:PassingDataObject: nmdc:ff8e4ec55aee5652030e1692c961aec6 -INFO:root:PassingDataObject: nmdc:935f7b73ddcc7c443a303224a2996d1d -INFO:root:PassingDataObject: nmdc:bf7ae846284f9eba2f0e313d80159222 +INFO:root:PassingDataObject: nmdc:c265c0a18455d5ff859731448fad914d +INFO:root:PassingDataObject: nmdc:f544427535b0d9a31fd99ef78531092f INFO:root:PassingDataObject: nmdc:83d0d400353ac4e8cb1b09e37f7fb259 -INFO:root:PassingDataObject: nmdc:6949bbccc09f9d533e206199f928c7db -INFO:root:PassingDataObject: nmdc:e78c0eb8617e1a8f11e1fbee4350c943 -INFO:root:PassingDataObject: nmdc:938023547f2caad03223922dfc17f638 INFO:root:PassingDataObject: nmdc:d4d9a50170ed9791ddc9d4609d6e7eb5 -INFO:root:PassingDataObject: nmdc:20b14d6ade215c909859ed1e3d2b55ff -INFO:root:PassingDataObject: nmdc:f544427535b0d9a31fd99ef78531092f -INFO:root:PassingDataObject: nmdc:c265c0a18455d5ff859731448fad914d -INFO:root:PassingDataObject: nmdc:30757259de100a7b53499c95bbb12f7c INFO:root:PassingDataObject: nmdc:dedd158aeae5fe6355593fa8c117dfbf -INFO:root:PassingDataObject: nmdc:c8ccaac0f4893c7340e2fe81fd3ac06b +INFO:root:PassingDataObject: nmdc:9ba7a4c8fc71992eb1500790f2e9ae7b +INFO:root:PassingDataObject: nmdc:935f7b73ddcc7c443a303224a2996d1d +INFO:root:PassingDataObject: nmdc:6949bbccc09f9d533e206199f928c7db +INFO:root:PassingDataObject: nmdc:938023547f2caad03223922dfc17f638 INFO:root:PassingDataObject: nmdc:6e10cc7a09702f641efe27df767c73bc +INFO:root:PassingDataObject: nmdc:20b14d6ade215c909859ed1e3d2b55ff INFO:root:PassingDataObject: nmdc:1dbfe9b773cfaf29b1d2f95f98e184d2 -INFO:root:PassingDataObject: nmdc:9ba7a4c8fc71992eb1500790f2e9ae7b -INFO:root:PassingDataObject: nmdc:9d3e249a48788b5d6d4fe62d9ccd7fb7 +INFO:root:PassingDataObject: nmdc:30757259de100a7b53499c95bbb12f7c +INFO:root:PassingDataObject: nmdc:e78c0eb8617e1a8f11e1fbee4350c943 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, MAGs Analysis Activity for nmdc:mga0k311 -INFO:root:PassingDataObject: nmdc:0ae564e069e0eac70343b2892cf6063f INFO:root:PassingDataObject: nmdc:e387ccd75c4bfdbc6847fc54942e8f33 +INFO:root:PassingDataObject: nmdc:0ae564e069e0eac70343b2892cf6063f INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138728 @@ -154,49 +154,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138731 INFO:root:found 1 records INFO:root:record: nmdc:892b1e4dcd8dc413236a1e008577156b, ReadBased Analysis Activity for nmdc:mga02585 -INFO:root:PassingDataObject: nmdc:108ee81d2b63a8bfdcdffd57a2527449 -INFO:root:PassingDataObject: nmdc:0c58aef8eb55d4340c74407874ddd5d7 -INFO:root:PassingDataObject: nmdc:457fd17d3206e438c0923d5a476e4da6 +INFO:root:PassingDataObject: nmdc:3b149c1f7ee97c58fc80e9d1e846370c INFO:root:PassingDataObject: nmdc:9493a2d1a5bc0fa675a045672c2a0e81 INFO:root:PassingDataObject: nmdc:d6e2df5e68ee64e0b238c9933b63ab6f INFO:root:PassingDataObject: nmdc:f19bb4b52cad7f784386f91e155f999a -INFO:root:PassingDataObject: nmdc:f5f2240a59f252bd85b05dfea67935a0 INFO:root:PassingDataObject: nmdc:7ac7432d14596f5a627ec1335698f2a8 -INFO:root:PassingDataObject: nmdc:3b149c1f7ee97c58fc80e9d1e846370c +INFO:root:PassingDataObject: nmdc:108ee81d2b63a8bfdcdffd57a2527449 +INFO:root:PassingDataObject: nmdc:f5f2240a59f252bd85b05dfea67935a0 +INFO:root:PassingDataObject: nmdc:457fd17d3206e438c0923d5a476e4da6 +INFO:root:PassingDataObject: nmdc:0c58aef8eb55d4340c74407874ddd5d7 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138731 INFO:root:found 1 records INFO:root:record: nmdc:892b1e4dcd8dc413236a1e008577156b, Assembly Activity for nmdc:mga02585 -INFO:root:PassingDataObject: nmdc:74d5bc61e3be4595a9ad0df3bbd3797f -INFO:root:PassingDataObject: nmdc:53fd9f9a2c4c536c87a5019541a4fb0d -INFO:root:PassingDataObject: nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 INFO:root:PassingDataObject: nmdc:c8aedb23e2b4fa5c601e57f6910396da INFO:root:PassingDataObject: nmdc:47d64c1d12dbeb9f477a3d5136bb86c1 +INFO:root:PassingDataObject: nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 +INFO:root:PassingDataObject: nmdc:74d5bc61e3be4595a9ad0df3bbd3797f +INFO:root:PassingDataObject: nmdc:53fd9f9a2c4c536c87a5019541a4fb0d INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138731 INFO:root:found 1 records INFO:root:record: nmdc:892b1e4dcd8dc413236a1e008577156b, Annotation Activity for nmdc:mga02585 -INFO:root:PassingDataObject: nmdc:201b1581ddd15df11983f81189bd117d -INFO:root:PassingDataObject: nmdc:51ae744151fba7a6f5e048c6590f6cee -INFO:root:PassingDataObject: nmdc:f3ee42e9abc87232e9f56a06a4681bf8 -INFO:root:PassingDataObject: nmdc:66837869020e8e7b2c11fcfa9bab03c8 -INFO:root:PassingDataObject: nmdc:e831bf789934d693028cb3f0231c6792 -INFO:root:PassingDataObject: nmdc:c29a380d9a08d93143ff303542356a7e -INFO:root:PassingDataObject: nmdc:a59f9c807b367af8a8d00291a7f13ad0 -INFO:root:PassingDataObject: nmdc:35ae528f9a59e9bfa4c7f5075caa7c55 +INFO:root:PassingDataObject: nmdc:836146e1656dce189ac1f5128c647a0a INFO:root:PassingDataObject: nmdc:b46f4fd87e0e5a42f22b5649633408f7 -INFO:root:PassingDataObject: nmdc:e27e6ee3918aef9fcd5bfd6b81cb9369 -INFO:root:PassingDataObject: nmdc:f0e91d4dce7c6ded38b62ea25fc7a4f0 -INFO:root:PassingDataObject: nmdc:e91fe62aaf7d798d8d99d34c2378ae12 -INFO:root:PassingDataObject: nmdc:15f2c98af9be32cf3d1a273a32ca0e6a +INFO:root:PassingDataObject: nmdc:66837869020e8e7b2c11fcfa9bab03c8 INFO:root:PassingDataObject: nmdc:db35f8b1f1e3a99065fdb18be15c259e +INFO:root:PassingDataObject: nmdc:e91fe62aaf7d798d8d99d34c2378ae12 +INFO:root:PassingDataObject: nmdc:201b1581ddd15df11983f81189bd117d +INFO:root:PassingDataObject: nmdc:35ae528f9a59e9bfa4c7f5075caa7c55 +INFO:root:PassingDataObject: nmdc:7100fadd3a1f4f7e7fac0f4d5a2de839 INFO:root:PassingDataObject: nmdc:9a5200fc3667f94a26f9daff3e7896dc INFO:root:PassingDataObject: nmdc:ec9f120e0da93e8a8bc81fee028fe058 -INFO:root:PassingDataObject: nmdc:836146e1656dce189ac1f5128c647a0a -INFO:root:PassingDataObject: nmdc:7100fadd3a1f4f7e7fac0f4d5a2de839 +INFO:root:PassingDataObject: nmdc:c29a380d9a08d93143ff303542356a7e +INFO:root:PassingDataObject: nmdc:15f2c98af9be32cf3d1a273a32ca0e6a +INFO:root:PassingDataObject: nmdc:e27e6ee3918aef9fcd5bfd6b81cb9369 INFO:root:PassingDataObject: nmdc:cb704188f63145a2381fe3ac15385cfc +INFO:root:PassingDataObject: nmdc:f3ee42e9abc87232e9f56a06a4681bf8 +INFO:root:PassingDataObject: nmdc:e831bf789934d693028cb3f0231c6792 +INFO:root:PassingDataObject: nmdc:a59f9c807b367af8a8d00291a7f13ad0 +INFO:root:PassingDataObject: nmdc:f0e91d4dce7c6ded38b62ea25fc7a4f0 +INFO:root:PassingDataObject: nmdc:51ae744151fba7a6f5e048c6590f6cee INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138731 @@ -215,21 +215,21 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8f80860812e425d INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, Read QC Activity for nmdc:mga04g54 -INFO:root:PassingDataObject: nmdc:6ff08bff105c41ebee127d980006ba79 INFO:root:PassingDataObject: nmdc:ad6ccb8e44538b418e5a90a47a3a95b8 +INFO:root:PassingDataObject: nmdc:6ff08bff105c41ebee127d980006ba79 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, ReadBased Analysis Activity for nmdc:mga04g54 -INFO:root:PassingDataObject: nmdc:71f500ec517ea2cf44da02241e03c24b INFO:root:PassingDataObject: nmdc:822c7442bc7abceae5907c25950df957 -INFO:root:PassingDataObject: nmdc:401b5cf24d453cd157a486bbf3b99736 -INFO:root:PassingDataObject: nmdc:5023f7fe5f6d3ee8d904bed0099a7b20 -INFO:root:PassingDataObject: nmdc:1427b40ba7b82073434004c4ac58ce67 INFO:root:PassingDataObject: nmdc:159bcc899b358d4240c5f5e43dbee9b5 +INFO:root:PassingDataObject: nmdc:5023f7fe5f6d3ee8d904bed0099a7b20 INFO:root:PassingDataObject: nmdc:e6c87c6ae4e81e8620ed9b1db2089544 +INFO:root:PassingDataObject: nmdc:401b5cf24d453cd157a486bbf3b99736 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 +ERROR:root:FailedDataObject: nmdc:1427b40ba7b82073434004c4ac58ce67, +ERROR:root:FailedDataObject: nmdc:71f500ec517ea2cf44da02241e03c24b, ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, ReadBased Analysis Activity for nmdc:mga04g54 @@ -237,35 +237,35 @@ ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, Assembly Activity for nmdc:mga04g54 -INFO:root:PassingDataObject: nmdc:7711cd75bbcab369e2b44f73b2c01fcb +INFO:root:PassingDataObject: nmdc:4babbf701f66184084f500079d31a005 INFO:root:PassingDataObject: nmdc:0c2acd3eec955d6680787392cd3793c5 INFO:root:PassingDataObject: nmdc:4c5a5690d01093f5eb72862fb98e0988 -INFO:root:PassingDataObject: nmdc:4babbf701f66184084f500079d31a005 +INFO:root:PassingDataObject: nmdc:7711cd75bbcab369e2b44f73b2c01fcb INFO:root:PassingDataObject: nmdc:48c2645a14aecfee5bcbcd5e650a49ad INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, Annotation Activity for nmdc:mga04g54 -INFO:root:PassingDataObject: nmdc:b3a133a713e296c4b2fefa37428f267f -INFO:root:PassingDataObject: nmdc:1283ef0472b27c2ad4cdbb848dbd4bca -INFO:root:PassingDataObject: nmdc:88945c22930146a1465ad5dc13817a42 -INFO:root:PassingDataObject: nmdc:c619101979ea02f3fed22234edde0e94 -INFO:root:PassingDataObject: nmdc:91c32c903e7c61125fc8f6b8d9db9897 -INFO:root:PassingDataObject: nmdc:401de8c1e234359d698b9921d7dc525b -INFO:root:PassingDataObject: nmdc:8bd1119c07b414675365d01abb38413b -INFO:root:PassingDataObject: nmdc:06d49a3f34a35509e580740b9652b91d -INFO:root:PassingDataObject: nmdc:6257eca7b1724d73b982fb1d84a22627 -INFO:root:PassingDataObject: nmdc:04bb4f9347c8a8249ec0195efafc4c47 +INFO:root:PassingDataObject: nmdc:894b7c5ca83389dad3f974216d70d6d7 INFO:root:PassingDataObject: nmdc:1b2103ef2ab7424f55f251e422689008 +INFO:root:PassingDataObject: nmdc:04bb4f9347c8a8249ec0195efafc4c47 INFO:root:PassingDataObject: nmdc:c4530d8ecb4eb32e16a730d24cc28204 INFO:root:PassingDataObject: nmdc:e4c3461c1000a64d6a4634b4892164bb -INFO:root:PassingDataObject: nmdc:3913258d4842472c903ed41681e4c493 INFO:root:PassingDataObject: nmdc:c806670f529a8fdbef0cfd89123d7f00 -INFO:root:PassingDataObject: nmdc:0ecd7301a9a005cbc7b03d47b17b2ef3 +INFO:root:PassingDataObject: nmdc:3913258d4842472c903ed41681e4c493 +INFO:root:PassingDataObject: nmdc:88945c22930146a1465ad5dc13817a42 INFO:root:PassingDataObject: nmdc:7a33690f2e3c02320075d1bf104d4a62 -INFO:root:PassingDataObject: nmdc:894b7c5ca83389dad3f974216d70d6d7 +INFO:root:PassingDataObject: nmdc:91c32c903e7c61125fc8f6b8d9db9897 +INFO:root:PassingDataObject: nmdc:b3a133a713e296c4b2fefa37428f267f +INFO:root:PassingDataObject: nmdc:1283ef0472b27c2ad4cdbb848dbd4bca +INFO:root:PassingDataObject: nmdc:c619101979ea02f3fed22234edde0e94 +INFO:root:PassingDataObject: nmdc:8bd1119c07b414675365d01abb38413b INFO:root:PassingDataObject: nmdc:d9564fe3331cd74e58ad2b669cfa0a73 +INFO:root:PassingDataObject: nmdc:0ecd7301a9a005cbc7b03d47b17b2ef3 +INFO:root:PassingDataObject: nmdc:06d49a3f34a35509e580740b9652b91d +INFO:root:PassingDataObject: nmdc:401de8c1e234359d698b9921d7dc525b +INFO:root:PassingDataObject: nmdc:6257eca7b1724d73b982fb1d84a22627 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138730 @@ -284,63 +284,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:52c9e32cf184310 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, Read QC Activity for nmdc:mga0zv48 -INFO:root:PassingDataObject: nmdc:42ea257e18361687ddf5a1c561971f3e INFO:root:PassingDataObject: nmdc:8892ad845b7a08506e97587ab0219691 +INFO:root:PassingDataObject: nmdc:42ea257e18361687ddf5a1c561971f3e INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, ReadBased Analysis Activity for nmdc:mga0zv48 +INFO:root:PassingDataObject: nmdc:78ee66b725142022b978b88954280a9d +INFO:root:PassingDataObject: nmdc:c1dfc047ba2e0f5eb215770777e96581 INFO:root:PassingDataObject: nmdc:73cdf01b96a864c8af6b6404c9e2c557 -INFO:root:PassingDataObject: nmdc:d558a4ade655a4995104fcf89a97fdfa -INFO:root:PassingDataObject: nmdc:673fd43b0ba6af4a04221b7553288e3c +INFO:root:PassingDataObject: nmdc:170d1ae61e822af33e8808f9f579e702 INFO:root:PassingDataObject: nmdc:c1149272190dabdc7eb40ae4dad2151e INFO:root:PassingDataObject: nmdc:cfcf2defaa1760ebbb3f41e479d854ad +INFO:root:PassingDataObject: nmdc:d558a4ade655a4995104fcf89a97fdfa +INFO:root:PassingDataObject: nmdc:673fd43b0ba6af4a04221b7553288e3c INFO:root:PassingDataObject: nmdc:00cf10012ed2ab5fd30e4af4c45aa506 -INFO:root:PassingDataObject: nmdc:170d1ae61e822af33e8808f9f579e702 -INFO:root:PassingDataObject: nmdc:78ee66b725142022b978b88954280a9d -INFO:root:PassingDataObject: nmdc:c1dfc047ba2e0f5eb215770777e96581 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, Assembly Activity for nmdc:mga0zv48 -INFO:root:PassingDataObject: nmdc:c16092240ebabbe0ac347cb8c6a3561f INFO:root:PassingDataObject: nmdc:519e8feebab80f5ca632f919651a68b5 INFO:root:PassingDataObject: nmdc:fc0eb020cbf500b589498152428c5249 INFO:root:PassingDataObject: nmdc:710bafb899ee5b54d745c5f8f10178b8 +INFO:root:PassingDataObject: nmdc:c16092240ebabbe0ac347cb8c6a3561f INFO:root:PassingDataObject: nmdc:25bf97ed153656858b43652a17ee3744 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, Annotation Activity for nmdc:mga0zv48 -INFO:root:PassingDataObject: nmdc:ced27e756304ece15199f118c8fa15d9 -INFO:root:PassingDataObject: nmdc:27e608b0794f4d6612a43ae249f9424b INFO:root:PassingDataObject: nmdc:c2bd07ecfa8a85ed6f51b0ce3351e2e8 -INFO:root:PassingDataObject: nmdc:609d7f10e58ec42509d6c17ca0ab4129 +INFO:root:PassingDataObject: nmdc:497b858353cb8110f3ac52e79ecf38fa +INFO:root:PassingDataObject: nmdc:ced27e756304ece15199f118c8fa15d9 +INFO:root:PassingDataObject: nmdc:788640dc00d08db8319e8e01ba53fffe INFO:root:PassingDataObject: nmdc:8b7c2e0457c2641d46b6b86f3c6042fe -INFO:root:PassingDataObject: nmdc:d13ff73aaf8c761aebad031e9b49a1df +INFO:root:PassingDataObject: nmdc:7e974b0d2771dc21da1f503222168dc1 INFO:root:PassingDataObject: nmdc:898d8a5ca7c5c6d560a9b3748346d609 -INFO:root:PassingDataObject: nmdc:d53db44b2f7a44f18a72e4e8a354aeb8 -INFO:root:PassingDataObject: nmdc:1cb1897c5a34ab051abc0f95815faf1d +INFO:root:PassingDataObject: nmdc:27e608b0794f4d6612a43ae249f9424b +INFO:root:PassingDataObject: nmdc:265b8eedbc092ab5f37706306945ef3b INFO:root:PassingDataObject: nmdc:16655c802441f30dfcf9a19196b06492 -INFO:root:PassingDataObject: nmdc:497b858353cb8110f3ac52e79ecf38fa -INFO:root:PassingDataObject: nmdc:7e974b0d2771dc21da1f503222168dc1 +INFO:root:PassingDataObject: nmdc:d13ff73aaf8c761aebad031e9b49a1df +INFO:root:PassingDataObject: nmdc:46c56308de0e8f522a582171a9b24135 +INFO:root:PassingDataObject: nmdc:4d1c6f9f3fc5064a25890cf21c3d994f INFO:root:PassingDataObject: nmdc:220ef9e614affdbecd735a7776de5c1f -INFO:root:PassingDataObject: nmdc:d3cf66a3a9c21bb3135675af703ceec5 +INFO:root:PassingDataObject: nmdc:1cb1897c5a34ab051abc0f95815faf1d +INFO:root:PassingDataObject: nmdc:d53db44b2f7a44f18a72e4e8a354aeb8 INFO:root:PassingDataObject: nmdc:dd6023a23cb1f8a74eecb8b45df6f172 -INFO:root:PassingDataObject: nmdc:4d1c6f9f3fc5064a25890cf21c3d994f -INFO:root:PassingDataObject: nmdc:788640dc00d08db8319e8e01ba53fffe -INFO:root:PassingDataObject: nmdc:46c56308de0e8f522a582171a9b24135 -INFO:root:PassingDataObject: nmdc:265b8eedbc092ab5f37706306945ef3b +INFO:root:PassingDataObject: nmdc:609d7f10e58ec42509d6c17ca0ab4129 +INFO:root:PassingDataObject: nmdc:d3cf66a3a9c21bb3135675af703ceec5 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, MAGs Analysis Activity for nmdc:mga0zv48 -INFO:root:PassingDataObject: nmdc:4004239dfad7b245d348c204229174ee INFO:root:PassingDataObject: nmdc:cdacb0d34d64ac9c38ba6bca688e0ca7 +INFO:root:PassingDataObject: nmdc:4004239dfad7b245d348c204229174ee INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138729 @@ -352,63 +352,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:754dde7a211a1cd INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, Read QC Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:976360d3303c62ead30c78611545360b INFO:root:PassingDataObject: nmdc:b2aacef76b2233c11c9b78d9cdd8490f +INFO:root:PassingDataObject: nmdc:976360d3303c62ead30c78611545360b INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, ReadBased Analysis Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:038da6464f3c29fa2dd9f67041a9b32f -INFO:root:PassingDataObject: nmdc:ef970fcebe1b3873ea2c158b9b6cd19e -INFO:root:PassingDataObject: nmdc:0e979e1b9c4f241085492eab236b2829 INFO:root:PassingDataObject: nmdc:d097453c5bd6aca2e844c7836f19dcfa -INFO:root:PassingDataObject: nmdc:3cf637d814c9beb9a726b1ba61b44b75 -INFO:root:PassingDataObject: nmdc:31a7903e5c86cbe82392986253615bcf INFO:root:PassingDataObject: nmdc:14265744b93c11fc6ba858781cb48c88 +INFO:root:PassingDataObject: nmdc:31a7903e5c86cbe82392986253615bcf +INFO:root:PassingDataObject: nmdc:ef970fcebe1b3873ea2c158b9b6cd19e INFO:root:PassingDataObject: nmdc:54e0ddea48ee8d813764492555b0ecee +INFO:root:PassingDataObject: nmdc:038da6464f3c29fa2dd9f67041a9b32f +INFO:root:PassingDataObject: nmdc:3cf637d814c9beb9a726b1ba61b44b75 +INFO:root:PassingDataObject: nmdc:0e979e1b9c4f241085492eab236b2829 INFO:root:PassingDataObject: nmdc:21b08100a7f2d915a81862b906c6ae3b INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, Assembly Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:dc9d10f32066256bc9f37e6769bd21f5 +INFO:root:PassingDataObject: nmdc:53e156196225b31e3a13394345c3623a INFO:root:PassingDataObject: nmdc:c315d571185b157f596d9a21884aa537 +INFO:root:PassingDataObject: nmdc:dc9d10f32066256bc9f37e6769bd21f5 INFO:root:PassingDataObject: nmdc:240379c705c2598b90752197e2aa8989 INFO:root:PassingDataObject: nmdc:9301ff56d934a5547d16b3872a8a7bd1 -INFO:root:PassingDataObject: nmdc:53e156196225b31e3a13394345c3623a INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, Annotation Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:eebbbec7797f1d67338af282df8fd234 -INFO:root:PassingDataObject: nmdc:ff6b4846737b724214d06ba348df6210 -INFO:root:PassingDataObject: nmdc:1630909c2bc37b0576f920c3673b718d -INFO:root:PassingDataObject: nmdc:633ac08b6d72f927db1d912b890fb420 -INFO:root:PassingDataObject: nmdc:d6010675e1e2a65f7329498c43784d88 -INFO:root:PassingDataObject: nmdc:1e2b2b43c746d42aa754b1ba2b592563 +INFO:root:PassingDataObject: nmdc:74ed37c1a81bf5724e05340a4ccf10c0 INFO:root:PassingDataObject: nmdc:1277be4067074f36866443a88a4eca9b -INFO:root:PassingDataObject: nmdc:dac0038746c5a9c86a37eb83ff4dd52d +INFO:root:PassingDataObject: nmdc:4a9219bb2c7fd51c85383942618e9582 +INFO:root:PassingDataObject: nmdc:1e2b2b43c746d42aa754b1ba2b592563 +INFO:root:PassingDataObject: nmdc:6b3388eebf5bf86ed4f1c1cad9910082 +INFO:root:PassingDataObject: nmdc:1630909c2bc37b0576f920c3673b718d INFO:root:PassingDataObject: nmdc:34187ce4664773e8d071ea68f8a1eb11 -INFO:root:PassingDataObject: nmdc:a7a29af1557903ab7fa826ce30a3cbc1 +INFO:root:PassingDataObject: nmdc:633ac08b6d72f927db1d912b890fb420 +INFO:root:PassingDataObject: nmdc:7a5d3ddf66750a0c1d394497b23d3b62 +INFO:root:PassingDataObject: nmdc:485f886584685423b0d2c2b6ed297f6a INFO:root:PassingDataObject: nmdc:d92f05e589695962be06bfbce449dcd0 -INFO:root:PassingDataObject: nmdc:3e08b758d13ca176dbd38d71630fbbb0 INFO:root:PassingDataObject: nmdc:6b7f27a57e56a88dfc73581d054a3a95 +INFO:root:PassingDataObject: nmdc:eebbbec7797f1d67338af282df8fd234 +INFO:root:PassingDataObject: nmdc:dac0038746c5a9c86a37eb83ff4dd52d +INFO:root:PassingDataObject: nmdc:a7a29af1557903ab7fa826ce30a3cbc1 +INFO:root:PassingDataObject: nmdc:d6010675e1e2a65f7329498c43784d88 INFO:root:PassingDataObject: nmdc:ad9f1240cd86e0d0d1aae08e13e74fd5 -INFO:root:PassingDataObject: nmdc:4a9219bb2c7fd51c85383942618e9582 -INFO:root:PassingDataObject: nmdc:7a5d3ddf66750a0c1d394497b23d3b62 -INFO:root:PassingDataObject: nmdc:6b3388eebf5bf86ed4f1c1cad9910082 -INFO:root:PassingDataObject: nmdc:74ed37c1a81bf5724e05340a4ccf10c0 -INFO:root:PassingDataObject: nmdc:485f886584685423b0d2c2b6ed297f6a +INFO:root:PassingDataObject: nmdc:3e08b758d13ca176dbd38d71630fbbb0 +INFO:root:PassingDataObject: nmdc:ff6b4846737b724214d06ba348df6210 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, MAGs Analysis Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:7b99e4b41fe8c3f261296375f81e89c7 INFO:root:PassingDataObject: nmdc:3697b63f4a03482975a7246519524574 +INFO:root:PassingDataObject: nmdc:7b99e4b41fe8c3f261296375f81e89c7 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138734 @@ -427,56 +427,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, ReadBased Analysis Activity for nmdc:mga0s123 +INFO:root:PassingDataObject: nmdc:11cac1e08774c7809b9b8b1e44b251fd +INFO:root:PassingDataObject: nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 +INFO:root:PassingDataObject: nmdc:3a81e8a2e7369b8fbea40daf94e7238d +INFO:root:PassingDataObject: nmdc:605c505e6eb56aa78231f4adec6c6677 INFO:root:PassingDataObject: nmdc:0ef4135167361ad749a7733e5861c8c6 INFO:root:PassingDataObject: nmdc:86bbaf4690e2435bbfff1e3fa037e3b1 -INFO:root:PassingDataObject: nmdc:3a81e8a2e7369b8fbea40daf94e7238d +INFO:root:PassingDataObject: nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 INFO:root:PassingDataObject: nmdc:6935cee3be218ffa94d2b39f92f19f9f INFO:root:PassingDataObject: nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 -INFO:root:PassingDataObject: nmdc:605c505e6eb56aa78231f4adec6c6677 -INFO:root:PassingDataObject: nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 -INFO:root:PassingDataObject: nmdc:11cac1e08774c7809b9b8b1e44b251fd -INFO:root:PassingDataObject: nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, Assembly Activity for nmdc:mga0s123 INFO:root:PassingDataObject: nmdc:04c4cbeb14a1521973e441e3bf63c6f0 -INFO:root:PassingDataObject: nmdc:47c2916418a6cf166df77b0ae1163787 -INFO:root:PassingDataObject: nmdc:7d11c1515e21c03b397833054bbfc6d2 INFO:root:PassingDataObject: nmdc:27447a319e39a9f2e1284dddb9bc57bb +INFO:root:PassingDataObject: nmdc:7d11c1515e21c03b397833054bbfc6d2 INFO:root:PassingDataObject: nmdc:31755609cea771c4ffd9cd27e3af227f +INFO:root:PassingDataObject: nmdc:47c2916418a6cf166df77b0ae1163787 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, Annotation Activity for nmdc:mga0s123 -INFO:root:PassingDataObject: nmdc:024bb6cf27ee5e46e1f301c54a79a6f9 -INFO:root:PassingDataObject: nmdc:1e6e050f63216068ff7cf20faf6fdafb -INFO:root:PassingDataObject: nmdc:a87dca20350c928a9abad3ce9f069a60 -INFO:root:PassingDataObject: nmdc:80a14ea7ce007b6ca9a2c9df02015bd7 -INFO:root:PassingDataObject: nmdc:9c607b9ed1ae683a824d88947fb3e610 -INFO:root:PassingDataObject: nmdc:d6700cc63d980884450f32d900502b4a -INFO:root:PassingDataObject: nmdc:dfb4abeda1906d99fd4b51a1957c031c -INFO:root:PassingDataObject: nmdc:e622746f292b7a9b926d531836a7974c +INFO:root:PassingDataObject: nmdc:4d2b5ed98e8070a9b60d12b0e7b37985 +INFO:root:PassingDataObject: nmdc:6dbb5dfe3791e1de5d7e94267af87b67 INFO:root:PassingDataObject: nmdc:0dcb23595a4b98514289e8d0dc81699c -INFO:root:PassingDataObject: nmdc:d680fa9c8d786634c8d6717be629ab2c INFO:root:PassingDataObject: nmdc:745634b3500e92f9a692989a13bf4753 -INFO:root:PassingDataObject: nmdc:6dbb5dfe3791e1de5d7e94267af87b67 -INFO:root:PassingDataObject: nmdc:b1554b516784dbec8e67e9d3215ae136 -INFO:root:PassingDataObject: nmdc:dcac9187a9ef976e7260043681d3630f -INFO:root:PassingDataObject: nmdc:4d2b5ed98e8070a9b60d12b0e7b37985 -INFO:root:PassingDataObject: nmdc:e8dc22ebff01c071255e44fa605a4455 +INFO:root:PassingDataObject: nmdc:9c607b9ed1ae683a824d88947fb3e610 INFO:root:PassingDataObject: nmdc:0ec3e366665f88ce3193909b438a1718 +INFO:root:PassingDataObject: nmdc:b1554b516784dbec8e67e9d3215ae136 +INFO:root:PassingDataObject: nmdc:dfb4abeda1906d99fd4b51a1957c031c +INFO:root:PassingDataObject: nmdc:80a14ea7ce007b6ca9a2c9df02015bd7 +INFO:root:PassingDataObject: nmdc:a87dca20350c928a9abad3ce9f069a60 +INFO:root:PassingDataObject: nmdc:d6700cc63d980884450f32d900502b4a +INFO:root:PassingDataObject: nmdc:024bb6cf27ee5e46e1f301c54a79a6f9 INFO:root:PassingDataObject: nmdc:a913c7d050f296963e71f8392f7a5e35 +INFO:root:PassingDataObject: nmdc:1e6e050f63216068ff7cf20faf6fdafb +INFO:root:PassingDataObject: nmdc:d680fa9c8d786634c8d6717be629ab2c +INFO:root:PassingDataObject: nmdc:dcac9187a9ef976e7260043681d3630f INFO:root:PassingDataObject: nmdc:f65bf5b722d3b8af1607e62568f36054 +INFO:root:PassingDataObject: nmdc:e622746f292b7a9b926d531836a7974c +INFO:root:PassingDataObject: nmdc:e8dc22ebff01c071255e44fa605a4455 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, MAGs Analysis Activity for nmdc:mga0s123 -INFO:root:PassingDataObject: nmdc:994b3028ae77abd9d1e0d6e5b674ba59 INFO:root:PassingDataObject: nmdc:5eb848bf4358d4ef211ea672a89722d2 +INFO:root:PassingDataObject: nmdc:994b3028ae77abd9d1e0d6e5b674ba59 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138732 @@ -488,63 +488,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c139345a1c2ba3d INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, Read QC Activity for nmdc:mga06a74 -INFO:root:PassingDataObject: nmdc:5e397c1b454dc84f97f1bc57052c7193 INFO:root:PassingDataObject: nmdc:b7009ce6e0aa4cc192ce7aea732fbccd +INFO:root:PassingDataObject: nmdc:5e397c1b454dc84f97f1bc57052c7193 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, ReadBased Analysis Activity for nmdc:mga06a74 -INFO:root:PassingDataObject: nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 -INFO:root:PassingDataObject: nmdc:5f73c4622400bb304daaeec954cdd25b INFO:root:PassingDataObject: nmdc:b205ef3e409a285e33a2375934cecbec -INFO:root:PassingDataObject: nmdc:1a7a236d19019e0d4e21c6f61a7f109b +INFO:root:PassingDataObject: nmdc:96ceded2ef09bf9decce3a8486d5599d +INFO:root:PassingDataObject: nmdc:47183e38332a6949e0b723540d3f522b INFO:root:PassingDataObject: nmdc:26d4341d79dc1684a18dfef485301de9 +INFO:root:PassingDataObject: nmdc:1a7a236d19019e0d4e21c6f61a7f109b INFO:root:PassingDataObject: nmdc:6b81eca09f6ce1b5b749446b273a92d7 +INFO:root:PassingDataObject: nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 +INFO:root:PassingDataObject: nmdc:5f73c4622400bb304daaeec954cdd25b INFO:root:PassingDataObject: nmdc:c6324bb32dd9589af0344fd2266d9360 -INFO:root:PassingDataObject: nmdc:47183e38332a6949e0b723540d3f522b -INFO:root:PassingDataObject: nmdc:96ceded2ef09bf9decce3a8486d5599d INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, Assembly Activity for nmdc:mga06a74 +INFO:root:PassingDataObject: nmdc:472cd76f936bba9446e337c328f435e1 INFO:root:PassingDataObject: nmdc:8ba158e8cc9a5dfc54732fb0e085fe73 +INFO:root:PassingDataObject: nmdc:34672ea879a19c766f764451f0b968aa INFO:root:PassingDataObject: nmdc:fbed2d55f56430a821587ae24af5d6bb INFO:root:PassingDataObject: nmdc:8d664b59e79df6b3e7d8f20019231dc1 -INFO:root:PassingDataObject: nmdc:34672ea879a19c766f764451f0b968aa -INFO:root:PassingDataObject: nmdc:472cd76f936bba9446e337c328f435e1 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, Annotation Activity for nmdc:mga06a74 -INFO:root:PassingDataObject: nmdc:bc002133e20eaabff3bca4fb829b1984 -INFO:root:PassingDataObject: nmdc:1ebf3f210400cc6b65067dc5585a3d9d -INFO:root:PassingDataObject: nmdc:4b79a03003f581d5819d8df17f9182b8 -INFO:root:PassingDataObject: nmdc:47c851a1cfde3fd1089e7e6e5bcfb017 -INFO:root:PassingDataObject: nmdc:3549d803cbdb86255e40a0a591411cf1 -INFO:root:PassingDataObject: nmdc:b08adacb304d069e54753e15a8cc127b -INFO:root:PassingDataObject: nmdc:137e42ab56d961aa301cc39c1d2f6000 -INFO:root:PassingDataObject: nmdc:7d37a58b6c49790fb3d32b2abe3c19ff INFO:root:PassingDataObject: nmdc:0e7cf0420c093c50dcfcef66db82de9c +INFO:root:PassingDataObject: nmdc:b08adacb304d069e54753e15a8cc127b INFO:root:PassingDataObject: nmdc:8e4fa8b4f70d6775eaafd000952b3e78 +INFO:root:PassingDataObject: nmdc:e0be62398f583e24949f5dbd5283eedd +INFO:root:PassingDataObject: nmdc:65e138612dd63df7d5102401e083af09 +INFO:root:PassingDataObject: nmdc:1ebf3f210400cc6b65067dc5585a3d9d INFO:root:PassingDataObject: nmdc:32ea2984ed2c9a4129eeefe50d85c66d INFO:root:PassingDataObject: nmdc:7d1d8e5db3f262ddb87496abdc2ccb7e -INFO:root:PassingDataObject: nmdc:fade53d6406f5c1c57044a559d2ac64b -INFO:root:PassingDataObject: nmdc:65e138612dd63df7d5102401e083af09 +INFO:root:PassingDataObject: nmdc:9e5963eed756c6b5e8d7e5a10df354a9 +INFO:root:PassingDataObject: nmdc:47c851a1cfde3fd1089e7e6e5bcfb017 INFO:root:PassingDataObject: nmdc:fb7e8a3251841b701d3f0571b22edd17 -INFO:root:PassingDataObject: nmdc:e0be62398f583e24949f5dbd5283eedd -INFO:root:PassingDataObject: nmdc:ad6e7d85404ca8989c951c5c1bc08d6c +INFO:root:PassingDataObject: nmdc:7d37a58b6c49790fb3d32b2abe3c19ff +INFO:root:PassingDataObject: nmdc:fade53d6406f5c1c57044a559d2ac64b +INFO:root:PassingDataObject: nmdc:137e42ab56d961aa301cc39c1d2f6000 +INFO:root:PassingDataObject: nmdc:3549d803cbdb86255e40a0a591411cf1 +INFO:root:PassingDataObject: nmdc:bc002133e20eaabff3bca4fb829b1984 INFO:root:PassingDataObject: nmdc:ce8ef00c6ebca662d7fb2776b1c617fb -INFO:root:PassingDataObject: nmdc:9e5963eed756c6b5e8d7e5a10df354a9 +INFO:root:PassingDataObject: nmdc:4b79a03003f581d5819d8df17f9182b8 +INFO:root:PassingDataObject: nmdc:ad6e7d85404ca8989c951c5c1bc08d6c INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, MAGs Analysis Activity for nmdc:mga06a74 -INFO:root:PassingDataObject: nmdc:464a9f122c7defc701e3433d03fb299a INFO:root:PassingDataObject: nmdc:7b11afeb8c38eee9255532d26f523666 +INFO:root:PassingDataObject: nmdc:464a9f122c7defc701e3433d03fb299a INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138735 @@ -556,63 +556,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:dd43946edb26961 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, Read QC Activity for nmdc:mga0gt36 -INFO:root:PassingDataObject: nmdc:c35cfb19aa8ab125a2c23506526816ec INFO:root:PassingDataObject: nmdc:ea8442421f1738797fb1085314cf67e9 +INFO:root:PassingDataObject: nmdc:c35cfb19aa8ab125a2c23506526816ec INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, ReadBased Analysis Activity for nmdc:mga0gt36 -INFO:root:PassingDataObject: nmdc:f311a7ff90a56811d195c02739c75b56 +INFO:root:PassingDataObject: nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 +INFO:root:PassingDataObject: nmdc:ceec1fb674297db511106b4fe435a5a6 +INFO:root:PassingDataObject: nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 INFO:root:PassingDataObject: nmdc:60adf737df1ff873a4134e0b09abe756 +INFO:root:PassingDataObject: nmdc:f311a7ff90a56811d195c02739c75b56 INFO:root:PassingDataObject: nmdc:b913564fdf48c173240c6cb1d43fab57 -INFO:root:PassingDataObject: nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 -INFO:root:PassingDataObject: nmdc:2089bb738e19acf397b874c7ba1ee213 INFO:root:PassingDataObject: nmdc:c4b16136fb23593be83b69ddd5286cbe INFO:root:PassingDataObject: nmdc:469261fb4820f3f3ad54d0abadd789a6 -INFO:root:PassingDataObject: nmdc:ceec1fb674297db511106b4fe435a5a6 -INFO:root:PassingDataObject: nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 +INFO:root:PassingDataObject: nmdc:2089bb738e19acf397b874c7ba1ee213 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, Assembly Activity for nmdc:mga0gt36 -INFO:root:PassingDataObject: nmdc:72ccfd42865316b6cc8c8dc9695f2c19 -INFO:root:PassingDataObject: nmdc:c3b6a61384490607058dbd68e830b19b -INFO:root:PassingDataObject: nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 -INFO:root:PassingDataObject: nmdc:83e82ee96e83096f8011e524a70c08a2 INFO:root:PassingDataObject: nmdc:4c4d08b0edc259c2a106606221061f0e +INFO:root:PassingDataObject: nmdc:83e82ee96e83096f8011e524a70c08a2 +INFO:root:PassingDataObject: nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 +INFO:root:PassingDataObject: nmdc:c3b6a61384490607058dbd68e830b19b +INFO:root:PassingDataObject: nmdc:72ccfd42865316b6cc8c8dc9695f2c19 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, Annotation Activity for nmdc:mga0gt36 -INFO:root:PassingDataObject: nmdc:7efa9d93a1247532c98ee12f1127dfcc -INFO:root:PassingDataObject: nmdc:d14d22f94bd8cf5de6df684819a0c0d1 -INFO:root:PassingDataObject: nmdc:927e32d756c43b91fe6757a0109cd6cf -INFO:root:PassingDataObject: nmdc:cbe004f8b000a6d6c4f49c294b5c9903 -INFO:root:PassingDataObject: nmdc:85a7ad766cdc43fa45d4b9810ffc073b -INFO:root:PassingDataObject: nmdc:95c48f4d9521498ef6666739e4c55696 -INFO:root:PassingDataObject: nmdc:abfc23478caeeec8491474c47eda8515 -INFO:root:PassingDataObject: nmdc:b1ddf0d81c78e037baf78d2dd6392715 -INFO:root:PassingDataObject: nmdc:ba7af750da839fc2c094d62327e55fa4 -INFO:root:PassingDataObject: nmdc:425c6778a4bf095dc6034fbea33ace0c INFO:root:PassingDataObject: nmdc:53df5e5f0489b89e104ec2539c8b0051 -INFO:root:PassingDataObject: nmdc:020321e52a426669faaae3605ccf8ca7 +INFO:root:PassingDataObject: nmdc:b1ddf0d81c78e037baf78d2dd6392715 +INFO:root:PassingDataObject: nmdc:7efa9d93a1247532c98ee12f1127dfcc INFO:root:PassingDataObject: nmdc:0cd3235c18794ce8b446f2c81bcdabf8 -INFO:root:PassingDataObject: nmdc:60dfd6ccc385f2cfdc786daff351ccc9 INFO:root:PassingDataObject: nmdc:bdd204879129e8bb1ac27688c512099a INFO:root:PassingDataObject: nmdc:fa1d1c729cdf3e6d521a9375f3a0385e +INFO:root:PassingDataObject: nmdc:020321e52a426669faaae3605ccf8ca7 +INFO:root:PassingDataObject: nmdc:d14d22f94bd8cf5de6df684819a0c0d1 +INFO:root:PassingDataObject: nmdc:60dfd6ccc385f2cfdc786daff351ccc9 +INFO:root:PassingDataObject: nmdc:425c6778a4bf095dc6034fbea33ace0c +INFO:root:PassingDataObject: nmdc:85a7ad766cdc43fa45d4b9810ffc073b INFO:root:PassingDataObject: nmdc:f1fda559bba59ca313e66a72828681fe -INFO:root:PassingDataObject: nmdc:cb22bbdb816ac483d9581629ca8b726d +INFO:root:PassingDataObject: nmdc:95c48f4d9521498ef6666739e4c55696 +INFO:root:PassingDataObject: nmdc:927e32d756c43b91fe6757a0109cd6cf INFO:root:PassingDataObject: nmdc:d0c5196cec207f223cd4999c56a1c494 +INFO:root:PassingDataObject: nmdc:cb22bbdb816ac483d9581629ca8b726d +INFO:root:PassingDataObject: nmdc:abfc23478caeeec8491474c47eda8515 +INFO:root:PassingDataObject: nmdc:ba7af750da839fc2c094d62327e55fa4 +INFO:root:PassingDataObject: nmdc:cbe004f8b000a6d6c4f49c294b5c9903 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, MAGs Analysis Activity for nmdc:mga0gt36 -INFO:root:PassingDataObject: nmdc:b840f22de32b13e90b128d4f1448012b INFO:root:PassingDataObject: nmdc:b09e982b9d6f3ee0dc49048ca38b0088 +INFO:root:PassingDataObject: nmdc:b840f22de32b13e90b128d4f1448012b INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138736 @@ -631,49 +631,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138733 INFO:root:found 1 records INFO:root:record: nmdc:8b893c6adec9b20905ae26e886f077d7, ReadBased Analysis Activity for nmdc:mga0vd86 -INFO:root:PassingDataObject: nmdc:329c66c52b773c8668a4d3b0790c599c +INFO:root:PassingDataObject: nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 +INFO:root:PassingDataObject: nmdc:41a235a0bf73ce773fa4181dbb338049 +INFO:root:PassingDataObject: nmdc:4e43ac2b9303f3360570a906ad041ed7 INFO:root:PassingDataObject: nmdc:b64c8f7063313787ff247ef0262a8aec +INFO:root:PassingDataObject: nmdc:329c66c52b773c8668a4d3b0790c599c +INFO:root:PassingDataObject: nmdc:49919109da7a01549be2212d4a4b8a68 INFO:root:PassingDataObject: nmdc:88cb95d5dcac01adf30dac966bae9a55 -INFO:root:PassingDataObject: nmdc:f0d619bb56c7393d4e4f55ff535d2647 -INFO:root:PassingDataObject: nmdc:4e43ac2b9303f3360570a906ad041ed7 INFO:root:PassingDataObject: nmdc:770eea8234443b382b0c39bcd8d054de -INFO:root:PassingDataObject: nmdc:41a235a0bf73ce773fa4181dbb338049 -INFO:root:PassingDataObject: nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 -INFO:root:PassingDataObject: nmdc:49919109da7a01549be2212d4a4b8a68 +INFO:root:PassingDataObject: nmdc:f0d619bb56c7393d4e4f55ff535d2647 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138733 INFO:root:found 1 records INFO:root:record: nmdc:8b893c6adec9b20905ae26e886f077d7, Assembly Activity for nmdc:mga0vd86 -INFO:root:PassingDataObject: nmdc:2c417efe47a036338b8a49611337f9db -INFO:root:PassingDataObject: nmdc:cbd18d892fd1c6a852a7273930aa9cd1 -INFO:root:PassingDataObject: nmdc:2809e8e79869a8e41acac3f5b2ad207f INFO:root:PassingDataObject: nmdc:6c0e1781197cfa53b82aef7024b3e9ab +INFO:root:PassingDataObject: nmdc:2809e8e79869a8e41acac3f5b2ad207f +INFO:root:PassingDataObject: nmdc:cbd18d892fd1c6a852a7273930aa9cd1 +INFO:root:PassingDataObject: nmdc:2c417efe47a036338b8a49611337f9db INFO:root:PassingDataObject: nmdc:d04492608b77610683e34a7936955948 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138733 INFO:root:found 1 records INFO:root:record: nmdc:8b893c6adec9b20905ae26e886f077d7, Annotation Activity for nmdc:mga0vd86 -INFO:root:PassingDataObject: nmdc:81b4a85c10523d5717a048aa467577db -INFO:root:PassingDataObject: nmdc:bc09761c459f25952253a46e1bb334a1 +INFO:root:PassingDataObject: nmdc:1d8033cd8e6b74e859d827af874f6bf6 +INFO:root:PassingDataObject: nmdc:aa4ce55296834496f19a5e3525cedf73 INFO:root:PassingDataObject: nmdc:8602ac20e0f87bd10f0e9a2fda8154eb +INFO:root:PassingDataObject: nmdc:b82200ebb9d5cd62161d23f3f8c111df INFO:root:PassingDataObject: nmdc:a6a78267b363863a9a2fc67c5459669f +INFO:root:PassingDataObject: nmdc:1dd8791ad0f621c7cde783e6038ee023 +INFO:root:PassingDataObject: nmdc:85938ae390fa8f23734a6643877db502 +INFO:root:PassingDataObject: nmdc:0bd8a9645b72e24282f7b41cf1483e6a INFO:root:PassingDataObject: nmdc:e8afd054e3dbf529209f955a252e1030 INFO:root:PassingDataObject: nmdc:323986038fa2791de9c97d28ee5bd070 -INFO:root:PassingDataObject: nmdc:0bd8a9645b72e24282f7b41cf1483e6a -INFO:root:PassingDataObject: nmdc:6541212d9cc7b2b3415ff0053bdeb310 -INFO:root:PassingDataObject: nmdc:1d8033cd8e6b74e859d827af874f6bf6 +INFO:root:PassingDataObject: nmdc:81b4a85c10523d5717a048aa467577db INFO:root:PassingDataObject: nmdc:116ee0c2a310ae864cd6a3405e002f76 +INFO:root:PassingDataObject: nmdc:6541212d9cc7b2b3415ff0053bdeb310 +INFO:root:PassingDataObject: nmdc:f069bf3e61bc25b7317b034e9c44641a INFO:root:PassingDataObject: nmdc:71dee7fa9a220e524595a3a5244d8e67 -INFO:root:PassingDataObject: nmdc:049fef6c097c89c561ecaf8c14b289f2 -INFO:root:PassingDataObject: nmdc:1dd8791ad0f621c7cde783e6038ee023 +INFO:root:PassingDataObject: nmdc:bc09761c459f25952253a46e1bb334a1 INFO:root:PassingDataObject: nmdc:185f918733324acae3ed6dfb3491fae9 -INFO:root:PassingDataObject: nmdc:f069bf3e61bc25b7317b034e9c44641a -INFO:root:PassingDataObject: nmdc:85938ae390fa8f23734a6643877db502 +INFO:root:PassingDataObject: nmdc:049fef6c097c89c561ecaf8c14b289f2 INFO:root:PassingDataObject: nmdc:76beb2450ea9671de58e938fe90ced88 -INFO:root:PassingDataObject: nmdc:b82200ebb9d5cd62161d23f3f8c111df -INFO:root:PassingDataObject: nmdc:aa4ce55296834496f19a5e3525cedf73 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138733 @@ -692,31 +692,31 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:72779f8c6bba0a9 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, Read QC Activity for nmdc:mga0ss48 -INFO:root:PassingDataObject: nmdc:47619b9fb6a7465e25999a80826badac INFO:root:PassingDataObject: nmdc:1be9f83589f61265354476e3f6ccae9c +INFO:root:PassingDataObject: nmdc:47619b9fb6a7465e25999a80826badac INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, ReadBased Analysis Activity for nmdc:mga0ss48 -INFO:root:PassingDataObject: nmdc:226fbcb31623f7107db51f81ef175254 INFO:root:PassingDataObject: nmdc:e98f2738bfbcfb7022f19be0e5166329 +INFO:root:PassingDataObject: nmdc:a0b323f90d0b4cf4466a3225d4467616 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:761f287faac154a3b66a0c89c82738d4 -ERROR:root:FailedDataObject: nmdc:a0b323f90d0b4cf4466a3225d4467616, -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:761f287faac154a3b66a0c89c82738d4 -ERROR:root:FailedDataObject: nmdc:0b6fc695e680e2b28cffedf497701786, +ERROR:root:FailedDataObject: nmdc:226fbcb31623f7107db51f81ef175254, ERROR:root:FailedDataObject: nmdc:850ba40eb4e0d048a4dedd97f738a76d, -ERROR:root:FailedDataObject: nmdc:bd95e847cee60ace057d8d2836e42ef3, ERROR:root:FailedDataObject: nmdc:6213c5e468e7fe9212b47a00f5583dd6, +ERROR:root:FailedDataObject: nmdc:0b6fc695e680e2b28cffedf497701786, +ERROR:root:FailedDataObject: nmdc:bd95e847cee60ace057d8d2836e42ef3, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:761f287faac154a3b66a0c89c82738d4 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:761f287faac154a3b66a0c89c82738d4, ReadBased Analysis Activity for nmdc:mga0ss48 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, Assembly Activity for nmdc:mga0ss48 +INFO:root:PassingDataObject: nmdc:231f54f3e5e77afa18423c42fcc3857d INFO:root:PassingDataObject: nmdc:1c823f4d6dac3f35df41448f2de60e69 INFO:root:PassingDataObject: nmdc:90f5744d23efa69f005b0cb8377127b1 -INFO:root:PassingDataObject: nmdc:231f54f3e5e77afa18423c42fcc3857d INFO:root:PassingDataObject: nmdc:81e045c32f418f2b5a62e22902e60a6f INFO:root:PassingDataObject: nmdc:56e60e4a5424e7d07b1dba85b8013a04 INFO:root:passing_data_objects: 5 @@ -724,25 +724,25 @@ INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, Annotation Activity for nmdc:mga0ss48 -INFO:root:PassingDataObject: nmdc:a5d9ee0a72031b866fff06f0f9a90edf +INFO:root:PassingDataObject: nmdc:d2b14706623498c7c8fdbfa20f1148f0 +INFO:root:PassingDataObject: nmdc:93b052c99b076b0a9b88891308821040 +INFO:root:PassingDataObject: nmdc:c9c0ae18877d5dfb5a458bddf9d5c10e INFO:root:PassingDataObject: nmdc:3f0984b891f748f8f59f149cd47cff1d INFO:root:PassingDataObject: nmdc:25d6e3d7f8e47fed95ea618beaad6d09 -INFO:root:PassingDataObject: nmdc:20ecb5c90f54b5f3485671cd46b2e080 -INFO:root:PassingDataObject: nmdc:c9c0ae18877d5dfb5a458bddf9d5c10e -INFO:root:PassingDataObject: nmdc:47fd3d7465f923567354f7c7f97800dd -INFO:root:PassingDataObject: nmdc:d2b14706623498c7c8fdbfa20f1148f0 -INFO:root:PassingDataObject: nmdc:d236a317e488b24552fc77c62d7ffaf1 -INFO:root:PassingDataObject: nmdc:26765704d44f117a047d88408c28429c INFO:root:PassingDataObject: nmdc:36796c11964b86c7bc45151f77d037e8 +INFO:root:PassingDataObject: nmdc:f3ba8c76937d04cba63db9010ff5e47f INFO:root:PassingDataObject: nmdc:81a2de9e9a3a0bf39b805f2dea6892f6 -INFO:root:PassingDataObject: nmdc:6bb13b15cb95497cc41de5d5edb9d438 -INFO:root:PassingDataObject: nmdc:62b205ed5ad0347a0da49263cd6063aa +INFO:root:PassingDataObject: nmdc:a5d9ee0a72031b866fff06f0f9a90edf +INFO:root:PassingDataObject: nmdc:47fd3d7465f923567354f7c7f97800dd +INFO:root:PassingDataObject: nmdc:26765704d44f117a047d88408c28429c INFO:root:PassingDataObject: nmdc:e25b7b92d87b68f28099cb4c21810a47 -INFO:root:PassingDataObject: nmdc:f3ba8c76937d04cba63db9010ff5e47f INFO:root:PassingDataObject: nmdc:db3783da4bfbafc0455be4dbefda6441 -INFO:root:PassingDataObject: nmdc:911a0446f7504751a8b84c573ccb3833 INFO:root:PassingDataObject: nmdc:726bf715a351123ab93c3edb04e02eab -INFO:root:PassingDataObject: nmdc:93b052c99b076b0a9b88891308821040 +INFO:root:PassingDataObject: nmdc:62b205ed5ad0347a0da49263cd6063aa +INFO:root:PassingDataObject: nmdc:20ecb5c90f54b5f3485671cd46b2e080 +INFO:root:PassingDataObject: nmdc:911a0446f7504751a8b84c573ccb3833 +INFO:root:PassingDataObject: nmdc:d236a317e488b24552fc77c62d7ffaf1 +INFO:root:PassingDataObject: nmdc:6bb13b15cb95497cc41de5d5edb9d438 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138737 @@ -768,14 +768,14 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138740 INFO:root:found 1 records INFO:root:record: nmdc:8253bcdcd0387177ff895c38a047c719, ReadBased Analysis Activity for nmdc:mga0wa96 -INFO:root:PassingDataObject: nmdc:f5351ea13159feff2d0198a0da29c8a5 -INFO:root:PassingDataObject: nmdc:0772b0a1db633615098d8805d70bc46f -INFO:root:PassingDataObject: nmdc:a051f2d528db2c3d027e40f580724536 -INFO:root:PassingDataObject: nmdc:4beca79435164e92624ade0095a6f28f -INFO:root:PassingDataObject: nmdc:339c0d5d2e73387fb9ef43b6a9b20da4 -INFO:root:PassingDataObject: nmdc:e320964bdde1bf5d0ed42c874431a09f ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:8253bcdcd0387177ff895c38a047c719 +ERROR:root:FailedDataObject: nmdc:f5351ea13159feff2d0198a0da29c8a5, +ERROR:root:FailedDataObject: nmdc:a051f2d528db2c3d027e40f580724536, +ERROR:root:FailedDataObject: nmdc:0772b0a1db633615098d8805d70bc46f, +ERROR:root:FailedDataObject: nmdc:339c0d5d2e73387fb9ef43b6a9b20da4, +ERROR:root:FailedDataObject: nmdc:4beca79435164e92624ade0095a6f28f, ERROR:root:FailedDataObject: nmdc:99b68ca9274dd5c8c15a727d8a4be5c1, +ERROR:root:FailedDataObject: nmdc:e320964bdde1bf5d0ed42c874431a09f, ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:8253bcdcd0387177ff895c38a047c719 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:8253bcdcd0387177ff895c38a047c719, ReadBased Analysis Activity for nmdc:mga0wa96 @@ -783,35 +783,35 @@ ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138740 INFO:root:found 1 records INFO:root:record: nmdc:8253bcdcd0387177ff895c38a047c719, Assembly Activity for nmdc:mga0wa96 -INFO:root:PassingDataObject: nmdc:e50cf5553a7a06a03424a5123ba0dabc INFO:root:PassingDataObject: nmdc:4f20a2e7cc9051159641ca5147fc7382 -INFO:root:PassingDataObject: nmdc:c72608f8b3bd84bf80868d30e02aab72 INFO:root:PassingDataObject: nmdc:9c7f00ab9890b52eadf20c168496f65e +INFO:root:PassingDataObject: nmdc:e50cf5553a7a06a03424a5123ba0dabc INFO:root:PassingDataObject: nmdc:9fd9e4c2052840e335bf4dd7dc1a836c +INFO:root:PassingDataObject: nmdc:c72608f8b3bd84bf80868d30e02aab72 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138740 INFO:root:found 1 records INFO:root:record: nmdc:8253bcdcd0387177ff895c38a047c719, Annotation Activity for nmdc:mga0wa96 -INFO:root:PassingDataObject: nmdc:8e3f4a31cffaa5ed16720dd2cc307cfe -INFO:root:PassingDataObject: nmdc:41798fb9f46e5a1f0b197e1a6e51f512 -INFO:root:PassingDataObject: nmdc:5171d0c088015720cd216846f4066a72 -INFO:root:PassingDataObject: nmdc:74bc387b3c1997a2ef32a73dafbb0d99 -INFO:root:PassingDataObject: nmdc:93ae523450f54e6522dc754534a9362c -INFO:root:PassingDataObject: nmdc:bf05b81e80a02b38d0d211d58f2d413b -INFO:root:PassingDataObject: nmdc:3677b510d260307cc90b6fda8c5cd269 -INFO:root:PassingDataObject: nmdc:ed02438e8bebd44e59b492511a08678e INFO:root:PassingDataObject: nmdc:38657fd9c98fd102f766053eb8d93a2c +INFO:root:PassingDataObject: nmdc:54493de90db3c8b1b0072d9beb89b6d1 +INFO:root:PassingDataObject: nmdc:ed02438e8bebd44e59b492511a08678e INFO:root:PassingDataObject: nmdc:05946b88835fbe867d6f2f535d28429b -INFO:root:PassingDataObject: nmdc:bf8e8b6f87834f5d948853c611f20e8a -INFO:root:PassingDataObject: nmdc:17f84865341a0bd90d493f3fda754e05 INFO:root:PassingDataObject: nmdc:3ccffa0f1685fbe09757f60d14a64d1d +INFO:root:PassingDataObject: nmdc:17f84865341a0bd90d493f3fda754e05 +INFO:root:PassingDataObject: nmdc:4b1f0a35b5a360144bb20c1df719b4b5 +INFO:root:PassingDataObject: nmdc:93ae523450f54e6522dc754534a9362c INFO:root:PassingDataObject: nmdc:50bd0bb4c2f99f4e0904a486096615db -INFO:root:PassingDataObject: nmdc:54493de90db3c8b1b0072d9beb89b6d1 -INFO:root:PassingDataObject: nmdc:5d1a8ba5117b170cca6c27fca703c3a5 +INFO:root:PassingDataObject: nmdc:41798fb9f46e5a1f0b197e1a6e51f512 +INFO:root:PassingDataObject: nmdc:8e3f4a31cffaa5ed16720dd2cc307cfe INFO:root:PassingDataObject: nmdc:3c201ceb9c4aedbcd7cde221464dce84 -INFO:root:PassingDataObject: nmdc:4b1f0a35b5a360144bb20c1df719b4b5 +INFO:root:PassingDataObject: nmdc:5171d0c088015720cd216846f4066a72 +INFO:root:PassingDataObject: nmdc:3677b510d260307cc90b6fda8c5cd269 +INFO:root:PassingDataObject: nmdc:74bc387b3c1997a2ef32a73dafbb0d99 INFO:root:PassingDataObject: nmdc:003fe178e2ef974bf3a0d30f5bebbba2 +INFO:root:PassingDataObject: nmdc:bf05b81e80a02b38d0d211d58f2d413b +INFO:root:PassingDataObject: nmdc:bf8e8b6f87834f5d948853c611f20e8a +INFO:root:PassingDataObject: nmdc:5d1a8ba5117b170cca6c27fca703c3a5 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138740 @@ -837,50 +837,50 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138741 INFO:root:found 1 records INFO:root:record: nmdc:7a197d54a06a37090bb50eaf37c93115, ReadBased Analysis Activity for nmdc:mga0tq55 -INFO:root:PassingDataObject: nmdc:4e6cf38af0b5b8f16d8fc1f7779c5a29 INFO:root:PassingDataObject: nmdc:1ffe29c4f789e512f13b81b684fcf61e -INFO:root:PassingDataObject: nmdc:e333f1a4984287f28b1ec6bc2f5e220f +INFO:root:PassingDataObject: nmdc:bf95f667ae01fcec06e7965d922f63c3 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:7a197d54a06a37090bb50eaf37c93115 -ERROR:root:FailedDataObject: nmdc:bf95f667ae01fcec06e7965d922f63c3, -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:7a197d54a06a37090bb50eaf37c93115 ERROR:root:FailedDataObject: nmdc:3bc683ffe2c367faf6e6ae90087e0410, ERROR:root:FailedDataObject: nmdc:f7454a9a53391dd69116eaa495972281, ERROR:root:FailedDataObject: nmdc:d915cd752473ca2dee362b6f5d6463f9, +ERROR:root:FailedDataObject: nmdc:e333f1a4984287f28b1ec6bc2f5e220f, +ERROR:root:FailedDataObject: nmdc:4e6cf38af0b5b8f16d8fc1f7779c5a29, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:7a197d54a06a37090bb50eaf37c93115 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7a197d54a06a37090bb50eaf37c93115, ReadBased Analysis Activity for nmdc:mga0tq55 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138741 INFO:root:found 1 records INFO:root:record: nmdc:7a197d54a06a37090bb50eaf37c93115, Assembly Activity for nmdc:mga0tq55 +INFO:root:PassingDataObject: nmdc:eeaca1069da3f994467936972ebc4a79 INFO:root:PassingDataObject: nmdc:c770451eda4fa76c8f06e4eac0cb5800 -INFO:root:PassingDataObject: nmdc:165d07a310f116f21e4a3cb1d2f9001e INFO:root:PassingDataObject: nmdc:58c1cb4a44fddf66e9805298fa4b53e2 INFO:root:PassingDataObject: nmdc:5352457da0e9bb72bf0ae6088939908d -INFO:root:PassingDataObject: nmdc:eeaca1069da3f994467936972ebc4a79 +INFO:root:PassingDataObject: nmdc:165d07a310f116f21e4a3cb1d2f9001e INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138741 INFO:root:found 1 records INFO:root:record: nmdc:7a197d54a06a37090bb50eaf37c93115, Annotation Activity for nmdc:mga0tq55 -INFO:root:PassingDataObject: nmdc:f841ad5bad65cb6102613fb116910ddb -INFO:root:PassingDataObject: nmdc:4327174ad1618018feb88d769a056af4 +INFO:root:PassingDataObject: nmdc:257bc76d56c0c71a360332b8a00de230 INFO:root:PassingDataObject: nmdc:8d57364c66c0db773c35fdcc3d4d245d -INFO:root:PassingDataObject: nmdc:9870575bfbaa5f825e9c592f96353994 -INFO:root:PassingDataObject: nmdc:ad08f8176e5097538ebda0c1baaeeb4d -INFO:root:PassingDataObject: nmdc:7f4f16cacad465a86d5fecf743ddc086 INFO:root:PassingDataObject: nmdc:a0c607758679498cf366feb4f856de58 -INFO:root:PassingDataObject: nmdc:3b7958095417ea34a7a946545f173f82 -INFO:root:PassingDataObject: nmdc:be978b1c2c9828ea440707e1a01069d6 -INFO:root:PassingDataObject: nmdc:94f91e2ce07a9ea76bff7b315d598fe4 +INFO:root:PassingDataObject: nmdc:7f4f16cacad465a86d5fecf743ddc086 INFO:root:PassingDataObject: nmdc:7b3f59bcfee1a9c3156f36051cf616fd -INFO:root:PassingDataObject: nmdc:257bc76d56c0c71a360332b8a00de230 -INFO:root:PassingDataObject: nmdc:2436d215e74129b5f8d9f2175debba91 -INFO:root:PassingDataObject: nmdc:bf09fb899dfd022f91d6257e25af18ef INFO:root:PassingDataObject: nmdc:17f3687453f35040de7e8686d3c902d2 -INFO:root:PassingDataObject: nmdc:5da31fee870b6f0594b3a5bb937a48cc -INFO:root:PassingDataObject: nmdc:2a365551bc9e238a0229d806792d0b0d +INFO:root:PassingDataObject: nmdc:3b7958095417ea34a7a946545f173f82 +INFO:root:PassingDataObject: nmdc:4327174ad1618018feb88d769a056af4 +INFO:root:PassingDataObject: nmdc:9870575bfbaa5f825e9c592f96353994 +INFO:root:PassingDataObject: nmdc:f841ad5bad65cb6102613fb116910ddb INFO:root:PassingDataObject: nmdc:3638f7b2afecb282ab8cb3ec296e6c4c +INFO:root:PassingDataObject: nmdc:94f91e2ce07a9ea76bff7b315d598fe4 INFO:root:PassingDataObject: nmdc:48fbc9a98c0027f1316d34f86543ce6c +INFO:root:PassingDataObject: nmdc:5da31fee870b6f0594b3a5bb937a48cc +INFO:root:PassingDataObject: nmdc:be978b1c2c9828ea440707e1a01069d6 +INFO:root:PassingDataObject: nmdc:2436d215e74129b5f8d9f2175debba91 +INFO:root:PassingDataObject: nmdc:2a365551bc9e238a0229d806792d0b0d +INFO:root:PassingDataObject: nmdc:bf09fb899dfd022f91d6257e25af18ef +INFO:root:PassingDataObject: nmdc:ad08f8176e5097538ebda0c1baaeeb4d INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138741 @@ -906,24 +906,24 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, ReadBased Analysis Activity for nmdc:mga00971 -INFO:root:PassingDataObject: nmdc:9139fb2f1cafb0e7a29de83443d89df6 -INFO:root:PassingDataObject: nmdc:bd13ac21b6f0a108144db9d5e73dce51 -INFO:root:PassingDataObject: nmdc:fd42771008a5df5cacdc5cbe3cb296d6 -INFO:root:PassingDataObject: nmdc:7ae79531a0268d93cb8251e3397609a3 +INFO:root:PassingDataObject: nmdc:6eddef8b7922a4ee66e1c929e662fb44 INFO:root:PassingDataObject: nmdc:4fe35f89a855453d3f6c7a3429e35d02 INFO:root:PassingDataObject: nmdc:7c470106d10e95c1834c089f94607bed +INFO:root:PassingDataObject: nmdc:fd42771008a5df5cacdc5cbe3cb296d6 INFO:root:PassingDataObject: nmdc:8501f826e986b8c96cfa0f1fc3b95664 -INFO:root:PassingDataObject: nmdc:6eddef8b7922a4ee66e1c929e662fb44 +INFO:root:PassingDataObject: nmdc:7ae79531a0268d93cb8251e3397609a3 INFO:root:PassingDataObject: nmdc:777ba469c171b72a370b3574aa51698b +INFO:root:PassingDataObject: nmdc:9139fb2f1cafb0e7a29de83443d89df6 +INFO:root:PassingDataObject: nmdc:bd13ac21b6f0a108144db9d5e73dce51 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, Assembly Activity for nmdc:mga00971 +INFO:root:PassingDataObject: nmdc:ce78f79a3d3b02bb500ff0d58e124cda +INFO:root:PassingDataObject: nmdc:18a7268d072a2d6a817f40573167bbac INFO:root:PassingDataObject: nmdc:2154ce589183eb8a7b4d32a2647772e8 INFO:root:PassingDataObject: nmdc:f0cbbb5775ed6286652ceae5351c2cf9 -INFO:root:PassingDataObject: nmdc:18a7268d072a2d6a817f40573167bbac -INFO:root:PassingDataObject: nmdc:ce78f79a3d3b02bb500ff0d58e124cda INFO:root:PassingDataObject: nmdc:474a282db436e36825592becc05c375b INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 @@ -931,31 +931,31 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, Annotation Activity for nmdc:mga00971 INFO:root:PassingDataObject: nmdc:ef5249f7c6136638049150ea54eb89b1 +INFO:root:PassingDataObject: nmdc:19b849f080718bdb0d8dbeb2ce01fa67 +INFO:root:PassingDataObject: nmdc:965cf5a13764ee91b7305127884f5950 +INFO:root:PassingDataObject: nmdc:0f8b1cbc658040f24f66294f4d4306a9 +INFO:root:PassingDataObject: nmdc:360c2606213879f89bcb2dcbc406d4b9 +INFO:root:PassingDataObject: nmdc:6044ce8f94fb006e642987384ea60126 INFO:root:PassingDataObject: nmdc:dbabffe4aac7483f168d92b5cf7a28a1 INFO:root:PassingDataObject: nmdc:a04e9fd6a0fe3952944a24f7892264dc -INFO:root:PassingDataObject: nmdc:19b849f080718bdb0d8dbeb2ce01fa67 -INFO:root:PassingDataObject: nmdc:c4a823de834cf97a6f52971d49497988 -INFO:root:PassingDataObject: nmdc:2a8ce79f6f4217c0e4a213f8023810d8 -INFO:root:PassingDataObject: nmdc:8e28d4ae4513dfe9c2269e15093d6165 +INFO:root:PassingDataObject: nmdc:f138de342b75111237cc7b0fff78e88b INFO:root:PassingDataObject: nmdc:47b332fd6f21603209d4f493b1e42a6f INFO:root:PassingDataObject: nmdc:bb0b98a7aed89a4c05d65f6897ad95a6 INFO:root:PassingDataObject: nmdc:3995dba8cef26ae414538e88e49c3f01 -INFO:root:PassingDataObject: nmdc:360c2606213879f89bcb2dcbc406d4b9 +INFO:root:PassingDataObject: nmdc:c4a823de834cf97a6f52971d49497988 +INFO:root:PassingDataObject: nmdc:fe275c8706f1992fc3c95ae4561a30d9 INFO:root:PassingDataObject: nmdc:2f0cdbf5db2bef3ef6949b2b46a86a55 INFO:root:PassingDataObject: nmdc:8f47c8251f6770702754c466ce9d2868 -INFO:root:PassingDataObject: nmdc:6044ce8f94fb006e642987384ea60126 -INFO:root:PassingDataObject: nmdc:f138de342b75111237cc7b0fff78e88b -INFO:root:PassingDataObject: nmdc:0f8b1cbc658040f24f66294f4d4306a9 -INFO:root:PassingDataObject: nmdc:fe275c8706f1992fc3c95ae4561a30d9 -INFO:root:PassingDataObject: nmdc:965cf5a13764ee91b7305127884f5950 +INFO:root:PassingDataObject: nmdc:2a8ce79f6f4217c0e4a213f8023810d8 +INFO:root:PassingDataObject: nmdc:8e28d4ae4513dfe9c2269e15093d6165 INFO:root:PassingDataObject: nmdc:4f001c776b4cc3c1018fbc4349aed5d5 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, MAGs Analysis Activity for nmdc:mga00971 -INFO:root:PassingDataObject: nmdc:e2e1a52c33565fb44e640f53da1d5ea8 INFO:root:PassingDataObject: nmdc:4db2606221f9dc08aac305a08470aec0 +INFO:root:PassingDataObject: nmdc:e2e1a52c33565fb44e640f53da1d5ea8 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138742 @@ -974,15 +974,15 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138738 INFO:root:found 1 records INFO:root:record: nmdc:5ab2faba70b7dc9853cecf68af4576c8, ReadBased Analysis Activity for nmdc:mga09t29 -INFO:root:PassingDataObject: nmdc:268db5579721a196c95872bf480e4329 -INFO:root:PassingDataObject: nmdc:b15dfe140998e9c1364ef5299b4b86d2 -INFO:root:PassingDataObject: nmdc:50958da5af250342f2089bec02364e12 -INFO:root:PassingDataObject: nmdc:97d9170806e02d05bfdf2b1fecdda547 INFO:root:PassingDataObject: nmdc:001e0726d6f7e54706f445f568de1fd9 INFO:root:PassingDataObject: nmdc:fa5dfe9d5ceb255bd4568badb0cc811b +INFO:root:PassingDataObject: nmdc:b15dfe140998e9c1364ef5299b4b86d2 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:5ab2faba70b7dc9853cecf68af4576c8 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:5ab2faba70b7dc9853cecf68af4576c8 +ERROR:root:FailedDataObject: nmdc:97d9170806e02d05bfdf2b1fecdda547, ERROR:root:FailedDataObject: nmdc:ece64e0755d738464f01e5af77732ee1, +ERROR:root:FailedDataObject: nmdc:268db5579721a196c95872bf480e4329, +ERROR:root:FailedDataObject: nmdc:50958da5af250342f2089bec02364e12, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:5ab2faba70b7dc9853cecf68af4576c8 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5ab2faba70b7dc9853cecf68af4576c8, ReadBased Analysis Activity for nmdc:mga09t29 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 @@ -991,33 +991,33 @@ INFO:root:found 1 records INFO:root:record: nmdc:5ab2faba70b7dc9853cecf68af4576c8, Assembly Activity for nmdc:mga09t29 INFO:root:PassingDataObject: nmdc:422bde67781e860175c83611a11d317a INFO:root:PassingDataObject: nmdc:0d11b4879140511f9145b1ff462a7c81 -INFO:root:PassingDataObject: nmdc:011a494743bdca4d60822bd753d267da INFO:root:PassingDataObject: nmdc:824e98c7b6dd7cfb5b35d2c37b7fb0be INFO:root:PassingDataObject: nmdc:fd08b76d94a1499d6dccd314d7564fcb +INFO:root:PassingDataObject: nmdc:011a494743bdca4d60822bd753d267da INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138738 INFO:root:found 1 records INFO:root:record: nmdc:5ab2faba70b7dc9853cecf68af4576c8, Annotation Activity for nmdc:mga09t29 -INFO:root:PassingDataObject: nmdc:41d71192142e3f641ec5c459d2cdb714 -INFO:root:PassingDataObject: nmdc:8d6fb6e201cfa7d83dc0b2bb1f1ff4ec -INFO:root:PassingDataObject: nmdc:6c3c2b94e738efd60119221bcbca287c -INFO:root:PassingDataObject: nmdc:38c60e2ca253c1e38ffadee7770d74e3 INFO:root:PassingDataObject: nmdc:0aab649c867dda31c6a4dcf4274c08dd +INFO:root:PassingDataObject: nmdc:79c82b42d89f2569dc0b5771aa31709e +INFO:root:PassingDataObject: nmdc:b2d9fb2b2448410b870a80dd86302929 +INFO:root:PassingDataObject: nmdc:e60fb6f57d31ede551549edc58a7f437 +INFO:root:PassingDataObject: nmdc:e4dca1c95d44427756ec100302ff1b45 +INFO:root:PassingDataObject: nmdc:41d71192142e3f641ec5c459d2cdb714 INFO:root:PassingDataObject: nmdc:36e269ec0e3018dbd46e6a48570fa212 -INFO:root:PassingDataObject: nmdc:a82ff6fae87cbc433a7ad3b831c140af -INFO:root:PassingDataObject: nmdc:2db6022813f97372dbffe557e4ff51cc +INFO:root:PassingDataObject: nmdc:056e6b23009f276739d9b41b5915a1b3 +INFO:root:PassingDataObject: nmdc:38c60e2ca253c1e38ffadee7770d74e3 INFO:root:PassingDataObject: nmdc:46722f9f86277ec2635b5076bdc1a11c -INFO:root:PassingDataObject: nmdc:b2d9fb2b2448410b870a80dd86302929 -INFO:root:PassingDataObject: nmdc:bc09cfdf5dca7971a8b8a67c7ab46a5b -INFO:root:PassingDataObject: nmdc:79c82b42d89f2569dc0b5771aa31709e +INFO:root:PassingDataObject: nmdc:8d6fb6e201cfa7d83dc0b2bb1f1ff4ec INFO:root:PassingDataObject: nmdc:f043c766925ea9e59ce942fb7358d0de +INFO:root:PassingDataObject: nmdc:a82ff6fae87cbc433a7ad3b831c140af INFO:root:PassingDataObject: nmdc:f21e469991fcd968b8aab09eba8ecc9d -INFO:root:PassingDataObject: nmdc:e60fb6f57d31ede551549edc58a7f437 INFO:root:PassingDataObject: nmdc:f59eab589a1d4e5da3826075b38e7a58 -INFO:root:PassingDataObject: nmdc:056e6b23009f276739d9b41b5915a1b3 INFO:root:PassingDataObject: nmdc:813a8a2ae284b575a59a1fc9bf51afc7 -INFO:root:PassingDataObject: nmdc:e4dca1c95d44427756ec100302ff1b45 +INFO:root:PassingDataObject: nmdc:bc09cfdf5dca7971a8b8a67c7ab46a5b +INFO:root:PassingDataObject: nmdc:6c3c2b94e738efd60119221bcbca287c +INFO:root:PassingDataObject: nmdc:2db6022813f97372dbffe557e4ff51cc INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138738 @@ -1043,57 +1043,57 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, ReadBased Analysis Activity for nmdc:mga0aj54 -INFO:root:PassingDataObject: nmdc:5ae72a513af1a9b6c1019bf8f17fdde1 -INFO:root:PassingDataObject: nmdc:08c2b9a09f897ecbe302b8e3f416dd6e -INFO:root:PassingDataObject: nmdc:f3f5c721edf09670ee391fe8dd3d8af5 INFO:root:PassingDataObject: nmdc:c6ab280a9a71332ea8437846fc5fa70e INFO:root:PassingDataObject: nmdc:416b6fb7651eb157d2bb3865425bb6de INFO:root:PassingDataObject: nmdc:524bc22a021d7a40aeb134a64416cc8b +INFO:root:PassingDataObject: nmdc:5ae72a513af1a9b6c1019bf8f17fdde1 +INFO:root:PassingDataObject: nmdc:273b8d4164abe7092da949a37a8c328d ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:3bbc2e110acd6e6b200fd43814337b94 +ERROR:root:FailedDataObject: nmdc:f3f5c721edf09670ee391fe8dd3d8af5, +ERROR:root:FailedDataObject: nmdc:08c2b9a09f897ecbe302b8e3f416dd6e, ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:3bbc2e110acd6e6b200fd43814337b94 -ERROR:root:FailedDataObject: nmdc:273b8d4164abe7092da949a37a8c328d, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:3bbc2e110acd6e6b200fd43814337b94, ReadBased Analysis Activity for nmdc:mga0aj54 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, Assembly Activity for nmdc:mga0aj54 -INFO:root:PassingDataObject: nmdc:8c7b5026a6eec96bfca8952bc4b5428d INFO:root:PassingDataObject: nmdc:958b6797d29ca57deaf65e887b454cb5 -INFO:root:PassingDataObject: nmdc:ddc6c7a31223f8a9ca4789411e350531 +INFO:root:PassingDataObject: nmdc:8c7b5026a6eec96bfca8952bc4b5428d INFO:root:PassingDataObject: nmdc:4ec1e0396d5c08d1e050c1652d784f90 INFO:root:PassingDataObject: nmdc:f2f329016e730437180ba6eab7235a84 +INFO:root:PassingDataObject: nmdc:ddc6c7a31223f8a9ca4789411e350531 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, Annotation Activity for nmdc:mga0aj54 -INFO:root:PassingDataObject: nmdc:e87ae2ba455d63b220b2e617cb222f7d -INFO:root:PassingDataObject: nmdc:702e1e0636bf19e2d193c126ff998822 +INFO:root:PassingDataObject: nmdc:e0774f0c0f4baf71a84eae6be502f90e +INFO:root:PassingDataObject: nmdc:ea89cd2e25979f716ccbd38e3917ca5f +INFO:root:PassingDataObject: nmdc:46244c24af7307fcdad91e094a354981 INFO:root:PassingDataObject: nmdc:976ee59d80b5025e98159d2b3fd458d9 +INFO:root:PassingDataObject: nmdc:53596a7cb5b2b33600c45912c615ebf5 +INFO:root:PassingDataObject: nmdc:4db1bd3e5e7c5e52b5cba46f9b61d134 +INFO:root:PassingDataObject: nmdc:4411a486b86f7ce17c0034c1b2b80781 INFO:root:PassingDataObject: nmdc:cf6fa68e05fb9f50d8af6a0447dabb58 +INFO:root:PassingDataObject: nmdc:d1b31076f21e432c6e3f4014579c4461 +INFO:root:PassingDataObject: nmdc:702e1e0636bf19e2d193c126ff998822 +INFO:root:PassingDataObject: nmdc:136bee1d56bc75df5ac449a6c55f0d0d +INFO:root:PassingDataObject: nmdc:447c56fdf72411afb98473b12c4675cf +INFO:root:PassingDataObject: nmdc:e87ae2ba455d63b220b2e617cb222f7d +INFO:root:PassingDataObject: nmdc:07b6a64c3def2377006b7460a8029451 +INFO:root:PassingDataObject: nmdc:ba838a40c8f7cb83c7b6b58b892585ae INFO:root:PassingDataObject: nmdc:2ec02a7d96d67725f13f84c93eac17a8 INFO:root:PassingDataObject: nmdc:952582415dc1b398c37f74a4cabc7860 INFO:root:PassingDataObject: nmdc:fa12b30f6453f99100c6ecab4269e951 -INFO:root:PassingDataObject: nmdc:46244c24af7307fcdad91e094a354981 -INFO:root:PassingDataObject: nmdc:e0774f0c0f4baf71a84eae6be502f90e -INFO:root:PassingDataObject: nmdc:53596a7cb5b2b33600c45912c615ebf5 -INFO:root:PassingDataObject: nmdc:ea89cd2e25979f716ccbd38e3917ca5f -INFO:root:PassingDataObject: nmdc:07b6a64c3def2377006b7460a8029451 -INFO:root:PassingDataObject: nmdc:ba838a40c8f7cb83c7b6b58b892585ae INFO:root:PassingDataObject: nmdc:4de43bc8062da919e02349aea67fde69 -INFO:root:PassingDataObject: nmdc:4db1bd3e5e7c5e52b5cba46f9b61d134 -INFO:root:PassingDataObject: nmdc:447c56fdf72411afb98473b12c4675cf -INFO:root:PassingDataObject: nmdc:136bee1d56bc75df5ac449a6c55f0d0d -INFO:root:PassingDataObject: nmdc:4411a486b86f7ce17c0034c1b2b80781 -INFO:root:PassingDataObject: nmdc:d1b31076f21e432c6e3f4014579c4461 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, MAGs Analysis Activity for nmdc:mga0aj54 -INFO:root:PassingDataObject: nmdc:f496b531528f5508a8a82cd1d2878ab8 INFO:root:PassingDataObject: nmdc:050b87bd984904881d86de89aee4feda +INFO:root:PassingDataObject: nmdc:f496b531528f5508a8a82cd1d2878ab8 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138744 @@ -1112,50 +1112,50 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138746 INFO:root:found 1 records INFO:root:record: nmdc:3c401e2ee440df4d96027e3594618104, ReadBased Analysis Activity for nmdc:mga0zt51 +INFO:root:PassingDataObject: nmdc:d1bdd8d4605e561039cb3850827b98bd INFO:root:PassingDataObject: nmdc:134b632cd3e5bec9cea4c456165d6097 -INFO:root:PassingDataObject: nmdc:4ebba69aaf20856dffe47ac5ac672cad -INFO:root:PassingDataObject: nmdc:c108b67654466dd0a54b8bb3fdafa57e -INFO:root:PassingDataObject: nmdc:15ac88a0ee25984da7e44867aa9c07d2 INFO:root:PassingDataObject: nmdc:4739561177541ad557f80275397e7675 -INFO:root:PassingDataObject: nmdc:d1bdd8d4605e561039cb3850827b98bd ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:3c401e2ee440df4d96027e3594618104 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:3c401e2ee440df4d96027e3594618104 +ERROR:root:FailedDataObject: nmdc:c108b67654466dd0a54b8bb3fdafa57e, ERROR:root:FailedDataObject: nmdc:cd65e6db9367f66976bd2eebd4b83acb, +ERROR:root:FailedDataObject: nmdc:15ac88a0ee25984da7e44867aa9c07d2, +ERROR:root:FailedDataObject: nmdc:4ebba69aaf20856dffe47ac5ac672cad, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:3c401e2ee440df4d96027e3594618104 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:3c401e2ee440df4d96027e3594618104, ReadBased Analysis Activity for nmdc:mga0zt51 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138746 INFO:root:found 1 records INFO:root:record: nmdc:3c401e2ee440df4d96027e3594618104, Assembly Activity for nmdc:mga0zt51 +INFO:root:PassingDataObject: nmdc:5fd489af1a69328b86c2d5b1d42ffe57 +INFO:root:PassingDataObject: nmdc:7e46c30d89c3d8fbf7007e1dd144e070 INFO:root:PassingDataObject: nmdc:2b67bbda2f0dbbeee56f90d9360b615c INFO:root:PassingDataObject: nmdc:efd90d7b508360c3c0e4067cf039f15f INFO:root:PassingDataObject: nmdc:f778360d55e8fb9c7a0d8c3a1ab51632 -INFO:root:PassingDataObject: nmdc:7e46c30d89c3d8fbf7007e1dd144e070 -INFO:root:PassingDataObject: nmdc:5fd489af1a69328b86c2d5b1d42ffe57 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138746 INFO:root:found 1 records INFO:root:record: nmdc:3c401e2ee440df4d96027e3594618104, Annotation Activity for nmdc:mga0zt51 +INFO:root:PassingDataObject: nmdc:ce7c172fede745f9524e980bc9721146 INFO:root:PassingDataObject: nmdc:95f4349d416425cecb9e54fa40e8f08c -INFO:root:PassingDataObject: nmdc:3ee202c9076d6a998f81e4498749095f -INFO:root:PassingDataObject: nmdc:3a792c90abe7c711ecde24bd543c5237 -INFO:root:PassingDataObject: nmdc:abd82397b4fdc2c854e1906278f27002 +INFO:root:PassingDataObject: nmdc:7cd8fdb30c38a525a05cc0acb7d4fe75 INFO:root:PassingDataObject: nmdc:5d2b15ee16b57d59328c5f9ec04b34c3 -INFO:root:PassingDataObject: nmdc:d9af78b42526d166941ce0f2b92e4946 -INFO:root:PassingDataObject: nmdc:aa011778de4d2f547524ed4eaf1747b8 +INFO:root:PassingDataObject: nmdc:3efe965e66a322418941eadf98a4964c INFO:root:PassingDataObject: nmdc:f28c02766ae0772d9be72094dbde4b24 -INFO:root:PassingDataObject: nmdc:7176e62a03288ff870bdac243e44e311 +INFO:root:PassingDataObject: nmdc:4d6f999a56b77e9ee172c144830b0cae INFO:root:PassingDataObject: nmdc:ee3314d3d117cdcdfdbf1127e03b8079 -INFO:root:PassingDataObject: nmdc:cab1c5784feea8c0e140a024a0136b41 -INFO:root:PassingDataObject: nmdc:a88a54a401f4416061f9b723cbe5a99b -INFO:root:PassingDataObject: nmdc:3efe965e66a322418941eadf98a4964c -INFO:root:PassingDataObject: nmdc:7cd8fdb30c38a525a05cc0acb7d4fe75 INFO:root:PassingDataObject: nmdc:0162b13864608d91c76156288c78d354 -INFO:root:PassingDataObject: nmdc:83b34703fc84c05080f8f7bb80888e98 -INFO:root:PassingDataObject: nmdc:4d6f999a56b77e9ee172c144830b0cae -INFO:root:PassingDataObject: nmdc:ce7c172fede745f9524e980bc9721146 +INFO:root:PassingDataObject: nmdc:a88a54a401f4416061f9b723cbe5a99b INFO:root:PassingDataObject: nmdc:419a9ebd0876d42a2bec86e585869350 +INFO:root:PassingDataObject: nmdc:83b34703fc84c05080f8f7bb80888e98 +INFO:root:PassingDataObject: nmdc:abd82397b4fdc2c854e1906278f27002 +INFO:root:PassingDataObject: nmdc:3a792c90abe7c711ecde24bd543c5237 +INFO:root:PassingDataObject: nmdc:7176e62a03288ff870bdac243e44e311 +INFO:root:PassingDataObject: nmdc:cab1c5784feea8c0e140a024a0136b41 +INFO:root:PassingDataObject: nmdc:d9af78b42526d166941ce0f2b92e4946 +INFO:root:PassingDataObject: nmdc:3ee202c9076d6a998f81e4498749095f +INFO:root:PassingDataObject: nmdc:aa011778de4d2f547524ed4eaf1747b8 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138746 @@ -1182,49 +1182,49 @@ INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138748 INFO:root:found 1 records INFO:root:record: nmdc:4cbc930855e87f6cc3f2255b875ccade, ReadBased Analysis Activity for nmdc:mga00098 INFO:root:PassingDataObject: nmdc:4b9b8a064ac562bb209a28b9203715e4 -INFO:root:PassingDataObject: nmdc:de27878d63c710856c16a202fc2723b0 -INFO:root:PassingDataObject: nmdc:f9dd91546ac803303ebd1b86173e3ef5 INFO:root:PassingDataObject: nmdc:365db4e689e671081b33051b63444b89 -INFO:root:PassingDataObject: nmdc:a0dc69e2ec75448a58992a32eac14426 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:4cbc930855e87f6cc3f2255b875ccade +ERROR:root:FailedDataObject: nmdc:a3ae4c639da7381b7120bbd255ffa4b2, +ERROR:root:FailedDataObject: nmdc:f9dd91546ac803303ebd1b86173e3ef5, +ERROR:root:FailedDataObject: nmdc:de27878d63c710856c16a202fc2723b0, ERROR:root:FailedDataObject: nmdc:fd224efc944064e05cf8e2abde80082a, ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:4cbc930855e87f6cc3f2255b875ccade -ERROR:root:FailedDataObject: nmdc:a3ae4c639da7381b7120bbd255ffa4b2, +ERROR:root:FailedDataObject: nmdc:a0dc69e2ec75448a58992a32eac14426, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4cbc930855e87f6cc3f2255b875ccade, ReadBased Analysis Activity for nmdc:mga00098 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138748 INFO:root:found 1 records INFO:root:record: nmdc:4cbc930855e87f6cc3f2255b875ccade, Assembly Activity for nmdc:mga00098 -INFO:root:PassingDataObject: nmdc:ece40f6ad4cba50944ba432ed580ccbe INFO:root:PassingDataObject: nmdc:23180c63164c4420719172addb6fe325 +INFO:root:PassingDataObject: nmdc:ece40f6ad4cba50944ba432ed580ccbe INFO:root:PassingDataObject: nmdc:4a0ad7bf52dbaf125c49bdb6aacb34ad -INFO:root:PassingDataObject: nmdc:5247fbeae0759423c738b888ec0e7645 INFO:root:PassingDataObject: nmdc:a70203a1dd351901ca8661108d133f35 +INFO:root:PassingDataObject: nmdc:5247fbeae0759423c738b888ec0e7645 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138748 INFO:root:found 1 records INFO:root:record: nmdc:4cbc930855e87f6cc3f2255b875ccade, Annotation Activity for nmdc:mga00098 -INFO:root:PassingDataObject: nmdc:c4c1939ccba1a9c2a52c7af3885a29b7 +INFO:root:PassingDataObject: nmdc:8b58658002b9cafb55072a41ce287b85 INFO:root:PassingDataObject: nmdc:4d89832b76ef0ac3596bd6ceec314171 +INFO:root:PassingDataObject: nmdc:0076cabb745e8abe287c59a0d0297ad9 +INFO:root:PassingDataObject: nmdc:f4c795f1960578ffa07b63fc2ee36806 +INFO:root:PassingDataObject: nmdc:5ef469c34b57a0b9efe02cb63ab1ac21 +INFO:root:PassingDataObject: nmdc:50d454c121ec986ee0906cce1d622314 +INFO:root:PassingDataObject: nmdc:c4c1939ccba1a9c2a52c7af3885a29b7 INFO:root:PassingDataObject: nmdc:5627da70e8bf135adbcab46e6330d2c4 INFO:root:PassingDataObject: nmdc:0b4f4b73f72c7188ac7cffb10a799e69 -INFO:root:PassingDataObject: nmdc:8d4c35cb6cb4b755ff8b96a84e333bd8 -INFO:root:PassingDataObject: nmdc:0155f6b65551c71d2445a378d30b89f9 +INFO:root:PassingDataObject: nmdc:84c782dde47abb3439620dc6d30123bc INFO:root:PassingDataObject: nmdc:c5683645d2c2c0900fc59dc406a21004 -INFO:root:PassingDataObject: nmdc:3ad1053a463b0163818b29c38a1fe8dc -INFO:root:PassingDataObject: nmdc:b942296473b3deb53a037a3ea51f06e5 -INFO:root:PassingDataObject: nmdc:5ef469c34b57a0b9efe02cb63ab1ac21 -INFO:root:PassingDataObject: nmdc:50d454c121ec986ee0906cce1d622314 INFO:root:PassingDataObject: nmdc:f4fc64b42556420aeec04971f0d49f53 INFO:root:PassingDataObject: nmdc:64651f29480fe6bc89ea3bdddff65e81 +INFO:root:PassingDataObject: nmdc:8d4c35cb6cb4b755ff8b96a84e333bd8 +INFO:root:PassingDataObject: nmdc:3ad1053a463b0163818b29c38a1fe8dc INFO:root:PassingDataObject: nmdc:5028b46d04015d1f0e79a2210c43320b -INFO:root:PassingDataObject: nmdc:84c782dde47abb3439620dc6d30123bc -INFO:root:PassingDataObject: nmdc:0076cabb745e8abe287c59a0d0297ad9 -INFO:root:PassingDataObject: nmdc:8b58658002b9cafb55072a41ce287b85 INFO:root:PassingDataObject: nmdc:e21c5b3530e31e9ef4fc00990fef895a -INFO:root:PassingDataObject: nmdc:f4c795f1960578ffa07b63fc2ee36806 +INFO:root:PassingDataObject: nmdc:0155f6b65551c71d2445a378d30b89f9 +INFO:root:PassingDataObject: nmdc:b942296473b3deb53a037a3ea51f06e5 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138748 @@ -1243,56 +1243,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:300109666a890c8 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, Read QC Activity for nmdc:mga0f598 -INFO:root:PassingDataObject: nmdc:26469cdd3afb5ae9a6547fc32bf3d66b INFO:root:PassingDataObject: nmdc:8b8ac90292b803e8882c8aa601233c1e +INFO:root:PassingDataObject: nmdc:26469cdd3afb5ae9a6547fc32bf3d66b INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, ReadBased Analysis Activity for nmdc:mga0f598 -INFO:root:PassingDataObject: nmdc:a9addb084ba81228780189c80a5e476b +INFO:root:PassingDataObject: nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 INFO:root:PassingDataObject: nmdc:d09c43bc278b970afcd99c5b3ffbcc6e INFO:root:PassingDataObject: nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 -INFO:root:PassingDataObject: nmdc:884c00067757f3648d92db9366340b0d -INFO:root:PassingDataObject: nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 -INFO:root:PassingDataObject: nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 -INFO:root:PassingDataObject: nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 +INFO:root:PassingDataObject: nmdc:a9addb084ba81228780189c80a5e476b INFO:root:PassingDataObject: nmdc:5687b844cbf0af67dec593bde42fc7d4 +INFO:root:PassingDataObject: nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 INFO:root:PassingDataObject: nmdc:91ec7367b50f6379ec85b460dc5a1f68 +INFO:root:PassingDataObject: nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 +INFO:root:PassingDataObject: nmdc:884c00067757f3648d92db9366340b0d INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, Assembly Activity for nmdc:mga0f598 -INFO:root:PassingDataObject: nmdc:c3596a536ff27f6cd79edb26c6f99ab7 INFO:root:PassingDataObject: nmdc:fff62accdf55c847cfb8652e7e07662f -INFO:root:PassingDataObject: nmdc:65c2509060ad834fdd85acb62acf817c INFO:root:PassingDataObject: nmdc:9c2e16d42788048d6cfea18e7c102f84 +INFO:root:PassingDataObject: nmdc:c3596a536ff27f6cd79edb26c6f99ab7 +INFO:root:PassingDataObject: nmdc:65c2509060ad834fdd85acb62acf817c INFO:root:PassingDataObject: nmdc:818c1714f9de070016d6ddda3ecf5ea8 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, Annotation Activity for nmdc:mga0f598 -INFO:root:PassingDataObject: nmdc:9c86e518f743beec6bad862a7468d4af -INFO:root:PassingDataObject: nmdc:12cce38fcaf3b9192f6c8ef3f36126cf -INFO:root:PassingDataObject: nmdc:b806aeb54908d04ac692ac3860e99bcf -INFO:root:PassingDataObject: nmdc:26c4d22a143a79908af85078d25aab33 +INFO:root:PassingDataObject: nmdc:e60ca6c4b7261dfbd21b9ee8bf751b7b INFO:root:PassingDataObject: nmdc:b0c550c0b1dca0eeb76e1b34be7890a0 -INFO:root:PassingDataObject: nmdc:d7300a76d08faa027838ec7cd732a674 -INFO:root:PassingDataObject: nmdc:41e7b848cc5f7bdb966cf9f027d0f60c INFO:root:PassingDataObject: nmdc:97dfb7e270316186379590598933ad70 +INFO:root:PassingDataObject: nmdc:e34b16ccdb4393a678ce38c0a118d9fd +INFO:root:PassingDataObject: nmdc:26c4d22a143a79908af85078d25aab33 +INFO:root:PassingDataObject: nmdc:59ac6e19f2d4d21c0da75b23ca9c4bbe +INFO:root:PassingDataObject: nmdc:ea741c3127fcc9900e2a7f255b8b8580 +INFO:root:PassingDataObject: nmdc:d7300a76d08faa027838ec7cd732a674 +INFO:root:PassingDataObject: nmdc:9c86e518f743beec6bad862a7468d4af +INFO:root:PassingDataObject: nmdc:12cce38fcaf3b9192f6c8ef3f36126cf INFO:root:PassingDataObject: nmdc:8c51163630e1a74a8da571eba470183a -INFO:root:PassingDataObject: nmdc:682a0797991b19555085e493306ffc1e INFO:root:PassingDataObject: nmdc:5a69b09507a8920352797aa74a0be03d INFO:root:PassingDataObject: nmdc:6938d50145775a70b4758c3000be6042 -INFO:root:PassingDataObject: nmdc:59ac6e19f2d4d21c0da75b23ca9c4bbe -INFO:root:PassingDataObject: nmdc:bbdf0c76d7e7ab1a3c2b3e3e1720fdc1 -INFO:root:PassingDataObject: nmdc:db69bb5f46800d8e4c6d332682c2ed13 -INFO:root:PassingDataObject: nmdc:e34b16ccdb4393a678ce38c0a118d9fd +INFO:root:PassingDataObject: nmdc:682a0797991b19555085e493306ffc1e INFO:root:PassingDataObject: nmdc:31f058161ee0620370b587f17970151f -INFO:root:PassingDataObject: nmdc:ea741c3127fcc9900e2a7f255b8b8580 -INFO:root:PassingDataObject: nmdc:e60ca6c4b7261dfbd21b9ee8bf751b7b +INFO:root:PassingDataObject: nmdc:db69bb5f46800d8e4c6d332682c2ed13 +INFO:root:PassingDataObject: nmdc:b806aeb54908d04ac692ac3860e99bcf +INFO:root:PassingDataObject: nmdc:41e7b848cc5f7bdb966cf9f027d0f60c +INFO:root:PassingDataObject: nmdc:bbdf0c76d7e7ab1a3c2b3e3e1720fdc1 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138745 @@ -1311,22 +1311,22 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:796233a318facd2 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, Read QC Activity for nmdc:mga0mk61 -INFO:root:PassingDataObject: nmdc:e52aa0da41e13df52179487aafc60ed4 INFO:root:PassingDataObject: nmdc:ff3cd9483c04b1db219dead3372b780a +INFO:root:PassingDataObject: nmdc:e52aa0da41e13df52179487aafc60ed4 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, ReadBased Analysis Activity for nmdc:mga0mk61 +INFO:root:PassingDataObject: nmdc:c612e3e540471677da18cd7091985ff6 +INFO:root:PassingDataObject: nmdc:d488dc15a9c0d8ce0b9edddc454b1476 INFO:root:PassingDataObject: nmdc:afe3dda5cc6792097f63a436e2786dc3 -INFO:root:PassingDataObject: nmdc:88e0926f84e091144f8df2c592b89e39 INFO:root:PassingDataObject: nmdc:b1f3018fde1a7a7639dd85ee9642c1ea -INFO:root:PassingDataObject: nmdc:e062b1c8dd01341c6619c148562623f6 +INFO:root:PassingDataObject: nmdc:8494637a042ecd6b5470702eb662893a INFO:root:PassingDataObject: nmdc:90994cf49b3e84e51d7b313fd6c031a0 -INFO:root:PassingDataObject: nmdc:d488dc15a9c0d8ce0b9edddc454b1476 -INFO:root:PassingDataObject: nmdc:c612e3e540471677da18cd7091985ff6 INFO:root:PassingDataObject: nmdc:8b45157104eaa7e0662df1d80bbde27d -INFO:root:PassingDataObject: nmdc:8494637a042ecd6b5470702eb662893a +INFO:root:PassingDataObject: nmdc:88e0926f84e091144f8df2c592b89e39 +INFO:root:PassingDataObject: nmdc:e062b1c8dd01341c6619c148562623f6 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138739 @@ -1334,40 +1334,40 @@ INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, Assembly Activity for nmdc:mga0mk61 INFO:root:PassingDataObject: nmdc:97d82d36c70bcfc40201e7a9f12a67a3 INFO:root:PassingDataObject: nmdc:5f028a927e1fb1b8f71f9f541581db53 -INFO:root:PassingDataObject: nmdc:265810b4500a552b57966668fcc61562 -INFO:root:PassingDataObject: nmdc:4ecbb1a27c05366241dc5d12db878c37 INFO:root:PassingDataObject: nmdc:431a14b1d40aea16ab1597bfc3203611 +INFO:root:PassingDataObject: nmdc:4ecbb1a27c05366241dc5d12db878c37 +INFO:root:PassingDataObject: nmdc:265810b4500a552b57966668fcc61562 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, Annotation Activity for nmdc:mga0mk61 +INFO:root:PassingDataObject: nmdc:0640ce19cb38cd9ccebbb26b5c9f9182 +INFO:root:PassingDataObject: nmdc:cfcf143c4729735752b2a88f79836d31 +INFO:root:PassingDataObject: nmdc:68a58c06cd2ee30723b7ba91f09a178c INFO:root:PassingDataObject: nmdc:ea417fe53cd29b3dbdde8e6d21a6ea35 +INFO:root:PassingDataObject: nmdc:032433aea6d94d2a3a7ae1501ec540fb INFO:root:PassingDataObject: nmdc:d5627a37546246f224594c313fd4d48d -INFO:root:PassingDataObject: nmdc:cfcf143c4729735752b2a88f79836d31 INFO:root:PassingDataObject: nmdc:abf33cb2a82318d4c84cf00b91b32013 -INFO:root:PassingDataObject: nmdc:31f403691451249ff50a8fad9b494db7 -INFO:root:PassingDataObject: nmdc:ea544969b73a9c0bb91c6ab2b12228df -INFO:root:PassingDataObject: nmdc:317fef53c1628b43e6fcb2d1436158c0 +INFO:root:PassingDataObject: nmdc:d6192f5171ad9016bbd4cb0b697162d2 INFO:root:PassingDataObject: nmdc:238f8816563ae93e2c8a3238ddb268ee -INFO:root:PassingDataObject: nmdc:e1eb0872834f2b3c29a54a8891ccf55a -INFO:root:PassingDataObject: nmdc:9806ad01a838fea57ff7c971e389a00b -INFO:root:PassingDataObject: nmdc:032433aea6d94d2a3a7ae1501ec540fb -INFO:root:PassingDataObject: nmdc:0640ce19cb38cd9ccebbb26b5c9f9182 INFO:root:PassingDataObject: nmdc:519d8b744ce5f71b34a9f70efa7baf3e -INFO:root:PassingDataObject: nmdc:68a58c06cd2ee30723b7ba91f09a178c +INFO:root:PassingDataObject: nmdc:9806ad01a838fea57ff7c971e389a00b INFO:root:PassingDataObject: nmdc:689a9c6a9ad06fbc25e54d3b8f72a420 -INFO:root:PassingDataObject: nmdc:874865b0347965a58f3501fba575b34a -INFO:root:PassingDataObject: nmdc:f85bd744ec593a29fab2b8540ca6b6fe -INFO:root:PassingDataObject: nmdc:d6192f5171ad9016bbd4cb0b697162d2 INFO:root:PassingDataObject: nmdc:f2c53af5ac0aaad79c2c950600043596 +INFO:root:PassingDataObject: nmdc:f85bd744ec593a29fab2b8540ca6b6fe +INFO:root:PassingDataObject: nmdc:317fef53c1628b43e6fcb2d1436158c0 +INFO:root:PassingDataObject: nmdc:31f403691451249ff50a8fad9b494db7 +INFO:root:PassingDataObject: nmdc:874865b0347965a58f3501fba575b34a +INFO:root:PassingDataObject: nmdc:ea544969b73a9c0bb91c6ab2b12228df +INFO:root:PassingDataObject: nmdc:e1eb0872834f2b3c29a54a8891ccf55a INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, MAGs Analysis Activity for nmdc:mga0mk61 -INFO:root:PassingDataObject: nmdc:37098dec0e310e3b2c16141537e9e10d INFO:root:PassingDataObject: nmdc:5d3eeb386fdaaf4226826fb45fcacd92 +INFO:root:PassingDataObject: nmdc:37098dec0e310e3b2c16141537e9e10d INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138739 @@ -1379,56 +1379,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f31a2a473fa6cc0 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, Read QC Activity for nmdc:mga05n40 -INFO:root:PassingDataObject: nmdc:98833e75c0ec5a63b72fedf9cf7e02ee INFO:root:PassingDataObject: nmdc:6466fb06869fd45a23d98d3fbe6e476c +INFO:root:PassingDataObject: nmdc:98833e75c0ec5a63b72fedf9cf7e02ee INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, ReadBased Analysis Activity for nmdc:mga05n40 -INFO:root:PassingDataObject: nmdc:49112ae784f64075efdda656c18bd8ce +INFO:root:PassingDataObject: nmdc:cadb9ca59af1220df291b1982786e205 +INFO:root:PassingDataObject: nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 +INFO:root:PassingDataObject: nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 INFO:root:PassingDataObject: nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 -INFO:root:PassingDataObject: nmdc:fb18ee2cb8a08864dfca05d07865cdc2 -INFO:root:PassingDataObject: nmdc:38ccb457d30f57b11d2b94abb2b99179 INFO:root:PassingDataObject: nmdc:856a6c981be6986702dc534a6e386667 -INFO:root:PassingDataObject: nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 +INFO:root:PassingDataObject: nmdc:49112ae784f64075efdda656c18bd8ce INFO:root:PassingDataObject: nmdc:b983789d4379b8ad7c2712f396e3a603 -INFO:root:PassingDataObject: nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 -INFO:root:PassingDataObject: nmdc:cadb9ca59af1220df291b1982786e205 +INFO:root:PassingDataObject: nmdc:fb18ee2cb8a08864dfca05d07865cdc2 +INFO:root:PassingDataObject: nmdc:38ccb457d30f57b11d2b94abb2b99179 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, Assembly Activity for nmdc:mga05n40 -INFO:root:PassingDataObject: nmdc:53c302c537e38b9c59a2ae62ea5f69a9 -INFO:root:PassingDataObject: nmdc:a065964a2e48b46a460abe4a05dd8049 INFO:root:PassingDataObject: nmdc:0e9ba8eb0aafe70178dd33185777e9f2 +INFO:root:PassingDataObject: nmdc:53c302c537e38b9c59a2ae62ea5f69a9 INFO:root:PassingDataObject: nmdc:c66cc438d8fc6f160328734db1b44e4d +INFO:root:PassingDataObject: nmdc:a065964a2e48b46a460abe4a05dd8049 INFO:root:PassingDataObject: nmdc:75e4dbac293b74268199cf4dd725ad04 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, Annotation Activity for nmdc:mga05n40 -INFO:root:PassingDataObject: nmdc:60b91616c70568f1fd7f869cc63c790b -INFO:root:PassingDataObject: nmdc:db27d5b7911095f943c63d8715c6d521 -INFO:root:PassingDataObject: nmdc:c08251d1ea790d05424b0d90ec4ddd15 -INFO:root:PassingDataObject: nmdc:2a064367e46775a79912a770d1c2fd1c -INFO:root:PassingDataObject: nmdc:4419ee2d260c89b513c13fbf41c4b765 +INFO:root:PassingDataObject: nmdc:45f92c820c75efef1a94ff430582d644 +INFO:root:PassingDataObject: nmdc:671b2b38738ec621c4334c2fb54c1a26 +INFO:root:PassingDataObject: nmdc:866778e4ce54983385f258ee79585bcb INFO:root:PassingDataObject: nmdc:08daff6f10c3bf8efa8daa278c973b87 -INFO:root:PassingDataObject: nmdc:b245597fc59297fb68ef0a4cf4eec79e -INFO:root:PassingDataObject: nmdc:8d1fc61e2683d831875d54652e24a639 -INFO:root:PassingDataObject: nmdc:6feaea765378b6bcb5277b535817e87f +INFO:root:PassingDataObject: nmdc:f50d831c496aab8a06784bfcf872bc80 +INFO:root:PassingDataObject: nmdc:3578b482c0c463605390c5c7a003b3d9 +INFO:root:PassingDataObject: nmdc:5db8dd0e7e060fe38c0e48ff14ea4863 INFO:root:PassingDataObject: nmdc:9805b6f9e07499370876a4645fcd3200 -INFO:root:PassingDataObject: nmdc:866778e4ce54983385f258ee79585bcb +INFO:root:PassingDataObject: nmdc:c08251d1ea790d05424b0d90ec4ddd15 INFO:root:PassingDataObject: nmdc:de16eb63f56515ad65a821d19e5b3fe0 -INFO:root:PassingDataObject: nmdc:f50d831c496aab8a06784bfcf872bc80 INFO:root:PassingDataObject: nmdc:60dcf3ef844f42fd20b4095943b03688 -INFO:root:PassingDataObject: nmdc:5db8dd0e7e060fe38c0e48ff14ea4863 -INFO:root:PassingDataObject: nmdc:671b2b38738ec621c4334c2fb54c1a26 -INFO:root:PassingDataObject: nmdc:3578b482c0c463605390c5c7a003b3d9 -INFO:root:PassingDataObject: nmdc:45f92c820c75efef1a94ff430582d644 +INFO:root:PassingDataObject: nmdc:8d1fc61e2683d831875d54652e24a639 +INFO:root:PassingDataObject: nmdc:6feaea765378b6bcb5277b535817e87f +INFO:root:PassingDataObject: nmdc:b245597fc59297fb68ef0a4cf4eec79e +INFO:root:PassingDataObject: nmdc:2a064367e46775a79912a770d1c2fd1c INFO:root:PassingDataObject: nmdc:e20dc235311070f80d0958065b0f28a7 +INFO:root:PassingDataObject: nmdc:60b91616c70568f1fd7f869cc63c790b +INFO:root:PassingDataObject: nmdc:db27d5b7911095f943c63d8715c6d521 +INFO:root:PassingDataObject: nmdc:4419ee2d260c89b513c13fbf41c4b765 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138743 @@ -1447,63 +1447,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:86cb807a667b81f INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, Read QC Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:265f2da99dea8d10bf78c9c840b101c5 INFO:root:PassingDataObject: nmdc:64f78bbabad2f9d5ba81ba08d72548d4 +INFO:root:PassingDataObject: nmdc:265f2da99dea8d10bf78c9c840b101c5 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, ReadBased Analysis Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:cb644ed38eaf40f3d421cf555968f623 INFO:root:PassingDataObject: nmdc:7e5b88644c0e4b1953eae268202823e6 -INFO:root:PassingDataObject: nmdc:1b5b740ccf227209b54a7ceb6c860cfb -INFO:root:PassingDataObject: nmdc:8296f03d176afd095c8fa98f4c2f9662 +INFO:root:PassingDataObject: nmdc:6dde7b5c1e2cb869a10cb03312110709 +INFO:root:PassingDataObject: nmdc:8f614cde2154a1906f1ff5059c69b8f2 INFO:root:PassingDataObject: nmdc:658d593dbf5f8104188df08dc35153d1 INFO:root:PassingDataObject: nmdc:8492f8378ebb1740e86c75d0612d6e2c -INFO:root:PassingDataObject: nmdc:6dde7b5c1e2cb869a10cb03312110709 +INFO:root:PassingDataObject: nmdc:8296f03d176afd095c8fa98f4c2f9662 +INFO:root:PassingDataObject: nmdc:cb644ed38eaf40f3d421cf555968f623 +INFO:root:PassingDataObject: nmdc:1b5b740ccf227209b54a7ceb6c860cfb INFO:root:PassingDataObject: nmdc:e94829532f3107d64349e53f82828a89 -INFO:root:PassingDataObject: nmdc:8f614cde2154a1906f1ff5059c69b8f2 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, Assembly Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:37c66cf049a5cee03b98856ab11236c1 +INFO:root:PassingDataObject: nmdc:54289b50c6b631a097a827578534adf3 INFO:root:PassingDataObject: nmdc:df3d11a581736d44c9e90d559c9379d9 -INFO:root:PassingDataObject: nmdc:b5d55d570572552f4d613813073ede4c INFO:root:PassingDataObject: nmdc:a23021719050b58ba81e789c30b9c5c2 -INFO:root:PassingDataObject: nmdc:54289b50c6b631a097a827578534adf3 +INFO:root:PassingDataObject: nmdc:37c66cf049a5cee03b98856ab11236c1 +INFO:root:PassingDataObject: nmdc:b5d55d570572552f4d613813073ede4c INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, Annotation Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:2a7013736753878dd0b77c3783a136c0 +INFO:root:PassingDataObject: nmdc:3a4c2ccbb2f68aa97c3dc11cb686d494 INFO:root:PassingDataObject: nmdc:80a35ac9c027b46a71cb82947110a10e +INFO:root:PassingDataObject: nmdc:0a2da73a6fa64ea5233d74a4171a3794 +INFO:root:PassingDataObject: nmdc:4abc269a7b823bdb1876611b1a40e1f2 INFO:root:PassingDataObject: nmdc:53553365147ff38127d230a01f3ad5e0 -INFO:root:PassingDataObject: nmdc:0595d78754c142ee582c2e4cd1d99977 -INFO:root:PassingDataObject: nmdc:8a8f6671b5b6450e7fc716cf9b56b285 -INFO:root:PassingDataObject: nmdc:b4cb834d2bf279fe5b1508a18056bcdc -INFO:root:PassingDataObject: nmdc:bf246f264c5ae1ef44cca1bf5c7f6294 -INFO:root:PassingDataObject: nmdc:f97f27b7c86612f4cbd052acd262ee99 INFO:root:PassingDataObject: nmdc:110c8b05fc32cb5294a35afb7b475908 +INFO:root:PassingDataObject: nmdc:2a7013736753878dd0b77c3783a136c0 +INFO:root:PassingDataObject: nmdc:1756e669881651a558e2ae11d32e2a87 +INFO:root:PassingDataObject: nmdc:0595d78754c142ee582c2e4cd1d99977 INFO:root:PassingDataObject: nmdc:df59792bcb2335c1f31af8bf144d701f -INFO:root:PassingDataObject: nmdc:0a2da73a6fa64ea5233d74a4171a3794 -INFO:root:PassingDataObject: nmdc:2817cd142c612297af194a0b3d4021e8 +INFO:root:PassingDataObject: nmdc:ebb8dbd62d1caaa34e55165c4f21b8cd +INFO:root:PassingDataObject: nmdc:bf246f264c5ae1ef44cca1bf5c7f6294 +INFO:root:PassingDataObject: nmdc:8a8f6671b5b6450e7fc716cf9b56b285 INFO:root:PassingDataObject: nmdc:e0a94da3eef859f44533c4ed507859d0 -INFO:root:PassingDataObject: nmdc:1756e669881651a558e2ae11d32e2a87 -INFO:root:PassingDataObject: nmdc:4abc269a7b823bdb1876611b1a40e1f2 INFO:root:PassingDataObject: nmdc:e5d9052d26d099ee35089a987b2e4eba -INFO:root:PassingDataObject: nmdc:ebb8dbd62d1caaa34e55165c4f21b8cd INFO:root:PassingDataObject: nmdc:2e46315394e8e818dd954817922f8061 -INFO:root:PassingDataObject: nmdc:3a4c2ccbb2f68aa97c3dc11cb686d494 +INFO:root:PassingDataObject: nmdc:f97f27b7c86612f4cbd052acd262ee99 +INFO:root:PassingDataObject: nmdc:b4cb834d2bf279fe5b1508a18056bcdc +INFO:root:PassingDataObject: nmdc:2817cd142c612297af194a0b3d4021e8 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, MAGs Analysis Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:4fcdabda32a39777cc3f70cfe75b7348 INFO:root:PassingDataObject: nmdc:f215c49352dd0d60aa455a0f958ed0de +INFO:root:PassingDataObject: nmdc:4fcdabda32a39777cc3f70cfe75b7348 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138754 @@ -1515,56 +1515,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:20f714c290eeba8 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, Read QC Activity for nmdc:mga06977 -INFO:root:PassingDataObject: nmdc:f8ceed0240176014970c77f79f236ea3 INFO:root:PassingDataObject: nmdc:74b88ee74fbbbe184664ce624dee82e7 +INFO:root:PassingDataObject: nmdc:f8ceed0240176014970c77f79f236ea3 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, ReadBased Analysis Activity for nmdc:mga06977 -INFO:root:PassingDataObject: nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 +INFO:root:PassingDataObject: nmdc:551120d522b4a7a27545e1ff1236eb1e INFO:root:PassingDataObject: nmdc:2862a776261adad85107834fd8758312 -INFO:root:PassingDataObject: nmdc:fe403d58f13800b56e638d59ba96bf1b INFO:root:PassingDataObject: nmdc:04d59bf20f0ff4407ad1165408e38c7e -INFO:root:PassingDataObject: nmdc:5f29a30f9357988e214b88cd10a52701 -INFO:root:PassingDataObject: nmdc:faded304d5420687e5031b4fe13a41ba +INFO:root:PassingDataObject: nmdc:fe403d58f13800b56e638d59ba96bf1b INFO:root:PassingDataObject: nmdc:7e589a42f0014167292de74fb1f58ce8 -INFO:root:PassingDataObject: nmdc:551120d522b4a7a27545e1ff1236eb1e +INFO:root:PassingDataObject: nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 +INFO:root:PassingDataObject: nmdc:faded304d5420687e5031b4fe13a41ba INFO:root:PassingDataObject: nmdc:4ffbd2cae06ea7b62b2d529960325ba9 +INFO:root:PassingDataObject: nmdc:5f29a30f9357988e214b88cd10a52701 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, Assembly Activity for nmdc:mga06977 -INFO:root:PassingDataObject: nmdc:aa905d7c7838b5e43e15940dc5db2100 -INFO:root:PassingDataObject: nmdc:4c8eb256434693a67f66d81eb6fb926e INFO:root:PassingDataObject: nmdc:088807ac3d09db863fbf4d936fadad06 +INFO:root:PassingDataObject: nmdc:4c8eb256434693a67f66d81eb6fb926e INFO:root:PassingDataObject: nmdc:e049958d5490dbe3228712803d73095a INFO:root:PassingDataObject: nmdc:12d98e676b4d3155b2feec02a2cf8821 +INFO:root:PassingDataObject: nmdc:aa905d7c7838b5e43e15940dc5db2100 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, Annotation Activity for nmdc:mga06977 +INFO:root:PassingDataObject: nmdc:91836723fc0e82eb38cf099e38c6f550 +INFO:root:PassingDataObject: nmdc:e64eb9e9a94dfe2cc0aa4cf6379fa3a9 INFO:root:PassingDataObject: nmdc:7ee4de1f9fa45d28623b188d8af52e4a -INFO:root:PassingDataObject: nmdc:27a1a985cc21f516dd046c418bef8e36 -INFO:root:PassingDataObject: nmdc:7e94bc9a5abd5df7c1cbd6ac38cb71a5 -INFO:root:PassingDataObject: nmdc:1485d7a9b5b69926e94eb9840c32742a -INFO:root:PassingDataObject: nmdc:178387e291f8aa8b8261954249cc2c5c -INFO:root:PassingDataObject: nmdc:c34954d148301e96d50c8673123e1434 -INFO:root:PassingDataObject: nmdc:46999030f74e5a13940cf7f18b02c30b INFO:root:PassingDataObject: nmdc:9d4c9528e66589da0bf975205ea98619 INFO:root:PassingDataObject: nmdc:80443b91cab91b8b0cd9a88fb31b42cb +INFO:root:PassingDataObject: nmdc:46999030f74e5a13940cf7f18b02c30b +INFO:root:PassingDataObject: nmdc:c34954d148301e96d50c8673123e1434 INFO:root:PassingDataObject: nmdc:5293be4fa012594eb4820e97f0ee9390 -INFO:root:PassingDataObject: nmdc:1af282ef52c20652a1aa07cc518f98a0 INFO:root:PassingDataObject: nmdc:17f890eaf7c3d7f00d1fa713a67f5219 -INFO:root:PassingDataObject: nmdc:91836723fc0e82eb38cf099e38c6f550 -INFO:root:PassingDataObject: nmdc:e64eb9e9a94dfe2cc0aa4cf6379fa3a9 +INFO:root:PassingDataObject: nmdc:27a1a985cc21f516dd046c418bef8e36 INFO:root:PassingDataObject: nmdc:ebe8f682d6270e2703c1c6fff9f0df52 +INFO:root:PassingDataObject: nmdc:1af282ef52c20652a1aa07cc518f98a0 INFO:root:PassingDataObject: nmdc:f2b3569c45d3720610ecf1283f677b5f +INFO:root:PassingDataObject: nmdc:7e94bc9a5abd5df7c1cbd6ac38cb71a5 +INFO:root:PassingDataObject: nmdc:178387e291f8aa8b8261954249cc2c5c +INFO:root:PassingDataObject: nmdc:07274896045768dd45eb0e69130aed4c INFO:root:PassingDataObject: nmdc:40ebc7eabd507a85761f572322257ca3 +INFO:root:PassingDataObject: nmdc:1485d7a9b5b69926e94eb9840c32742a INFO:root:PassingDataObject: nmdc:10bcd84ac3ce3ea0a8ea4c8d8fd88b03 -INFO:root:PassingDataObject: nmdc:07274896045768dd45eb0e69130aed4c INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138751 @@ -1583,30 +1583,30 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b6d907e2b41d013 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, Read QC Activity for nmdc:mga0ks42 -INFO:root:PassingDataObject: nmdc:2b275b2fb125c7fc8d77bba7698f2311 INFO:root:PassingDataObject: nmdc:3b9b7f56b823fac39c7f82cc0355ec0c +INFO:root:PassingDataObject: nmdc:2b275b2fb125c7fc8d77bba7698f2311 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, ReadBased Analysis Activity for nmdc:mga0ks42 +INFO:root:PassingDataObject: nmdc:a3c7e366671c3d922125c2b82dde5f9b +INFO:root:PassingDataObject: nmdc:6b333856a7fa9bddb2e5b743bd8127c8 INFO:root:PassingDataObject: nmdc:756e0ac2425eda82f589d56a14e67c34 -INFO:root:PassingDataObject: nmdc:f46be59cb522b317b9bf738237940f0b +INFO:root:PassingDataObject: nmdc:7f2baf22b5f33bfda016c580f279bcb9 +INFO:root:PassingDataObject: nmdc:f1e7e173ce2a3730d05788c36ecc2350 INFO:root:PassingDataObject: nmdc:98228a7d2cc38ae730f6442175da7fbc INFO:root:PassingDataObject: nmdc:e2cab8bac20d35efc96806221abbf69d -INFO:root:PassingDataObject: nmdc:a3c7e366671c3d922125c2b82dde5f9b -INFO:root:PassingDataObject: nmdc:f1e7e173ce2a3730d05788c36ecc2350 -INFO:root:PassingDataObject: nmdc:7f2baf22b5f33bfda016c580f279bcb9 -INFO:root:PassingDataObject: nmdc:6b333856a7fa9bddb2e5b743bd8127c8 INFO:root:PassingDataObject: nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 +INFO:root:PassingDataObject: nmdc:f46be59cb522b317b9bf738237940f0b INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, Assembly Activity for nmdc:mga0ks42 +INFO:root:PassingDataObject: nmdc:9f05dd0954ff8fbee6eb09b1aa794355 INFO:root:PassingDataObject: nmdc:bdbaf92a5028414ae5e6dac2fb3314a8 INFO:root:PassingDataObject: nmdc:097282771962a8077194e4bd2e0e0f3b -INFO:root:PassingDataObject: nmdc:9f05dd0954ff8fbee6eb09b1aa794355 INFO:root:PassingDataObject: nmdc:f8aea25dcd7f29578c046109b9725092 INFO:root:PassingDataObject: nmdc:fbba44c97ee3c4de49c91d8609db8a51 INFO:root:passing_data_objects: 5 @@ -1614,32 +1614,32 @@ INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, Annotation Activity for nmdc:mga0ks42 -INFO:root:PassingDataObject: nmdc:c1b6a51c6904fc93d2990f7cd8b9cecb -INFO:root:PassingDataObject: nmdc:c42cf292fe57137fb4791be81c193e4d -INFO:root:PassingDataObject: nmdc:08b73086e8e649e41bae2e540095bdd5 -INFO:root:PassingDataObject: nmdc:2f53c7c9ec66b5c74256011808b6dcbf +INFO:root:PassingDataObject: nmdc:d12184b115e3467ff1e71d86dbd4af79 +INFO:root:PassingDataObject: nmdc:a5d17a6e4e268d3486295a4b975dafe5 INFO:root:PassingDataObject: nmdc:7627712b3624cc629b57e8add4b43f13 -INFO:root:PassingDataObject: nmdc:1d0aa540d59db67586b2c4ad2321e552 -INFO:root:PassingDataObject: nmdc:166262f75557e6ddbbcaeabc6241951f INFO:root:PassingDataObject: nmdc:ced5c9b479c23b9343c5415ba8b81e76 +INFO:root:PassingDataObject: nmdc:de12252612de497390e8b049780c43f0 +INFO:root:PassingDataObject: nmdc:08b73086e8e649e41bae2e540095bdd5 +INFO:root:PassingDataObject: nmdc:5a365aa8b77327cb82bfc37267b8b431 INFO:root:PassingDataObject: nmdc:056cb597c0b60df73546a518275ec9e5 +INFO:root:PassingDataObject: nmdc:3f1856a22acdbcb3546b6e1ea8db1eb2 +INFO:root:PassingDataObject: nmdc:c1b6a51c6904fc93d2990f7cd8b9cecb +INFO:root:PassingDataObject: nmdc:1d0aa540d59db67586b2c4ad2321e552 +INFO:root:PassingDataObject: nmdc:166262f75557e6ddbbcaeabc6241951f +INFO:root:PassingDataObject: nmdc:2f53c7c9ec66b5c74256011808b6dcbf +INFO:root:PassingDataObject: nmdc:2981798f653fafeae687e1e84f4efbbc +INFO:root:PassingDataObject: nmdc:9a79193ed416667e32cfc273d13fb700 +INFO:root:PassingDataObject: nmdc:c42cf292fe57137fb4791be81c193e4d INFO:root:PassingDataObject: nmdc:c62e921a15ab74a79c4d1f7dac258cc5 INFO:root:PassingDataObject: nmdc:58001acdbec4f269d83bcd14e5df4ede -INFO:root:PassingDataObject: nmdc:9a79193ed416667e32cfc273d13fb700 -INFO:root:PassingDataObject: nmdc:de12252612de497390e8b049780c43f0 -INFO:root:PassingDataObject: nmdc:d12184b115e3467ff1e71d86dbd4af79 -INFO:root:PassingDataObject: nmdc:2981798f653fafeae687e1e84f4efbbc -INFO:root:PassingDataObject: nmdc:3f1856a22acdbcb3546b6e1ea8db1eb2 INFO:root:PassingDataObject: nmdc:33d668128184e205fded7b34d008f9b8 -INFO:root:PassingDataObject: nmdc:a5d17a6e4e268d3486295a4b975dafe5 -INFO:root:PassingDataObject: nmdc:5a365aa8b77327cb82bfc37267b8b431 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, MAGs Analysis Activity for nmdc:mga0ks42 -INFO:root:PassingDataObject: nmdc:35338bd919685c5988648a7594ef135b INFO:root:PassingDataObject: nmdc:92ad1228b2803d14f20bf0fc63d0dbff +INFO:root:PassingDataObject: nmdc:35338bd919685c5988648a7594ef135b INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138749 @@ -1658,49 +1658,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138753 INFO:root:found 1 records INFO:root:record: nmdc:1cecb298d4e3892d33e60d5d3d71b029, ReadBased Analysis Activity for nmdc:mga0ak51 -INFO:root:PassingDataObject: nmdc:a10aad2d2f352298c72610a1556783ce -INFO:root:PassingDataObject: nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 -INFO:root:PassingDataObject: nmdc:44ae37842fd4075371a1503fd2540e5a -INFO:root:PassingDataObject: nmdc:66940e094d2be736538bf752d6e626c4 +INFO:root:PassingDataObject: nmdc:a867326eda4ad18701c2c2326295cc75 INFO:root:PassingDataObject: nmdc:079810154a4bc3cf9081189e81143815 +INFO:root:PassingDataObject: nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 INFO:root:PassingDataObject: nmdc:ff7c0af07a528819c97a37da0336d16f INFO:root:PassingDataObject: nmdc:7dd0500dee529770c19006368cdbf843 +INFO:root:PassingDataObject: nmdc:44ae37842fd4075371a1503fd2540e5a INFO:root:PassingDataObject: nmdc:7efb1644b8ac67406ac2bb3c9206518c -INFO:root:PassingDataObject: nmdc:a867326eda4ad18701c2c2326295cc75 +INFO:root:PassingDataObject: nmdc:a10aad2d2f352298c72610a1556783ce +INFO:root:PassingDataObject: nmdc:66940e094d2be736538bf752d6e626c4 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138753 INFO:root:found 1 records INFO:root:record: nmdc:1cecb298d4e3892d33e60d5d3d71b029, Assembly Activity for nmdc:mga0ak51 INFO:root:PassingDataObject: nmdc:90fe74a9b0acce7f2a60bcaad8181b37 -INFO:root:PassingDataObject: nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 +INFO:root:PassingDataObject: nmdc:0a519bd52b6c04196e219cea28b9828d INFO:root:PassingDataObject: nmdc:66485d8a5a362830e8c6de5e82b6da28 INFO:root:PassingDataObject: nmdc:4768cfee3cc465d50b6df29f0996ca96 -INFO:root:PassingDataObject: nmdc:0a519bd52b6c04196e219cea28b9828d +INFO:root:PassingDataObject: nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138753 INFO:root:found 1 records INFO:root:record: nmdc:1cecb298d4e3892d33e60d5d3d71b029, Annotation Activity for nmdc:mga0ak51 -INFO:root:PassingDataObject: nmdc:192fc2bd159f593be05abd29eecdca1f +INFO:root:PassingDataObject: nmdc:a16adbdcd904b83aac1578729343588e INFO:root:PassingDataObject: nmdc:c392740111c5ce6381b942b06361a4e4 -INFO:root:PassingDataObject: nmdc:51108534afb268072772ba932b196b90 -INFO:root:PassingDataObject: nmdc:d0b876ac6eff6c16afe8efebfbb274bf -INFO:root:PassingDataObject: nmdc:fb5944515ca540342851fc7af375c5c6 -INFO:root:PassingDataObject: nmdc:cbe6baff1917ba0f15f19d66c8157c48 INFO:root:PassingDataObject: nmdc:22bad3ec45f1240b0a92ba2c659b999d -INFO:root:PassingDataObject: nmdc:6cff3a6be704f71fa72e2acb107aa1e0 -INFO:root:PassingDataObject: nmdc:186016b2439acee419343e917c5e8422 -INFO:root:PassingDataObject: nmdc:198a4d3e7e06b0aef929b6f279eef846 -INFO:root:PassingDataObject: nmdc:a56a0a09ec0c46c83788f18c3ffb1774 -INFO:root:PassingDataObject: nmdc:fb21e36727cc2db290334b8e89b9b3fc -INFO:root:PassingDataObject: nmdc:ea4a2a09b0d87afc8bf30eee52f940a5 -INFO:root:PassingDataObject: nmdc:def660bd57d564f6aff37aa281d228ff +INFO:root:PassingDataObject: nmdc:5bfec9c3145df50dc000fb952b7b8e6a INFO:root:PassingDataObject: nmdc:b8bf2491d5451d0ad9a3c8a7f065ab52 +INFO:root:PassingDataObject: nmdc:192fc2bd159f593be05abd29eecdca1f INFO:root:PassingDataObject: nmdc:2694ba8ef0d05fe61953504290130b61 +INFO:root:PassingDataObject: nmdc:def660bd57d564f6aff37aa281d228ff INFO:root:PassingDataObject: nmdc:10098fac4a0c5d6f661a2d70b0731286 -INFO:root:PassingDataObject: nmdc:a16adbdcd904b83aac1578729343588e -INFO:root:PassingDataObject: nmdc:5bfec9c3145df50dc000fb952b7b8e6a +INFO:root:PassingDataObject: nmdc:fb21e36727cc2db290334b8e89b9b3fc +INFO:root:PassingDataObject: nmdc:198a4d3e7e06b0aef929b6f279eef846 +INFO:root:PassingDataObject: nmdc:51108534afb268072772ba932b196b90 +INFO:root:PassingDataObject: nmdc:ea4a2a09b0d87afc8bf30eee52f940a5 +INFO:root:PassingDataObject: nmdc:a56a0a09ec0c46c83788f18c3ffb1774 +INFO:root:PassingDataObject: nmdc:cbe6baff1917ba0f15f19d66c8157c48 +INFO:root:PassingDataObject: nmdc:fb5944515ca540342851fc7af375c5c6 +INFO:root:PassingDataObject: nmdc:6cff3a6be704f71fa72e2acb107aa1e0 +INFO:root:PassingDataObject: nmdc:186016b2439acee419343e917c5e8422 +INFO:root:PassingDataObject: nmdc:d0b876ac6eff6c16afe8efebfbb274bf INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138753 @@ -1726,56 +1726,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, ReadBased Analysis Activity for nmdc:mga0ax21 -INFO:root:PassingDataObject: nmdc:e06ae82ad46cf9579742536eb879c819 -INFO:root:PassingDataObject: nmdc:694174082a13290f789b435fea8bc451 -INFO:root:PassingDataObject: nmdc:f270aa128dd2057f3ef8ad0759e240ce -INFO:root:PassingDataObject: nmdc:5c282197ecceebb84a7f931fc2389f59 +INFO:root:PassingDataObject: nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 INFO:root:PassingDataObject: nmdc:8dfe0251b7531da70cde8e5a0d44686a +INFO:root:PassingDataObject: nmdc:f270aa128dd2057f3ef8ad0759e240ce +INFO:root:PassingDataObject: nmdc:e06ae82ad46cf9579742536eb879c819 +INFO:root:PassingDataObject: nmdc:638a10778451ae6f17dcea786424731d INFO:root:PassingDataObject: nmdc:8a62d3890a2dd25117f0a07c418adf8b -INFO:root:PassingDataObject: nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 +INFO:root:PassingDataObject: nmdc:5c282197ecceebb84a7f931fc2389f59 INFO:root:PassingDataObject: nmdc:ed6b118f66f2ade75aaca5e27b73304a -INFO:root:PassingDataObject: nmdc:638a10778451ae6f17dcea786424731d +INFO:root:PassingDataObject: nmdc:694174082a13290f789b435fea8bc451 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, Assembly Activity for nmdc:mga0ax21 -INFO:root:PassingDataObject: nmdc:9641980460af2b2b5b960022bfbe6ba5 +INFO:root:PassingDataObject: nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 INFO:root:PassingDataObject: nmdc:31fade0dbd18fdea0ff83bf51a220641 -INFO:root:PassingDataObject: nmdc:82f7cca2b2cb17816eaf5076c2119064 +INFO:root:PassingDataObject: nmdc:9641980460af2b2b5b960022bfbe6ba5 INFO:root:PassingDataObject: nmdc:eb266f15afb6a5af6bd054e1ce131d27 -INFO:root:PassingDataObject: nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 +INFO:root:PassingDataObject: nmdc:82f7cca2b2cb17816eaf5076c2119064 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, Annotation Activity for nmdc:mga0ax21 -INFO:root:PassingDataObject: nmdc:481d2d8fc1707b638992b2d8aa321d44 -INFO:root:PassingDataObject: nmdc:93dd3c5795f1f22db07b0d0d050575b3 -INFO:root:PassingDataObject: nmdc:e8c951a33616527c1dfbf7c60d16a140 -INFO:root:PassingDataObject: nmdc:7ad1c505886f1da1d97510c6b6559926 -INFO:root:PassingDataObject: nmdc:212ddd235565ee2a3a23f656ef5c11ef +INFO:root:PassingDataObject: nmdc:07db7f052e901f9658a22cb64a0dcc80 INFO:root:PassingDataObject: nmdc:2367a415cb17d5072c3d0dbc7df42497 INFO:root:PassingDataObject: nmdc:bba26d98e46f49112ebc85ff026bbbfe -INFO:root:PassingDataObject: nmdc:8a757f814f8127d836561112c8488e18 -INFO:root:PassingDataObject: nmdc:25728a5fe992ca53f01229aaa4ca883d -INFO:root:PassingDataObject: nmdc:867f9e3df24de3af8c465a4cc6fbc38f +INFO:root:PassingDataObject: nmdc:e8c951a33616527c1dfbf7c60d16a140 +INFO:root:PassingDataObject: nmdc:93dd3c5795f1f22db07b0d0d050575b3 INFO:root:PassingDataObject: nmdc:21f1b613e4c499b8440e446dc56dcb6e -INFO:root:PassingDataObject: nmdc:7f74a653aa175cb8af25d7a36d5e4049 +INFO:root:PassingDataObject: nmdc:b11a1e9aa66b412a75c487698e86c50f INFO:root:PassingDataObject: nmdc:e38fb29e57183c5b7303423f4366cd79 -INFO:root:PassingDataObject: nmdc:035167ba393f362b23d1594fbe5bf867 +INFO:root:PassingDataObject: nmdc:25728a5fe992ca53f01229aaa4ca883d +INFO:root:PassingDataObject: nmdc:481d2d8fc1707b638992b2d8aa321d44 INFO:root:PassingDataObject: nmdc:c15bb5be1c98ec6bc0d32820f1865607 -INFO:root:PassingDataObject: nmdc:b11a1e9aa66b412a75c487698e86c50f -INFO:root:PassingDataObject: nmdc:1d85780b7516a17cdf0a8130e7d6bf7a -INFO:root:PassingDataObject: nmdc:07db7f052e901f9658a22cb64a0dcc80 INFO:root:PassingDataObject: nmdc:6f3a915b03aeda1268fef75fffd189be +INFO:root:PassingDataObject: nmdc:8a757f814f8127d836561112c8488e18 +INFO:root:PassingDataObject: nmdc:035167ba393f362b23d1594fbe5bf867 +INFO:root:PassingDataObject: nmdc:7ad1c505886f1da1d97510c6b6559926 +INFO:root:PassingDataObject: nmdc:867f9e3df24de3af8c465a4cc6fbc38f +INFO:root:PassingDataObject: nmdc:7f74a653aa175cb8af25d7a36d5e4049 +INFO:root:PassingDataObject: nmdc:212ddd235565ee2a3a23f656ef5c11ef +INFO:root:PassingDataObject: nmdc:1d85780b7516a17cdf0a8130e7d6bf7a INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, MAGs Analysis Activity for nmdc:mga0ax21 -INFO:root:PassingDataObject: nmdc:2bdabe3b5cc97e738b32e452e7f5cf0f INFO:root:PassingDataObject: nmdc:56359f2efdc80e8d3fa33c417646e761 +INFO:root:PassingDataObject: nmdc:2bdabe3b5cc97e738b32e452e7f5cf0f INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138747 @@ -1794,57 +1794,57 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, ReadBased Analysis Activity for nmdc:mga06298 -INFO:root:PassingDataObject: nmdc:6c422a61df4e276560c743e42e8777ac -INFO:root:PassingDataObject: nmdc:edf5c75c8744c683a6c3507972e60cf5 -INFO:root:PassingDataObject: nmdc:2002afa4bc29e198da0a63382b69a6f8 INFO:root:PassingDataObject: nmdc:b5be335d73e9f43434f1f319dbe74602 +INFO:root:PassingDataObject: nmdc:8677affb1a3ae76bb8a9461603fc9e70 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:0f21da30e01f45f336e29ebd9f9ebf90 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:0f21da30e01f45f336e29ebd9f9ebf90 -ERROR:root:FailedDataObject: nmdc:8677affb1a3ae76bb8a9461603fc9e70, -ERROR:root:FailedDataObject: nmdc:441aef0e4396e5adfa1e6cc4db45aebe, ERROR:root:FailedDataObject: nmdc:4a4b1f88a4f6036b5df25f66eb530daa, +ERROR:root:FailedDataObject: nmdc:441aef0e4396e5adfa1e6cc4db45aebe, +ERROR:root:FailedDataObject: nmdc:2002afa4bc29e198da0a63382b69a6f8, +ERROR:root:FailedDataObject: nmdc:edf5c75c8744c683a6c3507972e60cf5, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:0f21da30e01f45f336e29ebd9f9ebf90 +ERROR:root:FailedDataObject: nmdc:6c422a61df4e276560c743e42e8777ac, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, ReadBased Analysis Activity for nmdc:mga06298 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, Assembly Activity for nmdc:mga06298 -INFO:root:PassingDataObject: nmdc:3590b9c13f477435cb210006c9a088f7 -INFO:root:PassingDataObject: nmdc:d10910d29200afd36fbb483323f78910 +INFO:root:PassingDataObject: nmdc:435db0d40b74bc58f7012375f95a22dc INFO:root:PassingDataObject: nmdc:f49b70f2b86bdf6ab8de63ae6af22f13 INFO:root:PassingDataObject: nmdc:f9fcb7512bd57f6854980c6305e72da6 -INFO:root:PassingDataObject: nmdc:435db0d40b74bc58f7012375f95a22dc +INFO:root:PassingDataObject: nmdc:d10910d29200afd36fbb483323f78910 +INFO:root:PassingDataObject: nmdc:3590b9c13f477435cb210006c9a088f7 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, Annotation Activity for nmdc:mga06298 -INFO:root:PassingDataObject: nmdc:5ffe451050d4fbcc4fb93d0c651930ab -INFO:root:PassingDataObject: nmdc:db89e43f96ec8c3ccd3524df4e9d0770 -INFO:root:PassingDataObject: nmdc:ee24adc352e764e6cee1cfecda6a5ad8 -INFO:root:PassingDataObject: nmdc:1e712a99872e63ddef10a987faec9b45 -INFO:root:PassingDataObject: nmdc:3ae66b0e3dfbb191f63d7dc8c4244e26 +INFO:root:PassingDataObject: nmdc:2992e4f3b779dec729a9d823c1aa3ad4 +INFO:root:PassingDataObject: nmdc:d6acef140a50fcc012ecfa7c9c558fef INFO:root:PassingDataObject: nmdc:79eeb9397774681d449c59997bd2d368 INFO:root:PassingDataObject: nmdc:709cfd47d101e6334780a379a162720a -INFO:root:PassingDataObject: nmdc:e55026bfb92d6ae37fe91a39fb817aa8 +INFO:root:PassingDataObject: nmdc:7aac85954e2ce8308c8f388cb3f0996e INFO:root:PassingDataObject: nmdc:534398cc155a9ef4dea674f45eb0137e -INFO:root:PassingDataObject: nmdc:2992e4f3b779dec729a9d823c1aa3ad4 -INFO:root:PassingDataObject: nmdc:9fce8be442004a4d2fed03d1da7079bb INFO:root:PassingDataObject: nmdc:dee146a18afbfe5c3cb1f78bb146f716 INFO:root:PassingDataObject: nmdc:eb91c541ef4cbf9604786cada7d6f4d4 -INFO:root:PassingDataObject: nmdc:7aac85954e2ce8308c8f388cb3f0996e -INFO:root:PassingDataObject: nmdc:e831668e4c7bd285620078e5c1245103 +INFO:root:PassingDataObject: nmdc:3ae66b0e3dfbb191f63d7dc8c4244e26 +INFO:root:PassingDataObject: nmdc:cf7c5ca97046cc4e0e6a70864452eda2 +INFO:root:PassingDataObject: nmdc:e55026bfb92d6ae37fe91a39fb817aa8 INFO:root:PassingDataObject: nmdc:295aea96cf9041f2e13f8b92e0edf174 +INFO:root:PassingDataObject: nmdc:e831668e4c7bd285620078e5c1245103 +INFO:root:PassingDataObject: nmdc:9fce8be442004a4d2fed03d1da7079bb +INFO:root:PassingDataObject: nmdc:1e712a99872e63ddef10a987faec9b45 +INFO:root:PassingDataObject: nmdc:ee24adc352e764e6cee1cfecda6a5ad8 INFO:root:PassingDataObject: nmdc:fa2c29098e45cf7c77455820ef4afb9a -INFO:root:PassingDataObject: nmdc:cf7c5ca97046cc4e0e6a70864452eda2 -INFO:root:PassingDataObject: nmdc:d6acef140a50fcc012ecfa7c9c558fef +INFO:root:PassingDataObject: nmdc:db89e43f96ec8c3ccd3524df4e9d0770 +INFO:root:PassingDataObject: nmdc:5ffe451050d4fbcc4fb93d0c651930ab INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, MAGs Analysis Activity for nmdc:mga06298 -INFO:root:PassingDataObject: nmdc:e51316bc0f7ba609fe4d84d9e8de1f04 INFO:root:PassingDataObject: nmdc:243a2e856cf6ae825dd09c52756e9a95 +INFO:root:PassingDataObject: nmdc:e51316bc0f7ba609fe4d84d9e8de1f04 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138752 @@ -1856,56 +1856,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0afe727fea9effc INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, Read QC Activity for nmdc:mga0cc74 -INFO:root:PassingDataObject: nmdc:9a24dab0d27071262c4fa2ae54edb2e7 INFO:root:PassingDataObject: nmdc:c927288230899c93bdf28348fc87b222 +INFO:root:PassingDataObject: nmdc:9a24dab0d27071262c4fa2ae54edb2e7 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, ReadBased Analysis Activity for nmdc:mga0cc74 INFO:root:PassingDataObject: nmdc:cd2fe7285199963f3a867971c9274343 -INFO:root:PassingDataObject: nmdc:6df14e79b47a45571745ac1d9577ff55 -INFO:root:PassingDataObject: nmdc:3b99bfd06b67f44f2529e87d3f90327d -INFO:root:PassingDataObject: nmdc:f737a4e9be8426619b91ab3e6cc0a681 INFO:root:PassingDataObject: nmdc:21d2f0e1bd49b66eb71b6ce2599ee503 -INFO:root:PassingDataObject: nmdc:788e20bad88f057e08bb1a9ef55d1050 +INFO:root:PassingDataObject: nmdc:3b99bfd06b67f44f2529e87d3f90327d +INFO:root:PassingDataObject: nmdc:6df14e79b47a45571745ac1d9577ff55 INFO:root:PassingDataObject: nmdc:eaa014c659b30a6c17fb6650d11ab769 -INFO:root:PassingDataObject: nmdc:854c197884c2ba55cb13d2b9eb3f4c8e +INFO:root:PassingDataObject: nmdc:788e20bad88f057e08bb1a9ef55d1050 INFO:root:PassingDataObject: nmdc:71d35d455a16985e82f221b57abb662d +INFO:root:PassingDataObject: nmdc:f737a4e9be8426619b91ab3e6cc0a681 +INFO:root:PassingDataObject: nmdc:854c197884c2ba55cb13d2b9eb3f4c8e INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, Assembly Activity for nmdc:mga0cc74 INFO:root:PassingDataObject: nmdc:508ec6f2b952632f50ecdd8c68db34fb -INFO:root:PassingDataObject: nmdc:a2107a8bc1a5ae7c52b27320e1bb34e2 INFO:root:PassingDataObject: nmdc:243925579b9f4fb9ae43011ced963695 -INFO:root:PassingDataObject: nmdc:1f32e6cfc089edd4d67844621dd5e9ac +INFO:root:PassingDataObject: nmdc:a2107a8bc1a5ae7c52b27320e1bb34e2 INFO:root:PassingDataObject: nmdc:6aabe721c4a7185940b57f413e551390 +INFO:root:PassingDataObject: nmdc:1f32e6cfc089edd4d67844621dd5e9ac INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, Annotation Activity for nmdc:mga0cc74 -INFO:root:PassingDataObject: nmdc:2ffc11a6fa92e580f0aeee2864e83dee -INFO:root:PassingDataObject: nmdc:29c7a6cec513bb3707055530213bcca2 -INFO:root:PassingDataObject: nmdc:fdd1a028483e33733954f52efa0f8cd9 -INFO:root:PassingDataObject: nmdc:af527514713d74f2952a05d657905a65 -INFO:root:PassingDataObject: nmdc:21279872e8a060917882b5011706dce1 -INFO:root:PassingDataObject: nmdc:93f8805563b3e4626d585c52831334c2 -INFO:root:PassingDataObject: nmdc:94409385b8940b5494d5503a9b6f6ac2 INFO:root:PassingDataObject: nmdc:9720ba31335efa8e153de035d59cb45c +INFO:root:PassingDataObject: nmdc:29c7a6cec513bb3707055530213bcca2 INFO:root:PassingDataObject: nmdc:3be4ecc188907180e0fe1b0f886e9958 -INFO:root:PassingDataObject: nmdc:3dacf6b9e33fc5cf0eb65d37dc7f7962 -INFO:root:PassingDataObject: nmdc:a95c9d2684e9f84d37a675785e99b28c -INFO:root:PassingDataObject: nmdc:443a40650cf71bb9644e93505b53b584 INFO:root:PassingDataObject: nmdc:e31f60b50614555bef034bba6e800728 INFO:root:PassingDataObject: nmdc:37f98b72ebf6ef5fffa5e007339c1aa4 -INFO:root:PassingDataObject: nmdc:e496ad9f5505976721f83631f2151936 -INFO:root:PassingDataObject: nmdc:b1340ffd145638653e009fb35169c6f3 -INFO:root:PassingDataObject: nmdc:29a79f42a43f5241de6bf84f4e0dc424 INFO:root:PassingDataObject: nmdc:4480d59bdc1a3fb6a72b02086a0b168c +INFO:root:PassingDataObject: nmdc:3dacf6b9e33fc5cf0eb65d37dc7f7962 +INFO:root:PassingDataObject: nmdc:2ffc11a6fa92e580f0aeee2864e83dee +INFO:root:PassingDataObject: nmdc:21279872e8a060917882b5011706dce1 +INFO:root:PassingDataObject: nmdc:93f8805563b3e4626d585c52831334c2 +INFO:root:PassingDataObject: nmdc:29a79f42a43f5241de6bf84f4e0dc424 INFO:root:PassingDataObject: nmdc:2f3824e27f3daa5c3d0cefe661b54062 +INFO:root:PassingDataObject: nmdc:af527514713d74f2952a05d657905a65 +INFO:root:PassingDataObject: nmdc:b1340ffd145638653e009fb35169c6f3 +INFO:root:PassingDataObject: nmdc:fdd1a028483e33733954f52efa0f8cd9 +INFO:root:PassingDataObject: nmdc:a95c9d2684e9f84d37a675785e99b28c +INFO:root:PassingDataObject: nmdc:443a40650cf71bb9644e93505b53b584 +INFO:root:PassingDataObject: nmdc:e496ad9f5505976721f83631f2151936 +INFO:root:PassingDataObject: nmdc:94409385b8940b5494d5503a9b6f6ac2 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138756 @@ -1924,63 +1924,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b0638ba985a67df INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, Read QC Activity for nmdc:mga0v998 -INFO:root:PassingDataObject: nmdc:80bafe68c83e4be83b2ada0e5f1dee0c INFO:root:PassingDataObject: nmdc:36d4295f78e33152b9f0a2d60eaf4648 +INFO:root:PassingDataObject: nmdc:80bafe68c83e4be83b2ada0e5f1dee0c INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, ReadBased Analysis Activity for nmdc:mga0v998 -INFO:root:PassingDataObject: nmdc:cca621d7bee98da5f55ccbcf3f296342 INFO:root:PassingDataObject: nmdc:187ed60485c2a08b6fde0191a4332f3b INFO:root:PassingDataObject: nmdc:8c484cee43b39868f216cfc9f89e77ba -INFO:root:PassingDataObject: nmdc:d55beb8645eff57d8806666e570d2d3e -INFO:root:PassingDataObject: nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 +INFO:root:PassingDataObject: nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 INFO:root:PassingDataObject: nmdc:d61542ab86302b9f661b10e7a90c9bb1 -INFO:root:PassingDataObject: nmdc:fe7efd7d37ed3c916db73af90e6b4656 +INFO:root:PassingDataObject: nmdc:cca621d7bee98da5f55ccbcf3f296342 +INFO:root:PassingDataObject: nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 INFO:root:PassingDataObject: nmdc:78972c7f2b3eb2c6ae4041ae696aae90 -INFO:root:PassingDataObject: nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 +INFO:root:PassingDataObject: nmdc:d55beb8645eff57d8806666e570d2d3e +INFO:root:PassingDataObject: nmdc:fe7efd7d37ed3c916db73af90e6b4656 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, Assembly Activity for nmdc:mga0v998 INFO:root:PassingDataObject: nmdc:3d92c122124714a61cdedd87dc2e460d -INFO:root:PassingDataObject: nmdc:108c62768293874eb901fa014d98c07a +INFO:root:PassingDataObject: nmdc:b9135feeee2c737cd11c9ff504e87689 INFO:root:PassingDataObject: nmdc:2e0348e43569d2a8b15c9ba4796af819 +INFO:root:PassingDataObject: nmdc:108c62768293874eb901fa014d98c07a INFO:root:PassingDataObject: nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f -INFO:root:PassingDataObject: nmdc:b9135feeee2c737cd11c9ff504e87689 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, Annotation Activity for nmdc:mga0v998 -INFO:root:PassingDataObject: nmdc:00914ce09c851219c3a31dc529c12fa0 -INFO:root:PassingDataObject: nmdc:53d5ba3bcd55905036bb01f1c6511569 -INFO:root:PassingDataObject: nmdc:539e7611cb5f4369f32e846112d35685 -INFO:root:PassingDataObject: nmdc:820e8cdcfdb20475881246befac20b5d -INFO:root:PassingDataObject: nmdc:39211ac51085cf49b17f735a9badb3bb -INFO:root:PassingDataObject: nmdc:f796e6276621646e8b57cf1be1521891 -INFO:root:PassingDataObject: nmdc:52723c61fd123544bc2b4446ae2cb56f +INFO:root:PassingDataObject: nmdc:7a6eabbd03ad27ffc06049b155535cf9 INFO:root:PassingDataObject: nmdc:890ef0d74c1f6ca75a218f5ea085141c INFO:root:PassingDataObject: nmdc:19b2392db2bf373101f1e3e9a168e2a7 -INFO:root:PassingDataObject: nmdc:7a6eabbd03ad27ffc06049b155535cf9 -INFO:root:PassingDataObject: nmdc:8b130f5a554394acc83fecb796d4b4db -INFO:root:PassingDataObject: nmdc:c7ebc2c733f940860c075c216bc0edc0 +INFO:root:PassingDataObject: nmdc:53d5ba3bcd55905036bb01f1c6511569 INFO:root:PassingDataObject: nmdc:322de8109bec500b6e8a4ce32e248654 -INFO:root:PassingDataObject: nmdc:e1987a4c7fe19b1a38fd23160a305063 +INFO:root:PassingDataObject: nmdc:f796e6276621646e8b57cf1be1521891 +INFO:root:PassingDataObject: nmdc:8b130f5a554394acc83fecb796d4b4db INFO:root:PassingDataObject: nmdc:dbe6917a6b943cfa586cc8453ed3e8cd +INFO:root:PassingDataObject: nmdc:820e8cdcfdb20475881246befac20b5d +INFO:root:PassingDataObject: nmdc:e1987a4c7fe19b1a38fd23160a305063 +INFO:root:PassingDataObject: nmdc:39211ac51085cf49b17f735a9badb3bb +INFO:root:PassingDataObject: nmdc:2822cd42988fd5b05558782aa1389f62 INFO:root:PassingDataObject: nmdc:3151d14197caa94c14704d5c490cd656 +INFO:root:PassingDataObject: nmdc:539e7611cb5f4369f32e846112d35685 +INFO:root:PassingDataObject: nmdc:c7ebc2c733f940860c075c216bc0edc0 INFO:root:PassingDataObject: nmdc:9b030203060e81edb8ea324dbd6b1ce9 -INFO:root:PassingDataObject: nmdc:2822cd42988fd5b05558782aa1389f62 +INFO:root:PassingDataObject: nmdc:00914ce09c851219c3a31dc529c12fa0 +INFO:root:PassingDataObject: nmdc:52723c61fd123544bc2b4446ae2cb56f INFO:root:PassingDataObject: nmdc:08ccb3a3d80869578a39a51837498642 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, MAGs Analysis Activity for nmdc:mga0v998 -INFO:root:PassingDataObject: nmdc:90764008f8ec0179b25654ea200774f5 INFO:root:PassingDataObject: nmdc:277aa42284aacc782436f05b35763182 +INFO:root:PassingDataObject: nmdc:90764008f8ec0179b25654ea200774f5 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138750 @@ -1992,63 +1992,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:087821706edc18d INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, Read QC Activity for nmdc:mga0zr57 -INFO:root:PassingDataObject: nmdc:7c5ac69dd2d1161ed0df49e112752296 INFO:root:PassingDataObject: nmdc:585ad0fedbbd08dfea2d28a7b3ad6ccd +INFO:root:PassingDataObject: nmdc:7c5ac69dd2d1161ed0df49e112752296 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, ReadBased Analysis Activity for nmdc:mga0zr57 -INFO:root:PassingDataObject: nmdc:b46b161f2f61fe392d93059b2ec257ad -INFO:root:PassingDataObject: nmdc:4fa688952a54066e7aa33a62c42ef037 -INFO:root:PassingDataObject: nmdc:0dac6f4bf0bcf2b06450acb586b411f2 +INFO:root:PassingDataObject: nmdc:1f7cc34d80fb00b557c9636a1a495b27 INFO:root:PassingDataObject: nmdc:5065c2a76ab916e8866d3836cd469534 +INFO:root:PassingDataObject: nmdc:4fa688952a54066e7aa33a62c42ef037 +INFO:root:PassingDataObject: nmdc:f355a874a6d82e6bf13bfd516cebbdd1 INFO:root:PassingDataObject: nmdc:45b079f76ebc5363d5e31b67968a90f7 INFO:root:PassingDataObject: nmdc:4a8c6bb81833bd93fb2941c292dc743e -INFO:root:PassingDataObject: nmdc:f355a874a6d82e6bf13bfd516cebbdd1 -INFO:root:PassingDataObject: nmdc:1f7cc34d80fb00b557c9636a1a495b27 +INFO:root:PassingDataObject: nmdc:b46b161f2f61fe392d93059b2ec257ad INFO:root:PassingDataObject: nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 +INFO:root:PassingDataObject: nmdc:0dac6f4bf0bcf2b06450acb586b411f2 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, Assembly Activity for nmdc:mga0zr57 -INFO:root:PassingDataObject: nmdc:ade85cb793b2c8272aab74e8064c4d94 -INFO:root:PassingDataObject: nmdc:689a1c1553dd39e32b2b089b33f05e7d -INFO:root:PassingDataObject: nmdc:40212546ef6fdee6393a1e05c23c4722 INFO:root:PassingDataObject: nmdc:2051c3848f8882f76acca2240af778ee INFO:root:PassingDataObject: nmdc:4a2f73f009c688aee3294b7bfb0f5d8f +INFO:root:PassingDataObject: nmdc:ade85cb793b2c8272aab74e8064c4d94 +INFO:root:PassingDataObject: nmdc:40212546ef6fdee6393a1e05c23c4722 +INFO:root:PassingDataObject: nmdc:689a1c1553dd39e32b2b089b33f05e7d INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, Annotation Activity for nmdc:mga0zr57 -INFO:root:PassingDataObject: nmdc:d87c7b26d832cb593a036002180af0cb +INFO:root:PassingDataObject: nmdc:47a839d3bd970f10561df111fe4498b6 INFO:root:PassingDataObject: nmdc:17026eb88c6b8ca1646a63155991d3a0 -INFO:root:PassingDataObject: nmdc:cd106d54776419d9d36e8bae493f6d76 +INFO:root:PassingDataObject: nmdc:5d0e221bd1858596b7398f51a0c7be7c INFO:root:PassingDataObject: nmdc:6570df23e8028c7b73aa0211cae8f081 -INFO:root:PassingDataObject: nmdc:a8e4a85b9f9c80f6d26fb8f9f36283f3 -INFO:root:PassingDataObject: nmdc:95420e60a53b31b4469dd81f8a3476af -INFO:root:PassingDataObject: nmdc:c53d2c466de78da687550f49a41c85eb +INFO:root:PassingDataObject: nmdc:cd106d54776419d9d36e8bae493f6d76 INFO:root:PassingDataObject: nmdc:d92cac3892e5ffa68766ff050cbea4bc -INFO:root:PassingDataObject: nmdc:fa5063f9effae7f0cc32c6f97e7b748c -INFO:root:PassingDataObject: nmdc:bd3fa2935a63140cec1b2f78186f6538 INFO:root:PassingDataObject: nmdc:339e252b7462307fb7579ec64fcfc67a -INFO:root:PassingDataObject: nmdc:cf2d91ff20575c0f5108c32b98e17b66 -INFO:root:PassingDataObject: nmdc:f63b72f56612c987c3633dba5cf19f93 -INFO:root:PassingDataObject: nmdc:907e1fc53c263a466bf6ef9f80c64e30 +INFO:root:PassingDataObject: nmdc:78083dfc890ae2e08b040f9245588d92 +INFO:root:PassingDataObject: nmdc:fa5063f9effae7f0cc32c6f97e7b748c INFO:root:PassingDataObject: nmdc:1a3929bd9de59fd7e7cd95267350a4ba -INFO:root:PassingDataObject: nmdc:47a839d3bd970f10561df111fe4498b6 -INFO:root:PassingDataObject: nmdc:5d0e221bd1858596b7398f51a0c7be7c +INFO:root:PassingDataObject: nmdc:c53d2c466de78da687550f49a41c85eb +INFO:root:PassingDataObject: nmdc:907e1fc53c263a466bf6ef9f80c64e30 +INFO:root:PassingDataObject: nmdc:f63b72f56612c987c3633dba5cf19f93 +INFO:root:PassingDataObject: nmdc:d87c7b26d832cb593a036002180af0cb +INFO:root:PassingDataObject: nmdc:a8e4a85b9f9c80f6d26fb8f9f36283f3 +INFO:root:PassingDataObject: nmdc:95420e60a53b31b4469dd81f8a3476af +INFO:root:PassingDataObject: nmdc:bd3fa2935a63140cec1b2f78186f6538 INFO:root:PassingDataObject: nmdc:d424b33d3d044ecd47bddcf1e75e1ea3 -INFO:root:PassingDataObject: nmdc:78083dfc890ae2e08b040f9245588d92 +INFO:root:PassingDataObject: nmdc:cf2d91ff20575c0f5108c32b98e17b66 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, MAGs Analysis Activity for nmdc:mga0zr57 -INFO:root:PassingDataObject: nmdc:90216e81897093b423bd74b62c79b93f INFO:root:PassingDataObject: nmdc:f47a9c6a3ba86999c2bcabb1bf6cfef6 +INFO:root:PassingDataObject: nmdc:90216e81897093b423bd74b62c79b93f INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138755 @@ -2060,8 +2060,8 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9a18a44f56928a2 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138760 INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, Read QC Activity for nmdc:mga0bn46 -INFO:root:PassingDataObject: nmdc:907d264ce66897366174ab1c9ac87b88 INFO:root:PassingDataObject: nmdc:0597993d81c0788daf5974490cef7f40 +INFO:root:PassingDataObject: nmdc:907d264ce66897366174ab1c9ac87b88 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138760 @@ -2069,47 +2069,47 @@ INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, ReadBased Analysis Activity for nmdc:mga0bn46 INFO:root:PassingDataObject: nmdc:3689750ab107b9a250599dc304de7a02 INFO:root:PassingDataObject: nmdc:9e4b3a8a0bde60626d00d335248b5eb8 -INFO:root:PassingDataObject: nmdc:fdbcf2b451e44e40f0afa535371531c4 +INFO:root:PassingDataObject: nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 +INFO:root:PassingDataObject: nmdc:23c0c12d2aeaf1080ca536fa7695d7ac +INFO:root:PassingDataObject: nmdc:7bddcb460f521571aa422eb79cfeb24a INFO:root:PassingDataObject: nmdc:04e4304630e24100383eae8a58c8579c +INFO:root:PassingDataObject: nmdc:fdbcf2b451e44e40f0afa535371531c4 INFO:root:PassingDataObject: nmdc:4d575a3c8ac62938cf78cea02d3d57bc -INFO:root:PassingDataObject: nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 INFO:root:PassingDataObject: nmdc:dc6ab16aa3a0073a1914e885cb463655 -INFO:root:PassingDataObject: nmdc:7bddcb460f521571aa422eb79cfeb24a -INFO:root:PassingDataObject: nmdc:23c0c12d2aeaf1080ca536fa7695d7ac INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138760 INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, Assembly Activity for nmdc:mga0bn46 -INFO:root:PassingDataObject: nmdc:0e0836aceb5837d49208da0304223b6a +INFO:root:PassingDataObject: nmdc:61f37cef4009a10fe186a734cc66df57 INFO:root:PassingDataObject: nmdc:29712e8e940103416e599270361200fd -INFO:root:PassingDataObject: nmdc:41fcb1932d70ad158bd64467f587a7e9 INFO:root:PassingDataObject: nmdc:019f39760fdc004add2ee15e6f96b695 -INFO:root:PassingDataObject: nmdc:61f37cef4009a10fe186a734cc66df57 +INFO:root:PassingDataObject: nmdc:41fcb1932d70ad158bd64467f587a7e9 +INFO:root:PassingDataObject: nmdc:0e0836aceb5837d49208da0304223b6a INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138760 INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, Annotation Activity for nmdc:mga0bn46 -INFO:root:PassingDataObject: nmdc:de5a7745734909fd6920a2e409cc7bdd -INFO:root:PassingDataObject: nmdc:730b2026c67d6815cac52bf6dca62eea -INFO:root:PassingDataObject: nmdc:307cfc8b79bca1354400c72fc3d23b33 -INFO:root:PassingDataObject: nmdc:f2dd383c83182aad458055a6f34815c7 -INFO:root:PassingDataObject: nmdc:868393c5f697f07f909f49352bd75ca1 -INFO:root:PassingDataObject: nmdc:7bf85dc29e4f1f9c56984b8dcd69a24a -INFO:root:PassingDataObject: nmdc:fd1829c2e254158910c000feafe53e53 +INFO:root:PassingDataObject: nmdc:4959d6c93fb9255a0abc12d789b31d0a INFO:root:PassingDataObject: nmdc:6241fab001dfdd86b4cd1bf35f04cac2 -INFO:root:PassingDataObject: nmdc:8dc3556f5e05ccd75d10d1276c32248e INFO:root:PassingDataObject: nmdc:1f25c1b265fca41bdadd1f0eb1face51 +INFO:root:PassingDataObject: nmdc:7bf85dc29e4f1f9c56984b8dcd69a24a INFO:root:PassingDataObject: nmdc:ade9d20d7f692cfedc292c15d158d283 -INFO:root:PassingDataObject: nmdc:33ccb09e5ece2a73dfba3a5d09dd161c +INFO:root:PassingDataObject: nmdc:f2dd383c83182aad458055a6f34815c7 INFO:root:PassingDataObject: nmdc:b58995cdb5b939193ad4afd0f351eaf6 -INFO:root:PassingDataObject: nmdc:eaf38bc13e6a330501c6c72f64c98355 +INFO:root:PassingDataObject: nmdc:33ccb09e5ece2a73dfba3a5d09dd161c INFO:root:PassingDataObject: nmdc:9c5befa5a91ba9649576d8a3876ab898 +INFO:root:PassingDataObject: nmdc:fd1829c2e254158910c000feafe53e53 +INFO:root:PassingDataObject: nmdc:eaf38bc13e6a330501c6c72f64c98355 +INFO:root:PassingDataObject: nmdc:730b2026c67d6815cac52bf6dca62eea INFO:root:PassingDataObject: nmdc:6741858b335b1eee6fafbb3229a87fae -INFO:root:PassingDataObject: nmdc:19a90fea6aacf28a34b0582d77a21558 -INFO:root:PassingDataObject: nmdc:4959d6c93fb9255a0abc12d789b31d0a +INFO:root:PassingDataObject: nmdc:868393c5f697f07f909f49352bd75ca1 +INFO:root:PassingDataObject: nmdc:8dc3556f5e05ccd75d10d1276c32248e INFO:root:PassingDataObject: nmdc:80977c36a42bd6955108843bb6247a83 +INFO:root:PassingDataObject: nmdc:de5a7745734909fd6920a2e409cc7bdd +INFO:root:PassingDataObject: nmdc:307cfc8b79bca1354400c72fc3d23b33 +INFO:root:PassingDataObject: nmdc:19a90fea6aacf28a34b0582d77a21558 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138760 @@ -2135,56 +2135,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, ReadBased Analysis Activity for nmdc:mga0q218 -INFO:root:PassingDataObject: nmdc:22ae2a542b60fd0a56c098eef57d0a6d INFO:root:PassingDataObject: nmdc:b7792943f7c8945b0bb5ac090138dc47 INFO:root:PassingDataObject: nmdc:4db292aa09f3bd8064dd7898f2b1d33f INFO:root:PassingDataObject: nmdc:9b62a2b2be1c8f92ae1350b08ee06b8c +INFO:root:PassingDataObject: nmdc:22ae2a542b60fd0a56c098eef57d0a6d INFO:root:PassingDataObject: nmdc:cd0e56f9403edd807ddb8ac2058df494 -INFO:root:PassingDataObject: nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d -INFO:root:PassingDataObject: nmdc:c23a5200a4850523bf1b71eb2df31cb9 INFO:root:PassingDataObject: nmdc:257e2026c3edbe6bb07c5e97d47fa33a +INFO:root:PassingDataObject: nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d INFO:root:PassingDataObject: nmdc:2ce3f4a57144426843cb82a9c36c23f9 +INFO:root:PassingDataObject: nmdc:c23a5200a4850523bf1b71eb2df31cb9 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, Assembly Activity for nmdc:mga0q218 -INFO:root:PassingDataObject: nmdc:ee11987d24b07a3e387659dab2b99980 -INFO:root:PassingDataObject: nmdc:84aaf5070762e47f15b2d54581545ae9 INFO:root:PassingDataObject: nmdc:16f600725c836803f8a3cc62ec884669 -INFO:root:PassingDataObject: nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb INFO:root:PassingDataObject: nmdc:73859fd8b67980b7c1a3cb631229f115 +INFO:root:PassingDataObject: nmdc:ee11987d24b07a3e387659dab2b99980 +INFO:root:PassingDataObject: nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb +INFO:root:PassingDataObject: nmdc:84aaf5070762e47f15b2d54581545ae9 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, Annotation Activity for nmdc:mga0q218 -INFO:root:PassingDataObject: nmdc:e8315390ed3636c7f93ab4c33b29669f -INFO:root:PassingDataObject: nmdc:bf76f21006977a925cb3f8060cad8f3a -INFO:root:PassingDataObject: nmdc:036508ba2c006c93738d2a31cc24446f -INFO:root:PassingDataObject: nmdc:261c00531c2d69bd4071a56e8ac198fc -INFO:root:PassingDataObject: nmdc:fecd69b1263d37746e3a696f2313d46b -INFO:root:PassingDataObject: nmdc:dec243019b9431efb34fa1c16f478edb -INFO:root:PassingDataObject: nmdc:ce82ec130d73ab431827889719122bb0 +INFO:root:PassingDataObject: nmdc:2b1c6c715797a18175685584fa82704c +INFO:root:PassingDataObject: nmdc:b778a3ebf9cb4dc78fe900d00ed7aac6 +INFO:root:PassingDataObject: nmdc:868f7c2348a1e9ef52b7b210400bd366 INFO:root:PassingDataObject: nmdc:01037ec8538c67c4db400a8df201f0f9 -INFO:root:PassingDataObject: nmdc:67bd8aa78ff8b56fb36668d62af4adb6 +INFO:root:PassingDataObject: nmdc:c5e17e9aa7db09bcd540d412cddb85fe +INFO:root:PassingDataObject: nmdc:587a03ec4f74dac64601f6174ca5319d INFO:root:PassingDataObject: nmdc:c25838ecbaca88cfa49024b5a54e862c INFO:root:PassingDataObject: nmdc:62f04f8104493ab3670ef55c487b5f70 -INFO:root:PassingDataObject: nmdc:4615115751d8fb276763023ca9d4253f +INFO:root:PassingDataObject: nmdc:e8315390ed3636c7f93ab4c33b29669f INFO:root:PassingDataObject: nmdc:624dacbebe47a50bac1370b2d1050f0b -INFO:root:PassingDataObject: nmdc:868f7c2348a1e9ef52b7b210400bd366 -INFO:root:PassingDataObject: nmdc:c5e17e9aa7db09bcd540d412cddb85fe -INFO:root:PassingDataObject: nmdc:2b1c6c715797a18175685584fa82704c -INFO:root:PassingDataObject: nmdc:587a03ec4f74dac64601f6174ca5319d +INFO:root:PassingDataObject: nmdc:fecd69b1263d37746e3a696f2313d46b +INFO:root:PassingDataObject: nmdc:4615115751d8fb276763023ca9d4253f +INFO:root:PassingDataObject: nmdc:036508ba2c006c93738d2a31cc24446f +INFO:root:PassingDataObject: nmdc:dec243019b9431efb34fa1c16f478edb +INFO:root:PassingDataObject: nmdc:ce82ec130d73ab431827889719122bb0 INFO:root:PassingDataObject: nmdc:eee853cbe7e328376938c4bffb1ac835 -INFO:root:PassingDataObject: nmdc:b778a3ebf9cb4dc78fe900d00ed7aac6 +INFO:root:PassingDataObject: nmdc:261c00531c2d69bd4071a56e8ac198fc +INFO:root:PassingDataObject: nmdc:67bd8aa78ff8b56fb36668d62af4adb6 +INFO:root:PassingDataObject: nmdc:bf76f21006977a925cb3f8060cad8f3a INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, MAGs Analysis Activity for nmdc:mga0q218 -INFO:root:PassingDataObject: nmdc:a210b954d0c0e8fce6c0d5cd337be0c6 INFO:root:PassingDataObject: nmdc:033e5e2d1b0e01bc421de9fe4b30b7d3 +INFO:root:PassingDataObject: nmdc:a210b954d0c0e8fce6c0d5cd337be0c6 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138758 @@ -2196,63 +2196,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f5b5e247913c5cd INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, Read QC Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:2429c25a417bf079f40db7740183c833 INFO:root:PassingDataObject: nmdc:bf4fe5773ebb36e816a55d34c1c54e16 +INFO:root:PassingDataObject: nmdc:2429c25a417bf079f40db7740183c833 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, ReadBased Analysis Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:f54d6d4971f33c2e6018c7cc01d70c54 -INFO:root:PassingDataObject: nmdc:60d3c830723011c4663fc54d3b9ae8c2 INFO:root:PassingDataObject: nmdc:4c8cadd89f3b28a31a7b72eceae2274c +INFO:root:PassingDataObject: nmdc:60d3c830723011c4663fc54d3b9ae8c2 +INFO:root:PassingDataObject: nmdc:f54d6d4971f33c2e6018c7cc01d70c54 +INFO:root:PassingDataObject: nmdc:c2d98178b8c9f57abb06a362726ae64b INFO:root:PassingDataObject: nmdc:0b1b076e94e33b1417cf8ba0df8ed51f INFO:root:PassingDataObject: nmdc:47ef66b14c923740694c368b2f34bb36 -INFO:root:PassingDataObject: nmdc:99c2b08cc001838f05c50dea136449a4 -INFO:root:PassingDataObject: nmdc:88596ee0da2e8edd19fd39c208757bd2 INFO:root:PassingDataObject: nmdc:86bfc9d51061a804c95430240541b5ae -INFO:root:PassingDataObject: nmdc:c2d98178b8c9f57abb06a362726ae64b +INFO:root:PassingDataObject: nmdc:88596ee0da2e8edd19fd39c208757bd2 +INFO:root:PassingDataObject: nmdc:99c2b08cc001838f05c50dea136449a4 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, Assembly Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:c7278c2de111b4ee333e3c0bef8edd6c INFO:root:PassingDataObject: nmdc:6ddc048297ca0e8ac05ca27697d05a43 INFO:root:PassingDataObject: nmdc:1da0fbcf3afbbfc32bf938ee99f6d01e INFO:root:PassingDataObject: nmdc:328dbf8d5b36a966e33f6e58bf429850 INFO:root:PassingDataObject: nmdc:bc422981525ab9157c3208633b332fb4 +INFO:root:PassingDataObject: nmdc:c7278c2de111b4ee333e3c0bef8edd6c INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, Annotation Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:8b655316ee1e40021b492014ded9d912 -INFO:root:PassingDataObject: nmdc:81230be560b9299d1a21509c80ff4c43 -INFO:root:PassingDataObject: nmdc:2027b59b5dcd91a497da17228a52691e -INFO:root:PassingDataObject: nmdc:31da3a4bb36e97b537a8d6e87a996ec8 +INFO:root:PassingDataObject: nmdc:5c01428ee9bd4b11b80200deb6d24489 INFO:root:PassingDataObject: nmdc:c0c617b4c8b301b82c08f90af440920a -INFO:root:PassingDataObject: nmdc:0d9c1a0fb336e56bb7facebad150ef00 -INFO:root:PassingDataObject: nmdc:e6d6a03a6e198618bdaaed8cd1e89f51 +INFO:root:PassingDataObject: nmdc:debbfaee244c70191cb5be49806e1523 +INFO:root:PassingDataObject: nmdc:95e3eb18c32072024b444afd9009d35a +INFO:root:PassingDataObject: nmdc:3a952b40f57f0a6d62ab7ad5f668664d INFO:root:PassingDataObject: nmdc:0eef63e595ab45b25f013d705054f1c2 +INFO:root:PassingDataObject: nmdc:e6d6a03a6e198618bdaaed8cd1e89f51 +INFO:root:PassingDataObject: nmdc:2027b59b5dcd91a497da17228a52691e +INFO:root:PassingDataObject: nmdc:31da3a4bb36e97b537a8d6e87a996ec8 +INFO:root:PassingDataObject: nmdc:614651ce4684a8f30c8979b9957cf5a9 +INFO:root:PassingDataObject: nmdc:9c0cfffaf9f8c0e1487faeaf78cdfca8 +INFO:root:PassingDataObject: nmdc:81230be560b9299d1a21509c80ff4c43 +INFO:root:PassingDataObject: nmdc:fefb001056c2143fe609cd61037d547d INFO:root:PassingDataObject: nmdc:bf27ab158b63fc7edd6f418763c9b23f +INFO:root:PassingDataObject: nmdc:0d9c1a0fb336e56bb7facebad150ef00 INFO:root:PassingDataObject: nmdc:2aa4c91f4d075c9b4bc030959181291f -INFO:root:PassingDataObject: nmdc:5c01428ee9bd4b11b80200deb6d24489 -INFO:root:PassingDataObject: nmdc:614651ce4684a8f30c8979b9957cf5a9 -INFO:root:PassingDataObject: nmdc:95e3eb18c32072024b444afd9009d35a -INFO:root:PassingDataObject: nmdc:a5ad7c97b5072a1aff01b329e23097c9 -INFO:root:PassingDataObject: nmdc:3a952b40f57f0a6d62ab7ad5f668664d INFO:root:PassingDataObject: nmdc:e5a37efa47743649ad6b4957346ca00a -INFO:root:PassingDataObject: nmdc:debbfaee244c70191cb5be49806e1523 -INFO:root:PassingDataObject: nmdc:fefb001056c2143fe609cd61037d547d -INFO:root:PassingDataObject: nmdc:9c0cfffaf9f8c0e1487faeaf78cdfca8 +INFO:root:PassingDataObject: nmdc:a5ad7c97b5072a1aff01b329e23097c9 +INFO:root:PassingDataObject: nmdc:8b655316ee1e40021b492014ded9d912 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, MAGs Analysis Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:3b8dbe284f312d92fe34549072258f52 INFO:root:PassingDataObject: nmdc:3b5e629858bf9f55bb11aed5e6004d84 +INFO:root:PassingDataObject: nmdc:3b8dbe284f312d92fe34549072258f52 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138759 @@ -2264,64 +2264,64 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:5333beedf0b1a6a INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, Read QC Activity for nmdc:mga01v18 -INFO:root:PassingDataObject: nmdc:a5152db67096ea0f81fb877973aba00f INFO:root:PassingDataObject: nmdc:3615e5d3379aae0d85bd244bb25b42a7 +INFO:root:PassingDataObject: nmdc:a5152db67096ea0f81fb877973aba00f INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, ReadBased Analysis Activity for nmdc:mga01v18 -INFO:root:PassingDataObject: nmdc:f2b52b572c0373c72f8f26d9618b9cb0 INFO:root:PassingDataObject: nmdc:2773b3a2eb23e390faad4e7d32f1bc31 -INFO:root:PassingDataObject: nmdc:d00d119e08edcb163485792a7ce8d5fa -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:613c66031f3a5c73716b02ade1cef55a -ERROR:root:FailedDataObject: nmdc:dae0faa18cf1eabe702e127c8aa4125c, +INFO:root:PassingDataObject: nmdc:4f4b5b5e33eb7820a6dbbf93ea8c8fbd +INFO:root:PassingDataObject: nmdc:dae0faa18cf1eabe702e127c8aa4125c ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:613c66031f3a5c73716b02ade1cef55a +ERROR:root:FailedDataObject: nmdc:d00d119e08edcb163485792a7ce8d5fa, +ERROR:root:FailedDataObject: nmdc:f2b52b572c0373c72f8f26d9618b9cb0, ERROR:root:FailedDataObject: nmdc:592714700d2296bcdf6aa4558bdfc0aa, -ERROR:root:FailedDataObject: nmdc:4f4b5b5e33eb7820a6dbbf93ea8c8fbd, ERROR:root:FailedDataObject: nmdc:77430d607016d4c31d260ca6dda18297, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:613c66031f3a5c73716b02ade1cef55a ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:613c66031f3a5c73716b02ade1cef55a, ReadBased Analysis Activity for nmdc:mga01v18 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, Assembly Activity for nmdc:mga01v18 +INFO:root:PassingDataObject: nmdc:df3e85ecef6137d5317d4993902353dd INFO:root:PassingDataObject: nmdc:37161ecacc5fc6ec47914e6fff906a80 -INFO:root:PassingDataObject: nmdc:28f86aa5f580484f8e6a8c86fccb5810 INFO:root:PassingDataObject: nmdc:b28dcf7c7b102b69889cbbedf4baa355 -INFO:root:PassingDataObject: nmdc:df3e85ecef6137d5317d4993902353dd INFO:root:PassingDataObject: nmdc:e288183958c6d58c8e30c89e10eb4ae7 +INFO:root:PassingDataObject: nmdc:28f86aa5f580484f8e6a8c86fccb5810 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, Annotation Activity for nmdc:mga01v18 INFO:root:PassingDataObject: nmdc:091e64a5f406cfb573914ba47069b764 -INFO:root:PassingDataObject: nmdc:c031febacc5e07f7ac07e1c020829a73 -INFO:root:PassingDataObject: nmdc:750dcf4d970a9d3abdd4c31d54bd318e -INFO:root:PassingDataObject: nmdc:a0c73a24bae29ef314852c09d69ee46b INFO:root:PassingDataObject: nmdc:b9f5cb09b64a9ed86471446a84979bca -INFO:root:PassingDataObject: nmdc:d3a129b0fd9ef4b82ec43e1a9006a54d -INFO:root:PassingDataObject: nmdc:28cc9221e7f9672d7a795e671e52b2e0 -INFO:root:PassingDataObject: nmdc:36de686275f2f79249d0f2c2fe0afdbd -INFO:root:PassingDataObject: nmdc:467f5b38df1ff25b05c4dccd5a05a9e6 -INFO:root:PassingDataObject: nmdc:55d879f8c2ede34d3dd5ad35346e4166 -INFO:root:PassingDataObject: nmdc:77da754ecfb09510e55be7fed1ed024b -INFO:root:PassingDataObject: nmdc:fbecaaaa10d978b57de4b51b03403322 -INFO:root:PassingDataObject: nmdc:e285d912f4b57efe6c3c2ff4123bcf2b INFO:root:PassingDataObject: nmdc:3a6e545cef97bf23c1be9fd8688b5451 +INFO:root:PassingDataObject: nmdc:fbecaaaa10d978b57de4b51b03403322 +INFO:root:PassingDataObject: nmdc:a0c73a24bae29ef314852c09d69ee46b +INFO:root:PassingDataObject: nmdc:77da754ecfb09510e55be7fed1ed024b INFO:root:PassingDataObject: nmdc:18e046ad8dc7c4a62fa014cc4b05d981 +INFO:root:PassingDataObject: nmdc:467f5b38df1ff25b05c4dccd5a05a9e6 INFO:root:PassingDataObject: nmdc:c651e136777c2f0a579a01affd9510b1 -INFO:root:PassingDataObject: nmdc:439a7c65c974033ed218029502e1b774 -INFO:root:PassingDataObject: nmdc:957da35feb8639cb3f45ba330689a3e3 +INFO:root:PassingDataObject: nmdc:c031febacc5e07f7ac07e1c020829a73 +INFO:root:PassingDataObject: nmdc:e285d912f4b57efe6c3c2ff4123bcf2b +INFO:root:PassingDataObject: nmdc:55d879f8c2ede34d3dd5ad35346e4166 INFO:root:PassingDataObject: nmdc:4a5922f89ac6ca5af7904db23bb37184 +INFO:root:PassingDataObject: nmdc:957da35feb8639cb3f45ba330689a3e3 +INFO:root:PassingDataObject: nmdc:439a7c65c974033ed218029502e1b774 +INFO:root:PassingDataObject: nmdc:750dcf4d970a9d3abdd4c31d54bd318e +INFO:root:PassingDataObject: nmdc:d3a129b0fd9ef4b82ec43e1a9006a54d +INFO:root:PassingDataObject: nmdc:36de686275f2f79249d0f2c2fe0afdbd +INFO:root:PassingDataObject: nmdc:28cc9221e7f9672d7a795e671e52b2e0 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, MAGs Analysis Activity for nmdc:mga01v18 -INFO:root:PassingDataObject: nmdc:2a622ee1ac7fc4c725127bbb06ee9851 INFO:root:PassingDataObject: nmdc:60e241298428930d63db7fab1b94c1bb +INFO:root:PassingDataObject: nmdc:2a622ee1ac7fc4c725127bbb06ee9851 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138757 @@ -2340,57 +2340,57 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, ReadBased Analysis Activity for nmdc:mga0mp52 -INFO:root:PassingDataObject: nmdc:c8c0c6d46571baea281342f5ff91de37 -INFO:root:PassingDataObject: nmdc:a63d0beada28634e20ccfa00eb9743af -INFO:root:PassingDataObject: nmdc:641dbcb1c7df646a0aecac1e0f8fa53d -INFO:root:PassingDataObject: nmdc:520c60f3291ad53775b51cc0fca25d7b +INFO:root:PassingDataObject: nmdc:c6543df54529af9301d47353fb48477d ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f -ERROR:root:FailedDataObject: nmdc:c6543df54529af9301d47353fb48477d, -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f ERROR:root:FailedDataObject: nmdc:6c9e3d9698730b3baab9a001d82d7a52, ERROR:root:FailedDataObject: nmdc:2e086c5762834ed4289f11e2df06bc3e, +ERROR:root:FailedDataObject: nmdc:641dbcb1c7df646a0aecac1e0f8fa53d, +ERROR:root:FailedDataObject: nmdc:520c60f3291ad53775b51cc0fca25d7b, +ERROR:root:FailedDataObject: nmdc:a63d0beada28634e20ccfa00eb9743af, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f +ERROR:root:FailedDataObject: nmdc:c8c0c6d46571baea281342f5ff91de37, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, ReadBased Analysis Activity for nmdc:mga0mp52 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, Assembly Activity for nmdc:mga0mp52 +INFO:root:PassingDataObject: nmdc:94d4aa6301b03d885c76019351617a45 +INFO:root:PassingDataObject: nmdc:913d2163dd05fab3fc0d9a829a1f91d0 INFO:root:PassingDataObject: nmdc:f9c1313dfb5523d45f828410e805dedc INFO:root:PassingDataObject: nmdc:3deb0d9239ccc9a6603327b7bebb5dbb -INFO:root:PassingDataObject: nmdc:913d2163dd05fab3fc0d9a829a1f91d0 -INFO:root:PassingDataObject: nmdc:94d4aa6301b03d885c76019351617a45 INFO:root:PassingDataObject: nmdc:cecd611724e7889fb632c205f67b85cd INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, Annotation Activity for nmdc:mga0mp52 -INFO:root:PassingDataObject: nmdc:ba33f3d4de0d123911b792df87db75e4 -INFO:root:PassingDataObject: nmdc:8eacdd4b48a167ed1c5f3bbb7733b222 -INFO:root:PassingDataObject: nmdc:e6bacfbf5eabaa43162491564fc09dd3 -INFO:root:PassingDataObject: nmdc:f3eb8d79d253c27a6d1fadf64d34df52 -INFO:root:PassingDataObject: nmdc:f07fff4cc47ea27ccec79b3901d77bd6 +INFO:root:PassingDataObject: nmdc:2a355c2825b6243cad291efab77fcab4 INFO:root:PassingDataObject: nmdc:902b562ed2fe7f457d3f311516540746 -INFO:root:PassingDataObject: nmdc:e3ee49f2b58be4361b9aada53b3d2173 -INFO:root:PassingDataObject: nmdc:028f96e163b14143bb23ceaeb656b28d +INFO:root:PassingDataObject: nmdc:f07fff4cc47ea27ccec79b3901d77bd6 +INFO:root:PassingDataObject: nmdc:41e453ebe29b544a8c446b2bc80ea150 +INFO:root:PassingDataObject: nmdc:f925f773d4bd65d6290130e280a3c557 INFO:root:PassingDataObject: nmdc:bba76f787ac2bb7164708421c4163137 -INFO:root:PassingDataObject: nmdc:a104ff0a654182bf216d7733aa123bba +INFO:root:PassingDataObject: nmdc:a6944f08dabfa0c343d18ce109d538e5 INFO:root:PassingDataObject: nmdc:e97de12425204304a66944be29063b10 +INFO:root:PassingDataObject: nmdc:69db56257ba1037535deb2b837af863e INFO:root:PassingDataObject: nmdc:c9df8e748be5bc8a550f99944c825f3c +INFO:root:PassingDataObject: nmdc:a104ff0a654182bf216d7733aa123bba +INFO:root:PassingDataObject: nmdc:8eacdd4b48a167ed1c5f3bbb7733b222 INFO:root:PassingDataObject: nmdc:ff20996adaabd9d13c9a81db871c9692 -INFO:root:PassingDataObject: nmdc:2a355c2825b6243cad291efab77fcab4 -INFO:root:PassingDataObject: nmdc:41e453ebe29b544a8c446b2bc80ea150 +INFO:root:PassingDataObject: nmdc:f3eb8d79d253c27a6d1fadf64d34df52 +INFO:root:PassingDataObject: nmdc:e3ee49f2b58be4361b9aada53b3d2173 +INFO:root:PassingDataObject: nmdc:028f96e163b14143bb23ceaeb656b28d +INFO:root:PassingDataObject: nmdc:e6bacfbf5eabaa43162491564fc09dd3 INFO:root:PassingDataObject: nmdc:628b1e5ec8ca3dfcdd0207b520198b9e -INFO:root:PassingDataObject: nmdc:f925f773d4bd65d6290130e280a3c557 -INFO:root:PassingDataObject: nmdc:a6944f08dabfa0c343d18ce109d538e5 -INFO:root:PassingDataObject: nmdc:69db56257ba1037535deb2b837af863e +INFO:root:PassingDataObject: nmdc:ba33f3d4de0d123911b792df87db75e4 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, MAGs Analysis Activity for nmdc:mga0mp52 -INFO:root:PassingDataObject: nmdc:bc2cdc95f944caffbc694d1c66b014b2 INFO:root:PassingDataObject: nmdc:0d127e74d0043818ce9fd85289f75b28 +INFO:root:PassingDataObject: nmdc:bc2cdc95f944caffbc694d1c66b014b2 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138762 @@ -2409,49 +2409,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208359 INFO:root:found 1 records INFO:root:record: nmdc:a7817ed507f90c680b7c8d87df25bfdc, ReadBased Analysis Activity for nmdc:mga0hr43 +INFO:root:PassingDataObject: nmdc:663b83cb3df49f525de52ae963570a18 +INFO:root:PassingDataObject: nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d INFO:root:PassingDataObject: nmdc:10c60ea0bc3112617748a056e3d10884 -INFO:root:PassingDataObject: nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 -INFO:root:PassingDataObject: nmdc:a701444fa38828c5e0d8e91c25042a19 INFO:root:PassingDataObject: nmdc:3cc4b117ac9f1d11bb908f5ad8e51567 -INFO:root:PassingDataObject: nmdc:62fa4c63db827ce9f26ca242f04d6ee7 -INFO:root:PassingDataObject: nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d -INFO:root:PassingDataObject: nmdc:3ee5d7b361966acd41d3026be09f6153 INFO:root:PassingDataObject: nmdc:6e04f5f38c4b5bba26ffff78245aa752 -INFO:root:PassingDataObject: nmdc:663b83cb3df49f525de52ae963570a18 +INFO:root:PassingDataObject: nmdc:3ee5d7b361966acd41d3026be09f6153 +INFO:root:PassingDataObject: nmdc:62fa4c63db827ce9f26ca242f04d6ee7 +INFO:root:PassingDataObject: nmdc:a701444fa38828c5e0d8e91c25042a19 +INFO:root:PassingDataObject: nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208359 INFO:root:found 1 records INFO:root:record: nmdc:a7817ed507f90c680b7c8d87df25bfdc, Assembly Activity for nmdc:mga0hr43 -INFO:root:PassingDataObject: nmdc:9c313ddb8f3093a92880762319e44582 -INFO:root:PassingDataObject: nmdc:342fad07e0559d930a7946f9470b9108 INFO:root:PassingDataObject: nmdc:f7ef26cb6f3ea8041c48ec69200f06f9 -INFO:root:PassingDataObject: nmdc:34c609c839345bb3b08a53c19681bf64 +INFO:root:PassingDataObject: nmdc:342fad07e0559d930a7946f9470b9108 INFO:root:PassingDataObject: nmdc:03bf9b7496d0e06b73981e24e77e846b +INFO:root:PassingDataObject: nmdc:34c609c839345bb3b08a53c19681bf64 +INFO:root:PassingDataObject: nmdc:9c313ddb8f3093a92880762319e44582 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208359 INFO:root:found 1 records INFO:root:record: nmdc:a7817ed507f90c680b7c8d87df25bfdc, Annotation Activity for nmdc:mga0hr43 -INFO:root:PassingDataObject: nmdc:8606261f590907838f0345f429a7a53b -INFO:root:PassingDataObject: nmdc:e95f91d997cbbcd44e6cbebb0a9fc853 +INFO:root:PassingDataObject: nmdc:fddb6df527d1a096f37039e173660665 +INFO:root:PassingDataObject: nmdc:7798ad5c634bac1a3f01428bbd1c5b8b +INFO:root:PassingDataObject: nmdc:ea37d67626bd92b763b7ea00079a4c1d +INFO:root:PassingDataObject: nmdc:edd899b2171711d90e603eeb16889628 INFO:root:PassingDataObject: nmdc:965ef3fb21b86abe71d31991dfbf5ced -INFO:root:PassingDataObject: nmdc:236ecb62f40a1f32207126a1629eddbf -INFO:root:PassingDataObject: nmdc:7fc1533396cbd5e645428e902aab4614 +INFO:root:PassingDataObject: nmdc:1745b759a591fc4909a116cd54aa663e +INFO:root:PassingDataObject: nmdc:f3ec0cfbfd92b874dc2f9da32b72f9d2 INFO:root:PassingDataObject: nmdc:9f59457e5f1ed59a8b3eaad21cb342ab INFO:root:PassingDataObject: nmdc:cd1cdf579ac39d793514e32ee3e86d58 -INFO:root:PassingDataObject: nmdc:763effe2106adf145bbf915a4200ace1 -INFO:root:PassingDataObject: nmdc:edd899b2171711d90e603eeb16889628 -INFO:root:PassingDataObject: nmdc:8ae4da60f687a049f20a69d0b876162c -INFO:root:PassingDataObject: nmdc:1c8406c20b143085eae49a7435ab72b0 -INFO:root:PassingDataObject: nmdc:7798ad5c634bac1a3f01428bbd1c5b8b -INFO:root:PassingDataObject: nmdc:f3ec0cfbfd92b874dc2f9da32b72f9d2 +INFO:root:PassingDataObject: nmdc:236ecb62f40a1f32207126a1629eddbf +INFO:root:PassingDataObject: nmdc:8606261f590907838f0345f429a7a53b INFO:root:PassingDataObject: nmdc:0f8c9a4f3f5a1c7e528736624a44a946 +INFO:root:PassingDataObject: nmdc:e95f91d997cbbcd44e6cbebb0a9fc853 +INFO:root:PassingDataObject: nmdc:1c8406c20b143085eae49a7435ab72b0 +INFO:root:PassingDataObject: nmdc:7fc1533396cbd5e645428e902aab4614 +INFO:root:PassingDataObject: nmdc:8ae4da60f687a049f20a69d0b876162c INFO:root:PassingDataObject: nmdc:0bf6cf367666a5acd860176140404f3e INFO:root:PassingDataObject: nmdc:bd7187e8df68407535b0ef74a1a9f73e -INFO:root:PassingDataObject: nmdc:fddb6df527d1a096f37039e173660665 -INFO:root:PassingDataObject: nmdc:1745b759a591fc4909a116cd54aa663e -INFO:root:PassingDataObject: nmdc:ea37d67626bd92b763b7ea00079a4c1d +INFO:root:PassingDataObject: nmdc:763effe2106adf145bbf915a4200ace1 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208359 @@ -2478,48 +2478,48 @@ INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138763 INFO:root:found 1 records INFO:root:record: nmdc:d2646debbfc0164979d65b81bf59d8c9, ReadBased Analysis Activity for nmdc:mga0np53 INFO:root:PassingDataObject: nmdc:dff52f085f09868fc1ad1ace14531279 -INFO:root:PassingDataObject: nmdc:db4d41216a837e140d5974241bfe4c8c INFO:root:PassingDataObject: nmdc:4b9d33d6db6043274c8b60d086078d2b -INFO:root:PassingDataObject: nmdc:498f456b63f8c718ec9ea353d655830d -INFO:root:PassingDataObject: nmdc:a20dae35d1650215bc907ba60821b935 INFO:root:PassingDataObject: nmdc:4551b05f4691e200074eba9c269957a1 INFO:root:PassingDataObject: nmdc:91df102105d5bfd59f299da88dfff9d3 +INFO:root:PassingDataObject: nmdc:a20dae35d1650215bc907ba60821b935 INFO:root:PassingDataObject: nmdc:67b8e2a863e637123646ee6a635ef783 +INFO:root:PassingDataObject: nmdc:498f456b63f8c718ec9ea353d655830d INFO:root:PassingDataObject: nmdc:ab5b836ecf40570430ee3feab915df37 +INFO:root:PassingDataObject: nmdc:db4d41216a837e140d5974241bfe4c8c INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138763 INFO:root:found 1 records INFO:root:record: nmdc:d2646debbfc0164979d65b81bf59d8c9, Assembly Activity for nmdc:mga0np53 -INFO:root:PassingDataObject: nmdc:c2f66045a0f7470391fc964ce3e67f48 INFO:root:PassingDataObject: nmdc:79879e11dee1f55621d2ec764bdd4585 +INFO:root:PassingDataObject: nmdc:43ec0c58f402d6f030f5815380870c17 INFO:root:PassingDataObject: nmdc:d60dc00d8089ccc9770a3cf19362fb7c +INFO:root:PassingDataObject: nmdc:c2f66045a0f7470391fc964ce3e67f48 INFO:root:PassingDataObject: nmdc:3774175616272168095e2ffe2833cdc9 -INFO:root:PassingDataObject: nmdc:43ec0c58f402d6f030f5815380870c17 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138763 INFO:root:found 1 records INFO:root:record: nmdc:d2646debbfc0164979d65b81bf59d8c9, Annotation Activity for nmdc:mga0np53 -INFO:root:PassingDataObject: nmdc:91ed50fbbcb7fa8d0f8b630b72ce8465 INFO:root:PassingDataObject: nmdc:7b1e2da3f6ca453d833038da79307eb5 -INFO:root:PassingDataObject: nmdc:9a8a6ff749049c965aee73a46fe71ee4 -INFO:root:PassingDataObject: nmdc:fabd259c4abbe2fa094b582ed270cfa0 INFO:root:PassingDataObject: nmdc:c606519ad3b5a72db1f674cd7663d9f6 -INFO:root:PassingDataObject: nmdc:46a8b9846f639d3a68765d4368ad8af8 +INFO:root:PassingDataObject: nmdc:d5f439e869f6affaa7052fafb39e5cd0 INFO:root:PassingDataObject: nmdc:605798a17b8df803f3855e3268377b2d +INFO:root:PassingDataObject: nmdc:703693765b1d09664b3dd893e5ea54e0 +INFO:root:PassingDataObject: nmdc:91ed50fbbcb7fa8d0f8b630b72ce8465 +INFO:root:PassingDataObject: nmdc:fabd259c4abbe2fa094b582ed270cfa0 +INFO:root:PassingDataObject: nmdc:0564bdc625d05147e42481afcd6fda50 +INFO:root:PassingDataObject: nmdc:9a8a6ff749049c965aee73a46fe71ee4 INFO:root:PassingDataObject: nmdc:4cfda769067d48907cf4dcc8fedb6ed5 -INFO:root:PassingDataObject: nmdc:6c491c73326ec24728a1555a8155be5f -INFO:root:PassingDataObject: nmdc:20a6818e80ab7cca402078bd14c29a93 -INFO:root:PassingDataObject: nmdc:a2422981564a58f56b4e7616313246f4 -INFO:root:PassingDataObject: nmdc:d2d46b8a89ed1d2cd56e82e0300d1ebf INFO:root:PassingDataObject: nmdc:8280cd33b61adcf4fd7b67cf94127167 -INFO:root:PassingDataObject: nmdc:0564bdc625d05147e42481afcd6fda50 -INFO:root:PassingDataObject: nmdc:ea1cc613a95eabd43826ef689847943c -INFO:root:PassingDataObject: nmdc:a1e77760fdd8a6f659829c9c53777989 -INFO:root:PassingDataObject: nmdc:703693765b1d09664b3dd893e5ea54e0 INFO:root:PassingDataObject: nmdc:ce34bb5413ca57928d16c0e383568532 -INFO:root:PassingDataObject: nmdc:d5f439e869f6affaa7052fafb39e5cd0 +INFO:root:PassingDataObject: nmdc:a1e77760fdd8a6f659829c9c53777989 +INFO:root:PassingDataObject: nmdc:46a8b9846f639d3a68765d4368ad8af8 +INFO:root:PassingDataObject: nmdc:6c491c73326ec24728a1555a8155be5f +INFO:root:PassingDataObject: nmdc:ea1cc613a95eabd43826ef689847943c +INFO:root:PassingDataObject: nmdc:d2d46b8a89ed1d2cd56e82e0300d1ebf +INFO:root:PassingDataObject: nmdc:a2422981564a58f56b4e7616313246f4 +INFO:root:PassingDataObject: nmdc:20a6818e80ab7cca402078bd14c29a93 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138763 @@ -2538,56 +2538,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:259a1435146041e INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, Read QC Activity for nmdc:mga0d014 -INFO:root:PassingDataObject: nmdc:5f3feb05dca2a847527c507d339a5053 INFO:root:PassingDataObject: nmdc:ac7f371fdf371a8ea7bc4da5a26aa248 +INFO:root:PassingDataObject: nmdc:5f3feb05dca2a847527c507d339a5053 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, ReadBased Analysis Activity for nmdc:mga0d014 -INFO:root:PassingDataObject: nmdc:efb94c49864f43e751a74fa5967b2007 -INFO:root:PassingDataObject: nmdc:25bba5aeb0e33c372fead03b587a2098 INFO:root:PassingDataObject: nmdc:d94983c3f334998b63c881da4063a5b4 -INFO:root:PassingDataObject: nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 -INFO:root:PassingDataObject: nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 -INFO:root:PassingDataObject: nmdc:b576e70a64c5094d84a12532c977d57b -INFO:root:PassingDataObject: nmdc:d60f7d7173f99100d51e6d3a7a6f7153 INFO:root:PassingDataObject: nmdc:82d8ed24c5b9abfc452aae9917021ccd +INFO:root:PassingDataObject: nmdc:25bba5aeb0e33c372fead03b587a2098 +INFO:root:PassingDataObject: nmdc:d60f7d7173f99100d51e6d3a7a6f7153 +INFO:root:PassingDataObject: nmdc:b576e70a64c5094d84a12532c977d57b +INFO:root:PassingDataObject: nmdc:efb94c49864f43e751a74fa5967b2007 INFO:root:PassingDataObject: nmdc:b60788f3b1d03f3990aac1e179f3b3a0 +INFO:root:PassingDataObject: nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 +INFO:root:PassingDataObject: nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, Assembly Activity for nmdc:mga0d014 -INFO:root:PassingDataObject: nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 -INFO:root:PassingDataObject: nmdc:f87ff508c3fdb000f68e7cc4be00fc9a INFO:root:PassingDataObject: nmdc:9b143c3b4d83f74c3a8e485ab854244c +INFO:root:PassingDataObject: nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 INFO:root:PassingDataObject: nmdc:678089696cb48800280025efbaa9d8e9 INFO:root:PassingDataObject: nmdc:e68f1da7de72154b54911586a6642016 +INFO:root:PassingDataObject: nmdc:f87ff508c3fdb000f68e7cc4be00fc9a INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, Annotation Activity for nmdc:mga0d014 -INFO:root:PassingDataObject: nmdc:3fafe39c4478c3ae2b93e735a44b17f2 -INFO:root:PassingDataObject: nmdc:efced8d016af8c48ac61c32f7e78915e -INFO:root:PassingDataObject: nmdc:5e0fdf2196c68418323094d641191073 -INFO:root:PassingDataObject: nmdc:aa6aa5a2bf410a99e493fe066b83328a -INFO:root:PassingDataObject: nmdc:15287e5581186143ea2e7eb9f54fd90c -INFO:root:PassingDataObject: nmdc:aded04739fb9066616911f2df4159b5f INFO:root:PassingDataObject: nmdc:2344d60363b974788b24fe132a2fae7e -INFO:root:PassingDataObject: nmdc:dc7b0af52c2f4456a0bb5a311b6f3ae6 -INFO:root:PassingDataObject: nmdc:e26d53e2a125318b1e273c028dcd8186 -INFO:root:PassingDataObject: nmdc:6e8e3b1d796aa23e61fb84a0ff7d7354 -INFO:root:PassingDataObject: nmdc:790fafe601bc3511c2831799423eacd9 -INFO:root:PassingDataObject: nmdc:44c4433585c8f8aac0483bfdb8c7d056 INFO:root:PassingDataObject: nmdc:47435e40368b01e9fdf8282a8f51807f +INFO:root:PassingDataObject: nmdc:44c4433585c8f8aac0483bfdb8c7d056 +INFO:root:PassingDataObject: nmdc:6e8e3b1d796aa23e61fb84a0ff7d7354 INFO:root:PassingDataObject: nmdc:518e3047196412db21cf4840eaedb184 +INFO:root:PassingDataObject: nmdc:c37245053fc901a44f1aea4a5799291b +INFO:root:PassingDataObject: nmdc:aded04739fb9066616911f2df4159b5f +INFO:root:PassingDataObject: nmdc:dc7b0af52c2f4456a0bb5a311b6f3ae6 INFO:root:PassingDataObject: nmdc:9f2d18caf87b87324c7adb0ba948bab6 +INFO:root:PassingDataObject: nmdc:15287e5581186143ea2e7eb9f54fd90c +INFO:root:PassingDataObject: nmdc:5e0fdf2196c68418323094d641191073 +INFO:root:PassingDataObject: nmdc:3fafe39c4478c3ae2b93e735a44b17f2 +INFO:root:PassingDataObject: nmdc:790fafe601bc3511c2831799423eacd9 +INFO:root:PassingDataObject: nmdc:efced8d016af8c48ac61c32f7e78915e +INFO:root:PassingDataObject: nmdc:aa6aa5a2bf410a99e493fe066b83328a +INFO:root:PassingDataObject: nmdc:90d637a1e30feb8b7ecc79ac80b5fc12 INFO:root:PassingDataObject: nmdc:e490e8559045b6ed7a3372e1b52fe15b INFO:root:PassingDataObject: nmdc:f377a3c2c5717aa9b7fba9970089d9cf -INFO:root:PassingDataObject: nmdc:90d637a1e30feb8b7ecc79ac80b5fc12 -INFO:root:PassingDataObject: nmdc:c37245053fc901a44f1aea4a5799291b +INFO:root:PassingDataObject: nmdc:e26d53e2a125318b1e273c028dcd8186 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138764 @@ -2606,63 +2606,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a1852a6601023d8 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, Read QC Activity for nmdc:mga0zh78 -INFO:root:PassingDataObject: nmdc:9563eed4d85815831dfcf8b8ea651ee4 INFO:root:PassingDataObject: nmdc:37cbca8544d40c5cff4d0fe368c40cc7 +INFO:root:PassingDataObject: nmdc:9563eed4d85815831dfcf8b8ea651ee4 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, ReadBased Analysis Activity for nmdc:mga0zh78 -INFO:root:PassingDataObject: nmdc:47d13caca51ed3fa89814f24305ea38d -INFO:root:PassingDataObject: nmdc:9caf84609b9ec4098a2d3467a1d9111b INFO:root:PassingDataObject: nmdc:279a423a9e0402eaafd7fb1ea4e30457 -INFO:root:PassingDataObject: nmdc:12247816b11fcb66edec5d823e6936eb -INFO:root:PassingDataObject: nmdc:fdd7dfb77cb680bb57d7bd3570c94854 +INFO:root:PassingDataObject: nmdc:47d13caca51ed3fa89814f24305ea38d INFO:root:PassingDataObject: nmdc:28593bff3c397004b8d010ff71e4f691 +INFO:root:PassingDataObject: nmdc:fdd7dfb77cb680bb57d7bd3570c94854 INFO:root:PassingDataObject: nmdc:736a8509c72de5b9fa0f913b8a1b87cb -INFO:root:PassingDataObject: nmdc:ce6833391d9bd0639e5476ecee4a14b3 +INFO:root:PassingDataObject: nmdc:12247816b11fcb66edec5d823e6936eb INFO:root:PassingDataObject: nmdc:a6dcaa2bab4c2fff6ba5b7b869896660 +INFO:root:PassingDataObject: nmdc:9caf84609b9ec4098a2d3467a1d9111b +INFO:root:PassingDataObject: nmdc:ce6833391d9bd0639e5476ecee4a14b3 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, Assembly Activity for nmdc:mga0zh78 -INFO:root:PassingDataObject: nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d INFO:root:PassingDataObject: nmdc:cd63d67a3005f9ef6b7a2c18e10ffe7f INFO:root:PassingDataObject: nmdc:a3f36588145928a2fd22d040d6895239 -INFO:root:PassingDataObject: nmdc:e8c101a054656ec574f23b925894f2dd INFO:root:PassingDataObject: nmdc:d125b2c61a4c6e264cc66e62e67b871a +INFO:root:PassingDataObject: nmdc:e8c101a054656ec574f23b925894f2dd +INFO:root:PassingDataObject: nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, Annotation Activity for nmdc:mga0zh78 -INFO:root:PassingDataObject: nmdc:423faa3868ecf8eb4edd51375bdf0d54 +INFO:root:PassingDataObject: nmdc:8e4245e02e6be363afc34c29383d923d +INFO:root:PassingDataObject: nmdc:b1a03f046e6f555a644cce546fc4d403 +INFO:root:PassingDataObject: nmdc:82acc4139642314dd1d94338493a8d93 INFO:root:PassingDataObject: nmdc:0bf7a6e197864b0f2e393e314265de21 INFO:root:PassingDataObject: nmdc:565de56481f14f1b1174865dabc18d3a +INFO:root:PassingDataObject: nmdc:3a2cc5081966f7aca921680841a4b454 +INFO:root:PassingDataObject: nmdc:3442f16a3fbb21c1ba26d660f45a21a6 +INFO:root:PassingDataObject: nmdc:3dc4bc6a0c680f9a3a4d81a85327e75d +INFO:root:PassingDataObject: nmdc:a639c50f2993046d9ba2b3cdf95dd6e2 INFO:root:PassingDataObject: nmdc:45be2650c52a729c7213a9cf77e0c821 -INFO:root:PassingDataObject: nmdc:9cd646b8690ef64cec9895f3336223ea -INFO:root:PassingDataObject: nmdc:b1a03f046e6f555a644cce546fc4d403 -INFO:root:PassingDataObject: nmdc:82acc4139642314dd1d94338493a8d93 INFO:root:PassingDataObject: nmdc:7c8227298ae301a045469bf48187f9f4 +INFO:root:PassingDataObject: nmdc:61dc922f1d9cc019a598e52e34ed472b +INFO:root:PassingDataObject: nmdc:423faa3868ecf8eb4edd51375bdf0d54 INFO:root:PassingDataObject: nmdc:df19e119f6bf7bba838283de0da24f33 +INFO:root:PassingDataObject: nmdc:4d6187dee8b1316a986d7bad699ea229 INFO:root:PassingDataObject: nmdc:6d71eaa29caec1fc79f1e58ff7b8b6fc -INFO:root:PassingDataObject: nmdc:8e4245e02e6be363afc34c29383d923d -INFO:root:PassingDataObject: nmdc:3442f16a3fbb21c1ba26d660f45a21a6 +INFO:root:PassingDataObject: nmdc:9cd646b8690ef64cec9895f3336223ea INFO:root:PassingDataObject: nmdc:f01097d0c891c8ad2773cb2eec1e9666 -INFO:root:PassingDataObject: nmdc:4d6187dee8b1316a986d7bad699ea229 INFO:root:PassingDataObject: nmdc:d73b4d7e79850e3abe2112426f077833 -INFO:root:PassingDataObject: nmdc:3a2cc5081966f7aca921680841a4b454 -INFO:root:PassingDataObject: nmdc:61dc922f1d9cc019a598e52e34ed472b -INFO:root:PassingDataObject: nmdc:a639c50f2993046d9ba2b3cdf95dd6e2 -INFO:root:PassingDataObject: nmdc:3dc4bc6a0c680f9a3a4d81a85327e75d INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, MAGs Analysis Activity for nmdc:mga0zh78 -INFO:root:PassingDataObject: nmdc:12a3c589d7fae4b7047f423bf90e980c INFO:root:PassingDataObject: nmdc:8e27bde3eb18e3d623cdd07d30880d82 +INFO:root:PassingDataObject: nmdc:12a3c589d7fae4b7047f423bf90e980c INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138761 @@ -2681,56 +2681,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, ReadBased Analysis Activity for nmdc:mga08r34 -INFO:root:PassingDataObject: nmdc:162476593f47b974abed8ce3045019c3 -INFO:root:PassingDataObject: nmdc:a2a68597495663a22ef71374ee86e8a8 -INFO:root:PassingDataObject: nmdc:29166ae0141ed8cd69d0c41167fa08f3 INFO:root:PassingDataObject: nmdc:4dd729aa563fb2435cf90d336c704feb -INFO:root:PassingDataObject: nmdc:3d0387c6fd51db156f588b6e5492456d -INFO:root:PassingDataObject: nmdc:8b34390db85bba4460ea4faa08f97c04 -INFO:root:PassingDataObject: nmdc:0ae3deb16284c899fb978d148f99109d INFO:root:PassingDataObject: nmdc:130829b30e6e2ed9ec9d701aeb3b88c0 +INFO:root:PassingDataObject: nmdc:a2a68597495663a22ef71374ee86e8a8 +INFO:root:PassingDataObject: nmdc:162476593f47b974abed8ce3045019c3 +INFO:root:PassingDataObject: nmdc:3d0387c6fd51db156f588b6e5492456d INFO:root:PassingDataObject: nmdc:822af29d1242f2c85ef9d4a8cab092e6 +INFO:root:PassingDataObject: nmdc:29166ae0141ed8cd69d0c41167fa08f3 +INFO:root:PassingDataObject: nmdc:0ae3deb16284c899fb978d148f99109d +INFO:root:PassingDataObject: nmdc:8b34390db85bba4460ea4faa08f97c04 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, Assembly Activity for nmdc:mga08r34 INFO:root:PassingDataObject: nmdc:48847c047bb1832a1bb60521492690f9 +INFO:root:PassingDataObject: nmdc:14a7236ef319a67e5107ad79a15b531c +INFO:root:PassingDataObject: nmdc:a031ef800d3944471d3d6782101ec0cb INFO:root:PassingDataObject: nmdc:24cc168e055aee129e3a86dab70805f3 INFO:root:PassingDataObject: nmdc:25278dea8043e4e93c34feeb80546796 -INFO:root:PassingDataObject: nmdc:a031ef800d3944471d3d6782101ec0cb -INFO:root:PassingDataObject: nmdc:14a7236ef319a67e5107ad79a15b531c INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, Annotation Activity for nmdc:mga08r34 -INFO:root:PassingDataObject: nmdc:ce3b04371573f4747010a3b23a3c96e0 INFO:root:PassingDataObject: nmdc:0ce0a9b2e6e7e88f3de0b403404e569b -INFO:root:PassingDataObject: nmdc:1d644e3c3f38881ce75904257a219534 -INFO:root:PassingDataObject: nmdc:9240d0b8b749c29b0376a4af210fd96b -INFO:root:PassingDataObject: nmdc:e929a722ade81c7cc93bb04a829dc417 -INFO:root:PassingDataObject: nmdc:f2ebe683189a9c1d4df8dcc331ea3a2b -INFO:root:PassingDataObject: nmdc:73850160619187e2f5b797e32792c1ee +INFO:root:PassingDataObject: nmdc:ce3b04371573f4747010a3b23a3c96e0 +INFO:root:PassingDataObject: nmdc:8171861174fb8eea65cd07e574b14e71 +INFO:root:PassingDataObject: nmdc:5c1d051cb0d03c2eafaf95a557e941b6 INFO:root:PassingDataObject: nmdc:ce969b1adcf927b03324918611885de4 INFO:root:PassingDataObject: nmdc:a5ed1d22eae00a06e7bb363dc236985c -INFO:root:PassingDataObject: nmdc:5c1d051cb0d03c2eafaf95a557e941b6 +INFO:root:PassingDataObject: nmdc:1d644e3c3f38881ce75904257a219534 INFO:root:PassingDataObject: nmdc:e2cbee63ce4344351a063782b6f1aba1 -INFO:root:PassingDataObject: nmdc:ffa9b61f73e5d2387759cf42b993e724 INFO:root:PassingDataObject: nmdc:b77d4b62746787139fd434dd8f04c3cd -INFO:root:PassingDataObject: nmdc:4879ca8ce28d92a24dd19d68e728fd83 -INFO:root:PassingDataObject: nmdc:893e7e3f90cb181fb93c63fb5b6a9dca +INFO:root:PassingDataObject: nmdc:f2ebe683189a9c1d4df8dcc331ea3a2b +INFO:root:PassingDataObject: nmdc:ffa9b61f73e5d2387759cf42b993e724 INFO:root:PassingDataObject: nmdc:3a35676071cdcc66d119f7faa4f188cf -INFO:root:PassingDataObject: nmdc:4713f756d85a42866d90391d381438ce +INFO:root:PassingDataObject: nmdc:893e7e3f90cb181fb93c63fb5b6a9dca +INFO:root:PassingDataObject: nmdc:e929a722ade81c7cc93bb04a829dc417 +INFO:root:PassingDataObject: nmdc:9240d0b8b749c29b0376a4af210fd96b +INFO:root:PassingDataObject: nmdc:73850160619187e2f5b797e32792c1ee INFO:root:PassingDataObject: nmdc:42e6ad9da595f5c750876af5d0bd3c67 -INFO:root:PassingDataObject: nmdc:8171861174fb8eea65cd07e574b14e71 +INFO:root:PassingDataObject: nmdc:4879ca8ce28d92a24dd19d68e728fd83 +INFO:root:PassingDataObject: nmdc:4713f756d85a42866d90391d381438ce INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, MAGs Analysis Activity for nmdc:mga08r34 -INFO:root:PassingDataObject: nmdc:d2365b55c692c309a9d158850f245d78 INFO:root:PassingDataObject: nmdc:daa2c84c1872846eec7edc5e4c34abd8 +INFO:root:PassingDataObject: nmdc:d2365b55c692c309a9d158850f245d78 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208360 @@ -2749,49 +2749,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208361 INFO:root:found 1 records INFO:root:record: nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396, ReadBased Analysis Activity for nmdc:mga07w21 -INFO:root:PassingDataObject: nmdc:0b94e706067160a6a32ace49bce7c551 -INFO:root:PassingDataObject: nmdc:c18dba161515a95f936c89a7a2419d06 -INFO:root:PassingDataObject: nmdc:b90c520abe9316e10946ec6d442f6479 -INFO:root:PassingDataObject: nmdc:6642f00c83ce9b397f76195517358af6 INFO:root:PassingDataObject: nmdc:6af06e84011c8e29f130430051c04dbd +INFO:root:PassingDataObject: nmdc:b90c520abe9316e10946ec6d442f6479 +INFO:root:PassingDataObject: nmdc:09e1ebdb7968df4fb2edad34247a0d96 +INFO:root:PassingDataObject: nmdc:5ea276228373b27ff6b0928436e677bd INFO:root:PassingDataObject: nmdc:bff2b6142843c3fd962381a3aa2f34cc INFO:root:PassingDataObject: nmdc:4462a5c000ae58c1629af4d70479fd1c -INFO:root:PassingDataObject: nmdc:5ea276228373b27ff6b0928436e677bd -INFO:root:PassingDataObject: nmdc:09e1ebdb7968df4fb2edad34247a0d96 +INFO:root:PassingDataObject: nmdc:6642f00c83ce9b397f76195517358af6 +INFO:root:PassingDataObject: nmdc:0b94e706067160a6a32ace49bce7c551 +INFO:root:PassingDataObject: nmdc:c18dba161515a95f936c89a7a2419d06 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208361 INFO:root:found 1 records INFO:root:record: nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396, Assembly Activity for nmdc:mga07w21 +INFO:root:PassingDataObject: nmdc:25c4ceed83baa63f12d5ac4af4fa152b INFO:root:PassingDataObject: nmdc:be4e193b9d5f0f997f8cf5981a471752 INFO:root:PassingDataObject: nmdc:953439df7c2113735ce1d946f63f9db4 -INFO:root:PassingDataObject: nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 -INFO:root:PassingDataObject: nmdc:25c4ceed83baa63f12d5ac4af4fa152b INFO:root:PassingDataObject: nmdc:c9af680311b49916ce2fa1644b0cb28c +INFO:root:PassingDataObject: nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208361 INFO:root:found 1 records INFO:root:record: nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396, Annotation Activity for nmdc:mga07w21 -INFO:root:PassingDataObject: nmdc:6fe4cb48bc3ba7d818abaa4890437b84 -INFO:root:PassingDataObject: nmdc:5a4af06ddce74f5d95de402b328c3d7a -INFO:root:PassingDataObject: nmdc:0be3bd08089cef21a8048c4ed0191721 -INFO:root:PassingDataObject: nmdc:a7c00552b874f63d4bf46c1d369f11e4 -INFO:root:PassingDataObject: nmdc:0ceda325248e7b5b165a341b65b5d875 INFO:root:PassingDataObject: nmdc:627cd5e02d70446a5faaef0a4caca152 -INFO:root:PassingDataObject: nmdc:64cce108c4c20ca95b585cb39f118b74 +INFO:root:PassingDataObject: nmdc:c281698d7f4aaffd3fc51d3be4923812 +INFO:root:PassingDataObject: nmdc:725610df714f53ca5915489992d92e1b INFO:root:PassingDataObject: nmdc:4d99d3339a308fd52141af0e25cd5562 -INFO:root:PassingDataObject: nmdc:cd640ef34e91897174d954f67def9d50 +INFO:root:PassingDataObject: nmdc:0be3bd08089cef21a8048c4ed0191721 +INFO:root:PassingDataObject: nmdc:51d329171a159c999805695d58b1d2a3 +INFO:root:PassingDataObject: nmdc:c1c680a9c8546c88ce64f56fc90f167d INFO:root:PassingDataObject: nmdc:2184b50d64aaa3aa723c1970b8c13d64 -INFO:root:PassingDataObject: nmdc:040a2e22ce18fee237af4c0c1e8d1f28 +INFO:root:PassingDataObject: nmdc:6fe4cb48bc3ba7d818abaa4890437b84 +INFO:root:PassingDataObject: nmdc:62b214ee34889ec9116e90bae0677e55 INFO:root:PassingDataObject: nmdc:d27122e06bcf95c35c9a8b75e9175d2f +INFO:root:PassingDataObject: nmdc:64cce108c4c20ca95b585cb39f118b74 +INFO:root:PassingDataObject: nmdc:cd640ef34e91897174d954f67def9d50 +INFO:root:PassingDataObject: nmdc:a7c00552b874f63d4bf46c1d369f11e4 INFO:root:PassingDataObject: nmdc:c337d55d954f3ad31a5faae217072b32 -INFO:root:PassingDataObject: nmdc:c1c680a9c8546c88ce64f56fc90f167d +INFO:root:PassingDataObject: nmdc:040a2e22ce18fee237af4c0c1e8d1f28 INFO:root:PassingDataObject: nmdc:fc8357f34fef1109d551a453437f3488 -INFO:root:PassingDataObject: nmdc:51d329171a159c999805695d58b1d2a3 -INFO:root:PassingDataObject: nmdc:c281698d7f4aaffd3fc51d3be4923812 -INFO:root:PassingDataObject: nmdc:725610df714f53ca5915489992d92e1b -INFO:root:PassingDataObject: nmdc:62b214ee34889ec9116e90bae0677e55 +INFO:root:PassingDataObject: nmdc:0ceda325248e7b5b165a341b65b5d875 +INFO:root:PassingDataObject: nmdc:5a4af06ddce74f5d95de402b328c3d7a INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208361 @@ -2817,56 +2817,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, ReadBased Analysis Activity for nmdc:mga0tz31 +INFO:root:PassingDataObject: nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d +INFO:root:PassingDataObject: nmdc:c67be157191bc733090db7c6e0ca0f89 INFO:root:PassingDataObject: nmdc:f479aa0eca808c031de0d80b3a10a1a8 -INFO:root:PassingDataObject: nmdc:a3244f8601e6d77b419152d05d7e836e -INFO:root:PassingDataObject: nmdc:f27feac509e24df07ff22bf21e03d49a -INFO:root:PassingDataObject: nmdc:4ae8ca0ec9a1c84205038b854205e587 INFO:root:PassingDataObject: nmdc:01c99ba64519b8bd3c050b3d16706111 -INFO:root:PassingDataObject: nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d +INFO:root:PassingDataObject: nmdc:4ae8ca0ec9a1c84205038b854205e587 INFO:root:PassingDataObject: nmdc:82ea4c0739c7289dea24e6074e7fcd1c +INFO:root:PassingDataObject: nmdc:a3244f8601e6d77b419152d05d7e836e INFO:root:PassingDataObject: nmdc:437020ba232579f82ea03b1c018456ca -INFO:root:PassingDataObject: nmdc:c67be157191bc733090db7c6e0ca0f89 +INFO:root:PassingDataObject: nmdc:f27feac509e24df07ff22bf21e03d49a INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, Assembly Activity for nmdc:mga0tz31 INFO:root:PassingDataObject: nmdc:53b133bcf15c8e42144ea221b0f0a887 -INFO:root:PassingDataObject: nmdc:f863a250082e61048c2c78d8900ee674 +INFO:root:PassingDataObject: nmdc:eeca0423df4faff401577c56437cb9f1 INFO:root:PassingDataObject: nmdc:84ed09ab11f6b16c4232d963b399047a INFO:root:PassingDataObject: nmdc:77d566d4876f42705d7d97da57b9e26a -INFO:root:PassingDataObject: nmdc:eeca0423df4faff401577c56437cb9f1 +INFO:root:PassingDataObject: nmdc:f863a250082e61048c2c78d8900ee674 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, Annotation Activity for nmdc:mga0tz31 -INFO:root:PassingDataObject: nmdc:c2e5e12c4641e0c2cbebf188ceb39250 -INFO:root:PassingDataObject: nmdc:404195f25f1ba59cf88e3d674f5a805e -INFO:root:PassingDataObject: nmdc:e8a842bedab62a0d28c5b0fdb0ee677c -INFO:root:PassingDataObject: nmdc:81241d09ad946db904ea962b229ee404 -INFO:root:PassingDataObject: nmdc:61f16354eb0f55115366a9854ab180c3 -INFO:root:PassingDataObject: nmdc:36220be5804bdc9b878c06bfe6c47445 INFO:root:PassingDataObject: nmdc:157ae3ae59df3701a22e322c30d9d822 -INFO:root:PassingDataObject: nmdc:510150c4e24cd45ad68c4380dc1bae74 -INFO:root:PassingDataObject: nmdc:0ab1b9a9d03bc36e3a3ff478b4cdb0f1 -INFO:root:PassingDataObject: nmdc:5b00c22e4293a65ce4e59277d4973df2 +INFO:root:PassingDataObject: nmdc:c2e5e12c4641e0c2cbebf188ceb39250 +INFO:root:PassingDataObject: nmdc:eb741738c6271b23b7631aaee5be06b9 INFO:root:PassingDataObject: nmdc:b062d687097a544a0734831f5988a11e -INFO:root:PassingDataObject: nmdc:681aff4296793736dee7aa39d9f4408c +INFO:root:PassingDataObject: nmdc:f8e951ad72ce24d28675e28da04f0257 +INFO:root:PassingDataObject: nmdc:0ab1b9a9d03bc36e3a3ff478b4cdb0f1 +INFO:root:PassingDataObject: nmdc:e8a842bedab62a0d28c5b0fdb0ee677c +INFO:root:PassingDataObject: nmdc:6823ff84f58b21dd9b1020f638ec0a98 INFO:root:PassingDataObject: nmdc:60c2dbbc7cdf7c6f7921ec33bc44ab70 -INFO:root:PassingDataObject: nmdc:837e427c7caea5a0972394fbc4fcad3a INFO:root:PassingDataObject: nmdc:06ff1cdf17484fe75be78a1845b92cce -INFO:root:PassingDataObject: nmdc:eb741738c6271b23b7631aaee5be06b9 -INFO:root:PassingDataObject: nmdc:f8e951ad72ce24d28675e28da04f0257 +INFO:root:PassingDataObject: nmdc:681aff4296793736dee7aa39d9f4408c INFO:root:PassingDataObject: nmdc:2a2b17ed73e024b71be9a4a51907ccc0 -INFO:root:PassingDataObject: nmdc:6823ff84f58b21dd9b1020f638ec0a98 +INFO:root:PassingDataObject: nmdc:510150c4e24cd45ad68c4380dc1bae74 +INFO:root:PassingDataObject: nmdc:61f16354eb0f55115366a9854ab180c3 +INFO:root:PassingDataObject: nmdc:5b00c22e4293a65ce4e59277d4973df2 +INFO:root:PassingDataObject: nmdc:837e427c7caea5a0972394fbc4fcad3a +INFO:root:PassingDataObject: nmdc:81241d09ad946db904ea962b229ee404 +INFO:root:PassingDataObject: nmdc:404195f25f1ba59cf88e3d674f5a805e +INFO:root:PassingDataObject: nmdc:36220be5804bdc9b878c06bfe6c47445 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, MAGs Analysis Activity for nmdc:mga0tz31 -INFO:root:PassingDataObject: nmdc:4510817d3c2f796372968caed37ccfe9 INFO:root:PassingDataObject: nmdc:7b6370ecbdd0ff86fa49da15c302b054 +INFO:root:PassingDataObject: nmdc:4510817d3c2f796372968caed37ccfe9 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208363 @@ -2878,56 +2878,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:426202d9528d4af INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, Read QC Activity for nmdc:mga0ws51 -INFO:root:PassingDataObject: nmdc:db283cbf272ab654da9d4b6a450cc24f INFO:root:PassingDataObject: nmdc:80e5b2e3a281d2fd69ca6b9ac99114be +INFO:root:PassingDataObject: nmdc:db283cbf272ab654da9d4b6a450cc24f INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, ReadBased Analysis Activity for nmdc:mga0ws51 -INFO:root:PassingDataObject: nmdc:940fbc40a8aee0384534b966348b39ea -INFO:root:PassingDataObject: nmdc:ab2e59e3e053a742e13724228318b735 -INFO:root:PassingDataObject: nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 INFO:root:PassingDataObject: nmdc:b76d37c44c22589af96491cb4ef021d8 +INFO:root:PassingDataObject: nmdc:c1cd2425ac0e185206fda36d3ddd2f2a INFO:root:PassingDataObject: nmdc:0946444733dadcf9dcbe7b234f53bf6b +INFO:root:PassingDataObject: nmdc:940fbc40a8aee0384534b966348b39ea +INFO:root:PassingDataObject: nmdc:ab2e59e3e053a742e13724228318b735 INFO:root:PassingDataObject: nmdc:e40ea1e272be59efcf7007c46382d25e INFO:root:PassingDataObject: nmdc:75927a7b9e0d5d95b95adfd04ff185dd +INFO:root:PassingDataObject: nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 INFO:root:PassingDataObject: nmdc:1e66471eceb4c3421297919501d04899 -INFO:root:PassingDataObject: nmdc:c1cd2425ac0e185206fda36d3ddd2f2a INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, Assembly Activity for nmdc:mga0ws51 +INFO:root:PassingDataObject: nmdc:f23b9a9213b3710c256607ff37e46b45 INFO:root:PassingDataObject: nmdc:750738895197b7af52d0b664b3d72833 INFO:root:PassingDataObject: nmdc:913a139c902a41261c89f8385317684a -INFO:root:PassingDataObject: nmdc:f23b9a9213b3710c256607ff37e46b45 -INFO:root:PassingDataObject: nmdc:3cea51b509fbdb0b47b1351aa7902556 INFO:root:PassingDataObject: nmdc:155dd13959c24094b25c32226d09a290 +INFO:root:PassingDataObject: nmdc:3cea51b509fbdb0b47b1351aa7902556 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, Annotation Activity for nmdc:mga0ws51 INFO:root:PassingDataObject: nmdc:ae1bb26bcad16fceca0ffd107cbfa274 -INFO:root:PassingDataObject: nmdc:f69281492ea873c55b34733b5f1f89f8 +INFO:root:PassingDataObject: nmdc:d1c036cf7a1832254cea138a44c7b0dd +INFO:root:PassingDataObject: nmdc:2bdcb077ef399bb2cdf018afc810a3d4 +INFO:root:PassingDataObject: nmdc:8562175ff3fe822a660e1553addb5ea2 INFO:root:PassingDataObject: nmdc:259f344507eff68d41d2e72715e6f86d -INFO:root:PassingDataObject: nmdc:e78a34a7e033caccf3d8202d58511740 -INFO:root:PassingDataObject: nmdc:02bad9c138d32082fa26c925914f343c +INFO:root:PassingDataObject: nmdc:1d61a33109b96eab0e9618230d801c30 +INFO:root:PassingDataObject: nmdc:5741de0f98a09e9cdb181526b0ff9c5a +INFO:root:PassingDataObject: nmdc:f69281492ea873c55b34733b5f1f89f8 INFO:root:PassingDataObject: nmdc:a26b72c1013a2a297908b1b57e1b1d19 INFO:root:PassingDataObject: nmdc:fc882cfc3a2645aafa8c333b70cf5d37 +INFO:root:PassingDataObject: nmdc:02bad9c138d32082fa26c925914f343c INFO:root:PassingDataObject: nmdc:1c0c92e821c7e88043061a6b3cb25f0d -INFO:root:PassingDataObject: nmdc:35a4d74618a1491d50b0780682b6e582 -INFO:root:PassingDataObject: nmdc:0e736b347bedd9b1d7c75e31f294743d -INFO:root:PassingDataObject: nmdc:d1c036cf7a1832254cea138a44c7b0dd -INFO:root:PassingDataObject: nmdc:b87cd6ba4964c4530d9f78fd2d8e98e0 -INFO:root:PassingDataObject: nmdc:2bdcb077ef399bb2cdf018afc810a3d4 -INFO:root:PassingDataObject: nmdc:5741de0f98a09e9cdb181526b0ff9c5a -INFO:root:PassingDataObject: nmdc:1d61a33109b96eab0e9618230d801c30 +INFO:root:PassingDataObject: nmdc:58a473b4aed16a1f409a69e2ef55ec7a INFO:root:PassingDataObject: nmdc:4fa1011d7da4a25e59df367242324b25 -INFO:root:PassingDataObject: nmdc:8562175ff3fe822a660e1553addb5ea2 +INFO:root:PassingDataObject: nmdc:e78a34a7e033caccf3d8202d58511740 +INFO:root:PassingDataObject: nmdc:0e736b347bedd9b1d7c75e31f294743d INFO:root:PassingDataObject: nmdc:a8511779d0cdd4325e4ca0b031a1d512 -INFO:root:PassingDataObject: nmdc:58a473b4aed16a1f409a69e2ef55ec7a +INFO:root:PassingDataObject: nmdc:35a4d74618a1491d50b0780682b6e582 +INFO:root:PassingDataObject: nmdc:b87cd6ba4964c4530d9f78fd2d8e98e0 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208362 @@ -2953,56 +2953,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, ReadBased Analysis Activity for nmdc:mga0zn66 -INFO:root:PassingDataObject: nmdc:d5aa266e817720ff47d7aa850c818715 -INFO:root:PassingDataObject: nmdc:a2014e8a59067392e7354a0f01fafd6d -INFO:root:PassingDataObject: nmdc:ac6d3b9fa77d411df771712fa82fdd9a -INFO:root:PassingDataObject: nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed INFO:root:PassingDataObject: nmdc:51e9e7947025802ac2ef249e475c640f -INFO:root:PassingDataObject: nmdc:26af6a9cfbc59c380be916b7dd9ec66c +INFO:root:PassingDataObject: nmdc:391138258e22a253a52fe8beb1e53eca +INFO:root:PassingDataObject: nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed +INFO:root:PassingDataObject: nmdc:d5aa266e817720ff47d7aa850c818715 INFO:root:PassingDataObject: nmdc:b1a8f51847736cf459e75e2414a0066d +INFO:root:PassingDataObject: nmdc:ac6d3b9fa77d411df771712fa82fdd9a INFO:root:PassingDataObject: nmdc:4f15ff004d666aec8af98763c326c38a -INFO:root:PassingDataObject: nmdc:391138258e22a253a52fe8beb1e53eca +INFO:root:PassingDataObject: nmdc:a2014e8a59067392e7354a0f01fafd6d +INFO:root:PassingDataObject: nmdc:26af6a9cfbc59c380be916b7dd9ec66c INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, Assembly Activity for nmdc:mga0zn66 -INFO:root:PassingDataObject: nmdc:d39cd00c78689bfe7a71d5ab1d85a488 -INFO:root:PassingDataObject: nmdc:1ba2fa1136c55203072ea2538980ddd6 INFO:root:PassingDataObject: nmdc:0e34c2e87918fb623b2a7661cf36bfa7 +INFO:root:PassingDataObject: nmdc:1ba2fa1136c55203072ea2538980ddd6 INFO:root:PassingDataObject: nmdc:a21eb2b65627b5942c35010f6ff62ba6 INFO:root:PassingDataObject: nmdc:d3a4775e54eb99509f2d35314cf68705 +INFO:root:PassingDataObject: nmdc:d39cd00c78689bfe7a71d5ab1d85a488 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, Annotation Activity for nmdc:mga0zn66 -INFO:root:PassingDataObject: nmdc:49f7db7161074f62415b895cc740083c -INFO:root:PassingDataObject: nmdc:c4a6941e5ad3c0218b7ffda43024a26f -INFO:root:PassingDataObject: nmdc:b18748254f460e87e4b6f953fe1c8f31 -INFO:root:PassingDataObject: nmdc:98c30371436387268b2d06adf3f93170 -INFO:root:PassingDataObject: nmdc:7376b9af926e77173241cd007290c054 +INFO:root:PassingDataObject: nmdc:cc1463e31531747a29e0ce44d928e4b5 INFO:root:PassingDataObject: nmdc:1844499c177476b57dec78d07390d716 -INFO:root:PassingDataObject: nmdc:1dd2da17bc18b1736c76ef19c1cdef55 -INFO:root:PassingDataObject: nmdc:d1d1f6aded15e865f7ed9d424afb1dbd -INFO:root:PassingDataObject: nmdc:5717d58eeb90aa04fd33c008f822cbe5 -INFO:root:PassingDataObject: nmdc:c70672108eb548674fe99ed03b0057ec -INFO:root:PassingDataObject: nmdc:aeea17ad17907e8c0d63beeccaaf2496 +INFO:root:PassingDataObject: nmdc:7376b9af926e77173241cd007290c054 INFO:root:PassingDataObject: nmdc:c9486edaa66ec65affe47b007079bddd -INFO:root:PassingDataObject: nmdc:f45e71e984af279a044e8dca39560f56 -INFO:root:PassingDataObject: nmdc:420aa59100482ab4c4d8531c2c3ae72e +INFO:root:PassingDataObject: nmdc:d1d1f6aded15e865f7ed9d424afb1dbd INFO:root:PassingDataObject: nmdc:a3d50f597843c1037e696a9ca54de2c0 +INFO:root:PassingDataObject: nmdc:49f7db7161074f62415b895cc740083c +INFO:root:PassingDataObject: nmdc:f45e71e984af279a044e8dca39560f56 +INFO:root:PassingDataObject: nmdc:98c30371436387268b2d06adf3f93170 INFO:root:PassingDataObject: nmdc:bac45a5564b34cbd32b4cd5d1d66bffc -INFO:root:PassingDataObject: nmdc:cc1463e31531747a29e0ce44d928e4b5 +INFO:root:PassingDataObject: nmdc:aeea17ad17907e8c0d63beeccaaf2496 +INFO:root:PassingDataObject: nmdc:b18748254f460e87e4b6f953fe1c8f31 +INFO:root:PassingDataObject: nmdc:5717d58eeb90aa04fd33c008f822cbe5 +INFO:root:PassingDataObject: nmdc:1dd2da17bc18b1736c76ef19c1cdef55 INFO:root:PassingDataObject: nmdc:3150e0ea836a76269d5e3870b18527af +INFO:root:PassingDataObject: nmdc:c70672108eb548674fe99ed03b0057ec +INFO:root:PassingDataObject: nmdc:c4a6941e5ad3c0218b7ffda43024a26f +INFO:root:PassingDataObject: nmdc:420aa59100482ab4c4d8531c2c3ae72e INFO:root:PassingDataObject: nmdc:fd9fc0c1b60f7d9f8818bd014f565b88 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, MAGs Analysis Activity for nmdc:mga0zn66 -INFO:root:PassingDataObject: nmdc:6cd292fcddd3e4d839d5f39ee189bbbd INFO:root:PassingDataObject: nmdc:4d672c6cc424c86ecc1a65c844908479 +INFO:root:PassingDataObject: nmdc:6cd292fcddd3e4d839d5f39ee189bbbd INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208364 @@ -3014,63 +3014,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:104c9da6da3a685 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, Read QC Activity for nmdc:mga0qr49 -INFO:root:PassingDataObject: nmdc:37a9c8f31c8240c7a72233e33724dc18 INFO:root:PassingDataObject: nmdc:93c11e5c022730d2f3ba2b237abe5eac +INFO:root:PassingDataObject: nmdc:37a9c8f31c8240c7a72233e33724dc18 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, ReadBased Analysis Activity for nmdc:mga0qr49 -INFO:root:PassingDataObject: nmdc:bd89f6fb8c30f35040400d527117f7c1 -INFO:root:PassingDataObject: nmdc:1584c99826b72d31e550a09dc839ce89 -INFO:root:PassingDataObject: nmdc:66a58407634a85b137a22d9b245db41a -INFO:root:PassingDataObject: nmdc:9c3f084c4224500fb67a6fe44053e0cd INFO:root:PassingDataObject: nmdc:20d68f36daa6167687d12cd0558598ce +INFO:root:PassingDataObject: nmdc:66a58407634a85b137a22d9b245db41a INFO:root:PassingDataObject: nmdc:4994d80507dc9b4b366debef805d2227 INFO:root:PassingDataObject: nmdc:f3816b59147b769cddc7c1d514011294 +INFO:root:PassingDataObject: nmdc:bd89f6fb8c30f35040400d527117f7c1 INFO:root:PassingDataObject: nmdc:e76e3bfb17589a0396f0071b6488226a +INFO:root:PassingDataObject: nmdc:9c3f084c4224500fb67a6fe44053e0cd INFO:root:PassingDataObject: nmdc:986051bcc64e9d19435bc2c56ccdfb98 +INFO:root:PassingDataObject: nmdc:1584c99826b72d31e550a09dc839ce89 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, Assembly Activity for nmdc:mga0qr49 -INFO:root:PassingDataObject: nmdc:6316e96b726e8d5e4782ea3c654ef37d -INFO:root:PassingDataObject: nmdc:3d1f4d18d08b33b08f872807f17d8ec8 +INFO:root:PassingDataObject: nmdc:fdaf545aa50d1180aaee1ea6b325dce3 INFO:root:PassingDataObject: nmdc:cad82a7e34092c6206773536c52107f5 INFO:root:PassingDataObject: nmdc:a9d4f0be1f4e5b57e5b59592b496e5ee -INFO:root:PassingDataObject: nmdc:fdaf545aa50d1180aaee1ea6b325dce3 +INFO:root:PassingDataObject: nmdc:6316e96b726e8d5e4782ea3c654ef37d +INFO:root:PassingDataObject: nmdc:3d1f4d18d08b33b08f872807f17d8ec8 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, Annotation Activity for nmdc:mga0qr49 -INFO:root:PassingDataObject: nmdc:080330f7b340c768d19783007028ccc3 -INFO:root:PassingDataObject: nmdc:dd47395c6f58c3155772cb9b141c6af2 +INFO:root:PassingDataObject: nmdc:a7a27af2f5b957456de3adc378d78c7a +INFO:root:PassingDataObject: nmdc:59653809073c8990d37d5519598a077f +INFO:root:PassingDataObject: nmdc:b647b35aac8f0abd027187b2f9aa73a9 INFO:root:PassingDataObject: nmdc:643e1e16b3b35c80e8a4747be997061c -INFO:root:PassingDataObject: nmdc:c63945b1d298e081b19bb385f1a2761c +INFO:root:PassingDataObject: nmdc:c46f3757256bc3fe8dd75d20931b66b9 INFO:root:PassingDataObject: nmdc:7966147a95d3a199fb922ee04c965e15 +INFO:root:PassingDataObject: nmdc:080330f7b340c768d19783007028ccc3 INFO:root:PassingDataObject: nmdc:dcfa21ca4e243ffaade6ab23480541d7 -INFO:root:PassingDataObject: nmdc:59653809073c8990d37d5519598a077f -INFO:root:PassingDataObject: nmdc:8933fa55df88717ea083acf4d921bca1 -INFO:root:PassingDataObject: nmdc:ed0d3a5866bb29a7851c3575299d7db6 -INFO:root:PassingDataObject: nmdc:75d91f30a28972f7560febfdfd3dcee7 -INFO:root:PassingDataObject: nmdc:b647b35aac8f0abd027187b2f9aa73a9 +INFO:root:PassingDataObject: nmdc:b0666d531e2c9a6950060456cd52415a +INFO:root:PassingDataObject: nmdc:b50a37d8d60decf5df39d73a847d529c +INFO:root:PassingDataObject: nmdc:c38c17414c5617274b1b1b1dd68fb940 INFO:root:PassingDataObject: nmdc:a285653b827d1932dbfaca7052020c69 +INFO:root:PassingDataObject: nmdc:75d91f30a28972f7560febfdfd3dcee7 INFO:root:PassingDataObject: nmdc:85db960d516446b365ba5dd189888eb7 -INFO:root:PassingDataObject: nmdc:c38c17414c5617274b1b1b1dd68fb940 -INFO:root:PassingDataObject: nmdc:b50a37d8d60decf5df39d73a847d529c +INFO:root:PassingDataObject: nmdc:c63945b1d298e081b19bb385f1a2761c +INFO:root:PassingDataObject: nmdc:8933fa55df88717ea083acf4d921bca1 +INFO:root:PassingDataObject: nmdc:ed0d3a5866bb29a7851c3575299d7db6 +INFO:root:PassingDataObject: nmdc:dd47395c6f58c3155772cb9b141c6af2 INFO:root:PassingDataObject: nmdc:061df7d982f8c98954dc7872266ca16e -INFO:root:PassingDataObject: nmdc:c46f3757256bc3fe8dd75d20931b66b9 -INFO:root:PassingDataObject: nmdc:a7a27af2f5b957456de3adc378d78c7a -INFO:root:PassingDataObject: nmdc:b0666d531e2c9a6950060456cd52415a INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, MAGs Analysis Activity for nmdc:mga0qr49 -INFO:root:PassingDataObject: nmdc:93411604712642444f269dbf88e5fa81 INFO:root:PassingDataObject: nmdc:79186f85b0a92fb61c59de519112bc92 +INFO:root:PassingDataObject: nmdc:93411604712642444f269dbf88e5fa81 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208365 @@ -3089,48 +3089,48 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208366 INFO:root:found 1 records INFO:root:record: nmdc:d305fa6e01ef8d3dd28a0e79cd30709c, ReadBased Analysis Activity for nmdc:mga01778 +INFO:root:PassingDataObject: nmdc:4454244aa8d4e5c886cb839780defef2 +INFO:root:PassingDataObject: nmdc:fd24a4640ef629e255fe4af0353e68fd INFO:root:PassingDataObject: nmdc:a391da88c8bcd5eeeeabbe417ae83572 +INFO:root:PassingDataObject: nmdc:986a43b1309ea630dcef137d7d41a8de +INFO:root:PassingDataObject: nmdc:754cc6e6046f9ee4ac2324974bdffa1c INFO:root:PassingDataObject: nmdc:455254de6b416946e7433a1fe2c00932 -INFO:root:PassingDataObject: nmdc:d9147a83cc015cf896a7c1684dcb9bf8 INFO:root:PassingDataObject: nmdc:ee2d6a7c74af6e4c124c606400bd8306 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nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 INFO:root:PassingDataObject: nmdc:d5c6a425fbebdc920fd61001ea4aab22 +INFO:root:PassingDataObject: nmdc:e344991a805201b76bfa8afc634c8e59 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208366 INFO:root:found 1 records INFO:root:record: nmdc:d305fa6e01ef8d3dd28a0e79cd30709c, Annotation Activity for nmdc:mga01778 -INFO:root:PassingDataObject: nmdc:9bd7cf5dc1ccd930c326de6cafca0cc4 -INFO:root:PassingDataObject: nmdc:bdf29a655d7835cedbde70ba9307e83d +INFO:root:PassingDataObject: nmdc:4734b2f10b6dd965d1a5393f741afca9 INFO:root:PassingDataObject: nmdc:25dfe94c34021e019b45bfb6d5344fac -INFO:root:PassingDataObject: nmdc:c898060c7c6f6cf700b6ccbbe740b754 +INFO:root:PassingDataObject: nmdc:9bd7cf5dc1ccd930c326de6cafca0cc4 +INFO:root:PassingDataObject: nmdc:44087875a41b218b98892832252db32a +INFO:root:PassingDataObject: nmdc:5f2192b681a21dde6066ffc7ad42612a INFO:root:PassingDataObject: nmdc:3ed4ca98b59c55ceaf4ccbc4be342ad5 -INFO:root:PassingDataObject: nmdc:d68e471a7f4937df52ce8ce86f672777 -INFO:root:PassingDataObject: nmdc:a7c7d93a3012b0b0c9890131d15167e7 -INFO:root:PassingDataObject: nmdc:aca4996d6039c77d55b86d25a37a3b59 -INFO:root:PassingDataObject: nmdc:5045788bac3176b1b4935349929234eb INFO:root:PassingDataObject: nmdc:31becd0dfdecc41a4a25d61686eef3d3 -INFO:root:PassingDataObject: nmdc:30d5b08e2a27a77108ffc1d574f6a92d -INFO:root:PassingDataObject: nmdc:5f2192b681a21dde6066ffc7ad42612a -INFO:root:PassingDataObject: nmdc:4734b2f10b6dd965d1a5393f741afca9 -INFO:root:PassingDataObject: nmdc:dfe587cd4dfed121df26b507442218ec INFO:root:PassingDataObject: nmdc:bfa01dabda89d421cf8c540c9c03d172 -INFO:root:PassingDataObject: nmdc:831ccce453dff591ea759ca7b400823d +INFO:root:PassingDataObject: nmdc:bdf29a655d7835cedbde70ba9307e83d INFO:root:PassingDataObject: nmdc:89fef1e7e9aa68290c0bd45a3b461b32 -INFO:root:PassingDataObject: nmdc:44087875a41b218b98892832252db32a +INFO:root:PassingDataObject: nmdc:831ccce453dff591ea759ca7b400823d +INFO:root:PassingDataObject: nmdc:aca4996d6039c77d55b86d25a37a3b59 +INFO:root:PassingDataObject: nmdc:30d5b08e2a27a77108ffc1d574f6a92d +INFO:root:PassingDataObject: nmdc:dfe587cd4dfed121df26b507442218ec +INFO:root:PassingDataObject: nmdc:5045788bac3176b1b4935349929234eb +INFO:root:PassingDataObject: nmdc:c898060c7c6f6cf700b6ccbbe740b754 +INFO:root:PassingDataObject: nmdc:a7c7d93a3012b0b0c9890131d15167e7 +INFO:root:PassingDataObject: nmdc:d68e471a7f4937df52ce8ce86f672777 INFO:root:PassingDataObject: nmdc:8552983127314ac67f0590afae339694 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 @@ -3150,55 +3150,55 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8656757191fe5a8 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, Read QC Activity for nmdc:mga0gs39 -INFO:root:PassingDataObject: nmdc:b5cd85e058b666afe786f94296b3bb87 INFO:root:PassingDataObject: nmdc:1a5517ea860e0f63d1bb09fa7a26896c +INFO:root:PassingDataObject: nmdc:b5cd85e058b666afe786f94296b3bb87 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, ReadBased Analysis Activity for nmdc:mga0gs39 -INFO:root:PassingDataObject: nmdc:31eecb6142eb5975e9f7302e9716c750 -INFO:root:PassingDataObject: nmdc:d153a1e250bf419cf54bbe9c0be1fff6 -INFO:root:PassingDataObject: nmdc:bc2050ad81b78baaf626aeca22d55ccf -INFO:root:PassingDataObject: nmdc:42c66b9d55f81a9ccb6a49209bca21b4 -INFO:root:PassingDataObject: nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 INFO:root:PassingDataObject: nmdc:e637ad8e302e53d4191c27a26e6b24f3 INFO:root:PassingDataObject: nmdc:01a13a8c760eed71143cfb44f4897c1b -INFO:root:PassingDataObject: nmdc:bcffa09dd745360a48fa17257f9859fa +INFO:root:PassingDataObject: nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 +INFO:root:PassingDataObject: nmdc:31eecb6142eb5975e9f7302e9716c750 +INFO:root:PassingDataObject: nmdc:42c66b9d55f81a9ccb6a49209bca21b4 INFO:root:PassingDataObject: nmdc:1649191c4fa6b979559061a3f7ac3da7 +INFO:root:PassingDataObject: nmdc:bc2050ad81b78baaf626aeca22d55ccf +INFO:root:PassingDataObject: nmdc:d153a1e250bf419cf54bbe9c0be1fff6 +INFO:root:PassingDataObject: nmdc:bcffa09dd745360a48fa17257f9859fa INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, Assembly Activity for nmdc:mga0gs39 -INFO:root:PassingDataObject: nmdc:d4a4ff4f1d5cfda922057876ea6a0a00 +INFO:root:PassingDataObject: nmdc:979a9e14085b248d091116ebf844d431 INFO:root:PassingDataObject: nmdc:3bf1a3c10d2c70f0b2e80318d69e31b6 INFO:root:PassingDataObject: nmdc:fa10ae73ca177f92ae50c5311ee16e09 -INFO:root:PassingDataObject: nmdc:979a9e14085b248d091116ebf844d431 +INFO:root:PassingDataObject: nmdc:d4a4ff4f1d5cfda922057876ea6a0a00 INFO:root:PassingDataObject: nmdc:1667f3a9d5ad4f2a008aa1a8220834b0 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, Annotation Activity for nmdc:mga0gs39 -INFO:root:PassingDataObject: nmdc:663f67b0d49b8bd89ae51fc905f27106 -INFO:root:PassingDataObject: nmdc:466994ddeeacbe52c5de52006cf16f23 -INFO:root:PassingDataObject: nmdc:9ea7bd0a9922f2ac47cb8026f4674db4 +INFO:root:PassingDataObject: nmdc:c80b9a6d4e5da0a0baf50e3dd082cd1d INFO:root:PassingDataObject: nmdc:acace1f7368cd0be3681dd6ae0ff7114 -INFO:root:PassingDataObject: nmdc:703f0a183dce3a1d1b9466ef89ef2416 +INFO:root:PassingDataObject: nmdc:7f3fc33d172e057729da341f61ef4532 +INFO:root:PassingDataObject: nmdc:466994ddeeacbe52c5de52006cf16f23 +INFO:root:PassingDataObject: nmdc:5287f4952ae3161a3f79f236a2f0440e +INFO:root:PassingDataObject: nmdc:1fe89bc6ddb96128aae90ecdadf55c53 INFO:root:PassingDataObject: nmdc:7dd00ef41b0c66d38f7007d733d6abc8 INFO:root:PassingDataObject: nmdc:0d4d65ce0f72e34322203549c8236a26 INFO:root:PassingDataObject: nmdc:3531b5edbd991fa3245e5aa8b11cfa2e +INFO:root:PassingDataObject: nmdc:b4a1dc2365e73446008fbad92e2462e3 +INFO:root:PassingDataObject: nmdc:487d4720adbcc44880268a6f0ebc7526 +INFO:root:PassingDataObject: nmdc:9ea7bd0a9922f2ac47cb8026f4674db4 INFO:root:PassingDataObject: nmdc:ab66bfdeb07ed6cd8a6a830223d2abe2 -INFO:root:PassingDataObject: nmdc:f6816c53714ffa2fed0d2800479d33a2 INFO:root:PassingDataObject: nmdc:cfbaddb379e2057f9861ad8198cc9f88 -INFO:root:PassingDataObject: nmdc:7f3fc33d172e057729da341f61ef4532 -INFO:root:PassingDataObject: nmdc:c80b9a6d4e5da0a0baf50e3dd082cd1d +INFO:root:PassingDataObject: nmdc:703f0a183dce3a1d1b9466ef89ef2416 +INFO:root:PassingDataObject: nmdc:f6816c53714ffa2fed0d2800479d33a2 INFO:root:PassingDataObject: nmdc:24f82681ecbf997b36a1c3c0218f43b6 -INFO:root:PassingDataObject: nmdc:1fe89bc6ddb96128aae90ecdadf55c53 -INFO:root:PassingDataObject: nmdc:487d4720adbcc44880268a6f0ebc7526 -INFO:root:PassingDataObject: nmdc:5287f4952ae3161a3f79f236a2f0440e -INFO:root:PassingDataObject: nmdc:b4a1dc2365e73446008fbad92e2462e3 +INFO:root:PassingDataObject: nmdc:663f67b0d49b8bd89ae51fc905f27106 INFO:root:PassingDataObject: nmdc:05b1d76a2fb7f32cdfd74b00f98b3afc INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 @@ -3225,56 +3225,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, ReadBased Analysis Activity for nmdc:mga0j019 -INFO:root:PassingDataObject: nmdc:ebdd87b9c03afcd3253386926942a3d7 INFO:root:PassingDataObject: nmdc:0abce45e3702eb3f6fcad6cd6de93965 +INFO:root:PassingDataObject: nmdc:23dcdd951428db0e7ac83047307c04c2 +INFO:root:PassingDataObject: nmdc:ae85c806846b65e5179dfc5c4e593df8 INFO:root:PassingDataObject: nmdc:395441e566a48a7f3fd7661e02c39b46 INFO:root:PassingDataObject: nmdc:0eac886070886288d61760a4ef91b9f3 -INFO:root:PassingDataObject: nmdc:ae85c806846b65e5179dfc5c4e593df8 -INFO:root:PassingDataObject: nmdc:570a1044d48814b42fc253d610b8675d -INFO:root:PassingDataObject: nmdc:23dcdd951428db0e7ac83047307c04c2 INFO:root:PassingDataObject: nmdc:1b368068e335e30cecd46034a93680db +INFO:root:PassingDataObject: nmdc:ebdd87b9c03afcd3253386926942a3d7 +INFO:root:PassingDataObject: nmdc:570a1044d48814b42fc253d610b8675d INFO:root:PassingDataObject: nmdc:806dbb35c8025db29d569c758ddb2115 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, Assembly Activity for nmdc:mga0j019 -INFO:root:PassingDataObject: nmdc:0cc57d5c5c54980c60fa4a82d10d2e76 INFO:root:PassingDataObject: nmdc:5ac7cc71adc614863f7ee748a29300b4 -INFO:root:PassingDataObject: nmdc:0ae32293769ba42f0691f7f2de1d26a8 -INFO:root:PassingDataObject: nmdc:a7b22ff3e4c2e2c671fba3623685b401 INFO:root:PassingDataObject: nmdc:ae1d558356ea6581b2d74b22ea2e1fff +INFO:root:PassingDataObject: nmdc:a7b22ff3e4c2e2c671fba3623685b401 +INFO:root:PassingDataObject: nmdc:0cc57d5c5c54980c60fa4a82d10d2e76 +INFO:root:PassingDataObject: nmdc:0ae32293769ba42f0691f7f2de1d26a8 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, Annotation Activity for nmdc:mga0j019 -INFO:root:PassingDataObject: nmdc:4705a8260d7ecd3a6bc1c2c7a200a875 -INFO:root:PassingDataObject: nmdc:29dd3dd71ca1fb3bd503ab2ad8f18df3 -INFO:root:PassingDataObject: nmdc:2297a381c0d56b25280af1d9e2661a4d -INFO:root:PassingDataObject: nmdc:c7ef7313b8cec68efc49fa108b74abd0 -INFO:root:PassingDataObject: nmdc:a8132b0c5dec353ce97ce3266c3ba360 -INFO:root:PassingDataObject: nmdc:d6c7f42834a5bcceb33756eef205d48c -INFO:root:PassingDataObject: nmdc:187ecb5464dd3fd313f364f2f9a43e37 -INFO:root:PassingDataObject: nmdc:f492e879a8f2c930b09600a5e8b6fc12 INFO:root:PassingDataObject: nmdc:74cbb77c32db87fef495027295f4ba14 -INFO:root:PassingDataObject: nmdc:383cf136cd1005dcce6d59af5786a708 -INFO:root:PassingDataObject: nmdc:e81ae6b1512b7123de652e8d22933f7d -INFO:root:PassingDataObject: nmdc:cbe6506e40cec024ab157ac0d849fd62 -INFO:root:PassingDataObject: nmdc:05e09f98c7937d09d54b1c960be78360 -INFO:root:PassingDataObject: nmdc:ca6422e0593678d8de4331d961633b9a +INFO:root:PassingDataObject: nmdc:187ecb5464dd3fd313f364f2f9a43e37 INFO:root:PassingDataObject: nmdc:0314f93844d8d4205fb877a4de9e2590 INFO:root:PassingDataObject: nmdc:7904f95d105c6fe520c550d0944f7f1d -INFO:root:PassingDataObject: nmdc:2d36ce58d7eebf4b81fb8ac703bd5d06 +INFO:root:PassingDataObject: nmdc:f492e879a8f2c930b09600a5e8b6fc12 INFO:root:PassingDataObject: nmdc:b00ca730517ff4d992cb138fed15de90 +INFO:root:PassingDataObject: nmdc:383cf136cd1005dcce6d59af5786a708 +INFO:root:PassingDataObject: nmdc:4705a8260d7ecd3a6bc1c2c7a200a875 +INFO:root:PassingDataObject: nmdc:2d36ce58d7eebf4b81fb8ac703bd5d06 +INFO:root:PassingDataObject: nmdc:ca6422e0593678d8de4331d961633b9a +INFO:root:PassingDataObject: nmdc:a8132b0c5dec353ce97ce3266c3ba360 +INFO:root:PassingDataObject: nmdc:c7ef7313b8cec68efc49fa108b74abd0 +INFO:root:PassingDataObject: nmdc:05e09f98c7937d09d54b1c960be78360 INFO:root:PassingDataObject: nmdc:9ba8f41f07e372904d5048e0ee303066 +INFO:root:PassingDataObject: nmdc:2297a381c0d56b25280af1d9e2661a4d +INFO:root:PassingDataObject: nmdc:29dd3dd71ca1fb3bd503ab2ad8f18df3 +INFO:root:PassingDataObject: nmdc:cbe6506e40cec024ab157ac0d849fd62 +INFO:root:PassingDataObject: nmdc:d6c7f42834a5bcceb33756eef205d48c +INFO:root:PassingDataObject: nmdc:e81ae6b1512b7123de652e8d22933f7d INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, MAGs Analysis Activity for nmdc:mga0j019 -INFO:root:PassingDataObject: nmdc:5f4e64ea148290f572eb40a63b12271c INFO:root:PassingDataObject: nmdc:01d85cacfaf27a02cb88d3b46182e35b +INFO:root:PassingDataObject: nmdc:5f4e64ea148290f572eb40a63b12271c INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208367 @@ -3293,49 +3293,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208369 INFO:root:found 1 records INFO:root:record: nmdc:a2f241b757770afdc17c5f9ec03b1d20, ReadBased Analysis Activity for nmdc:mga0dj57 -INFO:root:PassingDataObject: nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 -INFO:root:PassingDataObject: nmdc:86b04c033ff5adda542213f73b767aa7 -INFO:root:PassingDataObject: nmdc:cef21d5fe576d361833aa3df98d4b436 -INFO:root:PassingDataObject: nmdc:a3e0be12cb5ac87419db27de68ec2954 INFO:root:PassingDataObject: nmdc:49c4b6496f7f81baadb792cc334276c1 +INFO:root:PassingDataObject: nmdc:a3e0be12cb5ac87419db27de68ec2954 +INFO:root:PassingDataObject: nmdc:86b04c033ff5adda542213f73b767aa7 INFO:root:PassingDataObject: nmdc:86979a02b7368694226c22c70adee6fe +INFO:root:PassingDataObject: nmdc:c989dce0710ad2c74636dc714bd61cfd INFO:root:PassingDataObject: 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-INFO:root:PassingDataObject: nmdc:245bd47165e85215955550b566497026 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208369 INFO:root:found 1 records INFO:root:record: nmdc:a2f241b757770afdc17c5f9ec03b1d20, Annotation Activity for nmdc:mga0dj57 +INFO:root:PassingDataObject: nmdc:5e7f1778772fd67574461a6e257b3cfc +INFO:root:PassingDataObject: nmdc:a5598af58283a8bfb371daa418031545 +INFO:root:PassingDataObject: nmdc:6c2438503916e6f3885e326474abace2 +INFO:root:PassingDataObject: nmdc:863fb0ae7e814e4e7995b258cd3882ec INFO:root:PassingDataObject: nmdc:b10fcf59f096610bf3bdd3f85029179f +INFO:root:PassingDataObject: nmdc:6d861228cb9d88658944e6548b483d41 +INFO:root:PassingDataObject: nmdc:ea62903cf25b10bd865e913b0f8e7f2e +INFO:root:PassingDataObject: nmdc:a98e511b5e9fd9588682c0d3d6f34196 INFO:root:PassingDataObject: nmdc:39188cb52cc0760b05e05bf17cfb5238 +INFO:root:PassingDataObject: nmdc:fda34fdba934ea1532806bf223c45d34 +INFO:root:PassingDataObject: nmdc:c33c45f986abf4b345e3d24b6cf8fdcf INFO:root:PassingDataObject: nmdc:791ce1f6b5ee631925eef93cd90bb735 INFO:root:PassingDataObject: nmdc:fa362ced809be4a33c7deb7ddc934722 -INFO:root:PassingDataObject: nmdc:b1add66d2eb4848e4a755c2f5d8469f6 +INFO:root:PassingDataObject: nmdc:8b10d214e5c59d1c4655edf72020d198 +INFO:root:PassingDataObject: nmdc:c836726bca18a3f84d4481f0d53c7add INFO:root:PassingDataObject: nmdc:e8c77231ae5e4799410c0add40c2639b -INFO:root:PassingDataObject: nmdc:fda34fdba934ea1532806bf223c45d34 -INFO:root:PassingDataObject: nmdc:6d861228cb9d88658944e6548b483d41 +INFO:root:PassingDataObject: nmdc:b1add66d2eb4848e4a755c2f5d8469f6 INFO:root:PassingDataObject: nmdc:6057b953f407a307e0dc1f6fb91336bf -INFO:root:PassingDataObject: nmdc:863fb0ae7e814e4e7995b258cd3882ec -INFO:root:PassingDataObject: nmdc:6c2438503916e6f3885e326474abace2 -INFO:root:PassingDataObject: nmdc:5e7f1778772fd67574461a6e257b3cfc INFO:root:PassingDataObject: nmdc:a335f5c95610c998235cc673f60a3572 -INFO:root:PassingDataObject: nmdc:ea62903cf25b10bd865e913b0f8e7f2e -INFO:root:PassingDataObject: nmdc:8b10d214e5c59d1c4655edf72020d198 -INFO:root:PassingDataObject: nmdc:c33c45f986abf4b345e3d24b6cf8fdcf -INFO:root:PassingDataObject: nmdc:c836726bca18a3f84d4481f0d53c7add -INFO:root:PassingDataObject: nmdc:a5598af58283a8bfb371daa418031545 -INFO:root:PassingDataObject: nmdc:a98e511b5e9fd9588682c0d3d6f34196 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208369 @@ -3354,55 +3354,55 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d38a56c9121372e INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, Read QC Activity for nmdc:mga0er40 -INFO:root:PassingDataObject: nmdc:e2192712dc05c20684d9dd64c7fff23d INFO:root:PassingDataObject: nmdc:6a5ae0143648a06f48f6802db863fd4b +INFO:root:PassingDataObject: nmdc:e2192712dc05c20684d9dd64c7fff23d INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, ReadBased Analysis Activity for nmdc:mga0er40 -INFO:root:PassingDataObject: nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 INFO:root:PassingDataObject: nmdc:8c698b534da4300aa2dfc3c1165dbaab -INFO:root:PassingDataObject: nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 -INFO:root:PassingDataObject: nmdc:a1e866752a2f454f73d8aebae359c4e7 -INFO:root:PassingDataObject: nmdc:03459c5c2cf0e48a33083f182bba3a17 -INFO:root:PassingDataObject: nmdc:2328978e8c33fda06a5a5895b80c8241 INFO:root:PassingDataObject: nmdc:f1a598e4b9143836d1dc3b3db23cdf94 +INFO:root:PassingDataObject: nmdc:2328978e8c33fda06a5a5895b80c8241 INFO:root:PassingDataObject: nmdc:7dfa51d15f43c61bee02de8638c6c077 INFO:root:PassingDataObject: nmdc:3fc11e1963abfe9f0ab36d766c9eb1ea +INFO:root:PassingDataObject: nmdc:a1e866752a2f454f73d8aebae359c4e7 +INFO:root:PassingDataObject: nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 +INFO:root:PassingDataObject: nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 +INFO:root:PassingDataObject: nmdc:03459c5c2cf0e48a33083f182bba3a17 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, Assembly Activity for nmdc:mga0er40 -INFO:root:PassingDataObject: nmdc:2cdbb7442338ecf9db8716b5035a5215 INFO:root:PassingDataObject: nmdc:671a6e23049e517f506961cfd20861ef -INFO:root:PassingDataObject: nmdc:958b61e9f607403322034a4665030355 INFO:root:PassingDataObject: nmdc:7d899a65109456d3c071422ed902f1f2 +INFO:root:PassingDataObject: nmdc:2cdbb7442338ecf9db8716b5035a5215 INFO:root:PassingDataObject: nmdc:35cf7defb880a0b170763cb8195ef93f +INFO:root:PassingDataObject: nmdc:958b61e9f607403322034a4665030355 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, Annotation Activity for nmdc:mga0er40 -INFO:root:PassingDataObject: nmdc:c241751bca7d1249feffb174be9ce535 -INFO:root:PassingDataObject: nmdc:592822329b14f3e65f9590f56caf48db +INFO:root:PassingDataObject: nmdc:6b4a66b5661f9c85e94d4197a58a0a2f INFO:root:PassingDataObject: nmdc:8b937b6d1ce87ec140e5e6eacbbf9125 -INFO:root:PassingDataObject: nmdc:15ef1a5d9a66f547087fae581a862cf4 -INFO:root:PassingDataObject: nmdc:de947f1ffcdf7c47e965054e2474f5b9 -INFO:root:PassingDataObject: nmdc:c0a46859674ea0e7478cfc46fceda5bd -INFO:root:PassingDataObject: nmdc:8f7a9db83aca16ab3867a25bd62f64ed INFO:root:PassingDataObject: nmdc:691b4b540b36332e0b30987d723b837e -INFO:root:PassingDataObject: nmdc:83fb4ab09ea6ea316153d28bf4b97e76 -INFO:root:PassingDataObject: nmdc:35f5076bd215bc0492b0f13aa0d31dec -INFO:root:PassingDataObject: nmdc:3545f4a2cd8508bf62991a4cd0dc6904 -INFO:root:PassingDataObject: nmdc:ee674541a52b6be4ac092d9a8d109438 INFO:root:PassingDataObject: nmdc:bfc880cd5119e6670737b4ba976be067 -INFO:root:PassingDataObject: nmdc:6b4a66b5661f9c85e94d4197a58a0a2f -INFO:root:PassingDataObject: nmdc:395e5f88e888a10dd31a5ed59e8e9bb3 -INFO:root:PassingDataObject: nmdc:5ad996003a6e63d48d91f8f0ddf049fc +INFO:root:PassingDataObject: nmdc:c241751bca7d1249feffb174be9ce535 +INFO:root:PassingDataObject: nmdc:c0a46859674ea0e7478cfc46fceda5bd +INFO:root:PassingDataObject: nmdc:ee674541a52b6be4ac092d9a8d109438 INFO:root:PassingDataObject: nmdc:e54a76dd649658cb3a55fc5bcc9bde1b +INFO:root:PassingDataObject: nmdc:395e5f88e888a10dd31a5ed59e8e9bb3 INFO:root:PassingDataObject: nmdc:f9e119e12727e8dbe18fb15ff9cc77dd +INFO:root:PassingDataObject: nmdc:de947f1ffcdf7c47e965054e2474f5b9 +INFO:root:PassingDataObject: nmdc:592822329b14f3e65f9590f56caf48db +INFO:root:PassingDataObject: nmdc:35f5076bd215bc0492b0f13aa0d31dec +INFO:root:PassingDataObject: nmdc:3545f4a2cd8508bf62991a4cd0dc6904 +INFO:root:PassingDataObject: nmdc:5ad996003a6e63d48d91f8f0ddf049fc +INFO:root:PassingDataObject: nmdc:83fb4ab09ea6ea316153d28bf4b97e76 +INFO:root:PassingDataObject: nmdc:8f7a9db83aca16ab3867a25bd62f64ed +INFO:root:PassingDataObject: nmdc:15ef1a5d9a66f547087fae581a862cf4 INFO:root:PassingDataObject: nmdc:b81cac89bfaceaba629caf0acd6e29af INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 @@ -3422,63 +3422,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:62915d08fc40413 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, Read QC Activity for nmdc:mga0e015 -INFO:root:PassingDataObject: nmdc:140a0c1c385baaf44b5b1efba9c6a613 INFO:root:PassingDataObject: nmdc:a766b612140efdfd4de74ecde249ed69 +INFO:root:PassingDataObject: nmdc:140a0c1c385baaf44b5b1efba9c6a613 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, ReadBased Analysis Activity for nmdc:mga0e015 +INFO:root:PassingDataObject: nmdc:63295a9f37f072ec50f1cc068b10a3da +INFO:root:PassingDataObject: nmdc:964601f9f2f2654739fbbd0fb85f5c7f INFO:root:PassingDataObject: nmdc:9f5e1b2997788148eca1ab781795ae50 -INFO:root:PassingDataObject: nmdc:fd28416964f6146716707df4d856f339 -INFO:root:PassingDataObject: nmdc:e166b8ead19eb664d59f46d1a6c22059 -INFO:root:PassingDataObject: nmdc:93505187db42e12c4de160c3baed5d0c INFO:root:PassingDataObject: nmdc:1d8d68b80c2c2c0caa60cb3b047d1a64 -INFO:root:PassingDataObject: nmdc:d0f17a3062772249181b9a0b82b62bc3 -INFO:root:PassingDataObject: nmdc:964601f9f2f2654739fbbd0fb85f5c7f -INFO:root:PassingDataObject: nmdc:63295a9f37f072ec50f1cc068b10a3da INFO:root:PassingDataObject: nmdc:ae90990c3bc65654123208de0e858227 +INFO:root:PassingDataObject: nmdc:d0f17a3062772249181b9a0b82b62bc3 +INFO:root:PassingDataObject: nmdc:fd28416964f6146716707df4d856f339 +INFO:root:PassingDataObject: nmdc:93505187db42e12c4de160c3baed5d0c +INFO:root:PassingDataObject: nmdc:e166b8ead19eb664d59f46d1a6c22059 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, Assembly Activity for nmdc:mga0e015 -INFO:root:PassingDataObject: nmdc:acfbf420a25abd4ec18b3c25fdf16c2f INFO:root:PassingDataObject: nmdc:968b8aa8461142766eea787e229d971e INFO:root:PassingDataObject: nmdc:4ce6e048a1abb64af4aa1a281990a0a5 -INFO:root:PassingDataObject: nmdc:a962972ed04d5d2b7e432a78e54b0b2e INFO:root:PassingDataObject: nmdc:c792aba535f3665c3a33604827cb4752 +INFO:root:PassingDataObject: nmdc:acfbf420a25abd4ec18b3c25fdf16c2f +INFO:root:PassingDataObject: nmdc:a962972ed04d5d2b7e432a78e54b0b2e INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, Annotation Activity for nmdc:mga0e015 -INFO:root:PassingDataObject: nmdc:4e9e546e9bca74bcb0b989a9d775744d -INFO:root:PassingDataObject: nmdc:12b9c677f03966c4206db13a960ce7e7 -INFO:root:PassingDataObject: nmdc:a923ff8ef375ad0c1cf66ae068c3ddf1 -INFO:root:PassingDataObject: nmdc:a0f25bba10c0ee7b9ad82d2a96201a17 +INFO:root:PassingDataObject: nmdc:a4f6b368f1c40fefe609b074e090241b +INFO:root:PassingDataObject: nmdc:d5015e3348608e75e1da88e009939f8f INFO:root:PassingDataObject: nmdc:6f66c530a36e704f18a51cce46a3f067 +INFO:root:PassingDataObject: nmdc:a0f25bba10c0ee7b9ad82d2a96201a17 +INFO:root:PassingDataObject: nmdc:9bc97c0999b8f9e89bc174887570c6c0 +INFO:root:PassingDataObject: nmdc:b9b0e6937259ced132e6d760e36fccfc +INFO:root:PassingDataObject: nmdc:b8595671605eaf249da097f778c2f4b1 +INFO:root:PassingDataObject: nmdc:a94d4d26100209ec34ef9b12eb75fc9f INFO:root:PassingDataObject: nmdc:f4dee419361698b9ffd727cb44bc46be -INFO:root:PassingDataObject: nmdc:4c814cc35cb3c162e5be52826f0a9576 -INFO:root:PassingDataObject: nmdc:d5015e3348608e75e1da88e009939f8f INFO:root:PassingDataObject: nmdc:e4e6aa8e6cc82523cc8cb657e69e3781 -INFO:root:PassingDataObject: nmdc:4360a8e380c0aefd129cc944334c426c -INFO:root:PassingDataObject: nmdc:b2883973758cc61003534b701d0fedd4 -INFO:root:PassingDataObject: nmdc:a4f6b368f1c40fefe609b074e090241b -INFO:root:PassingDataObject: nmdc:194fa971b70c1b40ee2de7de2edafc3e -INFO:root:PassingDataObject: nmdc:a94d4d26100209ec34ef9b12eb75fc9f -INFO:root:PassingDataObject: nmdc:b9b0e6937259ced132e6d760e36fccfc INFO:root:PassingDataObject: nmdc:5e90c07547804280e9df3d849e64b92b +INFO:root:PassingDataObject: nmdc:4c814cc35cb3c162e5be52826f0a9576 +INFO:root:PassingDataObject: nmdc:4e9e546e9bca74bcb0b989a9d775744d INFO:root:PassingDataObject: nmdc:26b47aeef32f6421938b093ff272e0ca -INFO:root:PassingDataObject: nmdc:b8595671605eaf249da097f778c2f4b1 -INFO:root:PassingDataObject: nmdc:9bc97c0999b8f9e89bc174887570c6c0 +INFO:root:PassingDataObject: nmdc:a923ff8ef375ad0c1cf66ae068c3ddf1 +INFO:root:PassingDataObject: nmdc:194fa971b70c1b40ee2de7de2edafc3e +INFO:root:PassingDataObject: nmdc:4360a8e380c0aefd129cc944334c426c +INFO:root:PassingDataObject: nmdc:12b9c677f03966c4206db13a960ce7e7 +INFO:root:PassingDataObject: nmdc:b2883973758cc61003534b701d0fedd4 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, MAGs Analysis Activity for nmdc:mga0e015 -INFO:root:PassingDataObject: nmdc:58dd3348ab2b1e3e8becdeffd1e7d292 INFO:root:PassingDataObject: nmdc:1ab57c6dd9a48629307dcfff1b90c6a3 +INFO:root:PassingDataObject: nmdc:58dd3348ab2b1e3e8becdeffd1e7d292 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208374 @@ -3490,55 +3490,55 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:acee10e153052c8 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, Read QC Activity for nmdc:mga02973 -INFO:root:PassingDataObject: nmdc:b66b8bd45f2be22655bf6687aace8976 INFO:root:PassingDataObject: nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 +INFO:root:PassingDataObject: nmdc:b66b8bd45f2be22655bf6687aace8976 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, ReadBased Analysis Activity for nmdc:mga02973 -INFO:root:PassingDataObject: nmdc:44b662598ea9b8e73f3cc113a1700ac8 -INFO:root:PassingDataObject: nmdc:31070d6b6936b8d60f2e50ce54e810e9 INFO:root:PassingDataObject: nmdc:51c6216d13cc32e0241d8a9ea665aaae -INFO:root:PassingDataObject: nmdc:da65b05b21fcf8d956b23d4d890513b7 -INFO:root:PassingDataObject: nmdc:c68c5efe3a3c690263e9f7b46d20c680 INFO:root:PassingDataObject: nmdc:2dd3e449e4fd7f507ef6f45771e58fea INFO:root:PassingDataObject: nmdc:761eaf4bdfc92c48be812f522d6a2d7c -INFO:root:PassingDataObject: nmdc:2ca4588825f056c60678304f4ece7354 +INFO:root:PassingDataObject: nmdc:31070d6b6936b8d60f2e50ce54e810e9 +INFO:root:PassingDataObject: nmdc:da65b05b21fcf8d956b23d4d890513b7 INFO:root:PassingDataObject: nmdc:cedec6a5585e1f6e000aeed9fd24dbfa +INFO:root:PassingDataObject: nmdc:2ca4588825f056c60678304f4ece7354 +INFO:root:PassingDataObject: nmdc:c68c5efe3a3c690263e9f7b46d20c680 +INFO:root:PassingDataObject: nmdc:44b662598ea9b8e73f3cc113a1700ac8 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, Assembly Activity for nmdc:mga02973 INFO:root:PassingDataObject: nmdc:b067aacc722dec7f7d5bf6bcb0627dd8 +INFO:root:PassingDataObject: nmdc:13569543ba23307e5be94771b7e840bc INFO:root:PassingDataObject: nmdc:e762343ae2d052da184e7437fcd8e697 INFO:root:PassingDataObject: nmdc:47d3dae6f07a5e91fdb438933591353d -INFO:root:PassingDataObject: nmdc:13569543ba23307e5be94771b7e840bc INFO:root:PassingDataObject: nmdc:447d8460a5baeef3df16d74ace1aed5a INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, Annotation Activity for nmdc:mga02973 +INFO:root:PassingDataObject: nmdc:5bba5eb941d060d87a1f5b1347c29a83 INFO:root:PassingDataObject: nmdc:32d3659ce57ef5809fdb6fc84d02ba39 -INFO:root:PassingDataObject: nmdc:67b3e809cb8767ebf44da1b759c8ae08 -INFO:root:PassingDataObject: nmdc:3a1c7fcc24437141eb17989cdab4d783 -INFO:root:PassingDataObject: nmdc:f5038da44e4431e8c9c23bd94b2f1750 -INFO:root:PassingDataObject: nmdc:7a061ff35b8ca2b5c1c78a00cd788692 -INFO:root:PassingDataObject: nmdc:20cf06a8ccdd228fd8087348a1570d97 -INFO:root:PassingDataObject: nmdc:1f7eeb4e0892b83e103a9b88ec8fc918 -INFO:root:PassingDataObject: nmdc:56641b6c0f434c87534ff1107a3e0465 INFO:root:PassingDataObject: nmdc:0c5e2e57fa9456e88fd5c8f7e0fbd3b3 -INFO:root:PassingDataObject: nmdc:45ec22da38c22dfa46bf0274f78b8be4 -INFO:root:PassingDataObject: nmdc:91de13e8f6d5d9d537adbb1f5727056a -INFO:root:PassingDataObject: nmdc:b119a88dba20aca7c8b45db552bb302e -INFO:root:PassingDataObject: nmdc:5bba5eb941d060d87a1f5b1347c29a83 +INFO:root:PassingDataObject: nmdc:fddbb285c0226dc713b04323a40a8ca6 +INFO:root:PassingDataObject: nmdc:56641b6c0f434c87534ff1107a3e0465 INFO:root:PassingDataObject: nmdc:01e3915b5c7fbac4a067e066ad4ada27 +INFO:root:PassingDataObject: nmdc:f5038da44e4431e8c9c23bd94b2f1750 +INFO:root:PassingDataObject: nmdc:b119a88dba20aca7c8b45db552bb302e +INFO:root:PassingDataObject: nmdc:3a1c7fcc24437141eb17989cdab4d783 INFO:root:PassingDataObject: nmdc:3838025565d8270f85ab3feef26fbbb4 +INFO:root:PassingDataObject: nmdc:45ec22da38c22dfa46bf0274f78b8be4 INFO:root:PassingDataObject: nmdc:25faf1640d02135a5fc44c58d0853749 +INFO:root:PassingDataObject: nmdc:67b3e809cb8767ebf44da1b759c8ae08 +INFO:root:PassingDataObject: nmdc:1f7eeb4e0892b83e103a9b88ec8fc918 +INFO:root:PassingDataObject: nmdc:7a061ff35b8ca2b5c1c78a00cd788692 +INFO:root:PassingDataObject: nmdc:91de13e8f6d5d9d537adbb1f5727056a INFO:root:PassingDataObject: nmdc:39d2ba732ba2714016e9b2a1a7aaf7a4 -INFO:root:PassingDataObject: nmdc:fddbb285c0226dc713b04323a40a8ca6 +INFO:root:PassingDataObject: nmdc:20cf06a8ccdd228fd8087348a1570d97 INFO:root:PassingDataObject: nmdc:2791738948a70480aa1a11976b68557e INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 @@ -3566,13 +3566,13 @@ INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, ReadBased Analysis Activity for nmdc:mga0en49 INFO:root:PassingDataObject: nmdc:b6eae3f25e58068ee532e869d9a054e7 -INFO:root:PassingDataObject: nmdc:39aba2cd0681e634e5a856a1643ad65d -INFO:root:PassingDataObject: nmdc:1c08a38ec232296a9e1375d320b82f70 +INFO:root:PassingDataObject: nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 INFO:root:PassingDataObject: nmdc:d19a860a2ccadd00fbba8c5f6e9feffc INFO:root:PassingDataObject: nmdc:27a73190e6197cffeecf2de17075aaf5 INFO:root:PassingDataObject: nmdc:60cd89cae748fbf618f821d0967f8882 -INFO:root:PassingDataObject: nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 +INFO:root:PassingDataObject: nmdc:1c08a38ec232296a9e1375d320b82f70 INFO:root:PassingDataObject: nmdc:fe497a4e41456277815a2f528d02134d +INFO:root:PassingDataObject: nmdc:39aba2cd0681e634e5a856a1643ad65d INFO:root:PassingDataObject: nmdc:0bc9789f2ba5b43578924cdee86c8069 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 @@ -3580,41 +3580,41 @@ INFO:root:set_name: metagenome_assembly_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, Assembly Activity for nmdc:mga0en49 INFO:root:PassingDataObject: nmdc:3e126ec5123915148fea43200b0129d1 -INFO:root:PassingDataObject: nmdc:66587bdf30209e48bdc5c0555c8d3c91 INFO:root:PassingDataObject: nmdc:2822f8e3c727b92fe32c02907ea483c3 INFO:root:PassingDataObject: nmdc:73fb1fad2ba63e15932b314b73286aa4 +INFO:root:PassingDataObject: nmdc:66587bdf30209e48bdc5c0555c8d3c91 INFO:root:PassingDataObject: nmdc:fe15d11d1cb57b25196f91742fc42007 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, Annotation Activity for nmdc:mga0en49 -INFO:root:PassingDataObject: nmdc:beceffa1bc5901577cf7758864e2c018 -INFO:root:PassingDataObject: nmdc:4640240f7f8f6af6851c6496129953ad -INFO:root:PassingDataObject: nmdc:b33ee64163da3a3261e49d128a4e37fe -INFO:root:PassingDataObject: nmdc:7c61ae0f9e32ff1a38af3361b4749e83 INFO:root:PassingDataObject: nmdc:86ffb86493aff9d733388225309985f7 +INFO:root:PassingDataObject: nmdc:7416f3c5786f60b9552d769dc18f5ecb INFO:root:PassingDataObject: nmdc:0f639c755a0cdb47319eff64815f5909 -INFO:root:PassingDataObject: nmdc:949286bb6d897934486b494ef4db4f24 -INFO:root:PassingDataObject: nmdc:83d0800e9ed6d005f65df585e53c33a3 +INFO:root:PassingDataObject: nmdc:85d8cbdffc18147e221cca65d92b0400 +INFO:root:PassingDataObject: nmdc:10ffb42b64642e5bac6e4cc5c8e87c77 INFO:root:PassingDataObject: nmdc:b5cfd9b8e8be3f12f4fe8a21a8e7d2d2 -INFO:root:PassingDataObject: nmdc:636bdddd17321c43638fdd1946a9e8e8 INFO:root:PassingDataObject: nmdc:ccc986c72525f100ecbf090654c8c196 -INFO:root:PassingDataObject: nmdc:10ffb42b64642e5bac6e4cc5c8e87c77 INFO:root:PassingDataObject: nmdc:64acf8adc1fa39c1e585fe6e7a3cf714 -INFO:root:PassingDataObject: nmdc:a14f04811a9f8f6587bb0151db3942c2 -INFO:root:PassingDataObject: nmdc:7416f3c5786f60b9552d769dc18f5ecb INFO:root:PassingDataObject: nmdc:0bf169e66bef4fc33db9044dc1712de2 -INFO:root:PassingDataObject: nmdc:85d8cbdffc18147e221cca65d92b0400 -INFO:root:PassingDataObject: nmdc:b168ce36d4126b0ec9d472b425bc3ef9 INFO:root:PassingDataObject: nmdc:2d9c0848b1516c547b578eb80a2dd217 +INFO:root:PassingDataObject: nmdc:b168ce36d4126b0ec9d472b425bc3ef9 +INFO:root:PassingDataObject: nmdc:4640240f7f8f6af6851c6496129953ad +INFO:root:PassingDataObject: nmdc:a14f04811a9f8f6587bb0151db3942c2 +INFO:root:PassingDataObject: nmdc:949286bb6d897934486b494ef4db4f24 +INFO:root:PassingDataObject: nmdc:b33ee64163da3a3261e49d128a4e37fe +INFO:root:PassingDataObject: nmdc:636bdddd17321c43638fdd1946a9e8e8 +INFO:root:PassingDataObject: nmdc:83d0800e9ed6d005f65df585e53c33a3 +INFO:root:PassingDataObject: nmdc:beceffa1bc5901577cf7758864e2c018 +INFO:root:PassingDataObject: nmdc:7c61ae0f9e32ff1a38af3361b4749e83 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, MAGs Analysis Activity for nmdc:mga0en49 -INFO:root:PassingDataObject: nmdc:7900edbf5c0da7ac80ac719eb5256f49 INFO:root:PassingDataObject: nmdc:ef52cb74df606f6c6ea546e5eb9a2407 +INFO:root:PassingDataObject: nmdc:7900edbf5c0da7ac80ac719eb5256f49 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208375 @@ -3633,49 +3633,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208372 INFO:root:found 1 records INFO:root:record: nmdc:027d1088414a1e587cc9519f471ac7e5, ReadBased Analysis Activity for nmdc:mga0tp58 -INFO:root:PassingDataObject: nmdc:0d4aec24449645364b0bdb57d7de722f -INFO:root:PassingDataObject: nmdc:97f568b222020dacabc6c313c893225e INFO:root:PassingDataObject: nmdc:c5acddf8bf9749557d7883f0dd8b269d +INFO:root:PassingDataObject: nmdc:97f568b222020dacabc6c313c893225e +INFO:root:PassingDataObject: 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-INFO:root:PassingDataObject: nmdc:13c5321b515278681bf7813472ac1fd9 INFO:root:PassingDataObject: nmdc:4daba0991ac1ce4862bb25228a74d8ca +INFO:root:PassingDataObject: nmdc:13c5321b515278681bf7813472ac1fd9 +INFO:root:PassingDataObject: nmdc:896e7cf242e38d56af717f0cc31b4350 +INFO:root:PassingDataObject: nmdc:96cb29c54fd6ec82513ce930cb9773d2 +INFO:root:PassingDataObject: nmdc:0f6065de3d4d80ef2c2d6e6bd26591fd INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208372 INFO:root:found 1 records INFO:root:record: nmdc:027d1088414a1e587cc9519f471ac7e5, Annotation Activity for nmdc:mga0tp58 +INFO:root:PassingDataObject: nmdc:0591d299f220bb7bdcfbfc74c0d0981e +INFO:root:PassingDataObject: nmdc:33a077160b9849b25cf8db711f612337 +INFO:root:PassingDataObject: nmdc:d1956f7f147402342524a1d16ce0ee76 +INFO:root:PassingDataObject: nmdc:28ee4c766957753b0cadee6515da13a9 +INFO:root:PassingDataObject: nmdc:2ba9795443542f621d33895b0d18ae05 INFO:root:PassingDataObject: nmdc:4a2a31d07d2b8cb974477055d11c50b1 -INFO:root:PassingDataObject: nmdc:8a5d516bc04d6a0c581d7e86ab6a5df6 -INFO:root:PassingDataObject: nmdc:7873d0ba5149b267fd16c20e72519465 INFO:root:PassingDataObject: nmdc:81c7f5e42ab2c2730b7f5a0f27660f29 -INFO:root:PassingDataObject: nmdc:5d08aa3bcaa83f5bee7c11668d40dac7 -INFO:root:PassingDataObject: nmdc:28ee4c766957753b0cadee6515da13a9 -INFO:root:PassingDataObject: nmdc:fb0f3c5ae9a8b10358f635ffa96d6b42 +INFO:root:PassingDataObject: nmdc:34b22dfe836c514d60dc9139f8e842b6 INFO:root:PassingDataObject: nmdc:397f856f8dbcfdeb4115077ffbe17a9b -INFO:root:PassingDataObject: nmdc:98f3e11ca1c0df5120daf682b916d8ec -INFO:root:PassingDataObject: nmdc:33a077160b9849b25cf8db711f612337 +INFO:root:PassingDataObject: nmdc:fb0f3c5ae9a8b10358f635ffa96d6b42 INFO:root:PassingDataObject: nmdc:71d7b55970308d41e2bdd41a4df7d60d -INFO:root:PassingDataObject: nmdc:34b22dfe836c514d60dc9139f8e842b6 +INFO:root:PassingDataObject: nmdc:8a5d516bc04d6a0c581d7e86ab6a5df6 +INFO:root:PassingDataObject: nmdc:5d08aa3bcaa83f5bee7c11668d40dac7 INFO:root:PassingDataObject: nmdc:b2c0c2011c152314fda141899076011f -INFO:root:PassingDataObject: nmdc:0591d299f220bb7bdcfbfc74c0d0981e -INFO:root:PassingDataObject: nmdc:2ba9795443542f621d33895b0d18ae05 -INFO:root:PassingDataObject: nmdc:d1956f7f147402342524a1d16ce0ee76 +INFO:root:PassingDataObject: nmdc:ff2d3c83516531bc8075c2dd9f618faa +INFO:root:PassingDataObject: nmdc:98f3e11ca1c0df5120daf682b916d8ec INFO:root:PassingDataObject: nmdc:e7b6f1cd5a0a5e373667f1b39a1b7007 +INFO:root:PassingDataObject: nmdc:7873d0ba5149b267fd16c20e72519465 INFO:root:PassingDataObject: nmdc:c3a976a05ac20a4e5abd58f42e14f3ed -INFO:root:PassingDataObject: nmdc:ff2d3c83516531bc8075c2dd9f618faa INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208372 @@ -3694,63 +3694,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fe61b5e7c3aff7b INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, Read QC Activity for nmdc:mga0jp50 -INFO:root:PassingDataObject: nmdc:16735277dc68cdfdf4a0286b680f0584 INFO:root:PassingDataObject: nmdc:576fc5e7df52ca50320b49075f2b4ef4 +INFO:root:PassingDataObject: nmdc:16735277dc68cdfdf4a0286b680f0584 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, ReadBased Analysis Activity for nmdc:mga0jp50 -INFO:root:PassingDataObject: nmdc:4e43961184c283ad2c396054f79648b7 -INFO:root:PassingDataObject: nmdc:1efcea7031226523445910e22be4c2a8 -INFO:root:PassingDataObject: nmdc:8b8e79d2cf1780851ac71bd0ec51778f -INFO:root:PassingDataObject: nmdc:4967d9a0b3c1c769273f32bb536cef1a INFO:root:PassingDataObject: nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 +INFO:root:PassingDataObject: nmdc:6fd2822d1a3642667ad4df25ce2b6554 INFO:root:PassingDataObject: nmdc:6914d1f0b178d2b8b96a63066b368db2 INFO:root:PassingDataObject: nmdc:10d83e69db2f76a5b21c010d627401f2 -INFO:root:PassingDataObject: nmdc:6fd2822d1a3642667ad4df25ce2b6554 INFO:root:PassingDataObject: nmdc:16be67531d9be2bf5dff60892a736e6d +INFO:root:PassingDataObject: nmdc:1efcea7031226523445910e22be4c2a8 +INFO:root:PassingDataObject: nmdc:4e43961184c283ad2c396054f79648b7 +INFO:root:PassingDataObject: nmdc:4967d9a0b3c1c769273f32bb536cef1a +INFO:root:PassingDataObject: nmdc:8b8e79d2cf1780851ac71bd0ec51778f INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, Assembly Activity for nmdc:mga0jp50 +INFO:root:PassingDataObject: nmdc:a1f516729d4b43717221b9a070779b0c INFO:root:PassingDataObject: nmdc:f124bfc6fad15138f2ac7f37ad716773 +INFO:root:PassingDataObject: nmdc:8558a765a73d18aaa92d6cda63b1009f INFO:root:PassingDataObject: nmdc:50c99b3e08df9fc9d07649afdc61364b INFO:root:PassingDataObject: nmdc:68e888dba633139fb85132685e5db148 -INFO:root:PassingDataObject: nmdc:a1f516729d4b43717221b9a070779b0c -INFO:root:PassingDataObject: nmdc:8558a765a73d18aaa92d6cda63b1009f INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, Annotation Activity for nmdc:mga0jp50 -INFO:root:PassingDataObject: nmdc:5970c198eb3446ae20fbd3d206addb1a -INFO:root:PassingDataObject: nmdc:f70ad0e13393ebb3efcd38c3567c10f2 -INFO:root:PassingDataObject: nmdc:cb32c985ce30060d7bc7befdc3f6626e -INFO:root:PassingDataObject: nmdc:f5b420f9aab056ad35395f3729eaaf8d +INFO:root:PassingDataObject: nmdc:41b40b03066c2f60745176128db2c50c +INFO:root:PassingDataObject: nmdc:623ebdfcc8fc92e665684a94fdb035dc +INFO:root:PassingDataObject: nmdc:344ce0d3913a2b80fb6f7f9d766a7633 +INFO:root:PassingDataObject: nmdc:f47440f3184d82f921b99f9e4bbe15a5 INFO:root:PassingDataObject: nmdc:cca9357e25fb2008f673fa3aae26f644 +INFO:root:PassingDataObject: nmdc:e12515161bcd22aed5cb65f19e98a12e +INFO:root:PassingDataObject: nmdc:5970c198eb3446ae20fbd3d206addb1a INFO:root:PassingDataObject: nmdc:d685f7d35320b6cacc54e66beefd32fe +INFO:root:PassingDataObject: nmdc:b34ff55fbe68d030ab7b351923e4e0a0 +INFO:root:PassingDataObject: nmdc:f5b420f9aab056ad35395f3729eaaf8d INFO:root:PassingDataObject: nmdc:bbd9f024b74bc502f5d0eef5a7dea41d -INFO:root:PassingDataObject: nmdc:95ea5180130859ebf2e7d54922028b20 INFO:root:PassingDataObject: nmdc:5e4cd89ba25ed960f63fcb84f87277ad -INFO:root:PassingDataObject: nmdc:b34ff55fbe68d030ab7b351923e4e0a0 +INFO:root:PassingDataObject: nmdc:5f8f7af4278288db0949333ca2463039 +INFO:root:PassingDataObject: nmdc:f70ad0e13393ebb3efcd38c3567c10f2 +INFO:root:PassingDataObject: nmdc:95ea5180130859ebf2e7d54922028b20 +INFO:root:PassingDataObject: nmdc:6ce53e77b0fdc6a095d9a131df253878 INFO:root:PassingDataObject: nmdc:fe1aeeafc20b64b8e339727ddd738f61 -INFO:root:PassingDataObject: nmdc:f47440f3184d82f921b99f9e4bbe15a5 -INFO:root:PassingDataObject: nmdc:41b40b03066c2f60745176128db2c50c +INFO:root:PassingDataObject: nmdc:cb32c985ce30060d7bc7befdc3f6626e INFO:root:PassingDataObject: nmdc:36c0e1f80cb60aef125ff4dcb18a4a8a -INFO:root:PassingDataObject: nmdc:623ebdfcc8fc92e665684a94fdb035dc -INFO:root:PassingDataObject: nmdc:6ce53e77b0fdc6a095d9a131df253878 -INFO:root:PassingDataObject: nmdc:e12515161bcd22aed5cb65f19e98a12e -INFO:root:PassingDataObject: nmdc:5f8f7af4278288db0949333ca2463039 -INFO:root:PassingDataObject: nmdc:344ce0d3913a2b80fb6f7f9d766a7633 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, MAGs Analysis Activity for nmdc:mga0jp50 -INFO:root:PassingDataObject: nmdc:74e5f9a6b52323c1f7d3f5b922d4ee53 INFO:root:PassingDataObject: nmdc:e72003ca5fa8dc9dc3166b7d31816fb6 +INFO:root:PassingDataObject: nmdc:74e5f9a6b52323c1f7d3f5b922d4ee53 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208376 @@ -3762,56 +3762,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:3896cc46b145ba4 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, Read QC Activity for nmdc:mga0ry32 -INFO:root:PassingDataObject: nmdc:b7dc1bff51751b071366b1d582cc6c00 INFO:root:PassingDataObject: nmdc:7a38fec7d52c8fbb2a094bf8ca9db24e +INFO:root:PassingDataObject: nmdc:b7dc1bff51751b071366b1d582cc6c00 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, ReadBased Analysis Activity for nmdc:mga0ry32 -INFO:root:PassingDataObject: nmdc:9b1e862ed0340a16d8a3baed056f2934 -INFO:root:PassingDataObject: nmdc:4aa13bef1460c6e06f6bcb09b184894c INFO:root:PassingDataObject: nmdc:389a79d0558c6dcff23934998dd96b07 -INFO:root:PassingDataObject: nmdc:806b36d02366596de52d702a8bc60f5b -INFO:root:PassingDataObject: nmdc:12f872dde3c3b6dee75bf41e88515852 -INFO:root:PassingDataObject: nmdc:ca4a2523df1827f60864aa9441e09fba INFO:root:PassingDataObject: nmdc:84f9f57372a2980b08cb12fd17800b28 INFO:root:PassingDataObject: nmdc:9a8696952be8a44279ee1fbd0b0e2834 +INFO:root:PassingDataObject: nmdc:9b1e862ed0340a16d8a3baed056f2934 +INFO:root:PassingDataObject: nmdc:4aa13bef1460c6e06f6bcb09b184894c +INFO:root:PassingDataObject: nmdc:ca4a2523df1827f60864aa9441e09fba +INFO:root:PassingDataObject: nmdc:806b36d02366596de52d702a8bc60f5b INFO:root:PassingDataObject: nmdc:895bff8e573da1a654e7b2b48a9aa6d0 +INFO:root:PassingDataObject: nmdc:12f872dde3c3b6dee75bf41e88515852 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, Assembly Activity for nmdc:mga0ry32 -INFO:root:PassingDataObject: nmdc:94be8bdc393ccff73573e126cf3c1718 +INFO:root:PassingDataObject: nmdc:949f2181d65b8922aa60e6d59ac02711 INFO:root:PassingDataObject: nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 -INFO:root:PassingDataObject: nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 INFO:root:PassingDataObject: nmdc:8c906280a84b91d4ac4fcc9afdc82540 -INFO:root:PassingDataObject: nmdc:949f2181d65b8922aa60e6d59ac02711 +INFO:root:PassingDataObject: nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 +INFO:root:PassingDataObject: nmdc:94be8bdc393ccff73573e126cf3c1718 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, Annotation Activity for nmdc:mga0ry32 -INFO:root:PassingDataObject: nmdc:9d27c4e0111917a8b9c0d7ebd6285f54 -INFO:root:PassingDataObject: nmdc:1d54329d556d21ec58250ecf36b4af56 -INFO:root:PassingDataObject: nmdc:cf53fc6df9b8f4daab45ce4b422d962f -INFO:root:PassingDataObject: nmdc:4da23a432550f971ee117685cf52f42e -INFO:root:PassingDataObject: nmdc:c01dac5637ac9d32ee5e8135a3bf72d0 +INFO:root:PassingDataObject: nmdc:08884b9dcfd86b946058230f6c2ac2db +INFO:root:PassingDataObject: nmdc:baba48f801551827428e561e4a33dd1d INFO:root:PassingDataObject: nmdc:34e5d4676d88136f22f9945ee0983565 +INFO:root:PassingDataObject: nmdc:4a558dc3362b2f52b0e9cc713e2b6586 +INFO:root:PassingDataObject: nmdc:76cc722c2c35fb64a56ddac8db6af11e +INFO:root:PassingDataObject: nmdc:2fb15c746d4e2a5858e168c323d539b5 INFO:root:PassingDataObject: nmdc:4a4804e1bbb3ac585de1d3f785f3fddc +INFO:root:PassingDataObject: nmdc:1d54329d556d21ec58250ecf36b4af56 +INFO:root:PassingDataObject: nmdc:4da23a432550f971ee117685cf52f42e +INFO:root:PassingDataObject: nmdc:84450b0800a4c64890f0668eb59f4ef7 INFO:root:PassingDataObject: nmdc:ad867c6f855d944dc967760ee59a9c9c -INFO:root:PassingDataObject: nmdc:08884b9dcfd86b946058230f6c2ac2db +INFO:root:PassingDataObject: nmdc:3bc2ca72c3471843101706ab1969a040 +INFO:root:PassingDataObject: nmdc:cf53fc6df9b8f4daab45ce4b422d962f INFO:root:PassingDataObject: nmdc:5b1578d2c7704197583312e13ca71891 INFO:root:PassingDataObject: nmdc:255f62d9101f549da3403b175c917c5f -INFO:root:PassingDataObject: nmdc:2fb15c746d4e2a5858e168c323d539b5 -INFO:root:PassingDataObject: nmdc:3bc2ca72c3471843101706ab1969a040 INFO:root:PassingDataObject: nmdc:360b6234544c6a41aee3da96cc4b5d00 -INFO:root:PassingDataObject: nmdc:76cc722c2c35fb64a56ddac8db6af11e +INFO:root:PassingDataObject: nmdc:9d27c4e0111917a8b9c0d7ebd6285f54 +INFO:root:PassingDataObject: nmdc:c01dac5637ac9d32ee5e8135a3bf72d0 INFO:root:PassingDataObject: nmdc:76a512894ece0f80c448865781e92807 -INFO:root:PassingDataObject: nmdc:84450b0800a4c64890f0668eb59f4ef7 -INFO:root:PassingDataObject: nmdc:baba48f801551827428e561e4a33dd1d -INFO:root:PassingDataObject: nmdc:4a558dc3362b2f52b0e9cc713e2b6586 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208373 @@ -3837,49 +3837,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208377 INFO:root:found 1 records INFO:root:record: nmdc:4bc80f2b19100437061d229234925f77, ReadBased Analysis Activity for nmdc:mga0gf69 -INFO:root:PassingDataObject: nmdc:ede0ed26db514191367b0b58d983813d -INFO:root:PassingDataObject: nmdc:f698ef97a5f22ea749033d9ab4457b89 -INFO:root:PassingDataObject: nmdc:73f86f2c973b377285bff389e68a79e8 -INFO:root:PassingDataObject: nmdc:ee79753220c12a7c03213ca71f75b799 INFO:root:PassingDataObject: nmdc:509cbd216ab75caea93f045f313d5f99 -INFO:root:PassingDataObject: nmdc:71120d925f8faf51dd9b0042006209f8 +INFO:root:PassingDataObject: nmdc:ede0ed26db514191367b0b58d983813d INFO:root:PassingDataObject: nmdc:3ac031898fdd3ead4dfcdbcdbdf241e5 -INFO:root:PassingDataObject: nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 +INFO:root:PassingDataObject: nmdc:71120d925f8faf51dd9b0042006209f8 +INFO:root:PassingDataObject: nmdc:73f86f2c973b377285bff389e68a79e8 INFO:root:PassingDataObject: nmdc:66802c0e650c028f42b2ea50a3d91112 +INFO:root:PassingDataObject: nmdc:f698ef97a5f22ea749033d9ab4457b89 +INFO:root:PassingDataObject: nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 +INFO:root:PassingDataObject: nmdc:ee79753220c12a7c03213ca71f75b799 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208377 INFO:root:found 1 records INFO:root:record: nmdc:4bc80f2b19100437061d229234925f77, Assembly Activity for nmdc:mga0gf69 INFO:root:PassingDataObject: nmdc:be81ebec4e6ae2495cc0a35da3522db2 -INFO:root:PassingDataObject: nmdc:ba275c221b798de815490718a47eb0ec -INFO:root:PassingDataObject: nmdc:fe4273654869d5be23aaa9db11f716ba -INFO:root:PassingDataObject: nmdc:f8a32182da7e995f36abdf2c97b02ef3 INFO:root:PassingDataObject: nmdc:43af1044fb76662a430a3490042bfc6c +INFO:root:PassingDataObject: nmdc:f8a32182da7e995f36abdf2c97b02ef3 +INFO:root:PassingDataObject: nmdc:fe4273654869d5be23aaa9db11f716ba +INFO:root:PassingDataObject: nmdc:ba275c221b798de815490718a47eb0ec INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208377 INFO:root:found 1 records INFO:root:record: nmdc:4bc80f2b19100437061d229234925f77, Annotation Activity for nmdc:mga0gf69 -INFO:root:PassingDataObject: nmdc:b5eb5f43b185e28881540fa33be4ce98 -INFO:root:PassingDataObject: nmdc:fccf3e3c00f2400f254660e3c01ba355 +INFO:root:PassingDataObject: nmdc:935c1dbdef56e5f8f40d6ec00f3a847b +INFO:root:PassingDataObject: nmdc:b718bfe282dd8e17ff28ceb8c5040eb1 +INFO:root:PassingDataObject: nmdc:3b677273ef4b7ab14ec7b7d0b289a968 +INFO:root:PassingDataObject: nmdc:c95d41db153af6626cf39ae02a03c203 INFO:root:PassingDataObject: nmdc:465b8b5648d3877563e21459baa016b0 +INFO:root:PassingDataObject: nmdc:fccf3e3c00f2400f254660e3c01ba355 +INFO:root:PassingDataObject: nmdc:93e957e241ac769f5741fadea02307a2 +INFO:root:PassingDataObject: nmdc:ea605ebc42729be9809d26cb5d6884ef +INFO:root:PassingDataObject: nmdc:45314d07926b00b57a3c6f3eda67db39 INFO:root:PassingDataObject: nmdc:9d19ae5c54ad45b519e07414f816db99 INFO:root:PassingDataObject: nmdc:9054f1b8512cf07caba4104c59ee863f -INFO:root:PassingDataObject: nmdc:93e957e241ac769f5741fadea02307a2 -INFO:root:PassingDataObject: nmdc:935c1dbdef56e5f8f40d6ec00f3a847b +INFO:root:PassingDataObject: nmdc:f5a0649ad8674e9d8540e75e313cbb4a +INFO:root:PassingDataObject: nmdc:b5eb5f43b185e28881540fa33be4ce98 INFO:root:PassingDataObject: nmdc:e4514717d63c7f3f68c27c8f8c5ad699 -INFO:root:PassingDataObject: nmdc:3b677273ef4b7ab14ec7b7d0b289a968 +INFO:root:PassingDataObject: nmdc:007514d0b4166c1c7b9faab350a10150 INFO:root:PassingDataObject: nmdc:44a138ee64fdfe3c45d5e521bbe61996 +INFO:root:PassingDataObject: nmdc:7255c7479d65ab98310a7c3aa3420696 INFO:root:PassingDataObject: nmdc:62b8e5fd885b16514944ffdb03ff9529 -INFO:root:PassingDataObject: nmdc:ea605ebc42729be9809d26cb5d6884ef -INFO:root:PassingDataObject: nmdc:c95d41db153af6626cf39ae02a03c203 -INFO:root:PassingDataObject: nmdc:b718bfe282dd8e17ff28ceb8c5040eb1 INFO:root:PassingDataObject: nmdc:6f0ba8e50c4cfcafcddfe89a0c2ac093 -INFO:root:PassingDataObject: nmdc:7255c7479d65ab98310a7c3aa3420696 -INFO:root:PassingDataObject: nmdc:45314d07926b00b57a3c6f3eda67db39 -INFO:root:PassingDataObject: nmdc:f5a0649ad8674e9d8540e75e313cbb4a -INFO:root:PassingDataObject: nmdc:007514d0b4166c1c7b9faab350a10150 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208377 @@ -3898,63 +3898,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:1d2ea6cc3c17647 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, Read QC Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:03ecac4d7f4f784f702d04d14095c5e7 INFO:root:PassingDataObject: nmdc:f89cbebe67bdb294f56643e9ac620a4a +INFO:root:PassingDataObject: nmdc:03ecac4d7f4f784f702d04d14095c5e7 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, ReadBased Analysis Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:8656547aa697221a5232f049f7592306 -INFO:root:PassingDataObject: nmdc:ee0e42f3c3013512a38d3ac8f6ac815c -INFO:root:PassingDataObject: nmdc:8fa9d96b295c71a8046986782df92fd5 INFO:root:PassingDataObject: nmdc:cab593cada3a0d02f31d9f5ca3cf29cb -INFO:root:PassingDataObject: nmdc:1c5213a5e2c2d9f365334d8cf632b5b7 -INFO:root:PassingDataObject: nmdc:8abd613779718c12c609379d66886d97 +INFO:root:PassingDataObject: nmdc:8fa9d96b295c71a8046986782df92fd5 +INFO:root:PassingDataObject: nmdc:fd64b4244fd5526177002b86f841e31e INFO:root:PassingDataObject: nmdc:1441315d236b82b36e8a4c67e2969141 +INFO:root:PassingDataObject: nmdc:8656547aa697221a5232f049f7592306 +INFO:root:PassingDataObject: nmdc:8abd613779718c12c609379d66886d97 INFO:root:PassingDataObject: nmdc:463e5e53fa4c0f645a814e39ba85c329 -INFO:root:PassingDataObject: nmdc:fd64b4244fd5526177002b86f841e31e +INFO:root:PassingDataObject: nmdc:1c5213a5e2c2d9f365334d8cf632b5b7 +INFO:root:PassingDataObject: nmdc:ee0e42f3c3013512a38d3ac8f6ac815c INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, Assembly Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:6585b5e80d7700342c4aa37eec8d8805 -INFO:root:PassingDataObject: nmdc:40b2d245e0383ec17b05c63262ff9ee2 +INFO:root:PassingDataObject: nmdc:17a6139866e85d3b12b248ee384deadb INFO:root:PassingDataObject: nmdc:13a8624df8f7d9b939c9fb270a26e312 INFO:root:PassingDataObject: nmdc:06d6f1fab40b95f10f83f3884077b009 -INFO:root:PassingDataObject: nmdc:17a6139866e85d3b12b248ee384deadb +INFO:root:PassingDataObject: nmdc:40b2d245e0383ec17b05c63262ff9ee2 +INFO:root:PassingDataObject: nmdc:6585b5e80d7700342c4aa37eec8d8805 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, Annotation Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:9fb9db523b76d9ae84daee744388b183 -INFO:root:PassingDataObject: nmdc:d31b2c79108c130accbfcb00144f4ee7 -INFO:root:PassingDataObject: nmdc:846bba0f775bae1f37508fb45b69a5c4 -INFO:root:PassingDataObject: nmdc:158b63991865e3bac26da1c66c9d84b2 -INFO:root:PassingDataObject: nmdc:85c542d300bafe0e35ce31858a86cd83 +INFO:root:PassingDataObject: nmdc:2fa3e76cb50af89efc8bbe7c2b68661c +INFO:root:PassingDataObject: nmdc:26690c42049c29c4dda494d7e1d6edc8 +INFO:root:PassingDataObject: nmdc:62202109d83401ba184a7732c4e08739 +INFO:root:PassingDataObject: nmdc:ce78a344d5d9c083bbac0fd324bea056 INFO:root:PassingDataObject: nmdc:d576e6d68abc5e54ab33c28534e551f5 -INFO:root:PassingDataObject: nmdc:b120ef200b7b3602b66f62de017e5395 INFO:root:PassingDataObject: nmdc:93837b2553946f59c030ffb543f0daf9 -INFO:root:PassingDataObject: nmdc:8f65bae7b6b41c1b363f9d40461dafc7 -INFO:root:PassingDataObject: nmdc:ce78a344d5d9c083bbac0fd324bea056 -INFO:root:PassingDataObject: nmdc:26690c42049c29c4dda494d7e1d6edc8 -INFO:root:PassingDataObject: nmdc:76e2c3f1253e32b4b433db1893dbb2ec -INFO:root:PassingDataObject: nmdc:54200ad91443d8bbdde0b19b66562a06 -INFO:root:PassingDataObject: nmdc:2fa3e76cb50af89efc8bbe7c2b68661c +INFO:root:PassingDataObject: nmdc:85c542d300bafe0e35ce31858a86cd83 +INFO:root:PassingDataObject: nmdc:0d7e23f3f195ca2cebf98d4906016943 INFO:root:PassingDataObject: nmdc:9fd148401268bd82900a989c79977654 +INFO:root:PassingDataObject: nmdc:b120ef200b7b3602b66f62de017e5395 INFO:root:PassingDataObject: nmdc:b9bce92071cb4d9be68d94625948eedd -INFO:root:PassingDataObject: nmdc:0d7e23f3f195ca2cebf98d4906016943 -INFO:root:PassingDataObject: nmdc:62202109d83401ba184a7732c4e08739 +INFO:root:PassingDataObject: nmdc:d31b2c79108c130accbfcb00144f4ee7 +INFO:root:PassingDataObject: nmdc:9fb9db523b76d9ae84daee744388b183 +INFO:root:PassingDataObject: nmdc:158b63991865e3bac26da1c66c9d84b2 +INFO:root:PassingDataObject: nmdc:54200ad91443d8bbdde0b19b66562a06 +INFO:root:PassingDataObject: nmdc:8f65bae7b6b41c1b363f9d40461dafc7 INFO:root:PassingDataObject: nmdc:8a44baf85b03131edd3402d70dbad6e7 +INFO:root:PassingDataObject: nmdc:846bba0f775bae1f37508fb45b69a5c4 +INFO:root:PassingDataObject: nmdc:76e2c3f1253e32b4b433db1893dbb2ec INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, MAGs Analysis Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:379625b242d9dde68afe38cb8fdbcfc3 INFO:root:PassingDataObject: nmdc:629f314f6dfe250389601988d79909dd +INFO:root:PassingDataObject: nmdc:379625b242d9dde68afe38cb8fdbcfc3 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208378 @@ -3966,63 +3966,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7b093e525bf7741 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, Read QC Activity for nmdc:mga01972 -INFO:root:PassingDataObject: nmdc:7d72a04d4682974fd3ea7fa4a4c1501f INFO:root:PassingDataObject: nmdc:cc7885ab3d8c8970aa3e95a661a18928 +INFO:root:PassingDataObject: nmdc:7d72a04d4682974fd3ea7fa4a4c1501f INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, ReadBased Analysis Activity for nmdc:mga01972 -INFO:root:PassingDataObject: nmdc:5b34fe8f176d00ad621e343cee280407 -INFO:root:PassingDataObject: nmdc:a3ee040f811c7a64e1fbe391de379be3 -INFO:root:PassingDataObject: nmdc:d4f5a4872fcf73915531b24326d777e6 -INFO:root:PassingDataObject: nmdc:82a5192e01f389d0ec580bd9c6cd93dc -INFO:root:PassingDataObject: nmdc:44f324c080104c4b837dfff2c618dd71 -INFO:root:PassingDataObject: nmdc:b791766971652f65ffb1ac027441da43 INFO:root:PassingDataObject: nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 INFO:root:PassingDataObject: nmdc:ae0cf9645216f4b684949ef778a2f82d +INFO:root:PassingDataObject: nmdc:82a5192e01f389d0ec580bd9c6cd93dc INFO:root:PassingDataObject: nmdc:b067154c72ddb59c09db18ecc24a01f4 +INFO:root:PassingDataObject: nmdc:5b34fe8f176d00ad621e343cee280407 +INFO:root:PassingDataObject: nmdc:b791766971652f65ffb1ac027441da43 +INFO:root:PassingDataObject: nmdc:44f324c080104c4b837dfff2c618dd71 +INFO:root:PassingDataObject: nmdc:a3ee040f811c7a64e1fbe391de379be3 +INFO:root:PassingDataObject: nmdc:d4f5a4872fcf73915531b24326d777e6 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, Assembly Activity for nmdc:mga01972 -INFO:root:PassingDataObject: nmdc:adabe10644ac8372d0e744d87bff893e -INFO:root:PassingDataObject: nmdc:55ba5ffe4f656ec1259f19f10515f3ad INFO:root:PassingDataObject: nmdc:c6a3dbe8001532a74a4085c9070d472f -INFO:root:PassingDataObject: nmdc:24922b1bf381227856efb374b3b1b91a INFO:root:PassingDataObject: nmdc:e2241b87bfda9ceb529818473447288f +INFO:root:PassingDataObject: nmdc:adabe10644ac8372d0e744d87bff893e +INFO:root:PassingDataObject: nmdc:24922b1bf381227856efb374b3b1b91a +INFO:root:PassingDataObject: nmdc:55ba5ffe4f656ec1259f19f10515f3ad INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, Annotation Activity for nmdc:mga01972 -INFO:root:PassingDataObject: nmdc:0d12f7425f45b6f0fffb1d4c20358931 -INFO:root:PassingDataObject: nmdc:74eedd956bd111c2397d62e384fd12f6 -INFO:root:PassingDataObject: nmdc:c593cc4c68034516d0c48fea6ddb11db -INFO:root:PassingDataObject: nmdc:51cf1ff5aad44b74144b259327ac53d8 -INFO:root:PassingDataObject: nmdc:517cf1ed491520c6287b98d319b678f0 INFO:root:PassingDataObject: nmdc:03bd2c3851b517f8a0d7119ef0dc27bd -INFO:root:PassingDataObject: nmdc:52db1647730573154b6d458913e9e352 -INFO:root:PassingDataObject: nmdc:f93b12ab4a8d50d1e128f9913c192e55 -INFO:root:PassingDataObject: nmdc:fd66762beb73e76a6f24cce894e91efc -INFO:root:PassingDataObject: nmdc:39385c841825c8b64bc852ad4b4d76c2 +INFO:root:PassingDataObject: nmdc:0498814aced65245e90bcc1caf65969c +INFO:root:PassingDataObject: nmdc:87903dfc4a582004594daaabe4ddea58 INFO:root:PassingDataObject: nmdc:9c4656ca2bad47f1af0ba52b86bb20c4 -INFO:root:PassingDataObject: nmdc:7ec701d7ba7ccd10345e3316e05afa58 -INFO:root:PassingDataObject: nmdc:2b324dc2b31628ac54f8bca27e24a04e -INFO:root:PassingDataObject: nmdc:22a95490206bce4c760f06c93adf7b53 +INFO:root:PassingDataObject: nmdc:c593cc4c68034516d0c48fea6ddb11db INFO:root:PassingDataObject: nmdc:7b31d44d0cf70a5fdd248518d12eb0c0 +INFO:root:PassingDataObject: nmdc:7ec701d7ba7ccd10345e3316e05afa58 +INFO:root:PassingDataObject: nmdc:52db1647730573154b6d458913e9e352 INFO:root:PassingDataObject: nmdc:6a3e16c34cbf86f0aef81f21dbd8fa4d -INFO:root:PassingDataObject: nmdc:87903dfc4a582004594daaabe4ddea58 -INFO:root:PassingDataObject: nmdc:0498814aced65245e90bcc1caf65969c +INFO:root:PassingDataObject: nmdc:39385c841825c8b64bc852ad4b4d76c2 +INFO:root:PassingDataObject: nmdc:0d12f7425f45b6f0fffb1d4c20358931 +INFO:root:PassingDataObject: nmdc:f93b12ab4a8d50d1e128f9913c192e55 +INFO:root:PassingDataObject: nmdc:22a95490206bce4c760f06c93adf7b53 INFO:root:PassingDataObject: nmdc:48268f58e361b7c14e3a8e17ad829c51 +INFO:root:PassingDataObject: nmdc:74eedd956bd111c2397d62e384fd12f6 +INFO:root:PassingDataObject: nmdc:2b324dc2b31628ac54f8bca27e24a04e +INFO:root:PassingDataObject: nmdc:517cf1ed491520c6287b98d319b678f0 +INFO:root:PassingDataObject: nmdc:fd66762beb73e76a6f24cce894e91efc +INFO:root:PassingDataObject: nmdc:51cf1ff5aad44b74144b259327ac53d8 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, MAGs Analysis Activity for nmdc:mga01972 -INFO:root:PassingDataObject: nmdc:2d9dfe30c181834c010329a495ca0f4c INFO:root:PassingDataObject: nmdc:99061b9f54afdddfbeba1d32362c6237 +INFO:root:PassingDataObject: nmdc:2d9dfe30c181834c010329a495ca0f4c INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208382 @@ -4041,49 +4041,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208379 INFO:root:found 1 records INFO:root:record: nmdc:10f32f6b190a35a62306be4e42a4c625, ReadBased Analysis Activity for nmdc:mga04k45 -INFO:root:PassingDataObject: nmdc:fd9075271692c37b143498df3e047158 -INFO:root:PassingDataObject: nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 -INFO:root:PassingDataObject: nmdc:79ea8eb051f7bf1a75a50ed608b09a6c -INFO:root:PassingDataObject: nmdc:bfeff910dd78b70e5d591232a8239f56 INFO:root:PassingDataObject: nmdc:44ac21b09dea0484ded48c2644ab40d9 -INFO:root:PassingDataObject: nmdc:483399641738a013f3e65c63b8a9e643 -INFO:root:PassingDataObject: nmdc:2116369b3394b4d51977f00653798c91 INFO:root:PassingDataObject: nmdc:ec244af617bdd43044a0636840ae0ed9 +INFO:root:PassingDataObject: nmdc:483399641738a013f3e65c63b8a9e643 +INFO:root:PassingDataObject: nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 +INFO:root:PassingDataObject: nmdc:fd9075271692c37b143498df3e047158 +INFO:root:PassingDataObject: nmdc:79ea8eb051f7bf1a75a50ed608b09a6c INFO:root:PassingDataObject: nmdc:7351615ec85d3e089ab11e6a4b476808 +INFO:root:PassingDataObject: nmdc:2116369b3394b4d51977f00653798c91 +INFO:root:PassingDataObject: nmdc:bfeff910dd78b70e5d591232a8239f56 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208379 INFO:root:found 1 records INFO:root:record: nmdc:10f32f6b190a35a62306be4e42a4c625, Assembly Activity for nmdc:mga04k45 INFO:root:PassingDataObject: nmdc:2e4e9b52a43b6885985efb30ee795b23 -INFO:root:PassingDataObject: nmdc:3df51a0a6d09862eeb7e32afa8d093ee INFO:root:PassingDataObject: nmdc:da28bc0afe95a4879ce8bee55f716bb2 INFO:root:PassingDataObject: nmdc:3ad61e488202766a4970fe3ec0b7579e INFO:root:PassingDataObject: nmdc:6e131d6d178a532582a0a7577c5fdf9a +INFO:root:PassingDataObject: nmdc:3df51a0a6d09862eeb7e32afa8d093ee INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208379 INFO:root:found 1 records INFO:root:record: nmdc:10f32f6b190a35a62306be4e42a4c625, Annotation Activity for nmdc:mga04k45 -INFO:root:PassingDataObject: nmdc:24bcd84b56ffff6df1416d5899fb5f6d -INFO:root:PassingDataObject: nmdc:9c83c1299e168766498fe6d4092f66a4 +INFO:root:PassingDataObject: nmdc:ac70c5b8c890b5551421ad2ac73ec0b2 INFO:root:PassingDataObject: nmdc:7af497de6152805d1149ba314be7944a -INFO:root:PassingDataObject: nmdc:1fb0f5845db5a441dfbc7f9ce7f6b07c -INFO:root:PassingDataObject: nmdc:d0e94af2c4ea57e1084b7d947ad8ad56 -INFO:root:PassingDataObject: nmdc:533de1475f3f8bf3cc10d1f33395a1f1 INFO:root:PassingDataObject: nmdc:7ef08a1de281caf5a4f22266b51418e2 -INFO:root:PassingDataObject: nmdc:47a224d768f344d4ec6c9fc0939bcc61 -INFO:root:PassingDataObject: nmdc:ac70c5b8c890b5551421ad2ac73ec0b2 -INFO:root:PassingDataObject: nmdc:ad59422cc73e5776248c63c39a22dbf3 -INFO:root:PassingDataObject: nmdc:497bb5579cc72c67abcf90713744489f INFO:root:PassingDataObject: nmdc:35b525eebf9ce3314a55994b3eed1d8f INFO:root:PassingDataObject: nmdc:bd4284dc711ef9b5aa5b5473f4450ce8 -INFO:root:PassingDataObject: nmdc:bfaa51a9c5820c02f91a92c73dae603c +INFO:root:PassingDataObject: nmdc:d0e94af2c4ea57e1084b7d947ad8ad56 +INFO:root:PassingDataObject: nmdc:497bb5579cc72c67abcf90713744489f +INFO:root:PassingDataObject: nmdc:10e7b612dc57253c4554d63a28db1c21 +INFO:root:PassingDataObject: nmdc:24bcd84b56ffff6df1416d5899fb5f6d +INFO:root:PassingDataObject: nmdc:a3dc034404ea19889350581866b4d2f9 +INFO:root:PassingDataObject: nmdc:47a224d768f344d4ec6c9fc0939bcc61 INFO:root:PassingDataObject: nmdc:8c29d0b328cb4db63a9f93dd56feb093 +INFO:root:PassingDataObject: nmdc:9c83c1299e168766498fe6d4092f66a4 INFO:root:PassingDataObject: nmdc:c15687dfbf3ea7ad49a3f4f94c73a3ff -INFO:root:PassingDataObject: nmdc:a3dc034404ea19889350581866b4d2f9 INFO:root:PassingDataObject: nmdc:d9ddd95eb0ebfe0a69a8920ca7aa3eea -INFO:root:PassingDataObject: nmdc:10e7b612dc57253c4554d63a28db1c21 +INFO:root:PassingDataObject: nmdc:ad59422cc73e5776248c63c39a22dbf3 +INFO:root:PassingDataObject: nmdc:1fb0f5845db5a441dfbc7f9ce7f6b07c +INFO:root:PassingDataObject: nmdc:533de1475f3f8bf3cc10d1f33395a1f1 +INFO:root:PassingDataObject: nmdc:bfaa51a9c5820c02f91a92c73dae603c INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208379 @@ -4102,56 +4102,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d08893db578667f INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, Read QC Activity for nmdc:mga0kh66 -INFO:root:PassingDataObject: nmdc:9ecfcc475d9f8f4137fe20aecd120eb6 INFO:root:PassingDataObject: nmdc:5bc67a2b476b96593eed2aecfe758e7d +INFO:root:PassingDataObject: nmdc:9ecfcc475d9f8f4137fe20aecd120eb6 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, ReadBased Analysis Activity for nmdc:mga0kh66 -INFO:root:PassingDataObject: nmdc:bf74bc0f07ececef23e455da7229f7d2 -INFO:root:PassingDataObject: nmdc:989ad96a68d6a8210fd8e6feeffd4337 -INFO:root:PassingDataObject: nmdc:ebfe831bbab778e828dea284f6c2db17 -INFO:root:PassingDataObject: nmdc:a214e38f694df694b742558e0131f0c7 INFO:root:PassingDataObject: nmdc:7742daba0ff3d113ba8bb6b101acf491 +INFO:root:PassingDataObject: nmdc:756f3c11ef403ba8f1a240932c5fa284 +INFO:root:PassingDataObject: nmdc:d6a6066ca1f7c854ce204fa52286b618 INFO:root:PassingDataObject: nmdc:60270073bdb3dd9c3c5360fcf3b3c5c4 +INFO:root:PassingDataObject: nmdc:ebfe831bbab778e828dea284f6c2db17 INFO:root:PassingDataObject: nmdc:c51a18ac682f7ee4feb2af515f611ba4 -INFO:root:PassingDataObject: nmdc:d6a6066ca1f7c854ce204fa52286b618 -INFO:root:PassingDataObject: nmdc:756f3c11ef403ba8f1a240932c5fa284 +INFO:root:PassingDataObject: nmdc:a214e38f694df694b742558e0131f0c7 +INFO:root:PassingDataObject: nmdc:bf74bc0f07ececef23e455da7229f7d2 +INFO:root:PassingDataObject: nmdc:989ad96a68d6a8210fd8e6feeffd4337 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, Assembly Activity for nmdc:mga0kh66 +INFO:root:PassingDataObject: nmdc:ec95c16ace60dd3c175ab95255e77d05 INFO:root:PassingDataObject: nmdc:5e6cdd777519107821142fa7be2735c2 +INFO:root:PassingDataObject: nmdc:860417fb127246c5b1ffa38c0a3f3401 INFO:root:PassingDataObject: nmdc:07718de6c41dec7b2122cc6bfa6437e0 INFO:root:PassingDataObject: nmdc:e587d98e7e01661b57c1a67084d2a84e -INFO:root:PassingDataObject: nmdc:860417fb127246c5b1ffa38c0a3f3401 -INFO:root:PassingDataObject: nmdc:ec95c16ace60dd3c175ab95255e77d05 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, Annotation Activity for nmdc:mga0kh66 -INFO:root:PassingDataObject: nmdc:a8d3be278a439a395ca7515c63da4088 -INFO:root:PassingDataObject: nmdc:d04bb69c0e749a94a98020e134dddff1 -INFO:root:PassingDataObject: nmdc:455ec78cddc57344d2b33f06220e4b01 -INFO:root:PassingDataObject: nmdc:71989d53f119804ed780c8a738092bec -INFO:root:PassingDataObject: nmdc:1cb3147a437ed92c93781b77294622c8 -INFO:root:PassingDataObject: nmdc:9bf2f5f1ff1926278cf5a09b6680df49 +INFO:root:PassingDataObject: nmdc:fad09131d20ac5cbb6dfab585d631cc7 INFO:root:PassingDataObject: nmdc:26c2eb2b8d25b4e3e2df6337c44f5fdb +INFO:root:PassingDataObject: nmdc:a8d3be278a439a395ca7515c63da4088 +INFO:root:PassingDataObject: nmdc:11060d59ee78d511a550c21e12f8da70 INFO:root:PassingDataObject: nmdc:4d3b18b3f6be21cb219e9a272f9baa49 -INFO:root:PassingDataObject: nmdc:fad09131d20ac5cbb6dfab585d631cc7 -INFO:root:PassingDataObject: nmdc:e1d33e5275ffd8359bac51f0665a0e8c -INFO:root:PassingDataObject: nmdc:7408ddbacaca7b9f7ddae727e41f4298 INFO:root:PassingDataObject: nmdc:668f056e29d4cb076a5a89adda2a830d -INFO:root:PassingDataObject: nmdc:c4759fbea589d4f22a671a1e854f8cc8 INFO:root:PassingDataObject: nmdc:cc4860bda2b70251ea7d4e61dd597792 +INFO:root:PassingDataObject: nmdc:7408ddbacaca7b9f7ddae727e41f4298 +INFO:root:PassingDataObject: nmdc:d04bb69c0e749a94a98020e134dddff1 +INFO:root:PassingDataObject: nmdc:c07d9a1b5fc34577d8995112a509d13d INFO:root:PassingDataObject: nmdc:8a39c9782810eff3b3038cef75a67f03 -INFO:root:PassingDataObject: nmdc:11060d59ee78d511a550c21e12f8da70 +INFO:root:PassingDataObject: nmdc:9bf2f5f1ff1926278cf5a09b6680df49 INFO:root:PassingDataObject: nmdc:e37c2b67c42e5fe809fea33977e7766e -INFO:root:PassingDataObject: nmdc:c07d9a1b5fc34577d8995112a509d13d +INFO:root:PassingDataObject: nmdc:e1d33e5275ffd8359bac51f0665a0e8c +INFO:root:PassingDataObject: nmdc:71989d53f119804ed780c8a738092bec +INFO:root:PassingDataObject: nmdc:c4759fbea589d4f22a671a1e854f8cc8 +INFO:root:PassingDataObject: nmdc:455ec78cddc57344d2b33f06220e4b01 INFO:root:PassingDataObject: nmdc:2a92a4d1e98cfd43cef89048cc4cea11 +INFO:root:PassingDataObject: nmdc:1cb3147a437ed92c93781b77294622c8 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208381 @@ -4177,56 +4177,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, ReadBased Analysis Activity for nmdc:mga0yv47 -INFO:root:PassingDataObject: nmdc:91c860160ee3a88b2230d5de3909feb3 -INFO:root:PassingDataObject: nmdc:f21b0efef9933cd29d7e8c8c80713a17 -INFO:root:PassingDataObject: nmdc:2cb788f136a41bb370ed607e380b1277 +INFO:root:PassingDataObject: nmdc:b541e0ffe85bff612b7c3271a1625109 INFO:root:PassingDataObject: nmdc:c8a828420c66f32138f3151e12c93cf4 +INFO:root:PassingDataObject: nmdc:2cb788f136a41bb370ed607e380b1277 +INFO:root:PassingDataObject: nmdc:f5b303204f5abfcef0764cb9a9fe6960 +INFO:root:PassingDataObject: nmdc:f21b0efef9933cd29d7e8c8c80713a17 INFO:root:PassingDataObject: nmdc:8d5fadb6a2a348506d17c489c516dd1f INFO:root:PassingDataObject: nmdc:23836128606562e0a2337fbca8b8f21d +INFO:root:PassingDataObject: nmdc:91c860160ee3a88b2230d5de3909feb3 INFO:root:PassingDataObject: nmdc:2c462c007af3a4df4a37f416712c0f93 -INFO:root:PassingDataObject: nmdc:f5b303204f5abfcef0764cb9a9fe6960 -INFO:root:PassingDataObject: nmdc:b541e0ffe85bff612b7c3271a1625109 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, Assembly Activity for nmdc:mga0yv47 +INFO:root:PassingDataObject: nmdc:056937db3bb74e6e62cf4adf5a8a52fa +INFO:root:PassingDataObject: nmdc:91fc24b40783287114877002c00d382a INFO:root:PassingDataObject: nmdc:6b73e09e3e8bdc0890dca90c0a92a140 INFO:root:PassingDataObject: nmdc:8430e331eb8914436cc0473c95d1c3f5 -INFO:root:PassingDataObject: nmdc:056937db3bb74e6e62cf4adf5a8a52fa INFO:root:PassingDataObject: nmdc:46a01c1d28aac5bd419e33c63ad4a42e -INFO:root:PassingDataObject: nmdc:91fc24b40783287114877002c00d382a INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, Annotation Activity for nmdc:mga0yv47 -INFO:root:PassingDataObject: nmdc:5cedd14e45e2339a29c1911c376bee59 -INFO:root:PassingDataObject: nmdc:3d615ed43449911d496616a304ba4601 -INFO:root:PassingDataObject: nmdc:f9b9e480f9f5c63bdc44deebab4fc9ff INFO:root:PassingDataObject: nmdc:e2d61d768d76e7d5d581a01160694494 -INFO:root:PassingDataObject: nmdc:42c0c32bd026bdc62af8873aa00883c3 -INFO:root:PassingDataObject: nmdc:121509a5382747f05911ea42d3270884 -INFO:root:PassingDataObject: nmdc:39feae032125d565de59050cf82dac1b INFO:root:PassingDataObject: nmdc:72abe0df3ce4deb32147cd7da9632fc6 INFO:root:PassingDataObject: nmdc:08f68ccdf85d7c1b90a9562a9accdb60 +INFO:root:PassingDataObject: nmdc:81a77ac38063376e5601b123abd0acf9 +INFO:root:PassingDataObject: nmdc:be23b332475b60dadc6e54d29248efa1 +INFO:root:PassingDataObject: nmdc:b08ddb4bd80f25099e9cd09141e65e7a +INFO:root:PassingDataObject: nmdc:3d615ed43449911d496616a304ba4601 INFO:root:PassingDataObject: nmdc:268a6dcb32d83c0687c06865cd8dfa62 -INFO:root:PassingDataObject: nmdc:c1ac32c445d7e73d35c0837f615800ba +INFO:root:PassingDataObject: nmdc:52dda09fe6b211dd4051248a56d67a2d +INFO:root:PassingDataObject: nmdc:121509a5382747f05911ea42d3270884 +INFO:root:PassingDataObject: nmdc:f9b9e480f9f5c63bdc44deebab4fc9ff INFO:root:PassingDataObject: nmdc:d38e2e0ec0cf53df8f69bd4066a08adc +INFO:root:PassingDataObject: nmdc:28e72923c189493c393aee8749f6026c +INFO:root:PassingDataObject: nmdc:42c0c32bd026bdc62af8873aa00883c3 +INFO:root:PassingDataObject: nmdc:5cedd14e45e2339a29c1911c376bee59 INFO:root:PassingDataObject: nmdc:4361a38f030ba8fd7538dbc74af8e2b2 INFO:root:PassingDataObject: nmdc:82ad058b7d703681f55467942c57343a -INFO:root:PassingDataObject: nmdc:52dda09fe6b211dd4051248a56d67a2d -INFO:root:PassingDataObject: nmdc:81a77ac38063376e5601b123abd0acf9 -INFO:root:PassingDataObject: nmdc:28e72923c189493c393aee8749f6026c -INFO:root:PassingDataObject: nmdc:b08ddb4bd80f25099e9cd09141e65e7a -INFO:root:PassingDataObject: nmdc:be23b332475b60dadc6e54d29248efa1 +INFO:root:PassingDataObject: nmdc:c1ac32c445d7e73d35c0837f615800ba +INFO:root:PassingDataObject: nmdc:39feae032125d565de59050cf82dac1b INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, MAGs Analysis Activity for nmdc:mga0yv47 -INFO:root:PassingDataObject: nmdc:8f583c673d2d4468471cf88dbc82cdf1 INFO:root:PassingDataObject: nmdc:ca3feca5dd86df3252b788719a344ee1 +INFO:root:PassingDataObject: nmdc:8f583c673d2d4468471cf88dbc82cdf1 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213331 @@ -4238,55 +4238,55 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:908fe1703358c81 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, Read QC Activity for nmdc:mga0mm58 -INFO:root:PassingDataObject: nmdc:400551f61fad6febea1245f3696f84c9 INFO:root:PassingDataObject: nmdc:ca8d24dea85bb47eb3982e32898257ce +INFO:root:PassingDataObject: nmdc:400551f61fad6febea1245f3696f84c9 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, ReadBased Analysis Activity for nmdc:mga0mm58 -INFO:root:PassingDataObject: nmdc:773664b28b1c88402c02db092f267be7 -INFO:root:PassingDataObject: nmdc:dd8c8bc59a700e644e19295f4613f8a5 -INFO:root:PassingDataObject: nmdc:fce7444c99f2d8006c798d798d4af9f8 INFO:root:PassingDataObject: nmdc:db917434e3a8a394c929713367b6d60f +INFO:root:PassingDataObject: nmdc:dd8c8bc59a700e644e19295f4613f8a5 +INFO:root:PassingDataObject: nmdc:e34462c20683f3942a0b44e14b86f099 INFO:root:PassingDataObject: nmdc:be61a2806915bce88f8d0c1f74e69e28 -INFO:root:PassingDataObject: nmdc:878f1d1e4df4322d2832395aa2a0e8d3 +INFO:root:PassingDataObject: nmdc:fce7444c99f2d8006c798d798d4af9f8 +INFO:root:PassingDataObject: nmdc:773664b28b1c88402c02db092f267be7 INFO:root:PassingDataObject: nmdc:835ffe62701fda30cbe2d7fa548f2388 -INFO:root:PassingDataObject: nmdc:e34462c20683f3942a0b44e14b86f099 +INFO:root:PassingDataObject: nmdc:878f1d1e4df4322d2832395aa2a0e8d3 INFO:root:PassingDataObject: nmdc:b7b2169beb649e04645f638a1e2cb17b INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, Assembly Activity for nmdc:mga0mm58 -INFO:root:PassingDataObject: nmdc:a8e0351dd3d3290b94332377fd992ee9 -INFO:root:PassingDataObject: nmdc:e866c0e7b0eb54535e4476dfdad24b7c -INFO:root:PassingDataObject: nmdc:885c30dd862ef3fc4926973fb4b01c8b -INFO:root:PassingDataObject: nmdc:452a9abe77f69bdf383fd43c1172a40e INFO:root:PassingDataObject: nmdc:082e91c0f9dbfb8be4545a068b856fc2 +INFO:root:PassingDataObject: nmdc:452a9abe77f69bdf383fd43c1172a40e +INFO:root:PassingDataObject: nmdc:885c30dd862ef3fc4926973fb4b01c8b +INFO:root:PassingDataObject: nmdc:e866c0e7b0eb54535e4476dfdad24b7c +INFO:root:PassingDataObject: nmdc:a8e0351dd3d3290b94332377fd992ee9 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, Annotation Activity for nmdc:mga0mm58 -INFO:root:PassingDataObject: nmdc:9ca8374dea8b3e3f1d436dd3cafae0bf -INFO:root:PassingDataObject: nmdc:1e0eb18e6a4ce97b8f4a4b6d819f31a1 -INFO:root:PassingDataObject: nmdc:3749ef977c8f74b5735cb9e0e9792ad0 -INFO:root:PassingDataObject: nmdc:d6394046f936fe9020ebfb59fbf13e54 -INFO:root:PassingDataObject: nmdc:1dd277c87901d7f1d575ffe464d61450 +INFO:root:PassingDataObject: nmdc:19f8eaaaae9e96fe0a5005c7fd47a166 +INFO:root:PassingDataObject: nmdc:f726aa336fb8fe611c62e3a81cd7195c +INFO:root:PassingDataObject: nmdc:41d3ec26d013eeb575dee6207b6f1b86 INFO:root:PassingDataObject: nmdc:ed6069307f41f569574cfa7c57d01038 -INFO:root:PassingDataObject: nmdc:d74a13db31f56e47f40423aba6f781cd +INFO:root:PassingDataObject: nmdc:1dd277c87901d7f1d575ffe464d61450 INFO:root:PassingDataObject: nmdc:671280443e76ae0f797845a4f166414a +INFO:root:PassingDataObject: nmdc:d718a7f66f3117f37bbc59e571d818c8 INFO:root:PassingDataObject: nmdc:ce9c9a0f654fb47f222bfb6b646265c5 -INFO:root:PassingDataObject: nmdc:19f8eaaaae9e96fe0a5005c7fd47a166 -INFO:root:PassingDataObject: nmdc:815d12b45c5cc799bde03c2848591021 -INFO:root:PassingDataObject: nmdc:f726aa336fb8fe611c62e3a81cd7195c +INFO:root:PassingDataObject: nmdc:d74a13db31f56e47f40423aba6f781cd +INFO:root:PassingDataObject: nmdc:3749ef977c8f74b5735cb9e0e9792ad0 +INFO:root:PassingDataObject: nmdc:9ca8374dea8b3e3f1d436dd3cafae0bf INFO:root:PassingDataObject: nmdc:52d50ee90219e2af37fc5c39cc0fa915 +INFO:root:PassingDataObject: nmdc:d6394046f936fe9020ebfb59fbf13e54 +INFO:root:PassingDataObject: nmdc:9c3aa83342ea8b06c93c7ed495f146df INFO:root:PassingDataObject: nmdc:d583142a07608226f87d740c8d08f2bd +INFO:root:PassingDataObject: nmdc:1e0eb18e6a4ce97b8f4a4b6d819f31a1 +INFO:root:PassingDataObject: nmdc:815d12b45c5cc799bde03c2848591021 INFO:root:PassingDataObject: nmdc:d4190c6662d43be98e12be496523b3c7 -INFO:root:PassingDataObject: nmdc:d718a7f66f3117f37bbc59e571d818c8 -INFO:root:PassingDataObject: nmdc:41d3ec26d013eeb575dee6207b6f1b86 -INFO:root:PassingDataObject: nmdc:9c3aa83342ea8b06c93c7ed495f146df INFO:root:PassingDataObject: nmdc:b70bbcf2c37bd2633a8c62f57acc3c95 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 @@ -4314,48 +4314,48 @@ INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213333 INFO:root:found 1 records INFO:root:record: nmdc:911f1a5b4bc13cf661631e0ad96bc802, ReadBased Analysis Activity for nmdc:mga0rg74 INFO:root:PassingDataObject: nmdc:ac37e5f91352b5d004b6499f1c933e81 -INFO:root:PassingDataObject: nmdc:d5e7cce38a745ddb3733e9070f291f30 +INFO:root:PassingDataObject: nmdc:075f37069b66a9e1354572fc64b64d78 +INFO:root:PassingDataObject: nmdc:e91e296312f9b97c3e43d9ec437662db INFO:root:PassingDataObject: nmdc:08cc61d8fede0602cf5b4e0c902e9697 -INFO:root:PassingDataObject: nmdc:3d8efa2984296797b98d31258db2c1e9 INFO:root:PassingDataObject: nmdc:ea876b541cf655002daba6a3b6f19ae4 -INFO:root:PassingDataObject: nmdc:92d6845b03d1c9e06c77d247fd7a59c3 -INFO:root:PassingDataObject: nmdc:075f37069b66a9e1354572fc64b64d78 INFO:root:PassingDataObject: nmdc:0008e32dd1b90922c3335ea7e050f9e7 -INFO:root:PassingDataObject: nmdc:e91e296312f9b97c3e43d9ec437662db +INFO:root:PassingDataObject: nmdc:3d8efa2984296797b98d31258db2c1e9 +INFO:root:PassingDataObject: nmdc:92d6845b03d1c9e06c77d247fd7a59c3 +INFO:root:PassingDataObject: nmdc:d5e7cce38a745ddb3733e9070f291f30 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213333 INFO:root:found 1 records INFO:root:record: nmdc:911f1a5b4bc13cf661631e0ad96bc802, Assembly Activity for nmdc:mga0rg74 -INFO:root:PassingDataObject: nmdc:0d7c3cfa223d081f55f047390a81b450 -INFO:root:PassingDataObject: nmdc:77b1c42efa2b0e793eb3c90a09a53a27 INFO:root:PassingDataObject: nmdc:9db3f494f3373d5893a1fde528a08f1b -INFO:root:PassingDataObject: nmdc:4b07be82e2b87dc824fc32f48f1b9376 INFO:root:PassingDataObject: nmdc:d94c3d4aced63619e6d7ce617f60ede0 +INFO:root:PassingDataObject: nmdc:77b1c42efa2b0e793eb3c90a09a53a27 +INFO:root:PassingDataObject: nmdc:4b07be82e2b87dc824fc32f48f1b9376 +INFO:root:PassingDataObject: nmdc:0d7c3cfa223d081f55f047390a81b450 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213333 INFO:root:found 1 records INFO:root:record: nmdc:911f1a5b4bc13cf661631e0ad96bc802, Annotation Activity for nmdc:mga0rg74 -INFO:root:PassingDataObject: nmdc:353704959bb65d7317ad9d5255f0e9ec -INFO:root:PassingDataObject: nmdc:beac587692b76481c1ce4fe60da68168 -INFO:root:PassingDataObject: nmdc:8168bdb3c597dcdeb0aa8433f9ff22b2 +INFO:root:PassingDataObject: nmdc:ed0f2f979b41595fb28f9a9286908771 +INFO:root:PassingDataObject: nmdc:62e1d2c55ba70885277fb29e57ebe14e +INFO:root:PassingDataObject: nmdc:43c2b2486136a7619bc02a4d3ed5e2bd INFO:root:PassingDataObject: nmdc:302af4932298e6b2b66745df4e509434 -INFO:root:PassingDataObject: nmdc:517c3e5c49607166372f1de009b5d7b5 +INFO:root:PassingDataObject: nmdc:7e0d9984b9b5e6d8d0cec137d50505c9 INFO:root:PassingDataObject: nmdc:81f074596944d4110a792c84dfa1dda5 INFO:root:PassingDataObject: nmdc:dcee988f5f02d73c250f0152aca5f0cb -INFO:root:PassingDataObject: nmdc:79f209a68e83c56a7740a9c5dd570e1a -INFO:root:PassingDataObject: nmdc:b9231fd1689478c81739aa9b3d9dd675 -INFO:root:PassingDataObject: nmdc:77913bbf7a8cea9807d38bd07f2f5159 -INFO:root:PassingDataObject: nmdc:e564ac0e23452a8091d9bc8cc34028e9 INFO:root:PassingDataObject: nmdc:b50ba4b67a5c4093ab736076def3fb39 +INFO:root:PassingDataObject: nmdc:517c3e5c49607166372f1de009b5d7b5 +INFO:root:PassingDataObject: nmdc:e564ac0e23452a8091d9bc8cc34028e9 +INFO:root:PassingDataObject: nmdc:77913bbf7a8cea9807d38bd07f2f5159 +INFO:root:PassingDataObject: nmdc:8168bdb3c597dcdeb0aa8433f9ff22b2 INFO:root:PassingDataObject: nmdc:954f9c92f884c175e54373cc60e2b64f INFO:root:PassingDataObject: nmdc:406bf4b4f6b592cc9fac92459e384687 -INFO:root:PassingDataObject: nmdc:ed0f2f979b41595fb28f9a9286908771 -INFO:root:PassingDataObject: nmdc:43c2b2486136a7619bc02a4d3ed5e2bd -INFO:root:PassingDataObject: nmdc:62e1d2c55ba70885277fb29e57ebe14e -INFO:root:PassingDataObject: nmdc:7e0d9984b9b5e6d8d0cec137d50505c9 +INFO:root:PassingDataObject: nmdc:79f209a68e83c56a7740a9c5dd570e1a +INFO:root:PassingDataObject: nmdc:353704959bb65d7317ad9d5255f0e9ec INFO:root:PassingDataObject: nmdc:d68af3852125c050997d4d1396104674 +INFO:root:PassingDataObject: nmdc:beac587692b76481c1ce4fe60da68168 +INFO:root:PassingDataObject: nmdc:b9231fd1689478c81739aa9b3d9dd675 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213333 @@ -4374,63 +4374,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:da44ab401932bc1 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, Read QC Activity for nmdc:mga0bm49 -INFO:root:PassingDataObject: nmdc:be4348289be81f991af1486ad6e5dd51 INFO:root:PassingDataObject: nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 +INFO:root:PassingDataObject: nmdc:be4348289be81f991af1486ad6e5dd51 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, ReadBased Analysis Activity for nmdc:mga0bm49 -INFO:root:PassingDataObject: nmdc:09e02f5247faaa726b561cf782922340 -INFO:root:PassingDataObject: nmdc:4f331f13976704fc41572eed8e6cc2d0 -INFO:root:PassingDataObject: nmdc:341eb58042a151931224a0839280c7dc -INFO:root:PassingDataObject: nmdc:705c914a44264725bd5ad30e74a4919a INFO:root:PassingDataObject: nmdc:7d33a4811210762b1928c5c17f376c3f -INFO:root:PassingDataObject: nmdc:707e4377811aca0e7d02133092a89edd -INFO:root:PassingDataObject: nmdc:4266fbced36d9ee69e63c4eaacd28665 +INFO:root:PassingDataObject: nmdc:705c914a44264725bd5ad30e74a4919a INFO:root:PassingDataObject: nmdc:a2565349a1e98abb96b8da88ee108b55 +INFO:root:PassingDataObject: nmdc:4f331f13976704fc41572eed8e6cc2d0 +INFO:root:PassingDataObject: nmdc:707e4377811aca0e7d02133092a89edd +INFO:root:PassingDataObject: nmdc:341eb58042a151931224a0839280c7dc INFO:root:PassingDataObject: nmdc:b9148a049a0e97bea5e85c37de00d674 +INFO:root:PassingDataObject: nmdc:09e02f5247faaa726b561cf782922340 +INFO:root:PassingDataObject: nmdc:4266fbced36d9ee69e63c4eaacd28665 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, Assembly Activity for nmdc:mga0bm49 +INFO:root:PassingDataObject: nmdc:23f5a0946351e2f19e3645314176dd67 INFO:root:PassingDataObject: nmdc:1ac6a3066bd295bbee2cc8a822c3ebe8 +INFO:root:PassingDataObject: nmdc:0208512cc7a3301b279641703c2a1504 INFO:root:PassingDataObject: nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a -INFO:root:PassingDataObject: nmdc:23f5a0946351e2f19e3645314176dd67 INFO:root:PassingDataObject: nmdc:89e1e1cc7625f9fa924fd4056dbf37e2 -INFO:root:PassingDataObject: nmdc:0208512cc7a3301b279641703c2a1504 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, Annotation Activity for nmdc:mga0bm49 -INFO:root:PassingDataObject: nmdc:ebe48cd9014de805c0e4fbac3303de17 -INFO:root:PassingDataObject: nmdc:42e04ca80f7f90030cc55f88eb921184 -INFO:root:PassingDataObject: nmdc:59af950b2113c89c0fe24c8790eceeba -INFO:root:PassingDataObject: nmdc:c4d08b03afc1cb34733a836516041994 -INFO:root:PassingDataObject: nmdc:4889f391a9941911bd2909e7849b038e -INFO:root:PassingDataObject: nmdc:282bcab593d74add1aa86ded3d524418 -INFO:root:PassingDataObject: nmdc:27e2fc5e26eec6199bcb7da19e2b23fb -INFO:root:PassingDataObject: nmdc:a085c8a797b276804e939726d641af97 INFO:root:PassingDataObject: nmdc:cf9d6f35c3de5ec41e906d74a23f05fd -INFO:root:PassingDataObject: nmdc:bf47a0f9758517edea4597d444d0314c +INFO:root:PassingDataObject: nmdc:59af950b2113c89c0fe24c8790eceeba INFO:root:PassingDataObject: nmdc:51095a0a50c4861c643a5646053a6a65 -INFO:root:PassingDataObject: nmdc:14ce307f52824253ff14f58e71904d91 -INFO:root:PassingDataObject: nmdc:7cd4379f4819a0ed74f12d808455c955 +INFO:root:PassingDataObject: nmdc:1e980082bed35a0ff4b14795089c2ef6 INFO:root:PassingDataObject: nmdc:422b5be7f3656ada4dda780ae2679d2a +INFO:root:PassingDataObject: nmdc:282bcab593d74add1aa86ded3d524418 INFO:root:PassingDataObject: nmdc:859338b53423d31904cfbe53901bb672 INFO:root:PassingDataObject: nmdc:2f59766cf827d20c58246460cf94d60d -INFO:root:PassingDataObject: nmdc:1e980082bed35a0ff4b14795089c2ef6 +INFO:root:PassingDataObject: nmdc:ebe48cd9014de805c0e4fbac3303de17 INFO:root:PassingDataObject: nmdc:20d5aaa37f26fe462596f160c08ca5e5 +INFO:root:PassingDataObject: nmdc:bf47a0f9758517edea4597d444d0314c +INFO:root:PassingDataObject: nmdc:42e04ca80f7f90030cc55f88eb921184 +INFO:root:PassingDataObject: nmdc:4889f391a9941911bd2909e7849b038e +INFO:root:PassingDataObject: nmdc:a085c8a797b276804e939726d641af97 +INFO:root:PassingDataObject: nmdc:27e2fc5e26eec6199bcb7da19e2b23fb +INFO:root:PassingDataObject: nmdc:c4d08b03afc1cb34733a836516041994 INFO:root:PassingDataObject: nmdc:f137f3a9035136e8d6b7cd55ca862b42 +INFO:root:PassingDataObject: nmdc:7cd4379f4819a0ed74f12d808455c955 +INFO:root:PassingDataObject: nmdc:14ce307f52824253ff14f58e71904d91 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, MAGs Analysis Activity for nmdc:mga0bm49 -INFO:root:PassingDataObject: nmdc:5e3b1476e9ec74bf37cedc0cbda4abd9 INFO:root:PassingDataObject: nmdc:f3e4dae9029fb498ac85daa24ffc1222 +INFO:root:PassingDataObject: nmdc:5e3b1476e9ec74bf37cedc0cbda4abd9 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213332 @@ -4449,15 +4449,15 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213336 INFO:root:found 1 records INFO:root:record: nmdc:55a79b5dd58771e28686665e3c3faa0c, ReadBased Analysis Activity for nmdc:mga0rt44 +INFO:root:PassingDataObject: nmdc:eb71ec27a8d6d5881c7d31091faf9501 +INFO:root:PassingDataObject: nmdc:60e6f45dc4b2c03995647c6b4b780550 INFO:root:PassingDataObject: nmdc:c05d10c098c25ef44fbe6e27b4c88c86 INFO:root:PassingDataObject: nmdc:bfdc7ae8e2bc129a548daf6da8884212 -INFO:root:PassingDataObject: nmdc:60e6f45dc4b2c03995647c6b4b780550 -INFO:root:PassingDataObject: nmdc:1cd68fe37b48de6f8f542a71a550a796 -INFO:root:PassingDataObject: nmdc:eb71ec27a8d6d5881c7d31091faf9501 INFO:root:PassingDataObject: nmdc:70777cd32a3f9cc0e00841da144f1cf8 -INFO:root:PassingDataObject: nmdc:42a99767c538f2d4211f14a253c91aa4 +INFO:root:PassingDataObject: nmdc:1cd68fe37b48de6f8f542a71a550a796 INFO:root:PassingDataObject: nmdc:5089c93436a2d4968b97357391f7e8b8 INFO:root:PassingDataObject: nmdc:521fe79e687e03eefe255088d4e58b27 +INFO:root:PassingDataObject: nmdc:42a99767c538f2d4211f14a253c91aa4 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213336 @@ -4474,24 +4474,24 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213336 INFO:root:found 1 records INFO:root:record: nmdc:55a79b5dd58771e28686665e3c3faa0c, Annotation Activity for nmdc:mga0rt44 INFO:root:PassingDataObject: nmdc:1d11d0706c7f93cbdd917b933f3480f6 -INFO:root:PassingDataObject: nmdc:b41299917f11443dc03d69103de4d4d3 -INFO:root:PassingDataObject: nmdc:b719991a565c73f605777d5ec450bfb4 -INFO:root:PassingDataObject: nmdc:7363d3dd8fbc551726d74650490afcbd INFO:root:PassingDataObject: nmdc:77c246c4ca608cf0b8e84f613ab3cf62 -INFO:root:PassingDataObject: nmdc:3394f04036a1d9fe39aa7ce8952be6ec -INFO:root:PassingDataObject: nmdc:802c369f63dd999c598bbdb51e6294f4 -INFO:root:PassingDataObject: nmdc:209b4592ed4ede6d0210cb153a221405 -INFO:root:PassingDataObject: nmdc:2165685295996a9b4d09f5487a3b6a84 +INFO:root:PassingDataObject: nmdc:413265f22f10475c37b5743edee0bc1c INFO:root:PassingDataObject: nmdc:4eaa8dd743aad8db7574b4a0868ecdcd +INFO:root:PassingDataObject: nmdc:b41299917f11443dc03d69103de4d4d3 INFO:root:PassingDataObject: nmdc:1d87115c442a1f83190ae47c7fe4011f -INFO:root:PassingDataObject: nmdc:2d65021163d14b4e1afc3e3a18b37180 -INFO:root:PassingDataObject: nmdc:413265f22f10475c37b5743edee0bc1c -INFO:root:PassingDataObject: nmdc:4fda86c78c8ab3a500c939f33005756e -INFO:root:PassingDataObject: nmdc:9ebdfacaf54a24610c7563fa8a284aab INFO:root:PassingDataObject: nmdc:b798290a270d2e6d30cb5d47b1b25fb6 +INFO:root:PassingDataObject: nmdc:2165685295996a9b4d09f5487a3b6a84 +INFO:root:PassingDataObject: nmdc:7363d3dd8fbc551726d74650490afcbd INFO:root:PassingDataObject: nmdc:31e72c239c392d0b3c49729486d559b2 -INFO:root:PassingDataObject: nmdc:a88624e393765fd4462668a234e08c32 +INFO:root:PassingDataObject: nmdc:802c369f63dd999c598bbdb51e6294f4 +INFO:root:PassingDataObject: nmdc:3394f04036a1d9fe39aa7ce8952be6ec +INFO:root:PassingDataObject: nmdc:2d65021163d14b4e1afc3e3a18b37180 INFO:root:PassingDataObject: nmdc:7b8450ff69da0daf2b2de6a493904d77 +INFO:root:PassingDataObject: nmdc:9ebdfacaf54a24610c7563fa8a284aab +INFO:root:PassingDataObject: nmdc:a88624e393765fd4462668a234e08c32 +INFO:root:PassingDataObject: nmdc:b719991a565c73f605777d5ec450bfb4 +INFO:root:PassingDataObject: nmdc:4fda86c78c8ab3a500c939f33005756e +INFO:root:PassingDataObject: nmdc:209b4592ed4ede6d0210cb153a221405 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213336 @@ -4517,49 +4517,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213335 INFO:root:found 1 records INFO:root:record: nmdc:4a61b553ef3a69dd77964cc973bc8dc9, ReadBased Analysis Activity for nmdc:mga0qb88 -INFO:root:PassingDataObject: nmdc:50a28b128e4f5f462b1cd0af666da6b5 -INFO:root:PassingDataObject: nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 -INFO:root:PassingDataObject: nmdc:a1599cb0082b1fe131190910d097a469 +INFO:root:PassingDataObject: nmdc:eed53b443c40b88bdc3dd73da18d01ab INFO:root:PassingDataObject: nmdc:9d4512c07a7e449a5a554c7f59163331 -INFO:root:PassingDataObject: nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 +INFO:root:PassingDataObject: nmdc:50a28b128e4f5f462b1cd0af666da6b5 INFO:root:PassingDataObject: nmdc:2c512607f7735e7101654a1b08665eef +INFO:root:PassingDataObject: nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 +INFO:root:PassingDataObject: nmdc:a1599cb0082b1fe131190910d097a469 INFO:root:PassingDataObject: nmdc:e7261968652b1d553c1be543b120b27e -INFO:root:PassingDataObject: nmdc:eed53b443c40b88bdc3dd73da18d01ab INFO:root:PassingDataObject: nmdc:fe1dc4c852803fdf077c2f8c139bb27e +INFO:root:PassingDataObject: nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213335 INFO:root:found 1 records INFO:root:record: nmdc:4a61b553ef3a69dd77964cc973bc8dc9, Assembly Activity for nmdc:mga0qb88 -INFO:root:PassingDataObject: nmdc:0fec8d61f70b5c0b14993d3f29a1274e -INFO:root:PassingDataObject: nmdc:7658c6216a5bb8954ba11e9ac1d8d498 -INFO:root:PassingDataObject: nmdc:48a79f97b3b00d3656d52e1cdcf63704 INFO:root:PassingDataObject: nmdc:309988684d9da7eb4b2773943f1f9085 INFO:root:PassingDataObject: nmdc:81010adabdfe6803e88d304331157710 +INFO:root:PassingDataObject: nmdc:7658c6216a5bb8954ba11e9ac1d8d498 +INFO:root:PassingDataObject: nmdc:48a79f97b3b00d3656d52e1cdcf63704 +INFO:root:PassingDataObject: nmdc:0fec8d61f70b5c0b14993d3f29a1274e INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213335 INFO:root:found 1 records INFO:root:record: nmdc:4a61b553ef3a69dd77964cc973bc8dc9, Annotation Activity for nmdc:mga0qb88 INFO:root:PassingDataObject: nmdc:cdd9ccaccccbe3cac025d29bbb227bd6 -INFO:root:PassingDataObject: nmdc:4dcd2a6fb1cde4636c3a439f28ebcc07 -INFO:root:PassingDataObject: nmdc:bb8e1a98b37dc9d38ec23de4dfb27322 +INFO:root:PassingDataObject: nmdc:a7e73e8280c7e40c6f58e7555eab1785 +INFO:root:PassingDataObject: nmdc:291474f27b200284f4a6d3756c9e952b INFO:root:PassingDataObject: nmdc:0bc2b668fdb4493be66e91e9a8140479 -INFO:root:PassingDataObject: nmdc:ed6798286d569b99d4fbfbfbd8d52d87 INFO:root:PassingDataObject: nmdc:699066fa8f3a85ad9c15a4cd36ad1da1 +INFO:root:PassingDataObject: nmdc:ed6798286d569b99d4fbfbfbd8d52d87 INFO:root:PassingDataObject: nmdc:2dc57644ef57bfa463fa160af63ac3cb -INFO:root:PassingDataObject: nmdc:a75dd63dd066112f4c73ad1b160a7463 -INFO:root:PassingDataObject: nmdc:e84a316709e755fb6dca39a61617c352 -INFO:root:PassingDataObject: nmdc:1f6660eefbdc8ff5c225251605be0841 +INFO:root:PassingDataObject: nmdc:bb8e1a98b37dc9d38ec23de4dfb27322 +INFO:root:PassingDataObject: nmdc:df217bcf975467a46e6d2e4c49d1fbf7 +INFO:root:PassingDataObject: nmdc:f1431ec8027739453171991dadd0ec3b INFO:root:PassingDataObject: nmdc:e75220a1919aa32a81c4d84bd234b7f7 -INFO:root:PassingDataObject: nmdc:9f5a0e5eb26bba187e0bc674889549c6 INFO:root:PassingDataObject: nmdc:3d8bcc07c3f44ddd9d1ccb6da9bafeda -INFO:root:PassingDataObject: nmdc:291474f27b200284f4a6d3756c9e952b -INFO:root:PassingDataObject: nmdc:a7e73e8280c7e40c6f58e7555eab1785 +INFO:root:PassingDataObject: nmdc:4dcd2a6fb1cde4636c3a439f28ebcc07 INFO:root:PassingDataObject: nmdc:fc3e720f37042b170a3242dcda4a80f7 -INFO:root:PassingDataObject: nmdc:df217bcf975467a46e6d2e4c49d1fbf7 +INFO:root:PassingDataObject: nmdc:e84a316709e755fb6dca39a61617c352 INFO:root:PassingDataObject: nmdc:60fbedcd216f515df432b05cde0167bd -INFO:root:PassingDataObject: nmdc:f1431ec8027739453171991dadd0ec3b +INFO:root:PassingDataObject: nmdc:a75dd63dd066112f4c73ad1b160a7463 +INFO:root:PassingDataObject: nmdc:1f6660eefbdc8ff5c225251605be0841 +INFO:root:PassingDataObject: nmdc:9f5a0e5eb26bba187e0bc674889549c6 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213335 @@ -4585,49 +4585,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213339 INFO:root:found 1 records INFO:root:record: nmdc:d5bfaa5de752e0fb580863a72c5660d5, ReadBased Analysis Activity for nmdc:mga09m47 -INFO:root:PassingDataObject: nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a -INFO:root:PassingDataObject: nmdc:d361583c803e94e6ebd9c91bf184107c -INFO:root:PassingDataObject: nmdc:43d29eef149bc475f58a33d4d39b3870 -INFO:root:PassingDataObject: nmdc:0bec77a51b6d2bea22a87806d8312308 -INFO:root:PassingDataObject: nmdc:e738ee2e3aa9d0dcb33b765880763505 +INFO:root:PassingDataObject: nmdc:1ab53810aec7d030b99f666cb6cb8599 INFO:root:PassingDataObject: nmdc:821e594f40527f78cc9ba890eff6810a INFO:root:PassingDataObject: nmdc:c8319bbc7c65d0031cd161cb55c28569 -INFO:root:PassingDataObject: nmdc:1ab53810aec7d030b99f666cb6cb8599 INFO:root:PassingDataObject: nmdc:7912c0b2e56700f6f465b0570c08325e +INFO:root:PassingDataObject: nmdc:d361583c803e94e6ebd9c91bf184107c +INFO:root:PassingDataObject: nmdc:e738ee2e3aa9d0dcb33b765880763505 +INFO:root:PassingDataObject: nmdc:0bec77a51b6d2bea22a87806d8312308 +INFO:root:PassingDataObject: nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a +INFO:root:PassingDataObject: nmdc:43d29eef149bc475f58a33d4d39b3870 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213339 INFO:root:found 1 records INFO:root:record: nmdc:d5bfaa5de752e0fb580863a72c5660d5, Assembly Activity for nmdc:mga09m47 -INFO:root:PassingDataObject: nmdc:3953f6dace895eb7ce802eea576fbbde INFO:root:PassingDataObject: nmdc:1290fa0f1f45c1e7cddb8462b21ade6f INFO:root:PassingDataObject: nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 -INFO:root:PassingDataObject: nmdc:e3d8ae36d4aab87700ef3abc3268f909 INFO:root:PassingDataObject: nmdc:7ef7c2514f6682e3b004f9cb541f6e72 +INFO:root:PassingDataObject: nmdc:e3d8ae36d4aab87700ef3abc3268f909 +INFO:root:PassingDataObject: nmdc:3953f6dace895eb7ce802eea576fbbde INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213339 INFO:root:found 1 records INFO:root:record: nmdc:d5bfaa5de752e0fb580863a72c5660d5, Annotation Activity for nmdc:mga09m47 -INFO:root:PassingDataObject: nmdc:6d64979efbf7c572f3b2bfc35a2de2b5 -INFO:root:PassingDataObject: nmdc:5a37b6d1335eaf38ebcb5d78c580e6ef INFO:root:PassingDataObject: nmdc:40f7887c96948e1cc1607f6fbd32d50e -INFO:root:PassingDataObject: nmdc:251d2396996ea1902ac342159f717b65 -INFO:root:PassingDataObject: nmdc:9539560ae69b1c85440fffb9491b1b8e -INFO:root:PassingDataObject: nmdc:1ad000ccd668ce454d60fcc76f15e61b INFO:root:PassingDataObject: nmdc:028728c35338843103bd8106ba1dea95 -INFO:root:PassingDataObject: nmdc:fe36158d768b13039e33010fa93d2360 -INFO:root:PassingDataObject: nmdc:92ad4c01bea33d979af545f7cea0ebb4 -INFO:root:PassingDataObject: nmdc:af7ecd6979eb75f870bde41aec427719 -INFO:root:PassingDataObject: nmdc:b08e38ab325687379ab1ad0fb114e899 +INFO:root:PassingDataObject: nmdc:9539560ae69b1c85440fffb9491b1b8e +INFO:root:PassingDataObject: nmdc:a6ba30afa224c591cf7c7d5ad2233bb0 +INFO:root:PassingDataObject: nmdc:9a2799e2ac483dab03eeab9e2e47d180 INFO:root:PassingDataObject: nmdc:172f913f7146fa052ad625a715325741 +INFO:root:PassingDataObject: nmdc:251d2396996ea1902ac342159f717b65 INFO:root:PassingDataObject: nmdc:669dc7f5a22354fd6754dab736265d8b +INFO:root:PassingDataObject: nmdc:39dc1db48734fd51c1abab1c7322fa42 +INFO:root:PassingDataObject: nmdc:92ad4c01bea33d979af545f7cea0ebb4 +INFO:root:PassingDataObject: nmdc:6d64979efbf7c572f3b2bfc35a2de2b5 +INFO:root:PassingDataObject: nmdc:06c665825e03df02d4781dbc52fc0999 +INFO:root:PassingDataObject: nmdc:5a37b6d1335eaf38ebcb5d78c580e6ef +INFO:root:PassingDataObject: nmdc:af7ecd6979eb75f870bde41aec427719 INFO:root:PassingDataObject: nmdc:17c878bd5fef924203fc47808cf49eb1 +INFO:root:PassingDataObject: nmdc:b08e38ab325687379ab1ad0fb114e899 +INFO:root:PassingDataObject: nmdc:1ad000ccd668ce454d60fcc76f15e61b +INFO:root:PassingDataObject: nmdc:fe36158d768b13039e33010fa93d2360 INFO:root:PassingDataObject: nmdc:6816d848e7737590828d149eb1eb8d63 -INFO:root:PassingDataObject: nmdc:a6ba30afa224c591cf7c7d5ad2233bb0 -INFO:root:PassingDataObject: nmdc:06c665825e03df02d4781dbc52fc0999 -INFO:root:PassingDataObject: nmdc:39dc1db48734fd51c1abab1c7322fa42 -INFO:root:PassingDataObject: nmdc:9a2799e2ac483dab03eeab9e2e47d180 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213339 @@ -4653,56 +4653,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, ReadBased Analysis Activity for nmdc:mga0b303 -INFO:root:PassingDataObject: nmdc:fe8030bc7f875c91dc1261824bde2d32 INFO:root:PassingDataObject: nmdc:09bfc13dc9a390c3ee97e13baa5f7adf +INFO:root:PassingDataObject: nmdc:5975aa9e874a2aee8c733ae8c679cc0a INFO:root:PassingDataObject: nmdc:4d739fc9668c7cdf9ddc040214f60cf9 +INFO:root:PassingDataObject: nmdc:fe8030bc7f875c91dc1261824bde2d32 INFO:root:PassingDataObject: nmdc:02d268c49f49ec83b65b6395555ee780 -INFO:root:PassingDataObject: nmdc:5975aa9e874a2aee8c733ae8c679cc0a +INFO:root:PassingDataObject: nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa +INFO:root:PassingDataObject: nmdc:16548c714efadc888fc21e9dc91cd38c INFO:root:PassingDataObject: nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c INFO:root:PassingDataObject: nmdc:99b86a6cbd2e5f5b1a7ffa0222fc0c78 -INFO:root:PassingDataObject: nmdc:16548c714efadc888fc21e9dc91cd38c -INFO:root:PassingDataObject: nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, Assembly Activity for nmdc:mga0b303 +INFO:root:PassingDataObject: nmdc:732e1036130617f691e05c2e88cdb7ca INFO:root:PassingDataObject: nmdc:2055a22c0e446c599107da987bf71f53 +INFO:root:PassingDataObject: nmdc:b48f26208908b023264455703accf2e8 INFO:root:PassingDataObject: nmdc:1ca2df80fed289a8b8157a0e28f8078c INFO:root:PassingDataObject: nmdc:61321e6aa841ecf52cfcc1ebcdf9bb5a -INFO:root:PassingDataObject: nmdc:732e1036130617f691e05c2e88cdb7ca -INFO:root:PassingDataObject: nmdc:b48f26208908b023264455703accf2e8 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, Annotation Activity for nmdc:mga0b303 -INFO:root:PassingDataObject: nmdc:0724ae02fd0d7c91b80ccee1db97b997 -INFO:root:PassingDataObject: nmdc:23fa011ddefafc0181efc8b64e9fb8b8 -INFO:root:PassingDataObject: nmdc:e6befa18002d08e337c9c19d8ec134b4 -INFO:root:PassingDataObject: nmdc:d8926a74fdae6c6dfcc6752139b5a1b9 -INFO:root:PassingDataObject: nmdc:ddf8db72be51acd7373f3006eb0c72f7 INFO:root:PassingDataObject: nmdc:ac89a70057bae098c9cc18a27ce3cfc5 +INFO:root:PassingDataObject: nmdc:15126953e8e9477a1ab306e2cf76c4bf +INFO:root:PassingDataObject: nmdc:b2db7bccac03fad63b2c3a78dba272a5 +INFO:root:PassingDataObject: nmdc:cb523bbe9a212e59697b6c95e3083a7f INFO:root:PassingDataObject: nmdc:98e93990aa9e86a52c9c5bbe8626e79b -INFO:root:PassingDataObject: nmdc:006ef2128b70f7b4a79d08c749bacf42 INFO:root:PassingDataObject: nmdc:d92f90e2dbe1f0c0f2d909a7483183c6 +INFO:root:PassingDataObject: nmdc:266c0fb500e05c49c8b3001b2337ed8f INFO:root:PassingDataObject: nmdc:199d63c8bddef62de89dbef771911ba6 -INFO:root:PassingDataObject: nmdc:ac48bb75f2aac30f1824fc3244c10e57 INFO:root:PassingDataObject: nmdc:a58d7d7837132940f5abb5898ae2a642 +INFO:root:PassingDataObject: nmdc:e6befa18002d08e337c9c19d8ec134b4 +INFO:root:PassingDataObject: nmdc:e729fb28f4f112987fca4b28c042fd0a INFO:root:PassingDataObject: nmdc:69655dace031567379dd8f822027f515 -INFO:root:PassingDataObject: nmdc:cb523bbe9a212e59697b6c95e3083a7f +INFO:root:PassingDataObject: nmdc:006ef2128b70f7b4a79d08c749bacf42 INFO:root:PassingDataObject: nmdc:0a5c81275fe86812aa2a9a03445ce7db -INFO:root:PassingDataObject: nmdc:15126953e8e9477a1ab306e2cf76c4bf -INFO:root:PassingDataObject: nmdc:b2db7bccac03fad63b2c3a78dba272a5 -INFO:root:PassingDataObject: nmdc:e729fb28f4f112987fca4b28c042fd0a -INFO:root:PassingDataObject: nmdc:266c0fb500e05c49c8b3001b2337ed8f +INFO:root:PassingDataObject: nmdc:23fa011ddefafc0181efc8b64e9fb8b8 +INFO:root:PassingDataObject: nmdc:0724ae02fd0d7c91b80ccee1db97b997 +INFO:root:PassingDataObject: nmdc:d8926a74fdae6c6dfcc6752139b5a1b9 +INFO:root:PassingDataObject: nmdc:ac48bb75f2aac30f1824fc3244c10e57 +INFO:root:PassingDataObject: nmdc:ddf8db72be51acd7373f3006eb0c72f7 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, MAGs Analysis Activity for nmdc:mga0b303 -INFO:root:PassingDataObject: nmdc:4b0afce66fa44173ba0ac1782e6aefac INFO:root:PassingDataObject: nmdc:1d46e77d8f4526621d8fc1873e83c25e +INFO:root:PassingDataObject: nmdc:4b0afce66fa44173ba0ac1782e6aefac INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213337 @@ -4721,12 +4721,12 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213342 INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, ReadBased Analysis Activity for nmdc:mga0x806 +INFO:root:PassingDataObject: nmdc:a024c99e60397c07ea093f5b54c16c22 +INFO:root:PassingDataObject: nmdc:624228246f986e137e024254248de1b5 INFO:root:PassingDataObject: nmdc:fe51c74e0d293fa876a4901ac324f4c2 -INFO:root:PassingDataObject: nmdc:52e679ca629ec3a1362cfc1cfe322634 -INFO:root:PassingDataObject: nmdc:4be597d8228615626aaeacf3a49ff1f1 INFO:root:PassingDataObject: nmdc:443956865b96dafaacf0840ce48af215 -INFO:root:PassingDataObject: nmdc:624228246f986e137e024254248de1b5 -INFO:root:PassingDataObject: nmdc:a024c99e60397c07ea093f5b54c16c22 +INFO:root:PassingDataObject: nmdc:4be597d8228615626aaeacf3a49ff1f1 +INFO:root:PassingDataObject: nmdc:52e679ca629ec3a1362cfc1cfe322634 INFO:root:PassingDataObject: nmdc:d9698d68c9284f872a7dbd35bb65ac6a INFO:root:PassingDataObject: nmdc:4972393ee4a6ddec7e85c6c1cbecfa06 INFO:root:PassingDataObject: nmdc:e25ad52b779d9726eb5b560ecaa7324b @@ -4737,40 +4737,40 @@ INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, Assembly Activity for nmdc:mga0x806 INFO:root:PassingDataObject: nmdc:75285f282f19f1277195e80035bc15c1 INFO:root:PassingDataObject: nmdc:7e71569c6e5d1b93e9b9db9135aabaf7 -INFO:root:PassingDataObject: nmdc:69a51c8e981eaed934c8000fd16fc7d9 INFO:root:PassingDataObject: nmdc:4c1f0442578d7649ce41a599eb14d091 INFO:root:PassingDataObject: nmdc:f5473910671d0c5c169246a972dbf619 +INFO:root:PassingDataObject: nmdc:69a51c8e981eaed934c8000fd16fc7d9 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213342 INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, Annotation Activity for nmdc:mga0x806 -INFO:root:PassingDataObject: nmdc:4e5ff60527aa9e3a89ac55d7d61d2b71 -INFO:root:PassingDataObject: nmdc:63ccd37333942301cf401c3a13f86a20 -INFO:root:PassingDataObject: nmdc:830605503e444455c0c3efef582f6bc4 -INFO:root:PassingDataObject: nmdc:1bb5ee43e96bf69416adefa8b7902a38 +INFO:root:PassingDataObject: nmdc:bf1fa52ab0f6aba27003d15918db5b81 INFO:root:PassingDataObject: nmdc:4b5abe0d30be22275ba53bab3803168e -INFO:root:PassingDataObject: nmdc:feaf9d879bfab586b4051f8d7f84a0a0 -INFO:root:PassingDataObject: nmdc:94e76584549ce3269937ef04bef75359 +INFO:root:PassingDataObject: nmdc:5dd1894d518531d36a70f97823849dc6 +INFO:root:PassingDataObject: nmdc:4e5ff60527aa9e3a89ac55d7d61d2b71 +INFO:root:PassingDataObject: nmdc:ba09aa2fa377e1328435b9856c3d8d81 INFO:root:PassingDataObject: nmdc:cf1088dd7eefb341bebeaf793d1e03cd +INFO:root:PassingDataObject: nmdc:50dffb6c9f8717a6f4b59c824e2e04d0 INFO:root:PassingDataObject: nmdc:8d028fa5a7e0c466b4d298b1db7c272b +INFO:root:PassingDataObject: nmdc:1bb5ee43e96bf69416adefa8b7902a38 INFO:root:PassingDataObject: nmdc:03db808c90918e40a8152765867e54c8 -INFO:root:PassingDataObject: nmdc:b7efbb84a2073e7c127b1ed5fe389843 +INFO:root:PassingDataObject: nmdc:67da006d1637db8bd8f625fcf49622ef INFO:root:PassingDataObject: nmdc:efc037f18c1fc10ec47d382997ded572 -INFO:root:PassingDataObject: nmdc:b4b3a8b83844a44922ef5bb9e19f3c1f -INFO:root:PassingDataObject: nmdc:50dffb6c9f8717a6f4b59c824e2e04d0 -INFO:root:PassingDataObject: nmdc:5dd1894d518531d36a70f97823849dc6 -INFO:root:PassingDataObject: nmdc:ba09aa2fa377e1328435b9856c3d8d81 +INFO:root:PassingDataObject: nmdc:63ccd37333942301cf401c3a13f86a20 INFO:root:PassingDataObject: nmdc:f5a6c612749a76e6a4c14604707ac3a0 -INFO:root:PassingDataObject: nmdc:67da006d1637db8bd8f625fcf49622ef -INFO:root:PassingDataObject: nmdc:bf1fa52ab0f6aba27003d15918db5b81 +INFO:root:PassingDataObject: nmdc:b7efbb84a2073e7c127b1ed5fe389843 +INFO:root:PassingDataObject: nmdc:94e76584549ce3269937ef04bef75359 +INFO:root:PassingDataObject: nmdc:feaf9d879bfab586b4051f8d7f84a0a0 +INFO:root:PassingDataObject: nmdc:b4b3a8b83844a44922ef5bb9e19f3c1f +INFO:root:PassingDataObject: nmdc:830605503e444455c0c3efef582f6bc4 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213342 INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, MAGs Analysis Activity for nmdc:mga0x806 -INFO:root:PassingDataObject: nmdc:d534634b8fb94a3ae3477b1bef684944 INFO:root:PassingDataObject: nmdc:453599679333105d04b6fee0ae0a7549 +INFO:root:PassingDataObject: nmdc:d534634b8fb94a3ae3477b1bef684944 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213342 @@ -4782,63 +4782,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4fa30e2045705f3 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, Read QC Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:0ddbc9424f94d92db9d78d0c00b89c49 INFO:root:PassingDataObject: nmdc:0e35f6631b3eac4b2cedc89073f9003f +INFO:root:PassingDataObject: nmdc:0ddbc9424f94d92db9d78d0c00b89c49 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, ReadBased Analysis Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:dfe464eccd67275b1a2260b3a220a989 -INFO:root:PassingDataObject: nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 +INFO:root:PassingDataObject: nmdc:392ed4abdde861ca7b0c054ef1a84d58 +INFO:root:PassingDataObject: nmdc:ae7950a56988de4518d577ddd9407193 INFO:root:PassingDataObject: nmdc:678f73fd90526668a53f9b85569ae668 -INFO:root:PassingDataObject: nmdc:9b58ec241e99903bab584889485b2e6e INFO:root:PassingDataObject: nmdc:b502bbfab4472b9f807e42da6669ff03 INFO:root:PassingDataObject: nmdc:418fdfd8511374f352cc1874a62900ee -INFO:root:PassingDataObject: nmdc:392ed4abdde861ca7b0c054ef1a84d58 -INFO:root:PassingDataObject: nmdc:ae7950a56988de4518d577ddd9407193 INFO:root:PassingDataObject: nmdc:17e52966db1deffee78333283d09c1e6 +INFO:root:PassingDataObject: nmdc:dfe464eccd67275b1a2260b3a220a989 +INFO:root:PassingDataObject: nmdc:9b58ec241e99903bab584889485b2e6e +INFO:root:PassingDataObject: nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, Assembly Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:1c3861f53217f359d22be182d2c58936 INFO:root:PassingDataObject: nmdc:ec920dd0af387efe10935cd876f90164 -INFO:root:PassingDataObject: nmdc:f0a6e994ecf21ff02d973c3a8d015a63 -INFO:root:PassingDataObject: nmdc:e3a366b4c1b9c56427d411f26b766dcb INFO:root:PassingDataObject: nmdc:77530c3056fbba7914f2d98baf3fedd0 +INFO:root:PassingDataObject: nmdc:1c3861f53217f359d22be182d2c58936 +INFO:root:PassingDataObject: nmdc:e3a366b4c1b9c56427d411f26b766dcb +INFO:root:PassingDataObject: nmdc:f0a6e994ecf21ff02d973c3a8d015a63 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, Annotation Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:0ea0a925d958dce862a237e5288d7b90 -INFO:root:PassingDataObject: nmdc:714ca6e0877f4102cdf9bdd599992620 -INFO:root:PassingDataObject: nmdc:c38a01e8026a9b4b5494b9d9980b557d -INFO:root:PassingDataObject: nmdc:2d71fa79601cea4274b6c1c5a6191b20 -INFO:root:PassingDataObject: nmdc:734689f0efd146f95f20cae8767a90fd -INFO:root:PassingDataObject: nmdc:becf90aefa0db5cccce9ac4e99c3f730 -INFO:root:PassingDataObject: nmdc:335846b6688de171ec26c49e0b83d82c -INFO:root:PassingDataObject: nmdc:69018c93fed333e556733fb2327345fc -INFO:root:PassingDataObject: nmdc:4f15f05a1f47ae8b851c731e5a89a1ac +INFO:root:PassingDataObject: nmdc:dfb38570f7169c63285af23233600f83 +INFO:root:PassingDataObject: nmdc:14efd905856ae7d7664791ede209d484 INFO:root:PassingDataObject: nmdc:03710828fe2e40eb8c03fe1f1309bfda +INFO:root:PassingDataObject: nmdc:69018c93fed333e556733fb2327345fc +INFO:root:PassingDataObject: nmdc:734689f0efd146f95f20cae8767a90fd +INFO:root:PassingDataObject: nmdc:2d71fa79601cea4274b6c1c5a6191b20 +INFO:root:PassingDataObject: nmdc:a037493323442149832334d8265b54b1 INFO:root:PassingDataObject: nmdc:e3d5f0521ed6eb53381d7e7af1cea48c -INFO:root:PassingDataObject: nmdc:ffb6c5546dbc4499f9e3493239df83de INFO:root:PassingDataObject: nmdc:09def1cec17d548fb5aa361e9907b2dc -INFO:root:PassingDataObject: nmdc:dfb38570f7169c63285af23233600f83 -INFO:root:PassingDataObject: nmdc:9b28ace001b3144605dd4d43f3202606 -INFO:root:PassingDataObject: nmdc:14efd905856ae7d7664791ede209d484 +INFO:root:PassingDataObject: nmdc:714ca6e0877f4102cdf9bdd599992620 INFO:root:PassingDataObject: nmdc:48a6868e79b361b9606288e6d1b5c021 -INFO:root:PassingDataObject: nmdc:a037493323442149832334d8265b54b1 +INFO:root:PassingDataObject: nmdc:9b28ace001b3144605dd4d43f3202606 +INFO:root:PassingDataObject: nmdc:0ea0a925d958dce862a237e5288d7b90 +INFO:root:PassingDataObject: nmdc:335846b6688de171ec26c49e0b83d82c +INFO:root:PassingDataObject: nmdc:c38a01e8026a9b4b5494b9d9980b557d INFO:root:PassingDataObject: nmdc:9ba1775c290b30139d134d32a7b7520b +INFO:root:PassingDataObject: nmdc:becf90aefa0db5cccce9ac4e99c3f730 +INFO:root:PassingDataObject: nmdc:4f15f05a1f47ae8b851c731e5a89a1ac +INFO:root:PassingDataObject: nmdc:ffb6c5546dbc4499f9e3493239df83de INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, MAGs Analysis Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:54cab8776df993ab9ac3c97bec28bfd8 INFO:root:PassingDataObject: nmdc:2f1d2ee7349525142f01c694710353c7 +INFO:root:PassingDataObject: nmdc:54cab8776df993ab9ac3c97bec28bfd8 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213340 @@ -4857,56 +4857,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, ReadBased Analysis Activity for nmdc:mga00j44 -INFO:root:PassingDataObject: nmdc:568a5dc85e94b6f90d3811f5cf953592 -INFO:root:PassingDataObject: nmdc:1381039de3a60dc7ab5ad30679eec98e -INFO:root:PassingDataObject: nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc INFO:root:PassingDataObject: nmdc:27d4ee97741634f477cb80fe90502cb1 +INFO:root:PassingDataObject: nmdc:1381039de3a60dc7ab5ad30679eec98e INFO:root:PassingDataObject: nmdc:46f4d0431ee1c17a9fa63a699190d48a -INFO:root:PassingDataObject: nmdc:5cfab3386ea0289c12df7adf724aedb2 +INFO:root:PassingDataObject: nmdc:c0f5be7b98b9076e8a7472d3a591250b INFO:root:PassingDataObject: nmdc:078eaa687d5fb03268c8d075ea0fc698 +INFO:root:PassingDataObject: nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc +INFO:root:PassingDataObject: nmdc:5cfab3386ea0289c12df7adf724aedb2 INFO:root:PassingDataObject: nmdc:8751a56c3673edf134302b976d160b76 -INFO:root:PassingDataObject: nmdc:c0f5be7b98b9076e8a7472d3a591250b +INFO:root:PassingDataObject: nmdc:568a5dc85e94b6f90d3811f5cf953592 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, Assembly Activity for nmdc:mga00j44 -INFO:root:PassingDataObject: nmdc:7fbe406ab0837d507ceec7f5eb023be4 -INFO:root:PassingDataObject: nmdc:1676817d11fb0a8a2253b3ad8c349efb -INFO:root:PassingDataObject: nmdc:bcc861fad2312fe5cf8af409cb9b899b INFO:root:PassingDataObject: nmdc:abc6615b11cef93b8d3ec01850d0969f +INFO:root:PassingDataObject: nmdc:bcc861fad2312fe5cf8af409cb9b899b INFO:root:PassingDataObject: nmdc:2716879930e592b68f9b8c743955c594 +INFO:root:PassingDataObject: nmdc:7fbe406ab0837d507ceec7f5eb023be4 +INFO:root:PassingDataObject: nmdc:1676817d11fb0a8a2253b3ad8c349efb INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, Annotation Activity for nmdc:mga00j44 -INFO:root:PassingDataObject: nmdc:69913f2262b1a71eecfa567aa88f0d1e -INFO:root:PassingDataObject: nmdc:66e23166a2854620aa76ac1044342927 -INFO:root:PassingDataObject: nmdc:a3a40f52611ea96b332a6f4c8131dc77 -INFO:root:PassingDataObject: nmdc:5cba6531acd3b3afb997cca5bed23e60 -INFO:root:PassingDataObject: nmdc:1b2405d515a530d9d1f842d0a5cf6a96 INFO:root:PassingDataObject: nmdc:f092e4331eb96881920f6ea40d2b73bb +INFO:root:PassingDataObject: nmdc:970885bd299cf41938e0e45812393c92 +INFO:root:PassingDataObject: nmdc:5cba6531acd3b3afb997cca5bed23e60 +INFO:root:PassingDataObject: nmdc:13f9a289b51b36015e934848ee1af6c1 INFO:root:PassingDataObject: nmdc:43878732be1f388246bef815cfac757c +INFO:root:PassingDataObject: nmdc:505b3fd80c965d0db64d70719243154e +INFO:root:PassingDataObject: nmdc:a3a40f52611ea96b332a6f4c8131dc77 +INFO:root:PassingDataObject: nmdc:faa2567e321af1e65a359432ef504f8a +INFO:root:PassingDataObject: nmdc:1b2405d515a530d9d1f842d0a5cf6a96 INFO:root:PassingDataObject: nmdc:f9b5c4c85094392ac15ebef85536ddb7 -INFO:root:PassingDataObject: nmdc:91dc16794059c3bacecd4e266e3ed75f -INFO:root:PassingDataObject: nmdc:a3e34e995b1591ed8675bfdeffa136cb INFO:root:PassingDataObject: nmdc:5874487f101c0626d9e3b9eef97f8b4f -INFO:root:PassingDataObject: nmdc:a0323cf3827a631de9b9fc94a55fb8cb -INFO:root:PassingDataObject: nmdc:970885bd299cf41938e0e45812393c92 -INFO:root:PassingDataObject: nmdc:c6d2d201b4c031bf740da514c7359530 -INFO:root:PassingDataObject: nmdc:13f9a289b51b36015e934848ee1af6c1 INFO:root:PassingDataObject: nmdc:edbe158b070903c0769a5a404b4b1e2c +INFO:root:PassingDataObject: nmdc:66e23166a2854620aa76ac1044342927 +INFO:root:PassingDataObject: nmdc:a3e34e995b1591ed8675bfdeffa136cb +INFO:root:PassingDataObject: nmdc:69913f2262b1a71eecfa567aa88f0d1e +INFO:root:PassingDataObject: nmdc:c6d2d201b4c031bf740da514c7359530 INFO:root:PassingDataObject: nmdc:71223c6b05b997c910ab9d9ee43a108e -INFO:root:PassingDataObject: nmdc:faa2567e321af1e65a359432ef504f8a -INFO:root:PassingDataObject: nmdc:505b3fd80c965d0db64d70719243154e +INFO:root:PassingDataObject: nmdc:91dc16794059c3bacecd4e266e3ed75f +INFO:root:PassingDataObject: nmdc:a0323cf3827a631de9b9fc94a55fb8cb INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, MAGs Analysis Activity for nmdc:mga00j44 -INFO:root:PassingDataObject: nmdc:08b1d4418b68ece973a9b8d904118b35 INFO:root:PassingDataObject: nmdc:9e06bee2897976eaf3f5f80161a20ee7 +INFO:root:PassingDataObject: nmdc:08b1d4418b68ece973a9b8d904118b35 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213341 @@ -4918,63 +4918,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6e84b6d72daf435 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, Read QC Activity for nmdc:mga08009 -INFO:root:PassingDataObject: nmdc:0e567de41f3253cae20169aa6faa5cac INFO:root:PassingDataObject: nmdc:483f7e6992e20f5a1a09a92d17f7cea4 +INFO:root:PassingDataObject: nmdc:0e567de41f3253cae20169aa6faa5cac INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, ReadBased Analysis Activity for nmdc:mga08009 -INFO:root:PassingDataObject: nmdc:25c22f7a2e3c7594fd619e68c21bbf7b -INFO:root:PassingDataObject: nmdc:8a2a5d0c8a30aeb106361a08fa17db00 +INFO:root:PassingDataObject: nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 INFO:root:PassingDataObject: nmdc:d8c409788042d02d9eaac0dabdfc82ef +INFO:root:PassingDataObject: nmdc:209438a5ee7b712c9f167c42ac9dea49 +INFO:root:PassingDataObject: nmdc:8a2a5d0c8a30aeb106361a08fa17db00 INFO:root:PassingDataObject: nmdc:8daa4e616f01adecebfec90bc9130985 -INFO:root:PassingDataObject: nmdc:84e2bf02fb5e6ee6d02eac4406ea02db -INFO:root:PassingDataObject: nmdc:41efc00020b49913588cbde1f6c9d701 INFO:root:PassingDataObject: nmdc:156e32e85e85365894929bd421fe30f6 -INFO:root:PassingDataObject: nmdc:209438a5ee7b712c9f167c42ac9dea49 -INFO:root:PassingDataObject: nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 +INFO:root:PassingDataObject: nmdc:41efc00020b49913588cbde1f6c9d701 +INFO:root:PassingDataObject: nmdc:84e2bf02fb5e6ee6d02eac4406ea02db +INFO:root:PassingDataObject: nmdc:25c22f7a2e3c7594fd619e68c21bbf7b INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, Assembly Activity for nmdc:mga08009 -INFO:root:PassingDataObject: nmdc:82de6e9679c7d42e0ac1f58e06630d54 INFO:root:PassingDataObject: nmdc:acdc8bced0d11f98aaeb11a5cbd22436 INFO:root:PassingDataObject: nmdc:9c91f602e45ac73701126b5f1ecae321 -INFO:root:PassingDataObject: nmdc:4a55d13b3dbf537c5709941bb501307e INFO:root:PassingDataObject: nmdc:32902caf35a43f22b5bf2faace9b945e +INFO:root:PassingDataObject: nmdc:82de6e9679c7d42e0ac1f58e06630d54 +INFO:root:PassingDataObject: nmdc:4a55d13b3dbf537c5709941bb501307e INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, Annotation Activity for nmdc:mga08009 -INFO:root:PassingDataObject: nmdc:536c17664c1a45cd6086525028826cf7 +INFO:root:PassingDataObject: nmdc:0e92cd09969bca7ac9c3d75b1d146f1d +INFO:root:PassingDataObject: nmdc:f1bb07a73b66679b752661d67752e354 INFO:root:PassingDataObject: nmdc:514f21f74b94bd36a18396b244e00139 +INFO:root:PassingDataObject: nmdc:ae8a827a866c1338eba610ae6751a174 +INFO:root:PassingDataObject: nmdc:62babb9123429fa0f87a9ee75e93ed06 INFO:root:PassingDataObject: nmdc:dc3910c447f6d208086204d31bdb9401 -INFO:root:PassingDataObject: nmdc:f3b9dd8a591e635117d60e8356afccac -INFO:root:PassingDataObject: nmdc:ac5ac14ab247bafb39400a32336c91bc -INFO:root:PassingDataObject: nmdc:8f86bf253e2ff2feab4b54db8173300b INFO:root:PassingDataObject: nmdc:dbce3ab36b3d755023a083854828eca1 -INFO:root:PassingDataObject: nmdc:0e92cd09969bca7ac9c3d75b1d146f1d INFO:root:PassingDataObject: nmdc:593fae969a7e77abf1683291f5d792ad +INFO:root:PassingDataObject: nmdc:a1302d4a083adaad041ab29594b68acd +INFO:root:PassingDataObject: nmdc:a53f24a100986f060f2efef6b4a1045a INFO:root:PassingDataObject: nmdc:7a27a876b2ea7ba1e7c64ac9bc19a984 -INFO:root:PassingDataObject: nmdc:cfe10e4da0b8e37a0c89238f76e15b13 +INFO:root:PassingDataObject: nmdc:bb9500da1f8a446a5799a55a86a16892 +INFO:root:PassingDataObject: nmdc:536c17664c1a45cd6086525028826cf7 +INFO:root:PassingDataObject: nmdc:f3b9dd8a591e635117d60e8356afccac +INFO:root:PassingDataObject: nmdc:8f86bf253e2ff2feab4b54db8173300b INFO:root:PassingDataObject: nmdc:a98f11553110997244111b88062974dc -INFO:root:PassingDataObject: nmdc:a1302d4a083adaad041ab29594b68acd +INFO:root:PassingDataObject: nmdc:ac5ac14ab247bafb39400a32336c91bc INFO:root:PassingDataObject: nmdc:25f7c37e51fd7c2bdd30350d67e1de22 -INFO:root:PassingDataObject: nmdc:f1bb07a73b66679b752661d67752e354 -INFO:root:PassingDataObject: nmdc:bb9500da1f8a446a5799a55a86a16892 -INFO:root:PassingDataObject: nmdc:62babb9123429fa0f87a9ee75e93ed06 -INFO:root:PassingDataObject: nmdc:ae8a827a866c1338eba610ae6751a174 -INFO:root:PassingDataObject: nmdc:a53f24a100986f060f2efef6b4a1045a +INFO:root:PassingDataObject: nmdc:cfe10e4da0b8e37a0c89238f76e15b13 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, MAGs Analysis Activity for nmdc:mga08009 -INFO:root:PassingDataObject: nmdc:f8c80a12ef32da13f515b806fc28046b INFO:root:PassingDataObject: nmdc:b31752abb3c017e572adaf70784704d2 +INFO:root:PassingDataObject: nmdc:f8c80a12ef32da13f515b806fc28046b INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213338 @@ -4986,63 +4986,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7f0c6c7be34ce22 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, Read QC Activity for nmdc:mga0ma88 -INFO:root:PassingDataObject: nmdc:cd59a03d1936c277c41633374a0cf06d INFO:root:PassingDataObject: nmdc:d199598f6ccfbe4194abf10379ce66a1 +INFO:root:PassingDataObject: nmdc:cd59a03d1936c277c41633374a0cf06d INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, ReadBased Analysis Activity for nmdc:mga0ma88 -INFO:root:PassingDataObject: nmdc:832c6e017ce77e8dfa710ad1d65b6c03 -INFO:root:PassingDataObject: nmdc:fd403a1c7ab421feeca3d5858b9bc4ab -INFO:root:PassingDataObject: nmdc:f18eed5d4249afa49805e301110be150 -INFO:root:PassingDataObject: nmdc:838feed210e675f80ea726f5c0a89927 INFO:root:PassingDataObject: nmdc:36db98ccafccefe424de6a9eaca9baa8 -INFO:root:PassingDataObject: nmdc:7cc9f39ac328dba5930d0c2c31d869c7 INFO:root:PassingDataObject: nmdc:e5abd608f71f5b1ab7c57679c58b564e +INFO:root:PassingDataObject: nmdc:fd403a1c7ab421feeca3d5858b9bc4ab +INFO:root:PassingDataObject: nmdc:7cc9f39ac328dba5930d0c2c31d869c7 INFO:root:PassingDataObject: nmdc:b68a50fcbb28e49af30ad5094f1621c1 +INFO:root:PassingDataObject: nmdc:838feed210e675f80ea726f5c0a89927 +INFO:root:PassingDataObject: nmdc:f18eed5d4249afa49805e301110be150 INFO:root:PassingDataObject: nmdc:3949585d6a27e0e4a58770c563674912 +INFO:root:PassingDataObject: nmdc:832c6e017ce77e8dfa710ad1d65b6c03 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, Assembly Activity for nmdc:mga0ma88 INFO:root:PassingDataObject: nmdc:7522a920a9afa2cb73f32515b31deca1 -INFO:root:PassingDataObject: nmdc:da69f52f5804b6ecff8da97142240f2f INFO:root:PassingDataObject: nmdc:e3f2d85d7569163784320b7d12f9ccc2 -INFO:root:PassingDataObject: nmdc:f91be7d590df595c0a752a020fca3e7e INFO:root:PassingDataObject: nmdc:1c69f65e09e27905cc8d3c31f063543b +INFO:root:PassingDataObject: nmdc:f91be7d590df595c0a752a020fca3e7e +INFO:root:PassingDataObject: nmdc:da69f52f5804b6ecff8da97142240f2f INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, Annotation Activity for nmdc:mga0ma88 +INFO:root:PassingDataObject: nmdc:d7a3e85057baa5b324a34912aa2f052d +INFO:root:PassingDataObject: nmdc:28c57c02d87921e249170a64d383b710 +INFO:root:PassingDataObject: nmdc:f5c9922ecbe462b412cf680897c0553d +INFO:root:PassingDataObject: nmdc:aa4d2c6e759ff8e0c2dff28dd9734bf7 +INFO:root:PassingDataObject: nmdc:2c2eca0d45f18273c34406ec0e7fd090 +INFO:root:PassingDataObject: nmdc:f3a5b69b57a90b68ca074219b7d51ff9 INFO:root:PassingDataObject: nmdc:f6b2b6852e2ea68756993a15482fb88e -INFO:root:PassingDataObject: nmdc:5dda91903813f796591d86b0354eb3a6 +INFO:root:PassingDataObject: nmdc:a0baa253958eb40aae088012691bd1f6 INFO:root:PassingDataObject: nmdc:f6a13e8a903ff33cf7ed18fda508fa31 -INFO:root:PassingDataObject: nmdc:751be9da214c2bd6428da593c10fbf54 -INFO:root:PassingDataObject: nmdc:8f24a7bca9979b7309f42321027b24a1 -INFO:root:PassingDataObject: nmdc:a872a3d8add4479ac4bdd393b0c4f160 -INFO:root:PassingDataObject: nmdc:e550da5bff482f714fa24170b6e3cf4c -INFO:root:PassingDataObject: nmdc:2a361f125dde65a02659685466588cb9 -INFO:root:PassingDataObject: nmdc:f5c9922ecbe462b412cf680897c0553d -INFO:root:PassingDataObject: nmdc:3442bf51152602bda76ebe61912a7400 INFO:root:PassingDataObject: nmdc:b4a8d4b6fd3b2fab6ff95abddb2e93de -INFO:root:PassingDataObject: nmdc:d7a3e85057baa5b324a34912aa2f052d -INFO:root:PassingDataObject: nmdc:a0baa253958eb40aae088012691bd1f6 INFO:root:PassingDataObject: nmdc:ff8414d8f2c3c0bb31e591e4771dd0e4 -INFO:root:PassingDataObject: nmdc:2c2eca0d45f18273c34406ec0e7fd090 INFO:root:PassingDataObject: nmdc:15fae9ee5e168c473e573c0f09bb68df -INFO:root:PassingDataObject: nmdc:28c57c02d87921e249170a64d383b710 -INFO:root:PassingDataObject: nmdc:aa4d2c6e759ff8e0c2dff28dd9734bf7 -INFO:root:PassingDataObject: nmdc:f3a5b69b57a90b68ca074219b7d51ff9 +INFO:root:PassingDataObject: nmdc:a872a3d8add4479ac4bdd393b0c4f160 +INFO:root:PassingDataObject: nmdc:e550da5bff482f714fa24170b6e3cf4c +INFO:root:PassingDataObject: nmdc:751be9da214c2bd6428da593c10fbf54 +INFO:root:PassingDataObject: nmdc:8f24a7bca9979b7309f42321027b24a1 +INFO:root:PassingDataObject: nmdc:3442bf51152602bda76ebe61912a7400 +INFO:root:PassingDataObject: nmdc:2a361f125dde65a02659685466588cb9 +INFO:root:PassingDataObject: nmdc:5dda91903813f796591d86b0354eb3a6 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, MAGs Analysis Activity for nmdc:mga0ma88 -INFO:root:PassingDataObject: nmdc:b508db66c2475de50b29fd4cf50d053f INFO:root:PassingDataObject: nmdc:24893f35076024112c59e0ece01db84b +INFO:root:PassingDataObject: nmdc:b508db66c2475de50b29fd4cf50d053f INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213346 @@ -5054,22 +5054,22 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:5e84dfde0d63289 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, Read QC Activity for nmdc:mga00h47 -INFO:root:PassingDataObject: nmdc:34fdc5db1d8e2cd22678cfba63187ebb INFO:root:PassingDataObject: nmdc:7ef54b43368bb21e4bafe6512b693760 +INFO:root:PassingDataObject: nmdc:34fdc5db1d8e2cd22678cfba63187ebb INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, ReadBased Analysis Activity for nmdc:mga00h47 -INFO:root:PassingDataObject: nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 +INFO:root:PassingDataObject: nmdc:5e4bc9e2005f6c6e74c8414edea24420 INFO:root:PassingDataObject: nmdc:90b469897a00f34db51efab16f076189 -INFO:root:PassingDataObject: nmdc:c31bb7727915abb60531b5f1d6ebe078 -INFO:root:PassingDataObject: nmdc:4e01d9eff79cc154c9f4020eaf5d2264 INFO:root:PassingDataObject: nmdc:798a9e4ea0aeaf42662474256caa2933 -INFO:root:PassingDataObject: nmdc:812af0a1cf69a1241225e79a056099e3 -INFO:root:PassingDataObject: nmdc:5e4bc9e2005f6c6e74c8414edea24420 +INFO:root:PassingDataObject: nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 INFO:root:PassingDataObject: nmdc:0bd7f6549ae98f5ee74ee57b77018ccd +INFO:root:PassingDataObject: nmdc:4e01d9eff79cc154c9f4020eaf5d2264 +INFO:root:PassingDataObject: nmdc:c31bb7727915abb60531b5f1d6ebe078 INFO:root:PassingDataObject: nmdc:e47c2276096e22b1b5b38f3fa1aff710 +INFO:root:PassingDataObject: nmdc:812af0a1cf69a1241225e79a056099e3 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213343 @@ -5085,32 +5085,32 @@ INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, Annotation Activity for nmdc:mga00h47 +INFO:root:PassingDataObject: nmdc:4220261037cbc503f9ba1178ab559851 INFO:root:PassingDataObject: nmdc:266a81db6f3fa700b5b59984cf619157 -INFO:root:PassingDataObject: nmdc:4fe58a6cb68015b2032828eb073297bb -INFO:root:PassingDataObject: nmdc:b7d0444e5e33f387010fa5124f9d3267 +INFO:root:PassingDataObject: nmdc:870b8c90759c93c66a128551d3f5245e INFO:root:PassingDataObject: nmdc:6d788fa570962f32cd9ad19399f23695 -INFO:root:PassingDataObject: nmdc:a009722f196801c02b8e7b317db93c4d INFO:root:PassingDataObject: nmdc:5a894f6f6b745e9b37b04c256abf6d23 -INFO:root:PassingDataObject: nmdc:f02b430f4ecda7b7d84762f215b15eaf INFO:root:PassingDataObject: nmdc:39b42aa9d6ba477ea19ff9451d71671e -INFO:root:PassingDataObject: nmdc:2fa6b5aa2f29b9df9779cf78d00ff0f0 INFO:root:PassingDataObject: nmdc:4c0289c73638e86f03b8f6d8c238a887 +INFO:root:PassingDataObject: nmdc:f02b430f4ecda7b7d84762f215b15eaf +INFO:root:PassingDataObject: nmdc:b7d0444e5e33f387010fa5124f9d3267 +INFO:root:PassingDataObject: nmdc:e5c5ee95721e739f888c8c5f8d359bdd +INFO:root:PassingDataObject: nmdc:f515a69c1ecb7d87e1332372a24bb905 INFO:root:PassingDataObject: nmdc:bafd87dd67b4572808d68b581612c561 -INFO:root:PassingDataObject: nmdc:870b8c90759c93c66a128551d3f5245e +INFO:root:PassingDataObject: nmdc:4fe58a6cb68015b2032828eb073297bb +INFO:root:PassingDataObject: nmdc:b503a59da2e4d9a32346843b998af723 INFO:root:PassingDataObject: nmdc:71dd24450339bb718f5f537887a42f60 -INFO:root:PassingDataObject: nmdc:4220261037cbc503f9ba1178ab559851 INFO:root:PassingDataObject: nmdc:d6958f78e9ded16f76bba2b84b04b645 +INFO:root:PassingDataObject: nmdc:a009722f196801c02b8e7b317db93c4d +INFO:root:PassingDataObject: nmdc:2fa6b5aa2f29b9df9779cf78d00ff0f0 INFO:root:PassingDataObject: nmdc:0ce4105bc341a2ccd2be9767a8ab5bea -INFO:root:PassingDataObject: nmdc:f515a69c1ecb7d87e1332372a24bb905 -INFO:root:PassingDataObject: nmdc:e5c5ee95721e739f888c8c5f8d359bdd -INFO:root:PassingDataObject: nmdc:b503a59da2e4d9a32346843b998af723 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, MAGs Analysis Activity for nmdc:mga00h47 -INFO:root:PassingDataObject: nmdc:ead5305e309f5fe59114f83b18269628 INFO:root:PassingDataObject: nmdc:3fb4712a1bbcb905fab4005bbf3bf03f +INFO:root:PassingDataObject: nmdc:ead5305e309f5fe59114f83b18269628 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213343 @@ -5122,21 +5122,21 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2f05dd5770ff3eb INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, Read QC Activity for nmdc:mga0af63 -INFO:root:PassingDataObject: nmdc:aecbb2d36dffa69932bc7cee73b736dd INFO:root:PassingDataObject: nmdc:cbc8fa5c109892ae9f37600c2b65094e +INFO:root:PassingDataObject: nmdc:aecbb2d36dffa69932bc7cee73b736dd INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, ReadBased Analysis Activity for nmdc:mga0af63 -INFO:root:PassingDataObject: nmdc:1468a245ca107e50d13a8d0e4c27873b INFO:root:PassingDataObject: nmdc:8d8b90d287099ef930cb6dfeba99d139 INFO:root:PassingDataObject: nmdc:3d500fe8a69a9c8f0ff0146fa7cb3eb3 -INFO:root:PassingDataObject: nmdc:9ebb73c3378e1e19f3aaa4c6ad67bd6a INFO:root:PassingDataObject: nmdc:c800a33e5b7cd800bced9c60bcaecf60 -INFO:root:PassingDataObject: nmdc:5a7c3677e5b3c64144a89bf1e2ed6a21 -INFO:root:PassingDataObject: nmdc:c05680de421aa177499f29588804100f ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 +ERROR:root:FailedDataObject: nmdc:5a7c3677e5b3c64144a89bf1e2ed6a21, +ERROR:root:FailedDataObject: nmdc:c05680de421aa177499f29588804100f, +ERROR:root:FailedDataObject: nmdc:9ebb73c3378e1e19f3aaa4c6ad67bd6a, +ERROR:root:FailedDataObject: nmdc:1468a245ca107e50d13a8d0e4c27873b, ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, ReadBased Analysis Activity for nmdc:mga0af63 @@ -5144,35 +5144,35 @@ ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, Assembly Activity for nmdc:mga0af63 -INFO:root:PassingDataObject: nmdc:be1f0af45c3e6d5f8eec727320987b95 INFO:root:PassingDataObject: nmdc:ed641164309b15152dc25fbff08ec3e7 INFO:root:PassingDataObject: nmdc:8a11794842326ebb25fc702b5862395b -INFO:root:PassingDataObject: nmdc:f55760dd8a7d7701ffb33e6b89cd0210 +INFO:root:PassingDataObject: nmdc:be1f0af45c3e6d5f8eec727320987b95 INFO:root:PassingDataObject: nmdc:545ac8cf12280a833c30b9de5171c9de +INFO:root:PassingDataObject: nmdc:f55760dd8a7d7701ffb33e6b89cd0210 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, Annotation Activity for nmdc:mga0af63 -INFO:root:PassingDataObject: nmdc:c21bedf7af864c3788890730d357c37f -INFO:root:PassingDataObject: nmdc:c5ebee15af85d376bd82e94130291c9e -INFO:root:PassingDataObject: nmdc:d83dac7dec831e494340e6cca8d8459b -INFO:root:PassingDataObject: nmdc:c177f3673278f0692e96f0f07f79b288 -INFO:root:PassingDataObject: nmdc:a8b5b2ec2957b68fd46c1fbf1d81deb8 -INFO:root:PassingDataObject: nmdc:9b661d182fea51ca1e1c0f487117b967 -INFO:root:PassingDataObject: nmdc:b6c9bbe9fe12289730ce7c922430e51f -INFO:root:PassingDataObject: nmdc:7b27243f23143ba91caee06d77c09894 -INFO:root:PassingDataObject: nmdc:f4f54d144557bf69faca070ea249da01 -INFO:root:PassingDataObject: nmdc:03b306cd194144f6f0228ad611c62fb4 +INFO:root:PassingDataObject: nmdc:4696b9e27bedf3d851c99a148c458a6d INFO:root:PassingDataObject: nmdc:acb7ca437f527f807b5fce0364b62e50 INFO:root:PassingDataObject: nmdc:5a12441f0a84ca5f3642b080b324acc5 -INFO:root:PassingDataObject: nmdc:7f7d244793be54de347515752f0fe6e4 +INFO:root:PassingDataObject: nmdc:c21bedf7af864c3788890730d357c37f +INFO:root:PassingDataObject: nmdc:f4f54d144557bf69faca070ea249da01 +INFO:root:PassingDataObject: nmdc:b4a74be02d38947a83db8fe66b83e9ff +INFO:root:PassingDataObject: nmdc:b6c9bbe9fe12289730ce7c922430e51f +INFO:root:PassingDataObject: nmdc:d83dac7dec831e494340e6cca8d8459b INFO:root:PassingDataObject: nmdc:b36dad77310cf892873049f720c010ed INFO:root:PassingDataObject: nmdc:bacc77027d87fdafaf64d68ef813e89f INFO:root:PassingDataObject: nmdc:d096d406fe785acde69a72e9dbb8a049 -INFO:root:PassingDataObject: nmdc:b4a74be02d38947a83db8fe66b83e9ff +INFO:root:PassingDataObject: nmdc:c5ebee15af85d376bd82e94130291c9e +INFO:root:PassingDataObject: nmdc:03b306cd194144f6f0228ad611c62fb4 INFO:root:PassingDataObject: nmdc:b3a9efdad3f7b3cc4f1e94db7cbac42b -INFO:root:PassingDataObject: nmdc:4696b9e27bedf3d851c99a148c458a6d +INFO:root:PassingDataObject: nmdc:c177f3673278f0692e96f0f07f79b288 +INFO:root:PassingDataObject: nmdc:7f7d244793be54de347515752f0fe6e4 +INFO:root:PassingDataObject: nmdc:a8b5b2ec2957b68fd46c1fbf1d81deb8 +INFO:root:PassingDataObject: nmdc:9b661d182fea51ca1e1c0f487117b967 +INFO:root:PassingDataObject: nmdc:7b27243f23143ba91caee06d77c09894 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213344 @@ -5191,63 +5191,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f9f1ddf2e1eca8e INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, Read QC Activity for nmdc:mga05491 -INFO:root:PassingDataObject: nmdc:8fc52f9de8c540cc0edac30c0f81dc61 INFO:root:PassingDataObject: nmdc:5a867d66faabc1e340c31bb9c882127c +INFO:root:PassingDataObject: nmdc:8fc52f9de8c540cc0edac30c0f81dc61 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, ReadBased Analysis Activity for nmdc:mga05491 INFO:root:PassingDataObject: nmdc:3bee4b758e80e4e4d8829bebf0618b13 -INFO:root:PassingDataObject: nmdc:41541759a6d5f17b651f851dc9b6192a +INFO:root:PassingDataObject: nmdc:82fe4e5311a521d5271e11cfec7e944e INFO:root:PassingDataObject: nmdc:c523105f854b6ebdb0b90d69e331f3c4 -INFO:root:PassingDataObject: nmdc:06407789c5f04cfe027601a08b26e2d1 -INFO:root:PassingDataObject: nmdc:cd58622718f0251e0cb9f3736ca3ec90 +INFO:root:PassingDataObject: nmdc:ea9e507877edf55b3534beff2f8ce84f INFO:root:PassingDataObject: nmdc:06cbbccb88f0f4f2c5ed159061c5c65d +INFO:root:PassingDataObject: nmdc:06407789c5f04cfe027601a08b26e2d1 INFO:root:PassingDataObject: nmdc:24b21fa9194d3821932ea688976f1cdc -INFO:root:PassingDataObject: nmdc:82fe4e5311a521d5271e11cfec7e944e -INFO:root:PassingDataObject: nmdc:ea9e507877edf55b3534beff2f8ce84f +INFO:root:PassingDataObject: nmdc:cd58622718f0251e0cb9f3736ca3ec90 +INFO:root:PassingDataObject: nmdc:41541759a6d5f17b651f851dc9b6192a INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, Assembly Activity for nmdc:mga05491 -INFO:root:PassingDataObject: nmdc:8d5bd20077c9f68e5434d4eb145b5235 -INFO:root:PassingDataObject: nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 -INFO:root:PassingDataObject: nmdc:c1c52c10f78dd6ad514095c836994704 -INFO:root:PassingDataObject: nmdc:367c3d138dbf10c772b48853b08bda60 INFO:root:PassingDataObject: nmdc:6a9b318266bbf9747202ee6b19d163c5 +INFO:root:PassingDataObject: nmdc:367c3d138dbf10c772b48853b08bda60 +INFO:root:PassingDataObject: nmdc:c1c52c10f78dd6ad514095c836994704 +INFO:root:PassingDataObject: nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 +INFO:root:PassingDataObject: nmdc:8d5bd20077c9f68e5434d4eb145b5235 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, Annotation Activity for nmdc:mga05491 -INFO:root:PassingDataObject: nmdc:f17371ab01888c8cdc6001d76244ab4d -INFO:root:PassingDataObject: nmdc:297ee366f81b21488cf0f89fb5fda905 -INFO:root:PassingDataObject: nmdc:4661a4d9ccbacae49c588902f41f010c +INFO:root:PassingDataObject: nmdc:1c2686170f4b3572ce7b643a17f9c748 +INFO:root:PassingDataObject: nmdc:a688b4a9ecf998ce9da4abe816bac47a +INFO:root:PassingDataObject: nmdc:4fa28621f01a913cdd5361dccb15c556 +INFO:root:PassingDataObject: nmdc:c398d4e656322c5d16cd055f458b38bd +INFO:root:PassingDataObject: nmdc:b15d266d0c63f6eefffe775fe5f1dc80 +INFO:root:PassingDataObject: nmdc:f98fea47b9125f3673152b245bf88980 +INFO:root:PassingDataObject: nmdc:d8da110a04f81f60a19cbb112fc29532 +INFO:root:PassingDataObject: nmdc:0bbd846eb025a9dec11fac75ce1ec664 INFO:root:PassingDataObject: nmdc:7faa73c98c45b6f173ad33c48fe84890 -INFO:root:PassingDataObject: nmdc:60c6f6c19e71620442b49947d8bcd4ac INFO:root:PassingDataObject: nmdc:b718b8805796c0fe8c0cee6e1de86e12 +INFO:root:PassingDataObject: nmdc:bb23bf2cd7d3cac93c393038ac2769ba +INFO:root:PassingDataObject: nmdc:297ee366f81b21488cf0f89fb5fda905 +INFO:root:PassingDataObject: nmdc:a66a567df7054a1682f19ffbd46e80f4 +INFO:root:PassingDataObject: nmdc:4661a4d9ccbacae49c588902f41f010c INFO:root:PassingDataObject: nmdc:dcdf93d0eeca2df3f94cc7b043011a23 +INFO:root:PassingDataObject: nmdc:f17371ab01888c8cdc6001d76244ab4d +INFO:root:PassingDataObject: nmdc:60c6f6c19e71620442b49947d8bcd4ac INFO:root:PassingDataObject: nmdc:7e30e73338b75d6b5124d3c92585b7ae -INFO:root:PassingDataObject: nmdc:a66a567df7054a1682f19ffbd46e80f4 -INFO:root:PassingDataObject: nmdc:f98fea47b9125f3673152b245bf88980 -INFO:root:PassingDataObject: nmdc:bb23bf2cd7d3cac93c393038ac2769ba -INFO:root:PassingDataObject: nmdc:d8da110a04f81f60a19cbb112fc29532 -INFO:root:PassingDataObject: nmdc:0bbd846eb025a9dec11fac75ce1ec664 -INFO:root:PassingDataObject: nmdc:c398d4e656322c5d16cd055f458b38bd -INFO:root:PassingDataObject: nmdc:1c2686170f4b3572ce7b643a17f9c748 -INFO:root:PassingDataObject: nmdc:4fa28621f01a913cdd5361dccb15c556 -INFO:root:PassingDataObject: nmdc:a688b4a9ecf998ce9da4abe816bac47a -INFO:root:PassingDataObject: nmdc:b15d266d0c63f6eefffe775fe5f1dc80 INFO:root:PassingDataObject: nmdc:3aa866d7cfc4d9e59c47b9e458cbc9ed INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, MAGs Analysis Activity for nmdc:mga05491 -INFO:root:PassingDataObject: nmdc:c15d6e00b87729eb7211dfbbd219d9e3 INFO:root:PassingDataObject: nmdc:3722d7c2d6d9c1dc8fca675606864570 +INFO:root:PassingDataObject: nmdc:c15d6e00b87729eb7211dfbbd219d9e3 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213347 @@ -5266,49 +5266,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213348 INFO:root:found 1 records INFO:root:record: nmdc:d6b63e3a46732091d898cf437faff699, ReadBased Analysis Activity for nmdc:mga05r31 -INFO:root:PassingDataObject: nmdc:37556f9d6d9e076d3a4ff7351de59195 INFO:root:PassingDataObject: nmdc:aab0ffee88319927d99955503be5d25c -INFO:root:PassingDataObject: nmdc:cd67787fdedef21e1dae8d0273a2954e +INFO:root:PassingDataObject: nmdc:aec249c35e1c7db4d0295823c2473ce4 INFO:root:PassingDataObject: nmdc:0ad4e158d9409664f353c759d104cd03 -INFO:root:PassingDataObject: nmdc:9aff0c76859be07434ad33c701355628 INFO:root:PassingDataObject: nmdc:e8a37758c99f077a094b8f0bee3e3084 -INFO:root:PassingDataObject: nmdc:abfda82b829a6f486e2e4357eae04617 INFO:root:PassingDataObject: nmdc:f9feb6472b82630a835d826cddf6d372 -INFO:root:PassingDataObject: nmdc:aec249c35e1c7db4d0295823c2473ce4 +INFO:root:PassingDataObject: nmdc:cd67787fdedef21e1dae8d0273a2954e +INFO:root:PassingDataObject: nmdc:37556f9d6d9e076d3a4ff7351de59195 +INFO:root:PassingDataObject: nmdc:9aff0c76859be07434ad33c701355628 +INFO:root:PassingDataObject: nmdc:abfda82b829a6f486e2e4357eae04617 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213348 INFO:root:found 1 records INFO:root:record: nmdc:d6b63e3a46732091d898cf437faff699, Assembly Activity for nmdc:mga05r31 -INFO:root:PassingDataObject: nmdc:89bc146abfc7fd7200250a905c714d15 INFO:root:PassingDataObject: nmdc:4e427ceb17df98fa3c9138ecfefb163b -INFO:root:PassingDataObject: nmdc:ed1b19ad42494558c2fff1fc35f2afa9 +INFO:root:PassingDataObject: nmdc:89bc146abfc7fd7200250a905c714d15 INFO:root:PassingDataObject: nmdc:85e71c34e863288c6036796051bf7123 INFO:root:PassingDataObject: nmdc:7335d465520b07babf5397dfe9633945 +INFO:root:PassingDataObject: nmdc:ed1b19ad42494558c2fff1fc35f2afa9 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213348 INFO:root:found 1 records INFO:root:record: nmdc:d6b63e3a46732091d898cf437faff699, Annotation Activity for nmdc:mga05r31 -INFO:root:PassingDataObject: nmdc:3789b331f8b2b6e5174824dceee85156 -INFO:root:PassingDataObject: nmdc:c85a08150ec6eaf45a7878d525e6d95e -INFO:root:PassingDataObject: nmdc:29dbd11583f29e40dc055024391c9cc1 -INFO:root:PassingDataObject: nmdc:de50781accf546c0416a160f09f29d0e -INFO:root:PassingDataObject: nmdc:4cff8b1c6210993e9903bfaca5aacc44 -INFO:root:PassingDataObject: nmdc:71dec20427ca024c2489a303318711d9 INFO:root:PassingDataObject: nmdc:07574effad1b02b13f7dc2a061cb77c6 -INFO:root:PassingDataObject: nmdc:e20b8276f77b2363f90c90c63bb59bfb INFO:root:PassingDataObject: nmdc:acb76bf3ef490c6bbdf0bb9dc1948f2e -INFO:root:PassingDataObject: nmdc:765ef32dcb1f7bd78cb1b930c4953fad +INFO:root:PassingDataObject: nmdc:190ecc0b1994640e69915a4c7a8e49a4 INFO:root:PassingDataObject: nmdc:aacf4d8a1be61fff6bc337a49b6e1b0e -INFO:root:PassingDataObject: nmdc:4b02c688ab11eb1d19eabe6662de669e -INFO:root:PassingDataObject: nmdc:8c18231cba69f4ab65964197ed1d581b +INFO:root:PassingDataObject: nmdc:c85a08150ec6eaf45a7878d525e6d95e +INFO:root:PassingDataObject: nmdc:71dec20427ca024c2489a303318711d9 +INFO:root:PassingDataObject: nmdc:b7b4152addfaeec51101ecd62585cb73 INFO:root:PassingDataObject: nmdc:d1155d2eb271f5b1064aa7663c818d1b INFO:root:PassingDataObject: nmdc:7820dc2857dd6cd59cec8955c3b612b2 +INFO:root:PassingDataObject: nmdc:765ef32dcb1f7bd78cb1b930c4953fad INFO:root:PassingDataObject: nmdc:89fe925b0f6db97fc178d6411178b6ad +INFO:root:PassingDataObject: nmdc:29dbd11583f29e40dc055024391c9cc1 +INFO:root:PassingDataObject: nmdc:4cff8b1c6210993e9903bfaca5aacc44 +INFO:root:PassingDataObject: nmdc:3789b331f8b2b6e5174824dceee85156 +INFO:root:PassingDataObject: nmdc:8c18231cba69f4ab65964197ed1d581b +INFO:root:PassingDataObject: nmdc:e20b8276f77b2363f90c90c63bb59bfb +INFO:root:PassingDataObject: nmdc:4b02c688ab11eb1d19eabe6662de669e INFO:root:PassingDataObject: nmdc:1e0d585519819d8941592c3dd7007044 -INFO:root:PassingDataObject: nmdc:b7b4152addfaeec51101ecd62585cb73 -INFO:root:PassingDataObject: nmdc:190ecc0b1994640e69915a4c7a8e49a4 +INFO:root:PassingDataObject: nmdc:de50781accf546c0416a160f09f29d0e INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213348 @@ -5335,55 +5335,55 @@ INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, ReadBased Analysis Activity for nmdc:mga0tf79 INFO:root:PassingDataObject: nmdc:e6bee0593905a7f060c05197c1db8c5b -INFO:root:PassingDataObject: nmdc:226525a4b5a49e3df4b7318918074a5b INFO:root:PassingDataObject: nmdc:43d0e628b153f69958ca1b9ddf2b632e INFO:root:PassingDataObject: nmdc:8e3d33b96dc2b39b2b0a4f498df1c982 INFO:root:PassingDataObject: nmdc:c962c7cbed3aa54888789be8bb96b815 -INFO:root:PassingDataObject: nmdc:b99f97eda4950f6289cddd8954c39f96 +INFO:root:PassingDataObject: nmdc:226525a4b5a49e3df4b7318918074a5b INFO:root:PassingDataObject: nmdc:96ae41661f13057c768c8bce130b48f4 -INFO:root:PassingDataObject: nmdc:cb88401ee8248955c07828fbf2f55eca +INFO:root:PassingDataObject: nmdc:b99f97eda4950f6289cddd8954c39f96 INFO:root:PassingDataObject: nmdc:655b130e00d0a38b1ad9663651ff0fee +INFO:root:PassingDataObject: nmdc:cb88401ee8248955c07828fbf2f55eca INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, Assembly Activity for nmdc:mga0tf79 -INFO:root:PassingDataObject: nmdc:288461f14e244e9f8a682bbc35ad3d06 INFO:root:PassingDataObject: nmdc:47ff7457e64164dac8314f289862f0c9 -INFO:root:PassingDataObject: nmdc:736ab7919817f20385ef3a332567902c +INFO:root:PassingDataObject: nmdc:288461f14e244e9f8a682bbc35ad3d06 INFO:root:PassingDataObject: nmdc:184bc1165d1a3ba37520f4b2846f3293 INFO:root:PassingDataObject: nmdc:cc641532c09acc9622a197f6420d2fcc +INFO:root:PassingDataObject: nmdc:736ab7919817f20385ef3a332567902c INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, Annotation Activity for nmdc:mga0tf79 -INFO:root:PassingDataObject: nmdc:5526bc0f5226a04ae861a1b092eacc2e +INFO:root:PassingDataObject: nmdc:59eeac13ed2b927bb326d52be8fc2591 +INFO:root:PassingDataObject: nmdc:fd025564e14719be1cfecf7d1366bb62 +INFO:root:PassingDataObject: nmdc:26091c8d5fa8cf3775046535892daaf0 INFO:root:PassingDataObject: nmdc:aab7460b53e4142d2f8c4ec69c9e25af -INFO:root:PassingDataObject: nmdc:a074be16ed62b8fa82619432732722a3 -INFO:root:PassingDataObject: nmdc:59374c01e790e264bad659a712109006 +INFO:root:PassingDataObject: nmdc:df6e5b2691e77756f3f8a8a0637ca36d +INFO:root:PassingDataObject: nmdc:19cd08cb4cd51ac0576e093a895b3000 INFO:root:PassingDataObject: nmdc:bb1dd9c64dc2a25ceda491bee6fc3f92 -INFO:root:PassingDataObject: nmdc:f37059e19f997a60c74a66179bd2780d -INFO:root:PassingDataObject: nmdc:659683ecb494d193b78ea26e5b201d8b -INFO:root:PassingDataObject: nmdc:26091c8d5fa8cf3775046535892daaf0 +INFO:root:PassingDataObject: nmdc:1dc51f2d06de6fd49c2517f19a5918d4 INFO:root:PassingDataObject: nmdc:383f0b129c35ca814505892b463d9c7c +INFO:root:PassingDataObject: nmdc:5526bc0f5226a04ae861a1b092eacc2e INFO:root:PassingDataObject: nmdc:ac72326277a24e15de3eca0299f80610 -INFO:root:PassingDataObject: nmdc:1dc51f2d06de6fd49c2517f19a5918d4 -INFO:root:PassingDataObject: nmdc:6d473a271f41bb6f433cea28d299fbbd -INFO:root:PassingDataObject: nmdc:df6e5b2691e77756f3f8a8a0637ca36d INFO:root:PassingDataObject: nmdc:1e8fbe72694a0d02c82f7af2b7a1861a +INFO:root:PassingDataObject: nmdc:6d473a271f41bb6f433cea28d299fbbd +INFO:root:PassingDataObject: nmdc:a074be16ed62b8fa82619432732722a3 +INFO:root:PassingDataObject: nmdc:f37059e19f997a60c74a66179bd2780d +INFO:root:PassingDataObject: nmdc:659683ecb494d193b78ea26e5b201d8b INFO:root:PassingDataObject: nmdc:aeba2cabcc7af462e8a6fef02d7bdcb8 -INFO:root:PassingDataObject: nmdc:fd025564e14719be1cfecf7d1366bb62 -INFO:root:PassingDataObject: nmdc:59eeac13ed2b927bb326d52be8fc2591 INFO:root:PassingDataObject: nmdc:bdf911f9d922c14c19310ee6ad484461 -INFO:root:PassingDataObject: nmdc:19cd08cb4cd51ac0576e093a895b3000 +INFO:root:PassingDataObject: nmdc:59374c01e790e264bad659a712109006 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, MAGs Analysis Activity for nmdc:mga0tf79 -INFO:root:PassingDataObject: nmdc:f8c8ff0b3b58338175a389564e3ba706 INFO:root:PassingDataObject: nmdc:888d686e8dc1bc1ae54c2e1aa24828d6 +INFO:root:PassingDataObject: nmdc:f8c8ff0b3b58338175a389564e3ba706 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213345 @@ -5402,15 +5402,15 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, ReadBased Analysis Activity for nmdc:mga06d65 -INFO:root:PassingDataObject: nmdc:4793f08b0984e59d9654b0e84b7c4964 -INFO:root:PassingDataObject: nmdc:57510c34441755cac37e45ceef026e26 INFO:root:PassingDataObject: nmdc:ccfe5635bfcc535acbbc7b9677963ebb +INFO:root:PassingDataObject: nmdc:4b1fffbdc4130dfc262cbab3b7ef94e3 +INFO:root:PassingDataObject: nmdc:810f3a23fe6861a24397cec5a7635f65 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:4a43bf91c943db8e9829ea992c576c8e -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:4a43bf91c943db8e9829ea992c576c8e ERROR:root:FailedDataObject: nmdc:fbfc3556f0b6b81127dccdd0fbb319aa, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:4a43bf91c943db8e9829ea992c576c8e +ERROR:root:FailedDataObject: nmdc:4793f08b0984e59d9654b0e84b7c4964, +ERROR:root:FailedDataObject: nmdc:57510c34441755cac37e45ceef026e26, ERROR:root:FailedDataObject: nmdc:98c72b11c04b1c9c5b65c03a7e827136, -ERROR:root:FailedDataObject: nmdc:810f3a23fe6861a24397cec5a7635f65, -ERROR:root:FailedDataObject: nmdc:4b1fffbdc4130dfc262cbab3b7ef94e3, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4a43bf91c943db8e9829ea992c576c8e, ReadBased Analysis Activity for nmdc:mga06d65 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 @@ -5418,41 +5418,41 @@ INFO:root:set_name: metagenome_assembly_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, Assembly Activity for nmdc:mga06d65 INFO:root:PassingDataObject: nmdc:9abbaf8bb8ec0d8f687d25a01e4ba8c7 -INFO:root:PassingDataObject: nmdc:d22adbc2f694c0fe06081271f2d70414 INFO:root:PassingDataObject: nmdc:552e73866c3a9542daf7cbe9ecb4eb5e INFO:root:PassingDataObject: nmdc:0e39a861965a826732018e11da3523f9 INFO:root:PassingDataObject: nmdc:0af96b416a01858dbe3ebeebfab48515 +INFO:root:PassingDataObject: nmdc:d22adbc2f694c0fe06081271f2d70414 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, Annotation Activity for nmdc:mga06d65 +INFO:root:PassingDataObject: nmdc:c26e242c85c84c4a551677d162630e9c INFO:root:PassingDataObject: nmdc:2185aeb3431945770c41c9c90773228a +INFO:root:PassingDataObject: nmdc:d98d891de757a7c864b586be809256cc +INFO:root:PassingDataObject: nmdc:31434400394eaf33811db5150f5c3941 +INFO:root:PassingDataObject: nmdc:b9c270503753f8a36bdb7b7046ef0afd INFO:root:PassingDataObject: nmdc:00348e5dbcf8bb9e4ea9b0c9e156497a -INFO:root:PassingDataObject: nmdc:c26e242c85c84c4a551677d162630e9c INFO:root:PassingDataObject: nmdc:4d64faff842049476c2fcad82b7d15ef -INFO:root:PassingDataObject: nmdc:d95fff1dc925eaa80caa91ec28fe64a2 -INFO:root:PassingDataObject: nmdc:d98d891de757a7c864b586be809256cc INFO:root:PassingDataObject: nmdc:1234ad2d1d6afe3131f0551fe4b2ccc5 -INFO:root:PassingDataObject: nmdc:5aa8b16b1b229ce7a77ad4e766343db5 -INFO:root:PassingDataObject: nmdc:e70ac8a5591e8cfc872dfb3952dc30db -INFO:root:PassingDataObject: nmdc:31434400394eaf33811db5150f5c3941 +INFO:root:PassingDataObject: nmdc:f4e18b724ad426211b3f65297e1ba3da INFO:root:PassingDataObject: nmdc:212e84461983b91273e7c22367f71fbd +INFO:root:PassingDataObject: nmdc:e70ac8a5591e8cfc872dfb3952dc30db +INFO:root:PassingDataObject: nmdc:7bacc07acf81a5dd7d326ef7288a74a3 +INFO:root:PassingDataObject: nmdc:7c59e24c37b6c11c7511e2e092f649f4 +INFO:root:PassingDataObject: nmdc:5aa8b16b1b229ce7a77ad4e766343db5 INFO:root:PassingDataObject: nmdc:fd258347db9491861054c7f54290fa8b +INFO:root:PassingDataObject: nmdc:d95fff1dc925eaa80caa91ec28fe64a2 INFO:root:PassingDataObject: nmdc:17eb2ae07093309781aa7cf2c6954484 -INFO:root:PassingDataObject: nmdc:7c59e24c37b6c11c7511e2e092f649f4 -INFO:root:PassingDataObject: nmdc:f4e18b724ad426211b3f65297e1ba3da INFO:root:PassingDataObject: nmdc:c308a6ac7d22662f6ee2587820c40840 -INFO:root:PassingDataObject: nmdc:7bacc07acf81a5dd7d326ef7288a74a3 -INFO:root:PassingDataObject: nmdc:b9c270503753f8a36bdb7b7046ef0afd INFO:root:PassingDataObject: nmdc:124aa75b404036a1c982a28a1b76ebe8 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, MAGs Analysis Activity for nmdc:mga06d65 -INFO:root:PassingDataObject: nmdc:08836adbf8ab58383835621ee7315ac2 INFO:root:PassingDataObject: nmdc:6765b398ddcbd9fc61af7d2718133664 +INFO:root:PassingDataObject: nmdc:08836adbf8ab58383835621ee7315ac2 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213350 @@ -5464,63 +5464,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f4ddf238d2d7dec INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, Read QC Activity for nmdc:mga0px33 -INFO:root:PassingDataObject: nmdc:dc0fa28035cb17b7fa2b49660cdecd5d INFO:root:PassingDataObject: nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 +INFO:root:PassingDataObject: nmdc:dc0fa28035cb17b7fa2b49660cdecd5d INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, ReadBased Analysis Activity for nmdc:mga0px33 +INFO:root:PassingDataObject: nmdc:e57315a6742ed7a21b68d10570bb7247 +INFO:root:PassingDataObject: nmdc:eab271aef23285a71c50e411294fa674 INFO:root:PassingDataObject: nmdc:58310a3abb2fcde26fbc973721f7ab25 +INFO:root:PassingDataObject: nmdc:0c4414e23ae24e4c902673b6e271bb62 INFO:root:PassingDataObject: nmdc:313c08b83a542d886a3985d16fd1071c -INFO:root:PassingDataObject: nmdc:eab271aef23285a71c50e411294fa674 INFO:root:PassingDataObject: nmdc:bd5352c76241c60df60fd8e43e13208d -INFO:root:PassingDataObject: nmdc:e57315a6742ed7a21b68d10570bb7247 -INFO:root:PassingDataObject: nmdc:0c4414e23ae24e4c902673b6e271bb62 INFO:root:PassingDataObject: nmdc:023a447cc739b46db2c2eeb5d440c352 -INFO:root:PassingDataObject: nmdc:bfe90287f58a65b9232f177e7b8429ea INFO:root:PassingDataObject: nmdc:a0c25fe760f0f7569f9deec217cccb77 +INFO:root:PassingDataObject: nmdc:bfe90287f58a65b9232f177e7b8429ea INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, Assembly Activity for nmdc:mga0px33 -INFO:root:PassingDataObject: nmdc:2f1737d3cebfb958e3317a38a1b9638d -INFO:root:PassingDataObject: nmdc:5a1daf7eeeb3197f5ea7d9350f79ec8e -INFO:root:PassingDataObject: nmdc:582e46ab7e21c5151d7e01e33fa6fb0f INFO:root:PassingDataObject: nmdc:9273b988e3cd8a9ef33144e129834eca +INFO:root:PassingDataObject: nmdc:5a1daf7eeeb3197f5ea7d9350f79ec8e INFO:root:PassingDataObject: nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 +INFO:root:PassingDataObject: nmdc:2f1737d3cebfb958e3317a38a1b9638d +INFO:root:PassingDataObject: nmdc:582e46ab7e21c5151d7e01e33fa6fb0f INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, Annotation Activity for nmdc:mga0px33 -INFO:root:PassingDataObject: nmdc:a125bb8b838aed9da23a99d5b9ae26ed +INFO:root:PassingDataObject: nmdc:be50ee3509d61cbef8f8d99cac352d06 INFO:root:PassingDataObject: nmdc:0d75da6943d4d5be13b7bd0dbb23140f -INFO:root:PassingDataObject: nmdc:38f949bd0944ad2c8974759077a8125c INFO:root:PassingDataObject: nmdc:04cdb354b543805217f2fe6fcaac133b -INFO:root:PassingDataObject: nmdc:65fef4edd78a9d6818506d441066da4a -INFO:root:PassingDataObject: nmdc:f80a0b3ccd497d7fe0a0e6ab7c5532cb -INFO:root:PassingDataObject: nmdc:511fd901f2ae90fd2b37c4f860de6be8 -INFO:root:PassingDataObject: nmdc:5a3141601753b561c5cb4406c973277e -INFO:root:PassingDataObject: nmdc:be50ee3509d61cbef8f8d99cac352d06 -INFO:root:PassingDataObject: nmdc:bc99bf96c0a916d19298ebc8bc48371e -INFO:root:PassingDataObject: nmdc:0e81822d9ec58b61f6fd6aed11bac8aa INFO:root:PassingDataObject: nmdc:7b7555f05277536429e5e738f44147bb -INFO:root:PassingDataObject: nmdc:77e84043050c4290d9cc769e6adbb7b3 INFO:root:PassingDataObject: nmdc:a05e18287f6e5d47a3add87b58d7a590 INFO:root:PassingDataObject: nmdc:08cee96951c0101e8b8591f0c35fbe43 +INFO:root:PassingDataObject: nmdc:2b4a6684423acce5f0d07e08539249a1 +INFO:root:PassingDataObject: nmdc:bc99bf96c0a916d19298ebc8bc48371e +INFO:root:PassingDataObject: nmdc:77e84043050c4290d9cc769e6adbb7b3 INFO:root:PassingDataObject: nmdc:442d5c426c2d55c37268d0259978cfeb INFO:root:PassingDataObject: nmdc:94b93a12146e7927d7949844156dd0e7 -INFO:root:PassingDataObject: nmdc:2b4a6684423acce5f0d07e08539249a1 +INFO:root:PassingDataObject: nmdc:65fef4edd78a9d6818506d441066da4a +INFO:root:PassingDataObject: nmdc:a125bb8b838aed9da23a99d5b9ae26ed INFO:root:PassingDataObject: nmdc:47b5f56e36703d6b0f393dbdfac83a0d +INFO:root:PassingDataObject: nmdc:0e81822d9ec58b61f6fd6aed11bac8aa +INFO:root:PassingDataObject: nmdc:511fd901f2ae90fd2b37c4f860de6be8 +INFO:root:PassingDataObject: nmdc:38f949bd0944ad2c8974759077a8125c +INFO:root:PassingDataObject: nmdc:f80a0b3ccd497d7fe0a0e6ab7c5532cb +INFO:root:PassingDataObject: nmdc:5a3141601753b561c5cb4406c973277e INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, MAGs Analysis Activity for nmdc:mga0px33 -INFO:root:PassingDataObject: nmdc:8e5b1d0f4be9a3a3576fe083054b03f9 INFO:root:PassingDataObject: nmdc:1922bce699639591da0fbad61ffe0aa5 +INFO:root:PassingDataObject: nmdc:8e5b1d0f4be9a3a3576fe083054b03f9 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213349 @@ -5532,56 +5532,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4acac4ba90588c9 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, Read QC Activity for nmdc:mga05y13 -INFO:root:PassingDataObject: nmdc:79e13b5543b1c56a065b5b7205d05cc8 INFO:root:PassingDataObject: nmdc:b0ac82926897b31cf14de8d1b7499250 +INFO:root:PassingDataObject: nmdc:79e13b5543b1c56a065b5b7205d05cc8 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, ReadBased Analysis Activity for nmdc:mga05y13 -INFO:root:PassingDataObject: nmdc:26e7af846b354ab6f9b0d47037b6ed5d -INFO:root:PassingDataObject: nmdc:f6bac3ea3a4b8bab45b2f089c53b779f INFO:root:PassingDataObject: nmdc:eca839aa68f3f38e3cdf969dc6f13929 -INFO:root:PassingDataObject: nmdc:b6d41063251b5b35d3aa554d3f77f9c9 -INFO:root:PassingDataObject: nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 INFO:root:PassingDataObject: nmdc:6b362a17555a555ca280dc1a774d8257 -INFO:root:PassingDataObject: nmdc:2a4c879329a04e75907617d0ac606fbf -INFO:root:PassingDataObject: nmdc:4fe4f56c3c6533127e224c03f2691de4 +INFO:root:PassingDataObject: nmdc:f6bac3ea3a4b8bab45b2f089c53b779f +INFO:root:PassingDataObject: nmdc:26e7af846b354ab6f9b0d47037b6ed5d INFO:root:PassingDataObject: nmdc:0625ec7747b047894773ecfdd88f49da +INFO:root:PassingDataObject: nmdc:4fe4f56c3c6533127e224c03f2691de4 +INFO:root:PassingDataObject: nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 +INFO:root:PassingDataObject: nmdc:2a4c879329a04e75907617d0ac606fbf +INFO:root:PassingDataObject: nmdc:b6d41063251b5b35d3aa554d3f77f9c9 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, Assembly Activity for nmdc:mga05y13 -INFO:root:PassingDataObject: nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 -INFO:root:PassingDataObject: nmdc:5a7912ed567487e12d72e6ffe8737d9b +INFO:root:PassingDataObject: nmdc:a6f7572a276c5179f403be6dc6f1c6a4 INFO:root:PassingDataObject: nmdc:924abfaf7ce029d1c4f21f0ec9a26be4 +INFO:root:PassingDataObject: nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 INFO:root:PassingDataObject: nmdc:bcbd1a8e38b5b58ca2e25383e46bbe49 -INFO:root:PassingDataObject: nmdc:a6f7572a276c5179f403be6dc6f1c6a4 +INFO:root:PassingDataObject: nmdc:5a7912ed567487e12d72e6ffe8737d9b INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, Annotation Activity for nmdc:mga05y13 -INFO:root:PassingDataObject: nmdc:04095292bb8e05c5a1e66447ebb006c0 -INFO:root:PassingDataObject: nmdc:520aebc1f05a40afd6d8421ba2b4d82e -INFO:root:PassingDataObject: nmdc:2b167711053825c8a213bb64c6b70db5 -INFO:root:PassingDataObject: nmdc:cf75bad48bbaa4d770972c05b05529d1 -INFO:root:PassingDataObject: nmdc:3505bf810f727fbd23921910d1a453e8 +INFO:root:PassingDataObject: nmdc:cb73e36e7586d312dfac6cb83280e7fe +INFO:root:PassingDataObject: nmdc:fc4d1b8ff73748d17391f4505c269e47 INFO:root:PassingDataObject: nmdc:b894d2ddedfa1faf2b361adbc2086c32 +INFO:root:PassingDataObject: nmdc:e9f202103fbda234f3c1c5b0cfb8d533 +INFO:root:PassingDataObject: nmdc:fc3b12f7f52142f66325463bbada9201 +INFO:root:PassingDataObject: nmdc:b60bf1534600f6489c094d590d55cca7 INFO:root:PassingDataObject: nmdc:e16bffddf5589eeb4bb61a6b1971f69d +INFO:root:PassingDataObject: nmdc:cf8768c5e36d7d3e89e46b1b21ed0b61 +INFO:root:PassingDataObject: nmdc:cf75bad48bbaa4d770972c05b05529d1 INFO:root:PassingDataObject: nmdc:649c77a090f1779bf41252f3563dd74f -INFO:root:PassingDataObject: nmdc:e9f202103fbda234f3c1c5b0cfb8d533 -INFO:root:PassingDataObject: nmdc:fc4d1b8ff73748d17391f4505c269e47 -INFO:root:PassingDataObject: nmdc:cb73e36e7586d312dfac6cb83280e7fe -INFO:root:PassingDataObject: nmdc:d22b49eeaa63216bbd91b1b79a8220a0 INFO:root:PassingDataObject: nmdc:6ca53c86da3f3f5f503b4be7359bbf5c +INFO:root:PassingDataObject: nmdc:2b167711053825c8a213bb64c6b70db5 INFO:root:PassingDataObject: nmdc:29f36170b4131d150593aeee7fbd321c -INFO:root:PassingDataObject: nmdc:cf8768c5e36d7d3e89e46b1b21ed0b61 +INFO:root:PassingDataObject: nmdc:04095292bb8e05c5a1e66447ebb006c0 INFO:root:PassingDataObject: nmdc:c3f610a18471059c363e2e2acddef119 -INFO:root:PassingDataObject: nmdc:fc3b12f7f52142f66325463bbada9201 -INFO:root:PassingDataObject: nmdc:b60bf1534600f6489c094d590d55cca7 INFO:root:PassingDataObject: nmdc:93741b48a92c3c82aa89e3346883be26 +INFO:root:PassingDataObject: nmdc:d22b49eeaa63216bbd91b1b79a8220a0 +INFO:root:PassingDataObject: nmdc:520aebc1f05a40afd6d8421ba2b4d82e +INFO:root:PassingDataObject: nmdc:3505bf810f727fbd23921910d1a453e8 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213351 @@ -5607,49 +5607,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213352 INFO:root:found 1 records INFO:root:record: nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3, ReadBased Analysis Activity for nmdc:mga0hz22 +INFO:root:PassingDataObject: nmdc:caf1b3c45796d80e82846e2363001a2b +INFO:root:PassingDataObject: nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf INFO:root:PassingDataObject: nmdc:d034667d4d21b468a27705a25c77df36 +INFO:root:PassingDataObject: nmdc:bf41e7e39784afaaac797359815c2f81 INFO:root:PassingDataObject: nmdc:74094920c294e1906a83c34654619266 INFO:root:PassingDataObject: nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 -INFO:root:PassingDataObject: nmdc:373a1483931f9805a09a8e492f9a2392 INFO:root:PassingDataObject: nmdc:892782dc631a5581fcaf93bd5ccc473d -INFO:root:PassingDataObject: nmdc:bf41e7e39784afaaac797359815c2f81 +INFO:root:PassingDataObject: nmdc:373a1483931f9805a09a8e492f9a2392 INFO:root:PassingDataObject: nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 -INFO:root:PassingDataObject: nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf -INFO:root:PassingDataObject: nmdc:caf1b3c45796d80e82846e2363001a2b INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213352 INFO:root:found 1 records INFO:root:record: nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3, Assembly Activity for nmdc:mga0hz22 +INFO:root:PassingDataObject: nmdc:255f27df330491e4fdf0d8ac231c26b5 +INFO:root:PassingDataObject: nmdc:b0e3c146dfccbce97dbe291b8a1340cd INFO:root:PassingDataObject: nmdc:9e4887ca5a5d000d65beade012be35e7 INFO:root:PassingDataObject: nmdc:a7a83584cf2763994ff0eff2423bb4fd INFO:root:PassingDataObject: nmdc:1ed7caaf9ef411a27133ec7867fd0a76 -INFO:root:PassingDataObject: nmdc:255f27df330491e4fdf0d8ac231c26b5 -INFO:root:PassingDataObject: nmdc:b0e3c146dfccbce97dbe291b8a1340cd INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213352 INFO:root:found 1 records INFO:root:record: nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3, Annotation Activity for nmdc:mga0hz22 -INFO:root:PassingDataObject: nmdc:67027a731022539e4b1681caaf78591d -INFO:root:PassingDataObject: nmdc:7bbdacadba7bd98e99c23a5153432560 -INFO:root:PassingDataObject: nmdc:4745ac989eabfeed0724f539d25dc995 -INFO:root:PassingDataObject: nmdc:2d027fe168744dd5de5039115862f46d -INFO:root:PassingDataObject: nmdc:37b6c226d973dcf4c83a39562867bd47 -INFO:root:PassingDataObject: nmdc:3dee6d450e566764dc4d37db5fc9f0f0 -INFO:root:PassingDataObject: nmdc:d4d949f230b4b48571d8229abaa9f758 -INFO:root:PassingDataObject: nmdc:23b9aebb0ff160c8f92aebc71862a24d -INFO:root:PassingDataObject: nmdc:1a4e57034c6587d039dd84e48270bc96 -INFO:root:PassingDataObject: nmdc:c8070c837b70dd37060f7d3566869434 -INFO:root:PassingDataObject: nmdc:e60076329d836c44f7adc503bc0bf992 -INFO:root:PassingDataObject: nmdc:76b6e11d1639b90a2156a0a39a50c1e2 INFO:root:PassingDataObject: nmdc:e87664a0eb2e235a10409077b3609c17 +INFO:root:PassingDataObject: nmdc:c8070c837b70dd37060f7d3566869434 INFO:root:PassingDataObject: nmdc:711e6eb584fdcbf851ad581e56f5f91d -INFO:root:PassingDataObject: nmdc:c24d39b8614066cf9c084c9e9775efdd +INFO:root:PassingDataObject: nmdc:7bbdacadba7bd98e99c23a5153432560 +INFO:root:PassingDataObject: nmdc:641ea510c692582e538b22436028a967 INFO:root:PassingDataObject: nmdc:926df4f232ce997c633b56db48d9b3db +INFO:root:PassingDataObject: nmdc:4745ac989eabfeed0724f539d25dc995 +INFO:root:PassingDataObject: nmdc:3dee6d450e566764dc4d37db5fc9f0f0 +INFO:root:PassingDataObject: nmdc:2d027fe168744dd5de5039115862f46d INFO:root:PassingDataObject: nmdc:91fb8a81ca3b6f101e14a5d955884eb8 -INFO:root:PassingDataObject: nmdc:641ea510c692582e538b22436028a967 +INFO:root:PassingDataObject: nmdc:c24d39b8614066cf9c084c9e9775efdd +INFO:root:PassingDataObject: nmdc:d4d949f230b4b48571d8229abaa9f758 +INFO:root:PassingDataObject: nmdc:37b6c226d973dcf4c83a39562867bd47 +INFO:root:PassingDataObject: nmdc:23b9aebb0ff160c8f92aebc71862a24d +INFO:root:PassingDataObject: nmdc:e60076329d836c44f7adc503bc0bf992 INFO:root:PassingDataObject: nmdc:c96bddf44b5efbc92a3e9a3bf1ebcc40 +INFO:root:PassingDataObject: nmdc:76b6e11d1639b90a2156a0a39a50c1e2 +INFO:root:PassingDataObject: nmdc:67027a731022539e4b1681caaf78591d +INFO:root:PassingDataObject: nmdc:1a4e57034c6587d039dd84e48270bc96 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213352 @@ -5668,56 +5668,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:3900b15ebaa5ecb INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, Read QC Activity for nmdc:mga02p34 -INFO:root:PassingDataObject: nmdc:8010e289e2cbcb88dc55cae1c5082851 INFO:root:PassingDataObject: nmdc:1978062c63a0079d779f0f1a820296e7 +INFO:root:PassingDataObject: nmdc:8010e289e2cbcb88dc55cae1c5082851 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, ReadBased Analysis Activity for nmdc:mga02p34 +INFO:root:PassingDataObject: nmdc:d52e6df0a0986f444253392961e943d4 INFO:root:PassingDataObject: nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 +INFO:root:PassingDataObject: nmdc:c67283d3ccf71f511b8460b8c1cc692a INFO:root:PassingDataObject: nmdc:5108d260ae1b95d58f3706d35ccfb83f INFO:root:PassingDataObject: nmdc:640b149083a469e3075770a03c5d20e0 -INFO:root:PassingDataObject: nmdc:0bdeb595483c185c42c5245d53f2a0c7 -INFO:root:PassingDataObject: nmdc:c67283d3ccf71f511b8460b8c1cc692a INFO:root:PassingDataObject: nmdc:406855169336718091ad1e568e6fb418 INFO:root:PassingDataObject: nmdc:8ed5a5a06a47e85f77df6dab7a91039b -INFO:root:PassingDataObject: nmdc:d52e6df0a0986f444253392961e943d4 +INFO:root:PassingDataObject: nmdc:0bdeb595483c185c42c5245d53f2a0c7 INFO:root:PassingDataObject: nmdc:29d7979ce172e99795e2ba9f5b27ee22 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, Assembly Activity for nmdc:mga02p34 -INFO:root:PassingDataObject: nmdc:ebe16a3e4d650652f0a39e930872a158 INFO:root:PassingDataObject: nmdc:5475a070df52f1702058521b8ebfdd81 -INFO:root:PassingDataObject: nmdc:555814c0b6ca44e02f29d8bcc90b41bc INFO:root:PassingDataObject: nmdc:e986afe1a3c118ea3c98e4915839776a +INFO:root:PassingDataObject: nmdc:ebe16a3e4d650652f0a39e930872a158 INFO:root:PassingDataObject: nmdc:b52a8ce01e5e3e6ed03ab22e2d7a2bce +INFO:root:PassingDataObject: nmdc:555814c0b6ca44e02f29d8bcc90b41bc INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, Annotation Activity for nmdc:mga02p34 -INFO:root:PassingDataObject: nmdc:910f072bd72b9d20b385332929a4a3d7 -INFO:root:PassingDataObject: nmdc:e78e5989d12b059acaf52c24faee7a89 -INFO:root:PassingDataObject: nmdc:6d354ece43c376b66651115ec6016b28 -INFO:root:PassingDataObject: nmdc:7192b42dc620ce5f9f80399ae767665b -INFO:root:PassingDataObject: nmdc:7ccb383e1f7cb7e4da4eca5c1330f4b1 INFO:root:PassingDataObject: nmdc:5787f94387d5d8345d00ad16ced80afe -INFO:root:PassingDataObject: nmdc:aea76ea9592f718fa2e7c2ab2475efc2 +INFO:root:PassingDataObject: nmdc:f91be1136a6a514e6502e8ef148235f9 +INFO:root:PassingDataObject: nmdc:6d354ece43c376b66651115ec6016b28 INFO:root:PassingDataObject: nmdc:e5b00a076b91743f96f57fc8c4263166 -INFO:root:PassingDataObject: nmdc:52b3ef366869a7fc962e3c665fc257ff -INFO:root:PassingDataObject: nmdc:9704a507c5d9c9d6f4dc42bced330344 -INFO:root:PassingDataObject: nmdc:05dfd1ef6f25f05bf9d2a1c1234a64ec +INFO:root:PassingDataObject: nmdc:7ccb383e1f7cb7e4da4eca5c1330f4b1 INFO:root:PassingDataObject: nmdc:6695d7f64af5bd1e097c836704890f78 -INFO:root:PassingDataObject: nmdc:1f752ce445ebbcf515ae72f56d96b591 -INFO:root:PassingDataObject: nmdc:f91be1136a6a514e6502e8ef148235f9 -INFO:root:PassingDataObject: nmdc:36ec2d19c701e968959d478428e07a03 INFO:root:PassingDataObject: nmdc:a293d1b8d5d66ae5db1e668af1bea86a +INFO:root:PassingDataObject: nmdc:7192b42dc620ce5f9f80399ae767665b +INFO:root:PassingDataObject: nmdc:05dfd1ef6f25f05bf9d2a1c1234a64ec INFO:root:PassingDataObject: nmdc:542a918f4a84bc4df1c50fe7c511b642 -INFO:root:PassingDataObject: nmdc:989ecd70e581f17686f59d0a5234cebc +INFO:root:PassingDataObject: nmdc:9704a507c5d9c9d6f4dc42bced330344 +INFO:root:PassingDataObject: nmdc:1f752ce445ebbcf515ae72f56d96b591 INFO:root:PassingDataObject: nmdc:9db873f4b3a9160f8ab2bf4c1ac0d921 +INFO:root:PassingDataObject: nmdc:36ec2d19c701e968959d478428e07a03 +INFO:root:PassingDataObject: nmdc:52b3ef366869a7fc962e3c665fc257ff +INFO:root:PassingDataObject: nmdc:910f072bd72b9d20b385332929a4a3d7 +INFO:root:PassingDataObject: nmdc:aea76ea9592f718fa2e7c2ab2475efc2 +INFO:root:PassingDataObject: nmdc:e78e5989d12b059acaf52c24faee7a89 +INFO:root:PassingDataObject: nmdc:989ecd70e581f17686f59d0a5234cebc INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213353 @@ -5743,50 +5743,50 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213354 INFO:root:found 1 records INFO:root:record: nmdc:ce4f08538d6f705abc1505ed9cc8493b, ReadBased Analysis Activity for nmdc:mga0c789 -INFO:root:PassingDataObject: nmdc:f788210bfd7e852cb4927184fd4dc8d0 -INFO:root:PassingDataObject: nmdc:b49943cbfb6fc32a28b309b59389b68f +INFO:root:PassingDataObject: nmdc:c967d1954540c289dc3e177461e16d7c INFO:root:PassingDataObject: nmdc:581395fa84e118778aab43f9566aa6a3 +INFO:root:PassingDataObject: nmdc:de2eae2b7d272b6fe0d83d6c008355d2 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:ce4f08538d6f705abc1505ed9cc8493b -ERROR:root:FailedDataObject: nmdc:c967d1954540c289dc3e177461e16d7c, -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:ce4f08538d6f705abc1505ed9cc8493b -ERROR:root:FailedDataObject: nmdc:2886b27c40c1d9df999dee610e6af2b1, ERROR:root:FailedDataObject: nmdc:4362fd4f9f606f1dc4d00776e94ddbeb, -ERROR:root:FailedDataObject: nmdc:de2eae2b7d272b6fe0d83d6c008355d2, +ERROR:root:FailedDataObject: nmdc:2886b27c40c1d9df999dee610e6af2b1, +ERROR:root:FailedDataObject: nmdc:f788210bfd7e852cb4927184fd4dc8d0, +ERROR:root:FailedDataObject: nmdc:b49943cbfb6fc32a28b309b59389b68f, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:ce4f08538d6f705abc1505ed9cc8493b ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ce4f08538d6f705abc1505ed9cc8493b, ReadBased Analysis Activity for nmdc:mga0c789 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213354 INFO:root:found 1 records INFO:root:record: nmdc:ce4f08538d6f705abc1505ed9cc8493b, Assembly Activity for nmdc:mga0c789 -INFO:root:PassingDataObject: nmdc:8d11b47e57ad17ed8afbce02429204fb -INFO:root:PassingDataObject: nmdc:77e2eafe0f2c9428c9663454add7cfc0 INFO:root:PassingDataObject: nmdc:f317d8792266dcba89f37e43a9270484 +INFO:root:PassingDataObject: nmdc:8d11b47e57ad17ed8afbce02429204fb INFO:root:PassingDataObject: nmdc:66059c8a9b877afa93d5c74bfc19a9b3 +INFO:root:PassingDataObject: nmdc:77e2eafe0f2c9428c9663454add7cfc0 INFO:root:PassingDataObject: nmdc:52bcd468266f72732c5f7b07e3e0d353 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213354 INFO:root:found 1 records INFO:root:record: nmdc:ce4f08538d6f705abc1505ed9cc8493b, Annotation Activity for nmdc:mga0c789 +INFO:root:PassingDataObject: nmdc:abf6a2aa49be6c826f4c60651fe2493a +INFO:root:PassingDataObject: nmdc:fd8f9869f040162abe3be2a0931ea88b +INFO:root:PassingDataObject: nmdc:27b2033d5a4e1f914a8e7099752f34fb +INFO:root:PassingDataObject: nmdc:e4e120607fbb337a3fe962bd456410b7 +INFO:root:PassingDataObject: nmdc:3c8209719407a9eb2f46d887351d9b83 INFO:root:PassingDataObject: nmdc:8157c46db1c97093cd561e143e188cda INFO:root:PassingDataObject: nmdc:2af9b78550166411c3cc170c13463b13 INFO:root:PassingDataObject: nmdc:0700bf84cf33778f8591d1003c3312b8 -INFO:root:PassingDataObject: nmdc:fd8f9869f040162abe3be2a0931ea88b -INFO:root:PassingDataObject: nmdc:e4e120607fbb337a3fe962bd456410b7 -INFO:root:PassingDataObject: nmdc:eeae40b39f42579da3274b21e423b148 +INFO:root:PassingDataObject: nmdc:1518c8168dd321e1e6208b3a24b592d6 +INFO:root:PassingDataObject: nmdc:16bdc186788be6fc71187b4aaaf4bae0 +INFO:root:PassingDataObject: nmdc:c8fe2645439eae51e07ab2e88c07a18a INFO:root:PassingDataObject: nmdc:c1c48d264c83a97e87aca3412c44f6d1 -INFO:root:PassingDataObject: nmdc:190f2bfebdbb521874d7c4b4f9be0cde +INFO:root:PassingDataObject: nmdc:720721b0d110f0b543043148994d0ab2 INFO:root:PassingDataObject: nmdc:9da1dcf78bd972002a0ac6917a262d02 +INFO:root:PassingDataObject: nmdc:190f2bfebdbb521874d7c4b4f9be0cde INFO:root:PassingDataObject: nmdc:f3d397822c4951d07199cc70a38ab455 -INFO:root:PassingDataObject: nmdc:4231a089544266435b52842030342ee9 -INFO:root:PassingDataObject: nmdc:3c8209719407a9eb2f46d887351d9b83 -INFO:root:PassingDataObject: nmdc:abf6a2aa49be6c826f4c60651fe2493a +INFO:root:PassingDataObject: nmdc:eeae40b39f42579da3274b21e423b148 INFO:root:PassingDataObject: nmdc:fd08e44e17c27ec2d451d18656a18a05 -INFO:root:PassingDataObject: nmdc:1518c8168dd321e1e6208b3a24b592d6 -INFO:root:PassingDataObject: nmdc:720721b0d110f0b543043148994d0ab2 -INFO:root:PassingDataObject: nmdc:c8fe2645439eae51e07ab2e88c07a18a -INFO:root:PassingDataObject: nmdc:16bdc186788be6fc71187b4aaaf4bae0 -INFO:root:PassingDataObject: nmdc:27b2033d5a4e1f914a8e7099752f34fb +INFO:root:PassingDataObject: nmdc:4231a089544266435b52842030342ee9 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213354 @@ -5812,56 +5812,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, ReadBased Analysis Activity for nmdc:mga01k42 -INFO:root:PassingDataObject: nmdc:1dd5ec7ab305465deb9f38689a320709 +INFO:root:PassingDataObject: nmdc:61d1f1838d983c1d5ac232440460893c +INFO:root:PassingDataObject: nmdc:f8868d11a879f275d4d6143bf7cd1c65 INFO:root:PassingDataObject: nmdc:13fcb7a41f5d14f84ecdafee883857ca INFO:root:PassingDataObject: nmdc:80ec1cca49e6f46f5441f778d39334a7 -INFO:root:PassingDataObject: nmdc:5d9289f68e03bcf582229ef6a5ea0a67 -INFO:root:PassingDataObject: nmdc:32787a13d8fe71997023f82eee110dbd INFO:root:PassingDataObject: nmdc:aa219ce5583bc97f9e9bf1df90f0966e -INFO:root:PassingDataObject: nmdc:61d1f1838d983c1d5ac232440460893c -INFO:root:PassingDataObject: nmdc:f8868d11a879f275d4d6143bf7cd1c65 +INFO:root:PassingDataObject: nmdc:5d9289f68e03bcf582229ef6a5ea0a67 INFO:root:PassingDataObject: nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 +INFO:root:PassingDataObject: nmdc:32787a13d8fe71997023f82eee110dbd +INFO:root:PassingDataObject: nmdc:1dd5ec7ab305465deb9f38689a320709 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, Assembly Activity for nmdc:mga01k42 INFO:root:PassingDataObject: nmdc:774ba656ecf709dc459f44979b1b4f65 -INFO:root:PassingDataObject: nmdc:4fa9ad423eab6ca57746d536c3da9d9c -INFO:root:PassingDataObject: nmdc:595450b1e3ef7af7796b1c8d3c42e37c -INFO:root:PassingDataObject: nmdc:4daeb929d6c8b2a7068455a5484a14aa INFO:root:PassingDataObject: nmdc:1eb1559a69b20af687e645bd94e28602 +INFO:root:PassingDataObject: nmdc:4daeb929d6c8b2a7068455a5484a14aa +INFO:root:PassingDataObject: nmdc:595450b1e3ef7af7796b1c8d3c42e37c +INFO:root:PassingDataObject: nmdc:4fa9ad423eab6ca57746d536c3da9d9c INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, Annotation Activity for nmdc:mga01k42 -INFO:root:PassingDataObject: nmdc:626bb035d5e6211c1ee494297d725413 -INFO:root:PassingDataObject: nmdc:d644b085699536660a66dac0e7759f00 +INFO:root:PassingDataObject: nmdc:7be52e1d3dcb7fb45879e0f316471344 +INFO:root:PassingDataObject: nmdc:96d8fcf8e87a8b7a5c36297099bbf051 INFO:root:PassingDataObject: nmdc:e08b376d25f28f2fa5063a95e16f0deb -INFO:root:PassingDataObject: nmdc:7df1d1d35c73a0a62df6637bbde500b8 +INFO:root:PassingDataObject: nmdc:d94f3d5776cbd63bc4c6486e989a3d1c +INFO:root:PassingDataObject: nmdc:6e1939e22571b824045439560c0dc784 +INFO:root:PassingDataObject: nmdc:a8812efcfaa033b37c560510e5f5624b +INFO:root:PassingDataObject: nmdc:aeac6f402d816cb8ea52cc5af209963a INFO:root:PassingDataObject: nmdc:c7d24366091fafc178f1840e3dd8627f +INFO:root:PassingDataObject: nmdc:d644b085699536660a66dac0e7759f00 +INFO:root:PassingDataObject: nmdc:24c39782be97b2cc289e6c736c72c1e9 +INFO:root:PassingDataObject: nmdc:862de3838361963dd03b15cad155858a +INFO:root:PassingDataObject: nmdc:626bb035d5e6211c1ee494297d725413 +INFO:root:PassingDataObject: nmdc:90c9f30e1cc84581dc770b1480274cad +INFO:root:PassingDataObject: nmdc:7df1d1d35c73a0a62df6637bbde500b8 INFO:root:PassingDataObject: nmdc:f483c0e23bb4417b0483e2243d1b6bc6 -INFO:root:PassingDataObject: nmdc:81407b00530f0ac59b20b1c37a161a54 +INFO:root:PassingDataObject: nmdc:0d6d70b4259b1ecbd2f62dded2438bb9 INFO:root:PassingDataObject: nmdc:3ab3b0687cfdf6b6ed242d51173baffb -INFO:root:PassingDataObject: nmdc:862de3838361963dd03b15cad155858a INFO:root:PassingDataObject: nmdc:eebb2029252847f85585d52d222d776d -INFO:root:PassingDataObject: nmdc:d94f3d5776cbd63bc4c6486e989a3d1c -INFO:root:PassingDataObject: nmdc:96d8fcf8e87a8b7a5c36297099bbf051 -INFO:root:PassingDataObject: nmdc:7be52e1d3dcb7fb45879e0f316471344 -INFO:root:PassingDataObject: nmdc:0d6d70b4259b1ecbd2f62dded2438bb9 -INFO:root:PassingDataObject: nmdc:aeac6f402d816cb8ea52cc5af209963a -INFO:root:PassingDataObject: nmdc:90c9f30e1cc84581dc770b1480274cad -INFO:root:PassingDataObject: nmdc:24c39782be97b2cc289e6c736c72c1e9 -INFO:root:PassingDataObject: nmdc:a8812efcfaa033b37c560510e5f5624b -INFO:root:PassingDataObject: nmdc:6e1939e22571b824045439560c0dc784 +INFO:root:PassingDataObject: nmdc:81407b00530f0ac59b20b1c37a161a54 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, MAGs Analysis Activity for nmdc:mga01k42 -INFO:root:PassingDataObject: nmdc:77008418b513dec840ec7f8e4171c5d5 INFO:root:PassingDataObject: nmdc:86a96ff6822f782520b87ab151d06c37 +INFO:root:PassingDataObject: nmdc:77008418b513dec840ec7f8e4171c5d5 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213356 @@ -5880,14 +5880,14 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213355 INFO:root:found 1 records INFO:root:record: nmdc:cddfe7e84d03fedd2eac57a64a6b02d8, ReadBased Analysis Activity for nmdc:mga0t221 +INFO:root:PassingDataObject: nmdc:edf382163c1e19d7e44a5e76b78ed37d +INFO:root:PassingDataObject: nmdc:f3b9b92b02d84dcaa6c1c2f9da9aa5e2 INFO:root:PassingDataObject: nmdc:8b3bbea86a89750d04e296d2ca7516a0 -INFO:root:PassingDataObject: nmdc:749a526680822969a72c2bdefc934870 INFO:root:PassingDataObject: nmdc:0fa137a7216d90e9b548ad023fde787a -INFO:root:PassingDataObject: nmdc:f3b9b92b02d84dcaa6c1c2f9da9aa5e2 -INFO:root:PassingDataObject: nmdc:edf382163c1e19d7e44a5e76b78ed37d INFO:root:PassingDataObject: nmdc:45a7b29cf3507c83dd6cb7391ae325a1 INFO:root:PassingDataObject: nmdc:4fbea941838df056f23d2f5e5e623fa8 INFO:root:PassingDataObject: nmdc:3302d9463d73c2f5b56077476d3072d4 +INFO:root:PassingDataObject: nmdc:749a526680822969a72c2bdefc934870 INFO:root:PassingDataObject: nmdc:18b9a6ae7e24472c382475d68e148242 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 @@ -5895,34 +5895,34 @@ INFO:root:set_name: metagenome_assembly_set for gold:Gp0213355 INFO:root:found 1 records INFO:root:record: nmdc:cddfe7e84d03fedd2eac57a64a6b02d8, Assembly Activity for nmdc:mga0t221 INFO:root:PassingDataObject: nmdc:d3abff3c9b8c81420662e2191a19a49e -INFO:root:PassingDataObject: nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 -INFO:root:PassingDataObject: nmdc:93d97ed02fab960bdaa49abd9ab61861 INFO:root:PassingDataObject: nmdc:290dacce7b0033b70ac3d9ee81ebe834 +INFO:root:PassingDataObject: nmdc:93d97ed02fab960bdaa49abd9ab61861 +INFO:root:PassingDataObject: nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 INFO:root:PassingDataObject: nmdc:75ad27df82034cd6dc438d12a13127d4 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213355 INFO:root:found 1 records INFO:root:record: nmdc:cddfe7e84d03fedd2eac57a64a6b02d8, Annotation Activity for nmdc:mga0t221 -INFO:root:PassingDataObject: nmdc:3002a8e82cc34a6466ff90b02d6cbf5c -INFO:root:PassingDataObject: nmdc:814446e5b5cf8e08915912dec586ccfe -INFO:root:PassingDataObject: nmdc:d41e7cbcb83bd6c83a261151cb6d7636 -INFO:root:PassingDataObject: nmdc:2203d72ff2a2688eea4a19cea4f0f4ca -INFO:root:PassingDataObject: nmdc:bef7a1477244b9d90af5d69215e73eeb INFO:root:PassingDataObject: nmdc:de04843a640451de8fe9f3c21f42194f -INFO:root:PassingDataObject: nmdc:b93c9304a42e350964441098811d839d INFO:root:PassingDataObject: nmdc:3700cd2e6dc2e2bf542f6d7a0e6e5e6a -INFO:root:PassingDataObject: nmdc:da7d2bd95093ddc15abad482ea4f5007 -INFO:root:PassingDataObject: nmdc:7d4f744d22a2408341e40e6623b0b047 -INFO:root:PassingDataObject: nmdc:abf1547dafd822bbdca71d5b9e8a7779 INFO:root:PassingDataObject: nmdc:f35026920a2f5acc9bc9db006c634375 -INFO:root:PassingDataObject: nmdc:970e23c414e1529eed80909c5f38254c -INFO:root:PassingDataObject: nmdc:bf566464a721cfe76dc80f682286f336 -INFO:root:PassingDataObject: nmdc:ac2d23ee1bb84d0f42904dbecb63fe1f -INFO:root:PassingDataObject: nmdc:bd528a5e70d507669e1d7b11990dd9fa +INFO:root:PassingDataObject: nmdc:7d4f744d22a2408341e40e6623b0b047 INFO:root:PassingDataObject: nmdc:1af7d2752bd4c57b10fff1eccd0acc45 +INFO:root:PassingDataObject: nmdc:814446e5b5cf8e08915912dec586ccfe +INFO:root:PassingDataObject: nmdc:bef7a1477244b9d90af5d69215e73eeb INFO:root:PassingDataObject: nmdc:143a8686046c518b0f893eb608e4329f +INFO:root:PassingDataObject: nmdc:970e23c414e1529eed80909c5f38254c +INFO:root:PassingDataObject: nmdc:bd528a5e70d507669e1d7b11990dd9fa +INFO:root:PassingDataObject: nmdc:da7d2bd95093ddc15abad482ea4f5007 +INFO:root:PassingDataObject: nmdc:b93c9304a42e350964441098811d839d +INFO:root:PassingDataObject: nmdc:d41e7cbcb83bd6c83a261151cb6d7636 +INFO:root:PassingDataObject: nmdc:ac2d23ee1bb84d0f42904dbecb63fe1f +INFO:root:PassingDataObject: nmdc:2203d72ff2a2688eea4a19cea4f0f4ca +INFO:root:PassingDataObject: nmdc:bf566464a721cfe76dc80f682286f336 INFO:root:PassingDataObject: nmdc:9a1e2587991ba7218d68f00c5c0a2a84 +INFO:root:PassingDataObject: nmdc:3002a8e82cc34a6466ff90b02d6cbf5c +INFO:root:PassingDataObject: nmdc:abf1547dafd822bbdca71d5b9e8a7779 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213355 @@ -5941,63 +5941,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:dbfdeaccbb5b01e INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, Read QC Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:e5639bbf52ada23bc315b10c45359dfb INFO:root:PassingDataObject: nmdc:8e14de4ed6b5106872fece8bc56520b5 +INFO:root:PassingDataObject: nmdc:e5639bbf52ada23bc315b10c45359dfb INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, ReadBased Analysis Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:5eb6a360229b07828652233cdf79b789 -INFO:root:PassingDataObject: nmdc:c9014a78668556a1203cf95cca1cfb1c INFO:root:PassingDataObject: nmdc:1daaf5390937d482524357e452c0b284 -INFO:root:PassingDataObject: nmdc:d94744351cc7d750b4c9c8e97c73b3d4 -INFO:root:PassingDataObject: nmdc:51543082d5583142714c723f25c0ae59 +INFO:root:PassingDataObject: nmdc:eac79277f377bf43c195f0c79e7845a8 +INFO:root:PassingDataObject: nmdc:c9014a78668556a1203cf95cca1cfb1c INFO:root:PassingDataObject: nmdc:c9f07e15d6c51bfe3c390a0287fc64c6 +INFO:root:PassingDataObject: nmdc:d94744351cc7d750b4c9c8e97c73b3d4 INFO:root:PassingDataObject: nmdc:782c9ce36f94f7d5e8da1f080a844cae -INFO:root:PassingDataObject: nmdc:eac79277f377bf43c195f0c79e7845a8 +INFO:root:PassingDataObject: nmdc:5eb6a360229b07828652233cdf79b789 INFO:root:PassingDataObject: nmdc:dd142d29a7556780b70685ff50e64ddd +INFO:root:PassingDataObject: nmdc:51543082d5583142714c723f25c0ae59 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, Assembly Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:98501ed7ca9dcaa374798de03ddee2d6 +INFO:root:PassingDataObject: nmdc:4b2bc0938d8a400158b4888cb7acafd0 INFO:root:PassingDataObject: nmdc:7b981760a9a92bd4124de889bfba2771 INFO:root:PassingDataObject: nmdc:cd5b242cdd8c14516f87f7d5ad6c75e3 -INFO:root:PassingDataObject: nmdc:4b2bc0938d8a400158b4888cb7acafd0 INFO:root:PassingDataObject: nmdc:65ad1bfe5efd2930e32ae347949ff099 +INFO:root:PassingDataObject: nmdc:98501ed7ca9dcaa374798de03ddee2d6 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, Annotation Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:9750722937c36ec107b30a0c17fad191 +INFO:root:PassingDataObject: nmdc:ecb1cfdead48a8ad87584225ad41d33e INFO:root:PassingDataObject: nmdc:78dce331feae8f60674fdb4c4ed81933 -INFO:root:PassingDataObject: nmdc:91219c706c5f1ec05760126b4f2c4e3c -INFO:root:PassingDataObject: nmdc:ce2c6fb662c073862e6dd0aef84b11ae -INFO:root:PassingDataObject: nmdc:3c27cbd8f990e84323588c1bec62bc95 -INFO:root:PassingDataObject: nmdc:2e17da9c98a1ba15668caec1c7f1a3bc -INFO:root:PassingDataObject: nmdc:ee64bb5a4fd01da71a9accf9074494c6 -INFO:root:PassingDataObject: nmdc:63e4c58a0f022ea93b135816de2fe36a -INFO:root:PassingDataObject: nmdc:6606e19ee775ed9df8875bdbc7722ec9 -INFO:root:PassingDataObject: nmdc:7c54b39bfd6849db1d7fb433b5e61670 INFO:root:PassingDataObject: nmdc:158c2160423fb114a01a9d0a1eda73f3 +INFO:root:PassingDataObject: nmdc:8d9d43ee5c2a9a5dc954d63a5b3b1bb8 +INFO:root:PassingDataObject: nmdc:c9787e886faba600a35cad60366057fa +INFO:root:PassingDataObject: nmdc:9750722937c36ec107b30a0c17fad191 +INFO:root:PassingDataObject: nmdc:7c54b39bfd6849db1d7fb433b5e61670 INFO:root:PassingDataObject: nmdc:b372d961972736b8502d885105b5da2e +INFO:root:PassingDataObject: nmdc:ee64bb5a4fd01da71a9accf9074494c6 +INFO:root:PassingDataObject: nmdc:2e17da9c98a1ba15668caec1c7f1a3bc INFO:root:PassingDataObject: nmdc:a2d99d8198b49ec7c2508dd11c92409f -INFO:root:PassingDataObject: nmdc:c9787e886faba600a35cad60366057fa +INFO:root:PassingDataObject: nmdc:3c27cbd8f990e84323588c1bec62bc95 +INFO:root:PassingDataObject: nmdc:4394506264cf973cba212939dd41f452 +INFO:root:PassingDataObject: nmdc:91219c706c5f1ec05760126b4f2c4e3c +INFO:root:PassingDataObject: nmdc:ce2c6fb662c073862e6dd0aef84b11ae +INFO:root:PassingDataObject: nmdc:6606e19ee775ed9df8875bdbc7722ec9 INFO:root:PassingDataObject: nmdc:24bcf62079f9c9950847fd36ca40c5a8 INFO:root:PassingDataObject: nmdc:4701d35661f6a9ba5b1667353c21e987 -INFO:root:PassingDataObject: nmdc:8d9d43ee5c2a9a5dc954d63a5b3b1bb8 -INFO:root:PassingDataObject: nmdc:4394506264cf973cba212939dd41f452 -INFO:root:PassingDataObject: nmdc:ecb1cfdead48a8ad87584225ad41d33e +INFO:root:PassingDataObject: nmdc:63e4c58a0f022ea93b135816de2fe36a INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, MAGs Analysis Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:68a18086f2dea579fff2fde349fef30c INFO:root:PassingDataObject: nmdc:41d1a5004ed82f18792e30f108b8aad3 +INFO:root:PassingDataObject: nmdc:68a18086f2dea579fff2fde349fef30c INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213359 @@ -6009,56 +6009,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2437e48c81f2672 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, Read QC Activity for nmdc:mga0qn58 -INFO:root:PassingDataObject: nmdc:cc0272c1e6efdd2134e32d05081af9c6 INFO:root:PassingDataObject: nmdc:2ffb83977e0251de1215c15725b707af +INFO:root:PassingDataObject: nmdc:cc0272c1e6efdd2134e32d05081af9c6 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, ReadBased Analysis Activity for nmdc:mga0qn58 -INFO:root:PassingDataObject: nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce -INFO:root:PassingDataObject: nmdc:41c4bbd0be4113dffbb442ab0f3e309b -INFO:root:PassingDataObject: nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 -INFO:root:PassingDataObject: nmdc:e9bf0f6d2656616f08d44ea74d3037f3 -INFO:root:PassingDataObject: nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 +INFO:root:PassingDataObject: nmdc:62dfa71b652641a0ff8b3df2a6b888bb INFO:root:PassingDataObject: nmdc:e2a5c750201b5f5f5f7a14038aec540e INFO:root:PassingDataObject: nmdc:fec6a6cd5c7c52b4a925bab8656402e9 +INFO:root:PassingDataObject: nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 +INFO:root:PassingDataObject: nmdc:e9bf0f6d2656616f08d44ea74d3037f3 INFO:root:PassingDataObject: nmdc:6b6a54c1c9528598d4b7271280fb3a62 -INFO:root:PassingDataObject: nmdc:62dfa71b652641a0ff8b3df2a6b888bb +INFO:root:PassingDataObject: nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 +INFO:root:PassingDataObject: nmdc:41c4bbd0be4113dffbb442ab0f3e309b +INFO:root:PassingDataObject: nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, Assembly Activity for nmdc:mga0qn58 INFO:root:PassingDataObject: nmdc:ea286f9c66a89fd51e43db2aefa7c6c6 +INFO:root:PassingDataObject: nmdc:719666ff80b27a20d42663db3a0a45da INFO:root:PassingDataObject: nmdc:b701b1436f30f504c50c4effdceb5904 INFO:root:PassingDataObject: nmdc:e3f1be6f767137fa782d673e325d8c31 -INFO:root:PassingDataObject: nmdc:719666ff80b27a20d42663db3a0a45da INFO:root:PassingDataObject: nmdc:3d0b930e87f60cc176d4df3eee15d3d8 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, Annotation Activity for nmdc:mga0qn58 -INFO:root:PassingDataObject: nmdc:f2676a56f8b31325ec9421481f02ec41 -INFO:root:PassingDataObject: nmdc:c6841892dbb0b8444c07702d83804589 -INFO:root:PassingDataObject: nmdc:443d4ce8327a3be67e0469cf4f5b4dea -INFO:root:PassingDataObject: nmdc:a08fa33cbca9f2c35b22887c5bac3a32 -INFO:root:PassingDataObject: nmdc:5e002d5aa14a699a899764146d967262 -INFO:root:PassingDataObject: nmdc:4f1f24ddddb6cbcde673fbe9e0104835 -INFO:root:PassingDataObject: nmdc:a56d9547d6409bba36db8aa9d116f5da -INFO:root:PassingDataObject: nmdc:cab50730f3ee5603975bdf2fded37a22 -INFO:root:PassingDataObject: nmdc:4635d194b12e8a9d46fbdc3bb497d219 -INFO:root:PassingDataObject: nmdc:8d04b48fcde4ac1169fdf1c65449d985 -INFO:root:PassingDataObject: nmdc:270f5c396397a35058e54e8d0adc7f4c -INFO:root:PassingDataObject: nmdc:c2edf53bca26a65a6107b6e368270c2c INFO:root:PassingDataObject: nmdc:ea8d50ebb448cd771ac8e6633df15046 INFO:root:PassingDataObject: nmdc:925497624e4f678ef4fac4a67ae9f4c7 INFO:root:PassingDataObject: nmdc:e7580ac9ef99b9bdc1f55e69da44c8ab -INFO:root:PassingDataObject: nmdc:8fdaa31b128929dfdce099037f3ed04f INFO:root:PassingDataObject: nmdc:ccc09fc10a1b10b964cb956c4f6b1339 -INFO:root:PassingDataObject: nmdc:01b2388cd826d6a7708a4331b3d81809 +INFO:root:PassingDataObject: nmdc:cab50730f3ee5603975bdf2fded37a22 +INFO:root:PassingDataObject: nmdc:a56d9547d6409bba36db8aa9d116f5da +INFO:root:PassingDataObject: nmdc:c2edf53bca26a65a6107b6e368270c2c +INFO:root:PassingDataObject: nmdc:8d04b48fcde4ac1169fdf1c65449d985 +INFO:root:PassingDataObject: nmdc:4f1f24ddddb6cbcde673fbe9e0104835 +INFO:root:PassingDataObject: nmdc:270f5c396397a35058e54e8d0adc7f4c +INFO:root:PassingDataObject: nmdc:a08fa33cbca9f2c35b22887c5bac3a32 +INFO:root:PassingDataObject: nmdc:4635d194b12e8a9d46fbdc3bb497d219 +INFO:root:PassingDataObject: nmdc:8fdaa31b128929dfdce099037f3ed04f INFO:root:PassingDataObject: nmdc:52869fefcaad32e0dfcb63ad9bb4651a +INFO:root:PassingDataObject: nmdc:f2676a56f8b31325ec9421481f02ec41 +INFO:root:PassingDataObject: nmdc:01b2388cd826d6a7708a4331b3d81809 +INFO:root:PassingDataObject: nmdc:c6841892dbb0b8444c07702d83804589 +INFO:root:PassingDataObject: nmdc:443d4ce8327a3be67e0469cf4f5b4dea +INFO:root:PassingDataObject: nmdc:5e002d5aa14a699a899764146d967262 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213369 @@ -6084,57 +6084,57 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, ReadBased Analysis Activity for nmdc:mga0mc82 -INFO:root:PassingDataObject: nmdc:6f9ae6d9e35c2712e42be1c5e1a220c0 -INFO:root:PassingDataObject: nmdc:d7b6407a6cf90e8632a041613ba7af7a -INFO:root:PassingDataObject: nmdc:7cbf5868b5d3d30f8dd8bab089523082 -INFO:root:PassingDataObject: nmdc:355ed122ebfedeb97b9039f53071fb32 +INFO:root:PassingDataObject: nmdc:824aec1509237ed08980524f83195790 +INFO:root:PassingDataObject: nmdc:f5100b64e33408b5cc4392519c64659b ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:2e384ea11627508ae28658217bdfe3b3 +ERROR:root:FailedDataObject: nmdc:6f9ae6d9e35c2712e42be1c5e1a220c0, ERROR:root:FailedDataObject: nmdc:5fecd27babb34be50e875bdac6ee440e, -ERROR:root:FailedDataObject: nmdc:824aec1509237ed08980524f83195790, +ERROR:root:FailedDataObject: nmdc:355ed122ebfedeb97b9039f53071fb32, +ERROR:root:FailedDataObject: nmdc:d7b6407a6cf90e8632a041613ba7af7a, ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:2e384ea11627508ae28658217bdfe3b3 -ERROR:root:FailedDataObject: nmdc:f5100b64e33408b5cc4392519c64659b, +ERROR:root:FailedDataObject: nmdc:7cbf5868b5d3d30f8dd8bab089523082, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2e384ea11627508ae28658217bdfe3b3, ReadBased Analysis Activity for nmdc:mga0mc82 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, Assembly Activity for nmdc:mga0mc82 -INFO:root:PassingDataObject: nmdc:c66004718621b2127afcba96ee230ddf -INFO:root:PassingDataObject: nmdc:2d2f4eac3e8138a1b6d25a1b576d5745 -INFO:root:PassingDataObject: nmdc:6f633eb389d3e3ec440533279471a633 INFO:root:PassingDataObject: nmdc:7bef881cb661e723a7851e58e8c18748 +INFO:root:PassingDataObject: nmdc:6f633eb389d3e3ec440533279471a633 +INFO:root:PassingDataObject: nmdc:2d2f4eac3e8138a1b6d25a1b576d5745 +INFO:root:PassingDataObject: nmdc:c66004718621b2127afcba96ee230ddf INFO:root:PassingDataObject: nmdc:e62e7b70866da3b4e75dabd7401c3b7e INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, Annotation Activity for nmdc:mga0mc82 +INFO:root:PassingDataObject: nmdc:d9789dd7c1613d628537370b654289cb +INFO:root:PassingDataObject: nmdc:e0cadba3af3652f564f481953a11a45b +INFO:root:PassingDataObject: nmdc:32722e1d4071c12311551275abb12b73 +INFO:root:PassingDataObject: nmdc:13c8ec0c4cd5b85afefb9e7a0e3d268e INFO:root:PassingDataObject: nmdc:82fb835883329b1e2fd82ae0f79203bc +INFO:root:PassingDataObject: nmdc:d7a6032065fbe57d3c82adb29c494a84 +INFO:root:PassingDataObject: nmdc:5b0e42a2aa2f34793be303afe0f99e6d INFO:root:PassingDataObject: nmdc:67a79992152df526d4b4390ca7744bb5 -INFO:root:PassingDataObject: nmdc:a0e4943260bb1162c39f41f4eb4ec238 -INFO:root:PassingDataObject: nmdc:a59619a7e9634c4e56a264c04902f437 -INFO:root:PassingDataObject: nmdc:e13505ce64ef8230d1a203b09762a36e INFO:root:PassingDataObject: nmdc:0f163af7fd3d6ed5e54b9977558af2e1 -INFO:root:PassingDataObject: nmdc:eb48bdac59936dcc5376e2cce7f14225 -INFO:root:PassingDataObject: nmdc:0a0434e3ad6406cc46ead13d0f778d70 -INFO:root:PassingDataObject: nmdc:5b0e42a2aa2f34793be303afe0f99e6d -INFO:root:PassingDataObject: nmdc:e0cadba3af3652f564f481953a11a45b -INFO:root:PassingDataObject: nmdc:13c8ec0c4cd5b85afefb9e7a0e3d268e -INFO:root:PassingDataObject: nmdc:0fc83b831f52aaf6d08edb1b6f8ee3c7 INFO:root:PassingDataObject: nmdc:52e45dc9dd75627392572deabb21f93c -INFO:root:PassingDataObject: nmdc:32722e1d4071c12311551275abb12b73 -INFO:root:PassingDataObject: nmdc:d7a6032065fbe57d3c82adb29c494a84 -INFO:root:PassingDataObject: nmdc:d9789dd7c1613d628537370b654289cb +INFO:root:PassingDataObject: nmdc:e13505ce64ef8230d1a203b09762a36e +INFO:root:PassingDataObject: nmdc:a0e4943260bb1162c39f41f4eb4ec238 +INFO:root:PassingDataObject: nmdc:0fc83b831f52aaf6d08edb1b6f8ee3c7 +INFO:root:PassingDataObject: nmdc:eb48bdac59936dcc5376e2cce7f14225 +INFO:root:PassingDataObject: nmdc:a59619a7e9634c4e56a264c04902f437 INFO:root:PassingDataObject: nmdc:2a4acda53d0fbd2adc7367382e621657 -INFO:root:PassingDataObject: nmdc:cfb4663de8041b16b29ab770d4b06989 +INFO:root:PassingDataObject: nmdc:0a0434e3ad6406cc46ead13d0f778d70 INFO:root:PassingDataObject: nmdc:d05d0c22451f3c92c282d1e52af82a8c +INFO:root:PassingDataObject: nmdc:cfb4663de8041b16b29ab770d4b06989 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, MAGs Analysis Activity for nmdc:mga0mc82 -INFO:root:PassingDataObject: nmdc:977e030147ab8ed322346e6c6d512aa4 INFO:root:PassingDataObject: nmdc:ab7b2f5ba894bf5699721ef7000e1265 +INFO:root:PassingDataObject: nmdc:977e030147ab8ed322346e6c6d512aa4 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213360 @@ -6153,56 +6153,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, ReadBased Analysis Activity for nmdc:mga0s996 -INFO:root:PassingDataObject: nmdc:e904b455b89d83441fd6a5d4ceec8f07 -INFO:root:PassingDataObject: nmdc:c28210f3071feeb1b190c2419ba39fd1 -INFO:root:PassingDataObject: nmdc:68d3e76cd0e9dc8f1d9e5222d9ba3e4f -INFO:root:PassingDataObject: nmdc:92f6a01b60199cdd659291e6b69f2ca9 +INFO:root:PassingDataObject: nmdc:980c2b734fe7f0949c431109ba0bc757 INFO:root:PassingDataObject: nmdc:225829fc2562b2b761aab02e1fdfd752 +INFO:root:PassingDataObject: nmdc:92f6a01b60199cdd659291e6b69f2ca9 +INFO:root:PassingDataObject: nmdc:e904b455b89d83441fd6a5d4ceec8f07 INFO:root:PassingDataObject: nmdc:52be54f58b105b1b32e97eb7e79b024e +INFO:root:PassingDataObject: nmdc:68d3e76cd0e9dc8f1d9e5222d9ba3e4f INFO:root:PassingDataObject: nmdc:12de38964eda24a7d5ec260beb1584a5 INFO:root:PassingDataObject: nmdc:54d8452e9d66b0cd889e24b258f89a40 -INFO:root:PassingDataObject: nmdc:980c2b734fe7f0949c431109ba0bc757 +INFO:root:PassingDataObject: nmdc:c28210f3071feeb1b190c2419ba39fd1 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, Assembly Activity for nmdc:mga0s996 -INFO:root:PassingDataObject: nmdc:8f889179bcb6e0d10554668e2a6602c0 -INFO:root:PassingDataObject: nmdc:4560c4ae0d6c207d46823433078d6454 +INFO:root:PassingDataObject: nmdc:173d4154bb8b27c533dc27c574ba9d9b INFO:root:PassingDataObject: nmdc:c014933ebb8bec7bfce37f700dbe8618 INFO:root:PassingDataObject: nmdc:33ff2f01caa73fd559b8d9e4eeb5928a -INFO:root:PassingDataObject: nmdc:173d4154bb8b27c533dc27c574ba9d9b +INFO:root:PassingDataObject: nmdc:8f889179bcb6e0d10554668e2a6602c0 +INFO:root:PassingDataObject: nmdc:4560c4ae0d6c207d46823433078d6454 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, Annotation Activity for nmdc:mga0s996 -INFO:root:PassingDataObject: nmdc:567bd3335a80092342397ade9b78c856 +INFO:root:PassingDataObject: nmdc:d1cf6d8920ac367148615b3e2c52d1a1 +INFO:root:PassingDataObject: nmdc:abc79038b9f77c03464839b348551f8f +INFO:root:PassingDataObject: nmdc:9bf7da984af47d3d2cacd3f63359ebc7 +INFO:root:PassingDataObject: nmdc:6cd4b13d54e6c105aaed68431558d9db +INFO:root:PassingDataObject: nmdc:69c22cf1e22a13a0894180d3ef7308c3 +INFO:root:PassingDataObject: nmdc:0d8cc7e6a917b54d2820951ddc4a5202 +INFO:root:PassingDataObject: nmdc:4482bacc24d8e083d17eea26353f0d09 +INFO:root:PassingDataObject: nmdc:71268c59bb4c4b7cc11bfe240d4ad060 +INFO:root:PassingDataObject: nmdc:ae7b0d31bada0df5fe26c437dd422746 +INFO:root:PassingDataObject: nmdc:1a4cf74d56f117e2e1ce87fb5ee9998d +INFO:root:PassingDataObject: nmdc:f5a279f221e3d7171aa016ffc5c7bf61 +INFO:root:PassingDataObject: nmdc:a8e35d784f823eb0ee2ad84e9389aa63 +INFO:root:PassingDataObject: nmdc:28a16403d9ec12644ba6b9e2c58efece INFO:root:PassingDataObject: nmdc:22c62be9c224efc91a90c6513d5f5fa6 +INFO:root:PassingDataObject: nmdc:567bd3335a80092342397ade9b78c856 INFO:root:PassingDataObject: nmdc:5a0ce24d15529cff9b6911bd504121bc -INFO:root:PassingDataObject: nmdc:f5a279f221e3d7171aa016ffc5c7bf61 -INFO:root:PassingDataObject: nmdc:71268c59bb4c4b7cc11bfe240d4ad060 INFO:root:PassingDataObject: nmdc:cd79810b9032daa84898644780349ee7 -INFO:root:PassingDataObject: nmdc:69c22cf1e22a13a0894180d3ef7308c3 -INFO:root:PassingDataObject: nmdc:28a16403d9ec12644ba6b9e2c58efece -INFO:root:PassingDataObject: nmdc:abc79038b9f77c03464839b348551f8f -INFO:root:PassingDataObject: nmdc:0d8cc7e6a917b54d2820951ddc4a5202 INFO:root:PassingDataObject: nmdc:825133b286c4e8846eda5207eeefd7fa INFO:root:PassingDataObject: nmdc:0dfa7d9e028c6bfac439171a2c17fe69 -INFO:root:PassingDataObject: nmdc:a8e35d784f823eb0ee2ad84e9389aa63 -INFO:root:PassingDataObject: nmdc:9bf7da984af47d3d2cacd3f63359ebc7 -INFO:root:PassingDataObject: nmdc:1a4cf74d56f117e2e1ce87fb5ee9998d -INFO:root:PassingDataObject: nmdc:ae7b0d31bada0df5fe26c437dd422746 -INFO:root:PassingDataObject: nmdc:6cd4b13d54e6c105aaed68431558d9db -INFO:root:PassingDataObject: nmdc:4482bacc24d8e083d17eea26353f0d09 -INFO:root:PassingDataObject: nmdc:d1cf6d8920ac367148615b3e2c52d1a1 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, MAGs Analysis Activity for nmdc:mga0s996 -INFO:root:PassingDataObject: nmdc:2eb0d4473a1fd0dc771e76d957c66688 INFO:root:PassingDataObject: nmdc:89856506bf9a06c1dc62fe5cbbc90034 +INFO:root:PassingDataObject: nmdc:2eb0d4473a1fd0dc771e76d957c66688 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213361 @@ -6214,63 +6214,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:cb53962aabcda82 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, Read QC Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:da7097d7d6673d4e0e1cf90f05af3201 INFO:root:PassingDataObject: nmdc:3b889c06bb7e48bb4975ceff3a980952 +INFO:root:PassingDataObject: nmdc:da7097d7d6673d4e0e1cf90f05af3201 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, ReadBased Analysis Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:15641306d09678eeb660afe9baa0dd52 -INFO:root:PassingDataObject: nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 INFO:root:PassingDataObject: nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 -INFO:root:PassingDataObject: nmdc:7e23e02f296d5e9d401ee3aa5af6881e -INFO:root:PassingDataObject: nmdc:15235ba07643fdf9be634dec16cb40d9 -INFO:root:PassingDataObject: nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 -INFO:root:PassingDataObject: nmdc:438858d832b7204080d117925306057c INFO:root:PassingDataObject: nmdc:1e211c7908292e3c736ac51d366dafc0 INFO:root:PassingDataObject: nmdc:15f09eb6e317e64163c3864a7d75b8f8 +INFO:root:PassingDataObject: nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 +INFO:root:PassingDataObject: nmdc:438858d832b7204080d117925306057c +INFO:root:PassingDataObject: nmdc:15235ba07643fdf9be634dec16cb40d9 +INFO:root:PassingDataObject: nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 +INFO:root:PassingDataObject: nmdc:15641306d09678eeb660afe9baa0dd52 +INFO:root:PassingDataObject: nmdc:7e23e02f296d5e9d401ee3aa5af6881e INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, Assembly Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:36aca4506415f2e7ecab46150cadc4fd -INFO:root:PassingDataObject: nmdc:e5f231e2f4737438a54110763946ae2a +INFO:root:PassingDataObject: nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 INFO:root:PassingDataObject: nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 INFO:root:PassingDataObject: nmdc:3fc371b6d4a8f79384bfd7027455d6fb -INFO:root:PassingDataObject: nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 +INFO:root:PassingDataObject: nmdc:36aca4506415f2e7ecab46150cadc4fd +INFO:root:PassingDataObject: nmdc:e5f231e2f4737438a54110763946ae2a INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, Annotation Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:1d4c165270687552f4078909895ff5ac -INFO:root:PassingDataObject: nmdc:7d215a7ca955f33f070335eac6cf87ca +INFO:root:PassingDataObject: nmdc:118a91b0c01a25451991b4dcbc93f1f8 +INFO:root:PassingDataObject: nmdc:086a1be3ec4b8a498f6e7729287b2c62 +INFO:root:PassingDataObject: nmdc:91be4b33d6f603d4cea5f97a9036becf INFO:root:PassingDataObject: nmdc:82e8fe111ff9cc7ace023d14a838cce4 -INFO:root:PassingDataObject: nmdc:bd629abb4fe70f17ad7237bf599b0bef INFO:root:PassingDataObject: nmdc:73a54489961a39fbbf94d1e1bf629a57 -INFO:root:PassingDataObject: nmdc:2887c768ffa0f91e7c67be37e211c0d6 -INFO:root:PassingDataObject: nmdc:6e9028dcb84d24af9c7471c2fc25352d -INFO:root:PassingDataObject: nmdc:b2ad2515aa5458047157414162ec272b -INFO:root:PassingDataObject: nmdc:34f95002976f594ca8a627dff074254c INFO:root:PassingDataObject: nmdc:748a4ada4f254f3c8b214dd7ec24101d -INFO:root:PassingDataObject: nmdc:91be4b33d6f603d4cea5f97a9036becf +INFO:root:PassingDataObject: nmdc:b2ad2515aa5458047157414162ec272b INFO:root:PassingDataObject: nmdc:881574e6c2377071a6ccb01c80e4af2e -INFO:root:PassingDataObject: nmdc:f2923fb4124996f246641efabc6c271a -INFO:root:PassingDataObject: nmdc:086a1be3ec4b8a498f6e7729287b2c62 -INFO:root:PassingDataObject: nmdc:afb5439ee6d3a212f3e0b9b831ff5a04 -INFO:root:PassingDataObject: nmdc:8df39517236a7fffede1c82b63373fb3 -INFO:root:PassingDataObject: nmdc:118a91b0c01a25451991b4dcbc93f1f8 +INFO:root:PassingDataObject: nmdc:bd629abb4fe70f17ad7237bf599b0bef INFO:root:PassingDataObject: nmdc:c5f96ea4159a506c6ae3c3827d3b2b44 +INFO:root:PassingDataObject: nmdc:1d4c165270687552f4078909895ff5ac +INFO:root:PassingDataObject: nmdc:7d215a7ca955f33f070335eac6cf87ca +INFO:root:PassingDataObject: nmdc:8df39517236a7fffede1c82b63373fb3 +INFO:root:PassingDataObject: nmdc:f2923fb4124996f246641efabc6c271a +INFO:root:PassingDataObject: nmdc:2887c768ffa0f91e7c67be37e211c0d6 +INFO:root:PassingDataObject: nmdc:6e9028dcb84d24af9c7471c2fc25352d INFO:root:PassingDataObject: nmdc:cc4fe58a4da63a0dd5853ba3c0e2349a +INFO:root:PassingDataObject: nmdc:afb5439ee6d3a212f3e0b9b831ff5a04 +INFO:root:PassingDataObject: nmdc:34f95002976f594ca8a627dff074254c INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, MAGs Analysis Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:85b56743686535ec6bd512788c6b6181 INFO:root:PassingDataObject: nmdc:22f7f7c5091240284a0521fef1e07fe7 +INFO:root:PassingDataObject: nmdc:85b56743686535ec6bd512788c6b6181 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213357 @@ -6282,56 +6282,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c4df425ae66b46d INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, Read QC Activity for nmdc:mga0b982 -INFO:root:PassingDataObject: nmdc:428534dbbc3d8201682fc3d8f5e818a6 INFO:root:PassingDataObject: nmdc:3b7411005de416a82c68151462f846f7 +INFO:root:PassingDataObject: nmdc:428534dbbc3d8201682fc3d8f5e818a6 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, ReadBased Analysis Activity for nmdc:mga0b982 -INFO:root:PassingDataObject: nmdc:a36f26239b60ebb3ca62f050ee6e4739 -INFO:root:PassingDataObject: nmdc:62e63bd91b0765d3858fc2791a14a4ea -INFO:root:PassingDataObject: nmdc:d2e34c2b30fcc9db48a259e2e194b22e INFO:root:PassingDataObject: nmdc:507af343316140c9e0e7ad26cfd8cf6b -INFO:root:PassingDataObject: nmdc:73f0017a6c7866c263c64a437df23c7e -INFO:root:PassingDataObject: nmdc:d8f2eb681beb53a20ae6c4dd00819634 -INFO:root:PassingDataObject: nmdc:690a922236d7f0a3df8c4d3c6b2aca5b INFO:root:PassingDataObject: nmdc:e97d8a552f497bdea19fc444d8890b13 +INFO:root:PassingDataObject: nmdc:a36f26239b60ebb3ca62f050ee6e4739 INFO:root:PassingDataObject: nmdc:b2debb07a334d9c9eedfaf3f12ff2433 +INFO:root:PassingDataObject: nmdc:d8f2eb681beb53a20ae6c4dd00819634 +INFO:root:PassingDataObject: nmdc:73f0017a6c7866c263c64a437df23c7e +INFO:root:PassingDataObject: nmdc:690a922236d7f0a3df8c4d3c6b2aca5b +INFO:root:PassingDataObject: nmdc:62e63bd91b0765d3858fc2791a14a4ea +INFO:root:PassingDataObject: nmdc:d2e34c2b30fcc9db48a259e2e194b22e INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, Assembly Activity for nmdc:mga0b982 -INFO:root:PassingDataObject: nmdc:80aa19f314fa95953264159534fecc73 INFO:root:PassingDataObject: nmdc:3162e231651b3f71e383e240c8f4be33 -INFO:root:PassingDataObject: nmdc:ce7da98fd8f8e273ed40ff018bc19deb INFO:root:PassingDataObject: nmdc:2c917868f2b1db5d25b821e3f0dda53e +INFO:root:PassingDataObject: nmdc:80aa19f314fa95953264159534fecc73 INFO:root:PassingDataObject: nmdc:b3fc277745ea0af909bd7c89141beb89 +INFO:root:PassingDataObject: nmdc:ce7da98fd8f8e273ed40ff018bc19deb INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, Annotation Activity for nmdc:mga0b982 -INFO:root:PassingDataObject: nmdc:8d0a516b2c5ad7c7672861b7f22a420e -INFO:root:PassingDataObject: nmdc:4002705c09de37b47c9475ca966e39e7 -INFO:root:PassingDataObject: nmdc:bff4a3264794bd3d3a70b37fe3f900ab +INFO:root:PassingDataObject: nmdc:8b68b3fa0b508d5a4dbeaf05765d5563 +INFO:root:PassingDataObject: nmdc:348132dda1f6d1ac19355b6ad41083f1 INFO:root:PassingDataObject: nmdc:47cea600142bdb6708e6a163849991b0 -INFO:root:PassingDataObject: nmdc:affc3ad57f0cfee32982502f53948b18 -INFO:root:PassingDataObject: nmdc:ecd5f0ed7de5dadcfbee52a834de8078 -INFO:root:PassingDataObject: nmdc:523ccdc00364f1582e0d481cd501734c -INFO:root:PassingDataObject: nmdc:ec5ad97a88307bb3bfb236a2e4af6ede +INFO:root:PassingDataObject: nmdc:0bdfcf5cde99009d4fbe35d074930757 INFO:root:PassingDataObject: nmdc:260a5468ab7ca9c259e98e1f58e6c2f9 -INFO:root:PassingDataObject: nmdc:348132dda1f6d1ac19355b6ad41083f1 INFO:root:PassingDataObject: nmdc:0935eafb6c0b5c01721b78a0c4f9096a -INFO:root:PassingDataObject: nmdc:8b68b3fa0b508d5a4dbeaf05765d5563 -INFO:root:PassingDataObject: nmdc:0bdfcf5cde99009d4fbe35d074930757 -INFO:root:PassingDataObject: nmdc:b2caaa74e7fe80ce5d8e021c908202cf +INFO:root:PassingDataObject: nmdc:0ffb50315aa43232a4ed7e7dbbbc7eee +INFO:root:PassingDataObject: nmdc:bff4a3264794bd3d3a70b37fe3f900ab INFO:root:PassingDataObject: nmdc:34b271c0c1d625c3b2b1975842c1f78e +INFO:root:PassingDataObject: nmdc:ecd5f0ed7de5dadcfbee52a834de8078 INFO:root:PassingDataObject: nmdc:a9206307d63d312babb06d3e4d7eb078 +INFO:root:PassingDataObject: nmdc:523ccdc00364f1582e0d481cd501734c +INFO:root:PassingDataObject: nmdc:b2caaa74e7fe80ce5d8e021c908202cf INFO:root:PassingDataObject: nmdc:83ec0ac3b4c081b68c991909a84244b3 +INFO:root:PassingDataObject: nmdc:affc3ad57f0cfee32982502f53948b18 +INFO:root:PassingDataObject: nmdc:ec5ad97a88307bb3bfb236a2e4af6ede +INFO:root:PassingDataObject: nmdc:4002705c09de37b47c9475ca966e39e7 +INFO:root:PassingDataObject: nmdc:8d0a516b2c5ad7c7672861b7f22a420e INFO:root:PassingDataObject: nmdc:406d6519ff16039c252075fafe27bb0a -INFO:root:PassingDataObject: nmdc:0ffb50315aa43232a4ed7e7dbbbc7eee INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213368 @@ -6357,56 +6357,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, ReadBased Analysis Activity for nmdc:mga02876 -INFO:root:PassingDataObject: nmdc:2aa7848845cdedec9f768c7c62845869 -INFO:root:PassingDataObject: nmdc:baed2100206fd23cf7a610c67694d54e +INFO:root:PassingDataObject: nmdc:51930ed3dc3e95f11b90f0ad0b502c3a INFO:root:PassingDataObject: nmdc:210b8c6bace8020b6d2a0d9187dc05e6 -INFO:root:PassingDataObject: nmdc:5045870e25c680ea8552596c86cd4a88 -INFO:root:PassingDataObject: nmdc:30e62c9d1efb5507560099fc9782adc5 +INFO:root:PassingDataObject: nmdc:2f17427c22ec617560cc33baaa635414 INFO:root:PassingDataObject: nmdc:e958a7799c53160c16084b704b89a8fe +INFO:root:PassingDataObject: nmdc:30e62c9d1efb5507560099fc9782adc5 INFO:root:PassingDataObject: nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 -INFO:root:PassingDataObject: nmdc:2f17427c22ec617560cc33baaa635414 -INFO:root:PassingDataObject: nmdc:51930ed3dc3e95f11b90f0ad0b502c3a +INFO:root:PassingDataObject: nmdc:5045870e25c680ea8552596c86cd4a88 +INFO:root:PassingDataObject: nmdc:baed2100206fd23cf7a610c67694d54e +INFO:root:PassingDataObject: nmdc:2aa7848845cdedec9f768c7c62845869 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, Assembly Activity for nmdc:mga02876 -INFO:root:PassingDataObject: nmdc:c1460560b9cbc220b669761d855b9755 -INFO:root:PassingDataObject: nmdc:cc58adbee49b0f26fd33bc079e27afd5 INFO:root:PassingDataObject: nmdc:80fa4789cc2dc33b4fa4070b41a4ec40 +INFO:root:PassingDataObject: nmdc:c1460560b9cbc220b669761d855b9755 INFO:root:PassingDataObject: nmdc:2c9551f1e148f31aea5270994a18d84d INFO:root:PassingDataObject: nmdc:1663c6cf4ee95f6ef34537203d31b228 +INFO:root:PassingDataObject: nmdc:cc58adbee49b0f26fd33bc079e27afd5 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, Annotation Activity for nmdc:mga02876 -INFO:root:PassingDataObject: nmdc:7cccdbcddc0189f2369d62c260d445a8 -INFO:root:PassingDataObject: nmdc:672f9e0e4f97e721cd9e3c065a5c41a9 -INFO:root:PassingDataObject: nmdc:fd6d0570e08387accbc6e9a485ad517a -INFO:root:PassingDataObject: nmdc:1e849a5e58199bca23b93ba27e886827 +INFO:root:PassingDataObject: nmdc:f13c62d5851c3eea82f7746fdfb7a975 INFO:root:PassingDataObject: nmdc:58e0fa8e0426f18fd6f5fda52b90a57d -INFO:root:PassingDataObject: nmdc:b571b5cc7bd36a23858a390d9b735b26 -INFO:root:PassingDataObject: nmdc:90cbadaff55fbe48a0d9572d0164a884 INFO:root:PassingDataObject: nmdc:c525756483d78bc9351467809d46a239 -INFO:root:PassingDataObject: nmdc:448611e58c80c7897483088723312535 -INFO:root:PassingDataObject: nmdc:e7e4b92663d921e859dc05137e3a706a +INFO:root:PassingDataObject: nmdc:84b195686836133749cd977052b28823 INFO:root:PassingDataObject: nmdc:de5e8022931b7858c02aa813028250e1 -INFO:root:PassingDataObject: nmdc:426dfb134fc98749f24075b3c86dee28 -INFO:root:PassingDataObject: nmdc:e0c40f37d5bf29776ff2fc2f53d28a73 +INFO:root:PassingDataObject: nmdc:e7e4b92663d921e859dc05137e3a706a +INFO:root:PassingDataObject: nmdc:4127ac37acbc3a1d82ae7eb1e6346393 INFO:root:PassingDataObject: nmdc:b916f9dd44880eee7c45798c6c9c9f24 INFO:root:PassingDataObject: nmdc:9135ca5cbc9b657562f3fc530b13a653 -INFO:root:PassingDataObject: nmdc:4127ac37acbc3a1d82ae7eb1e6346393 -INFO:root:PassingDataObject: nmdc:f13c62d5851c3eea82f7746fdfb7a975 +INFO:root:PassingDataObject: nmdc:b571b5cc7bd36a23858a390d9b735b26 +INFO:root:PassingDataObject: nmdc:7cccdbcddc0189f2369d62c260d445a8 +INFO:root:PassingDataObject: nmdc:fd6d0570e08387accbc6e9a485ad517a INFO:root:PassingDataObject: nmdc:848a203dce17aec5545889250590b8e9 -INFO:root:PassingDataObject: nmdc:84b195686836133749cd977052b28823 +INFO:root:PassingDataObject: nmdc:1e849a5e58199bca23b93ba27e886827 +INFO:root:PassingDataObject: nmdc:672f9e0e4f97e721cd9e3c065a5c41a9 +INFO:root:PassingDataObject: nmdc:e0c40f37d5bf29776ff2fc2f53d28a73 +INFO:root:PassingDataObject: nmdc:426dfb134fc98749f24075b3c86dee28 +INFO:root:PassingDataObject: nmdc:90cbadaff55fbe48a0d9572d0164a884 +INFO:root:PassingDataObject: nmdc:448611e58c80c7897483088723312535 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, MAGs Analysis Activity for nmdc:mga02876 -INFO:root:PassingDataObject: nmdc:3222cc01be3ed3bce7173f46777cf050 INFO:root:PassingDataObject: nmdc:3382de3722e82b3c31d728bfc730f4e2 +INFO:root:PassingDataObject: nmdc:3222cc01be3ed3bce7173f46777cf050 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213358 @@ -6425,56 +6425,56 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, ReadBased Analysis Activity for nmdc:mga0a011 -INFO:root:PassingDataObject: nmdc:5e3ff94d67160a4b9810d3c0716b676f -INFO:root:PassingDataObject: nmdc:f37c12739b50edd11198b9c0fbeed6cb -INFO:root:PassingDataObject: nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 INFO:root:PassingDataObject: nmdc:1e6d74ec82dca134de4dd3f62a4042eb -INFO:root:PassingDataObject: nmdc:02a87bccf020ebf38fa55771da1a39b8 +INFO:root:PassingDataObject: nmdc:f37c12739b50edd11198b9c0fbeed6cb INFO:root:PassingDataObject: nmdc:2221531a2bbf6cfb3ea8eb0d513ba6d6 INFO:root:PassingDataObject: nmdc:623812cb5aebbe8b96914b22f055faa9 -INFO:root:PassingDataObject: nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 +INFO:root:PassingDataObject: nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 +INFO:root:PassingDataObject: nmdc:5e3ff94d67160a4b9810d3c0716b676f INFO:root:PassingDataObject: nmdc:4f7adb75056ddd0b4e63066d322e02a2 +INFO:root:PassingDataObject: nmdc:02a87bccf020ebf38fa55771da1a39b8 +INFO:root:PassingDataObject: nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, Assembly Activity for nmdc:mga0a011 -INFO:root:PassingDataObject: nmdc:82e36fe1492818c0ec66d1cd6b545437 INFO:root:PassingDataObject: nmdc:b34b35041359938246655f6e851699dc -INFO:root:PassingDataObject: nmdc:faa801494bd5c59f2c74c8347b3919a1 INFO:root:PassingDataObject: nmdc:f732fd9bb21687e4353521ca123593f0 +INFO:root:PassingDataObject: nmdc:82e36fe1492818c0ec66d1cd6b545437 +INFO:root:PassingDataObject: nmdc:faa801494bd5c59f2c74c8347b3919a1 INFO:root:PassingDataObject: nmdc:f81bb50fba9c05745cfd298cfbe3481b INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, Annotation Activity for nmdc:mga0a011 -INFO:root:PassingDataObject: nmdc:5ee5005f63347f0672cd39f52b8efed5 -INFO:root:PassingDataObject: nmdc:a7729e03c41a8db54c473f0c489ca352 INFO:root:PassingDataObject: nmdc:a5b46c4720bf22d7001db131fcffa41b -INFO:root:PassingDataObject: nmdc:25bdb30be1d2b525db08d50a46d55a79 -INFO:root:PassingDataObject: nmdc:237047f7909000bdb8981d6adc75de29 +INFO:root:PassingDataObject: nmdc:77ffd3d047fe2c3abf68b3ccfd803422 INFO:root:PassingDataObject: nmdc:5d7a42e5bc0bbc18a802db8c1821f174 -INFO:root:PassingDataObject: nmdc:46a766a064893e42185a71a25fcf8c99 -INFO:root:PassingDataObject: nmdc:7db99bb8f1b64e4ec10cbac6aa5cccc0 +INFO:root:PassingDataObject: nmdc:89749cbcef828cf46aef71848d900e17 +INFO:root:PassingDataObject: nmdc:a7729e03c41a8db54c473f0c489ca352 +INFO:root:PassingDataObject: nmdc:25bdb30be1d2b525db08d50a46d55a79 +INFO:root:PassingDataObject: nmdc:7915b1d34443290338d24cf8de5ea7a2 INFO:root:PassingDataObject: nmdc:7675e03793bc27901da7e57f536587fa -INFO:root:PassingDataObject: nmdc:9e28fab274522e01dce3198f4c4513a0 -INFO:root:PassingDataObject: nmdc:8c8a29277943ee03a09b5707c320eb7f INFO:root:PassingDataObject: nmdc:97c002d35a3f6bffc609424118f143c8 +INFO:root:PassingDataObject: nmdc:7db99bb8f1b64e4ec10cbac6aa5cccc0 INFO:root:PassingDataObject: nmdc:5ad1673ea5dc36a01d79869333607077 -INFO:root:PassingDataObject: nmdc:26c823bbd182f04e776c7a0682faedba -INFO:root:PassingDataObject: nmdc:89749cbcef828cf46aef71848d900e17 -INFO:root:PassingDataObject: nmdc:e9095658a94960e4e4a081abc46c6c90 +INFO:root:PassingDataObject: nmdc:46a766a064893e42185a71a25fcf8c99 INFO:root:PassingDataObject: nmdc:e6202f3679b765971c4452aef9b29f44 -INFO:root:PassingDataObject: nmdc:7915b1d34443290338d24cf8de5ea7a2 -INFO:root:PassingDataObject: nmdc:77ffd3d047fe2c3abf68b3ccfd803422 +INFO:root:PassingDataObject: nmdc:e9095658a94960e4e4a081abc46c6c90 +INFO:root:PassingDataObject: nmdc:5ee5005f63347f0672cd39f52b8efed5 +INFO:root:PassingDataObject: nmdc:9e28fab274522e01dce3198f4c4513a0 +INFO:root:PassingDataObject: nmdc:8c8a29277943ee03a09b5707c320eb7f +INFO:root:PassingDataObject: nmdc:26c823bbd182f04e776c7a0682faedba +INFO:root:PassingDataObject: nmdc:237047f7909000bdb8981d6adc75de29 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, MAGs Analysis Activity for nmdc:mga0a011 -INFO:root:PassingDataObject: nmdc:8c94863ea1acf7676728bf4f6df6465e INFO:root:PassingDataObject: nmdc:6a90b2297850f65afbe3a4d99407aec8 +INFO:root:PassingDataObject: nmdc:8c94863ea1acf7676728bf4f6df6465e INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213367 @@ -6486,63 +6486,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8224d0f7d3ceb19 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, Read QC Activity for nmdc:mga0g890 -INFO:root:PassingDataObject: nmdc:c814bd445b03eaebf8e184d7fd15b373 INFO:root:PassingDataObject: nmdc:0fcfd647558a4ef62478c90adde51806 +INFO:root:PassingDataObject: nmdc:c814bd445b03eaebf8e184d7fd15b373 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, ReadBased Analysis Activity for nmdc:mga0g890 -INFO:root:PassingDataObject: nmdc:4d1250a731e6492e6178e5b20a7b8a2a -INFO:root:PassingDataObject: nmdc:76786ed3956bbfbdefe27f0b6dd3b41a -INFO:root:PassingDataObject: nmdc:3d76ff87998c13818880d0316b63187f -INFO:root:PassingDataObject: nmdc:9e2ace15f115399d01070d31b2cb3275 INFO:root:PassingDataObject: nmdc:a1175e66c5db74cf3dfe12efdaf692c5 -INFO:root:PassingDataObject: nmdc:5ff551f313326d2d99f41215faccc3b4 +INFO:root:PassingDataObject: nmdc:9e2ace15f115399d01070d31b2cb3275 INFO:root:PassingDataObject: nmdc:6b6185a5e796df1bcfb6096ad89a7aac -INFO:root:PassingDataObject: nmdc:fd8b08b0c9c805f39331087692e6be41 INFO:root:PassingDataObject: nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 +INFO:root:PassingDataObject: nmdc:5ff551f313326d2d99f41215faccc3b4 +INFO:root:PassingDataObject: nmdc:76786ed3956bbfbdefe27f0b6dd3b41a +INFO:root:PassingDataObject: nmdc:4d1250a731e6492e6178e5b20a7b8a2a +INFO:root:PassingDataObject: nmdc:3d76ff87998c13818880d0316b63187f +INFO:root:PassingDataObject: nmdc:fd8b08b0c9c805f39331087692e6be41 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, Assembly Activity for nmdc:mga0g890 -INFO:root:PassingDataObject: nmdc:347aa6885ede562646eb8d9b2177999b INFO:root:PassingDataObject: nmdc:c86720388b57a8560fd9175da9b85c8b -INFO:root:PassingDataObject: nmdc:041cd4f4fc2739f7bff0df87bf82135c INFO:root:PassingDataObject: nmdc:cd28211d3f934b43916c5e73819bc8b6 INFO:root:PassingDataObject: nmdc:ba3d490fab94cd5694233e6e3f42c718 +INFO:root:PassingDataObject: nmdc:041cd4f4fc2739f7bff0df87bf82135c +INFO:root:PassingDataObject: nmdc:347aa6885ede562646eb8d9b2177999b INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, Annotation Activity for nmdc:mga0g890 -INFO:root:PassingDataObject: nmdc:e736a7b0ff975173bbdf3e304c992731 -INFO:root:PassingDataObject: nmdc:6cb6f44b08ddfc566f2920686b15509a +INFO:root:PassingDataObject: nmdc:b9cbec3108384e14dc749aab6c11b572 +INFO:root:PassingDataObject: nmdc:4b678b348b8ebe049918b33d884fab18 +INFO:root:PassingDataObject: nmdc:243895228650ce5c2df95d146a705031 +INFO:root:PassingDataObject: nmdc:4388a163c40cbca30ccd7f000252165e +INFO:root:PassingDataObject: nmdc:ea815d0d2c38cb43017b70aab4607f4b +INFO:root:PassingDataObject: nmdc:d84fd73a8fb159574f204d14af721459 INFO:root:PassingDataObject: nmdc:85046d9a0adb3a813cc98e5bae3ec767 INFO:root:PassingDataObject: nmdc:efd6dcc40be496e8aae713d1e05b8374 -INFO:root:PassingDataObject: nmdc:2a39dd8cb7abff4fccfd61da4a89c656 INFO:root:PassingDataObject: nmdc:19edc3de14e8605c67173a6a6efcd7fd -INFO:root:PassingDataObject: nmdc:4388a163c40cbca30ccd7f000252165e -INFO:root:PassingDataObject: nmdc:0347062034eed88d5c2430525f01dd6c -INFO:root:PassingDataObject: nmdc:4fd86475ac563a0274f77e89f7b7d43d -INFO:root:PassingDataObject: nmdc:ea815d0d2c38cb43017b70aab4607f4b +INFO:root:PassingDataObject: nmdc:5f1fa0e7edbb0f7d478bcef76214f98a INFO:root:PassingDataObject: nmdc:0b98196372ad273ee61b4d7c1f7c7162 -INFO:root:PassingDataObject: nmdc:b9cbec3108384e14dc749aab6c11b572 -INFO:root:PassingDataObject: nmdc:b0d33aefbc001b9ec4193d4d4d9ac9b7 INFO:root:PassingDataObject: nmdc:9caa047b55d3a7ec23c481ef5645fdb1 -INFO:root:PassingDataObject: nmdc:243895228650ce5c2df95d146a705031 INFO:root:PassingDataObject: nmdc:4a6e03ecaba73692a2395296fc6c6c74 -INFO:root:PassingDataObject: nmdc:5f1fa0e7edbb0f7d478bcef76214f98a -INFO:root:PassingDataObject: nmdc:d84fd73a8fb159574f204d14af721459 -INFO:root:PassingDataObject: nmdc:4b678b348b8ebe049918b33d884fab18 +INFO:root:PassingDataObject: nmdc:6cb6f44b08ddfc566f2920686b15509a +INFO:root:PassingDataObject: nmdc:4fd86475ac563a0274f77e89f7b7d43d +INFO:root:PassingDataObject: nmdc:e736a7b0ff975173bbdf3e304c992731 +INFO:root:PassingDataObject: nmdc:b0d33aefbc001b9ec4193d4d4d9ac9b7 +INFO:root:PassingDataObject: nmdc:2a39dd8cb7abff4fccfd61da4a89c656 +INFO:root:PassingDataObject: nmdc:0347062034eed88d5c2430525f01dd6c INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, MAGs Analysis Activity for nmdc:mga0g890 -INFO:root:PassingDataObject: nmdc:cc1aa524fd9fb308a0322719876b24fa INFO:root:PassingDataObject: nmdc:58f999ff780ef3f296e92d134bb79c28 +INFO:root:PassingDataObject: nmdc:cc1aa524fd9fb308a0322719876b24fa INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213362 @@ -6554,56 +6554,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7f57dcee7abd661 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, Read QC Activity for nmdc:mga0sg75 -INFO:root:PassingDataObject: nmdc:bcce93bb0809075db70107e52527904b INFO:root:PassingDataObject: nmdc:1cf3465f614f908cc61b9b62ba714a93 +INFO:root:PassingDataObject: nmdc:bcce93bb0809075db70107e52527904b INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, ReadBased Analysis Activity for nmdc:mga0sg75 -INFO:root:PassingDataObject: nmdc:946779b32f4331010418fc96cff2f925 +INFO:root:PassingDataObject: nmdc:dccd678c9dd9a2428504d7545a50103a INFO:root:PassingDataObject: nmdc:1271e977d7a7a2ddb6e8b6938bc258c5 -INFO:root:PassingDataObject: nmdc:26b6c91419fcc609e866b73ff56b4b3b +INFO:root:PassingDataObject: nmdc:ab514bf7bf2e5dfb097c4e51fb6acb00 +INFO:root:PassingDataObject: nmdc:48c49d2858dc9a27b6a70536cfabbf5c INFO:root:PassingDataObject: nmdc:f813e000a7d850611c67693832ce01fd INFO:root:PassingDataObject: nmdc:339c19187baa0181fad7ef791a234e81 -INFO:root:PassingDataObject: nmdc:ab514bf7bf2e5dfb097c4e51fb6acb00 -INFO:root:PassingDataObject: nmdc:dccd678c9dd9a2428504d7545a50103a +INFO:root:PassingDataObject: nmdc:26b6c91419fcc609e866b73ff56b4b3b INFO:root:PassingDataObject: nmdc:674982933948d744a2ea5cb87c036a0b -INFO:root:PassingDataObject: nmdc:48c49d2858dc9a27b6a70536cfabbf5c +INFO:root:PassingDataObject: nmdc:946779b32f4331010418fc96cff2f925 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, Assembly Activity for nmdc:mga0sg75 -INFO:root:PassingDataObject: nmdc:4a44c67df49dc0759a43055569666b1d -INFO:root:PassingDataObject: nmdc:ba4600ecc237f19486cd331e2ab392a3 -INFO:root:PassingDataObject: nmdc:a480d869895931d6403768b88344feba INFO:root:PassingDataObject: nmdc:f64a242f72ed6f8eacf286221775cce3 +INFO:root:PassingDataObject: nmdc:ba4600ecc237f19486cd331e2ab392a3 INFO:root:PassingDataObject: nmdc:05d0bc222b1bb08092c97aa1694a9827 +INFO:root:PassingDataObject: nmdc:a480d869895931d6403768b88344feba +INFO:root:PassingDataObject: nmdc:4a44c67df49dc0759a43055569666b1d INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, Annotation Activity for nmdc:mga0sg75 +INFO:root:PassingDataObject: nmdc:2e52a002841d064415d945a6423b885c INFO:root:PassingDataObject: nmdc:1f6763c8022761b11e243c22d399eb76 -INFO:root:PassingDataObject: nmdc:fe6d23ca26263913bfa5bc42e557789e -INFO:root:PassingDataObject: nmdc:f7cef18b4c51a17a955e292c058027ea -INFO:root:PassingDataObject: nmdc:2a87b22aa3a018d516f50d364faaa678 -INFO:root:PassingDataObject: nmdc:801e749f0faeb2cb890dc8a75166d65f -INFO:root:PassingDataObject: nmdc:fbfbaf47b5ee3b9ce5c0f4ff58d8b90d INFO:root:PassingDataObject: nmdc:8c9c427e3df26a1f0d3f86136dcd3102 -INFO:root:PassingDataObject: nmdc:47d229cac79dca2f3fe4b11a50544d7a -INFO:root:PassingDataObject: nmdc:0b0396569882306cec3167123aaaf42e -INFO:root:PassingDataObject: nmdc:0a59d0d000d40a0c3f4a7199d0acc43e INFO:root:PassingDataObject: nmdc:b2c9958ee0fd716cecbf8e70c3cd5d3d -INFO:root:PassingDataObject: nmdc:e167a88f85ddc119999795c2231abecd +INFO:root:PassingDataObject: nmdc:0b0396569882306cec3167123aaaf42e +INFO:root:PassingDataObject: nmdc:801e749f0faeb2cb890dc8a75166d65f +INFO:root:PassingDataObject: nmdc:0b9682601706854c16b2b6311285e5bb +INFO:root:PassingDataObject: nmdc:8a9efc2dcc704445bc29ae43fbeb2581 +INFO:root:PassingDataObject: nmdc:fbfbaf47b5ee3b9ce5c0f4ff58d8b90d INFO:root:PassingDataObject: nmdc:bbfee71a35c2a6a2ab5888f4c9976f0f INFO:root:PassingDataObject: nmdc:80de41593586d33be41f4e901594b07c +INFO:root:PassingDataObject: nmdc:e167a88f85ddc119999795c2231abecd +INFO:root:PassingDataObject: nmdc:2a87b22aa3a018d516f50d364faaa678 +INFO:root:PassingDataObject: nmdc:47d229cac79dca2f3fe4b11a50544d7a +INFO:root:PassingDataObject: nmdc:0a59d0d000d40a0c3f4a7199d0acc43e INFO:root:PassingDataObject: nmdc:d707c7fa40a3e4569422def7a059d87c -INFO:root:PassingDataObject: nmdc:2e52a002841d064415d945a6423b885c -INFO:root:PassingDataObject: nmdc:8a9efc2dcc704445bc29ae43fbeb2581 -INFO:root:PassingDataObject: nmdc:0b9682601706854c16b2b6311285e5bb INFO:root:PassingDataObject: nmdc:7498ad8e88b071a3ebab9f911eb43dd9 +INFO:root:PassingDataObject: nmdc:f7cef18b4c51a17a955e292c058027ea +INFO:root:PassingDataObject: nmdc:fe6d23ca26263913bfa5bc42e557789e INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213370 @@ -6629,49 +6629,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213363 INFO:root:found 1 records INFO:root:record: nmdc:65077a8ef5daf8f61d7ca440f788381e, ReadBased Analysis Activity for nmdc:mga0wn63 -INFO:root:PassingDataObject: nmdc:474fc04537d441bf10248448601b98c5 +INFO:root:PassingDataObject: nmdc:0bdd42a6d86423fea126edeba1482438 +INFO:root:PassingDataObject: nmdc:b862fdc0569c76739f06e4dedb1f96ae INFO:root:PassingDataObject: nmdc:6a38e1214509fb756019f5aa6efa06cb -INFO:root:PassingDataObject: nmdc:826950b35dda3575c9b22162aca0456a -INFO:root:PassingDataObject: nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 +INFO:root:PassingDataObject: nmdc:deb626bf8459ffb29623c12aab935b9b INFO:root:PassingDataObject: nmdc:de681291a4806cada5a435b0a268bbc5 -INFO:root:PassingDataObject: nmdc:b862fdc0569c76739f06e4dedb1f96ae -INFO:root:PassingDataObject: nmdc:0bdd42a6d86423fea126edeba1482438 +INFO:root:PassingDataObject: nmdc:474fc04537d441bf10248448601b98c5 +INFO:root:PassingDataObject: nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 +INFO:root:PassingDataObject: nmdc:826950b35dda3575c9b22162aca0456a INFO:root:PassingDataObject: nmdc:2732870d58f60e64a60c05f499e8ea32 -INFO:root:PassingDataObject: nmdc:deb626bf8459ffb29623c12aab935b9b INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213363 INFO:root:found 1 records INFO:root:record: nmdc:65077a8ef5daf8f61d7ca440f788381e, Assembly Activity for nmdc:mga0wn63 -INFO:root:PassingDataObject: nmdc:6735368c34cd89f88883ba8be1435281 +INFO:root:PassingDataObject: nmdc:eacb484bf0df0ac443d61bb462348714 INFO:root:PassingDataObject: nmdc:2f5d1924e8ac016a3cc58bcf5447f319 +INFO:root:PassingDataObject: nmdc:6735368c34cd89f88883ba8be1435281 INFO:root:PassingDataObject: nmdc:65f0a55ac61f5d41f2cc4c8fd7119400 -INFO:root:PassingDataObject: nmdc:eacb484bf0df0ac443d61bb462348714 INFO:root:PassingDataObject: nmdc:2876f90fb777b0870060aeab0d8d6805 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213363 INFO:root:found 1 records INFO:root:record: nmdc:65077a8ef5daf8f61d7ca440f788381e, Annotation Activity for nmdc:mga0wn63 -INFO:root:PassingDataObject: nmdc:465d7bf895237e0a3ff9e018fc1b4fc1 -INFO:root:PassingDataObject: nmdc:bc904b8997150f898d444c8ab1e61ddb INFO:root:PassingDataObject: nmdc:6e5375fc7a27dfbf579953febc9f843e -INFO:root:PassingDataObject: nmdc:90df09361f17030d2dd4d736ec911276 -INFO:root:PassingDataObject: nmdc:af911c47eb5f5b2d843d7735260a2ba4 INFO:root:PassingDataObject: nmdc:3356e815d894820daee0aa5ce8041ef2 -INFO:root:PassingDataObject: nmdc:15d1b4dea64583add0b70d734ea27c97 -INFO:root:PassingDataObject: nmdc:c634e84393e4b5bc6f2fd3560d32a270 -INFO:root:PassingDataObject: nmdc:17950ef98b98f293449f903f6f11a864 INFO:root:PassingDataObject: nmdc:bd8f249bf366388a6bf736e47b14c8a9 -INFO:root:PassingDataObject: nmdc:2c67e6940560423a67d09699d3209563 +INFO:root:PassingDataObject: nmdc:af911c47eb5f5b2d843d7735260a2ba4 +INFO:root:PassingDataObject: nmdc:56b7b6093cf46475828511b24fffa8b9 +INFO:root:PassingDataObject: nmdc:465d7bf895237e0a3ff9e018fc1b4fc1 +INFO:root:PassingDataObject: nmdc:21d35e3e99cf31ebde2f3fee5c3fde83 INFO:root:PassingDataObject: nmdc:ceccd142de7ee774d17118dec4861f51 +INFO:root:PassingDataObject: nmdc:90df09361f17030d2dd4d736ec911276 INFO:root:PassingDataObject: nmdc:287793a4fa3f9314d9a2ffa3f999914c INFO:root:PassingDataObject: nmdc:a157a9fefff8a4970f75e67e3e943410 -INFO:root:PassingDataObject: nmdc:56b7b6093cf46475828511b24fffa8b9 -INFO:root:PassingDataObject: nmdc:21d35e3e99cf31ebde2f3fee5c3fde83 +INFO:root:PassingDataObject: nmdc:bc904b8997150f898d444c8ab1e61ddb +INFO:root:PassingDataObject: nmdc:2c67e6940560423a67d09699d3209563 INFO:root:PassingDataObject: nmdc:a08890b6101ad34ce3c1459ce38b44a4 +INFO:root:PassingDataObject: nmdc:c634e84393e4b5bc6f2fd3560d32a270 INFO:root:PassingDataObject: nmdc:9edede937565642174df613def8ec31e +INFO:root:PassingDataObject: nmdc:15d1b4dea64583add0b70d734ea27c97 INFO:root:PassingDataObject: nmdc:b4eab4799929060589bd121b04c6a093 +INFO:root:PassingDataObject: nmdc:17950ef98b98f293449f903f6f11a864 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213363 @@ -6697,49 +6697,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213365 INFO:root:found 1 records INFO:root:record: nmdc:62d798b0bc7f186c279aed20d9dfe0d0, ReadBased Analysis Activity for nmdc:mga0pv39 -INFO:root:PassingDataObject: nmdc:0ba6b3b97535f8a5aff0eef041442f32 -INFO:root:PassingDataObject: nmdc:95d67ace97bf6b69ae023b0925c01abf -INFO:root:PassingDataObject: nmdc:d1069317969e0bf58d4b35572c7fef1c +INFO:root:PassingDataObject: nmdc:a308ef6c9a3b0f1054752cad8ad71596 INFO:root:PassingDataObject: nmdc:83e7f3a3f086352e8a82d204534ada68 -INFO:root:PassingDataObject: nmdc:0674278738def7a9236bd7835dec3560 -INFO:root:PassingDataObject: nmdc:10d3cf3416ffabbfc57ef646dfef5794 -INFO:root:PassingDataObject: nmdc:b17d51b78c9968df0408febb80cc9b00 +INFO:root:PassingDataObject: nmdc:d1069317969e0bf58d4b35572c7fef1c INFO:root:PassingDataObject: nmdc:901f4ef845f6b1a8b2f7c86702e3cae0 -INFO:root:PassingDataObject: nmdc:a308ef6c9a3b0f1054752cad8ad71596 +INFO:root:PassingDataObject: nmdc:b17d51b78c9968df0408febb80cc9b00 +INFO:root:PassingDataObject: nmdc:95d67ace97bf6b69ae023b0925c01abf +INFO:root:PassingDataObject: nmdc:10d3cf3416ffabbfc57ef646dfef5794 +INFO:root:PassingDataObject: nmdc:0674278738def7a9236bd7835dec3560 +INFO:root:PassingDataObject: nmdc:0ba6b3b97535f8a5aff0eef041442f32 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213365 INFO:root:found 1 records INFO:root:record: nmdc:62d798b0bc7f186c279aed20d9dfe0d0, Assembly Activity for nmdc:mga0pv39 -INFO:root:PassingDataObject: nmdc:9c80d763b2a6f29018c4b38bcc832c1d +INFO:root:PassingDataObject: nmdc:fd297c98e93c06074df6bee8a256f016 INFO:root:PassingDataObject: nmdc:9ec78c306d5efffc28a6b338b0f41e40 -INFO:root:PassingDataObject: nmdc:7e73261a152ca81e49124f8eb6dd8271 INFO:root:PassingDataObject: nmdc:5568d32425fac01abdcc941bdbf7cb09 -INFO:root:PassingDataObject: nmdc:fd297c98e93c06074df6bee8a256f016 +INFO:root:PassingDataObject: nmdc:7e73261a152ca81e49124f8eb6dd8271 +INFO:root:PassingDataObject: nmdc:9c80d763b2a6f29018c4b38bcc832c1d INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213365 INFO:root:found 1 records INFO:root:record: nmdc:62d798b0bc7f186c279aed20d9dfe0d0, Annotation Activity for nmdc:mga0pv39 -INFO:root:PassingDataObject: nmdc:b57cafda4884e074f535261fe2e967db -INFO:root:PassingDataObject: nmdc:f815c96625f4b3902f33ec4f786f4b03 +INFO:root:PassingDataObject: nmdc:f6ab0425e657421c1180818210f55189 +INFO:root:PassingDataObject: nmdc:3ba1226b44634c3b0bd7fce0e7fce543 +INFO:root:PassingDataObject: nmdc:837dcb5523c3790688dd77c9ddaf1ead +INFO:root:PassingDataObject: nmdc:fca7538e7493c935b1665a4d3d3dad8b +INFO:root:PassingDataObject: nmdc:653902ec3dc6ae352e30a89d96b14ec6 INFO:root:PassingDataObject: nmdc:cb4b8fda55b5f88cd4306a6f06807dc9 -INFO:root:PassingDataObject: nmdc:d232118ab80ad7d376775dc8e27d2a34 -INFO:root:PassingDataObject: nmdc:2b8c4db58a21ba5d27f0e7b3f014ff24 INFO:root:PassingDataObject: nmdc:52444aa9467812958781720f60d294c2 INFO:root:PassingDataObject: nmdc:74a38e65cd786fe5fb42b6b307006993 -INFO:root:PassingDataObject: nmdc:2c31bfd708bf121478447b526a2463df -INFO:root:PassingDataObject: nmdc:04a5ec64fb23b602b41b858e89caac44 +INFO:root:PassingDataObject: nmdc:ba9c4479aceacb0bbf72cf66b80897a2 +INFO:root:PassingDataObject: nmdc:eebaed2d2af3dcf8c4dde6f1afa4be4b +INFO:root:PassingDataObject: nmdc:2b8c4db58a21ba5d27f0e7b3f014ff24 +INFO:root:PassingDataObject: nmdc:b57cafda4884e074f535261fe2e967db INFO:root:PassingDataObject: nmdc:f97d663a623196efbd6fb962cbcb3f0f +INFO:root:PassingDataObject: nmdc:f815c96625f4b3902f33ec4f786f4b03 INFO:root:PassingDataObject: nmdc:4f05aa5c790bb7e3c9018ee77873700c -INFO:root:PassingDataObject: nmdc:f6ab0425e657421c1180818210f55189 -INFO:root:PassingDataObject: nmdc:653902ec3dc6ae352e30a89d96b14ec6 -INFO:root:PassingDataObject: nmdc:3ba1226b44634c3b0bd7fce0e7fce543 +INFO:root:PassingDataObject: nmdc:d232118ab80ad7d376775dc8e27d2a34 INFO:root:PassingDataObject: nmdc:53f7d9fa5c8d03b0c27d13c891324f0c -INFO:root:PassingDataObject: nmdc:fca7538e7493c935b1665a4d3d3dad8b -INFO:root:PassingDataObject: nmdc:837dcb5523c3790688dd77c9ddaf1ead -INFO:root:PassingDataObject: nmdc:eebaed2d2af3dcf8c4dde6f1afa4be4b -INFO:root:PassingDataObject: nmdc:ba9c4479aceacb0bbf72cf66b80897a2 +INFO:root:PassingDataObject: nmdc:2c31bfd708bf121478447b526a2463df +INFO:root:PassingDataObject: nmdc:04a5ec64fb23b602b41b858e89caac44 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213365 @@ -6765,15 +6765,15 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213373 INFO:root:found 1 records INFO:root:record: nmdc:a6cc148c5ad2c97018dd77beff58ffe3, ReadBased Analysis Activity for nmdc:mga0cv29 -INFO:root:PassingDataObject: nmdc:f068fba7ce9a1b7af877a0a49d5948a2 -INFO:root:PassingDataObject: nmdc:a76377ff252e930286d7f4a7e13103b4 -INFO:root:PassingDataObject: nmdc:00fafd896809d58767b902d1c5915db8 -INFO:root:PassingDataObject: nmdc:9b64574b49b04ae5e4e4e5b43d7d274b INFO:root:PassingDataObject: nmdc:981fa88038f8c9863c4c07a68491b9d8 -INFO:root:PassingDataObject: nmdc:71336e0a19a89c8826ee4fce1620ede2 INFO:root:PassingDataObject: nmdc:3e3820736b404c3ae54aefcd887eaaad INFO:root:PassingDataObject: nmdc:32c79918dafb7609623d1f23dc7b4bc5 +INFO:root:PassingDataObject: nmdc:a76377ff252e930286d7f4a7e13103b4 +INFO:root:PassingDataObject: nmdc:9b64574b49b04ae5e4e4e5b43d7d274b INFO:root:PassingDataObject: nmdc:bd406700f630317282ce5bca93db8e01 +INFO:root:PassingDataObject: nmdc:f068fba7ce9a1b7af877a0a49d5948a2 +INFO:root:PassingDataObject: nmdc:71336e0a19a89c8826ee4fce1620ede2 +INFO:root:PassingDataObject: nmdc:00fafd896809d58767b902d1c5915db8 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213373 @@ -6789,32 +6789,32 @@ INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213373 INFO:root:found 1 records INFO:root:record: nmdc:a6cc148c5ad2c97018dd77beff58ffe3, Annotation Activity for nmdc:mga0cv29 -INFO:root:PassingDataObject: nmdc:4954833731d1127cf8534c41d818eeb8 -INFO:root:PassingDataObject: nmdc:70e15cb0b0c77001c799ffffe3937913 -INFO:root:PassingDataObject: nmdc:5b429872068a206e02eedda75c2745a1 -INFO:root:PassingDataObject: nmdc:fdec31e757bd5dbe50c58a260d6b9e2c -INFO:root:PassingDataObject: nmdc:80b7c187937b07c605f25b7bb3b1bbb6 -INFO:root:PassingDataObject: nmdc:48768c67885ee635cd54ba7c7ad29af4 -INFO:root:PassingDataObject: nmdc:5c578af7643804741c9b2a6ef55718bf -INFO:root:PassingDataObject: nmdc:243263b36fac5e47614e1bd701b7b672 INFO:root:PassingDataObject: nmdc:b5ba1cef405120528b12716131ba14c5 -INFO:root:PassingDataObject: nmdc:2a884495ab5fadb06ba73bcc302562a1 -INFO:root:PassingDataObject: nmdc:f57e71a810914f7d1c98e4dde0db7a97 INFO:root:PassingDataObject: nmdc:fc6b427dd9fa038fe52606f775141d96 INFO:root:PassingDataObject: nmdc:0dab4804a1d579f66583a763aef430f9 +INFO:root:PassingDataObject: nmdc:5c578af7643804741c9b2a6ef55718bf INFO:root:PassingDataObject: nmdc:537130f377ed7f6acbeba3270e71e9b1 +INFO:root:PassingDataObject: nmdc:4954833731d1127cf8534c41d818eeb8 INFO:root:PassingDataObject: nmdc:180d5621366fa5eb7834e49db8fd7bdf -INFO:root:PassingDataObject: nmdc:e34b50277d970406898e33693b196b4c +INFO:root:PassingDataObject: nmdc:243263b36fac5e47614e1bd701b7b672 +INFO:root:PassingDataObject: nmdc:5b429872068a206e02eedda75c2745a1 +INFO:root:PassingDataObject: nmdc:70e15cb0b0c77001c799ffffe3937913 INFO:root:PassingDataObject: nmdc:3ef761462fedd55662068c63702dad2c +INFO:root:PassingDataObject: nmdc:80b7c187937b07c605f25b7bb3b1bbb6 +INFO:root:PassingDataObject: nmdc:48768c67885ee635cd54ba7c7ad29af4 +INFO:root:PassingDataObject: nmdc:e34b50277d970406898e33693b196b4c +INFO:root:PassingDataObject: nmdc:2a884495ab5fadb06ba73bcc302562a1 INFO:root:PassingDataObject: nmdc:938f440487dbb16fef64ad1783a8deb9 +INFO:root:PassingDataObject: nmdc:fdec31e757bd5dbe50c58a260d6b9e2c +INFO:root:PassingDataObject: nmdc:f57e71a810914f7d1c98e4dde0db7a97 INFO:root:PassingDataObject: nmdc:4ab467d00c2802f9f9b06477acce4240 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213373 INFO:root:found 1 records INFO:root:record: nmdc:a6cc148c5ad2c97018dd77beff58ffe3, MAGs Analysis Activity for nmdc:mga0cv29 -INFO:root:PassingDataObject: nmdc:399ee176a5bee193c62aea76491bc88b INFO:root:PassingDataObject: nmdc:e789d66f5e52c4c6c0d06254f98735a5 +INFO:root:PassingDataObject: nmdc:399ee176a5bee193c62aea76491bc88b INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213373 @@ -6826,56 +6826,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:452104acaf8a6d0 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, Read QC Activity for nmdc:mga05q34 -INFO:root:PassingDataObject: nmdc:634a6e9a9da99acbce8e2c6d3ca65eab INFO:root:PassingDataObject: nmdc:04724f44f395f5cbfb6abcf8cc3222a6 +INFO:root:PassingDataObject: nmdc:634a6e9a9da99acbce8e2c6d3ca65eab INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, ReadBased Analysis Activity for nmdc:mga05q34 -INFO:root:PassingDataObject: nmdc:264bbbabc0400e955a1ee47b23899b85 -INFO:root:PassingDataObject: nmdc:26245482f5eda14a16009f36c78a468a INFO:root:PassingDataObject: nmdc:7917ca1612bc2183c379fd41630fc868 -INFO:root:PassingDataObject: nmdc:8fdf29ba4cc43ca7736c46067a9f3351 +INFO:root:PassingDataObject: nmdc:26245482f5eda14a16009f36c78a468a +INFO:root:PassingDataObject: nmdc:4afce32f5922f3d24974731cffa0e072 INFO:root:PassingDataObject: nmdc:cc821ed55b3013746236929f35c07653 +INFO:root:PassingDataObject: nmdc:28a110a5930d4437e661d088fccd2e5b INFO:root:PassingDataObject: nmdc:5c31fd3626fcc7433c2ca7ec8cc7d5be -INFO:root:PassingDataObject: nmdc:4afce32f5922f3d24974731cffa0e072 +INFO:root:PassingDataObject: nmdc:8fdf29ba4cc43ca7736c46067a9f3351 +INFO:root:PassingDataObject: nmdc:264bbbabc0400e955a1ee47b23899b85 INFO:root:PassingDataObject: nmdc:c1de94e79e1c2712b2de6a06043f3c6c -INFO:root:PassingDataObject: nmdc:28a110a5930d4437e661d088fccd2e5b INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, Assembly Activity for nmdc:mga05q34 -INFO:root:PassingDataObject: nmdc:36bbbe90278c8b6e8004bd4930e8b27d +INFO:root:PassingDataObject: nmdc:81d6d8b2bc024d33b02c2bbfaf893e43 INFO:root:PassingDataObject: nmdc:c127fb0bfbbb33cecda3574d1506dc1a +INFO:root:PassingDataObject: nmdc:36bbbe90278c8b6e8004bd4930e8b27d INFO:root:PassingDataObject: nmdc:5ad64c80eb358337a7eab45d7afbf150 INFO:root:PassingDataObject: nmdc:1eb1dda732d8ea0bfc97e1c0dc1e3dab -INFO:root:PassingDataObject: nmdc:81d6d8b2bc024d33b02c2bbfaf893e43 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, Annotation Activity for nmdc:mga05q34 -INFO:root:PassingDataObject: nmdc:206fba5bc806352f03f87e3b6547f0e8 -INFO:root:PassingDataObject: nmdc:a11704d57cad5ce52b69cfe208bd4a40 -INFO:root:PassingDataObject: nmdc:df8057461f8382d78bcee2563514d7a0 -INFO:root:PassingDataObject: nmdc:357ef3a7ce3fca0538c9febab1106eb9 -INFO:root:PassingDataObject: nmdc:4d4c0ef848024340135b4ad22a645fff -INFO:root:PassingDataObject: nmdc:65ccef80c31933950a5ff1e06c698dc5 -INFO:root:PassingDataObject: nmdc:37575d20b275957091aa398829aeeffe -INFO:root:PassingDataObject: nmdc:ec48857d722a2c9c5925ad03c899ea4f -INFO:root:PassingDataObject: nmdc:2e4480d5ee1f1667933f4fde133f09b4 INFO:root:PassingDataObject: nmdc:99eee9a1e46d9570eb9ac50dc1e34c51 -INFO:root:PassingDataObject: nmdc:f4f5c43f6ac5c841457d34e51edb3c14 +INFO:root:PassingDataObject: nmdc:b5a374a2ba59c7c3386df96e17464e89 +INFO:root:PassingDataObject: nmdc:2e4480d5ee1f1667933f4fde133f09b4 +INFO:root:PassingDataObject: nmdc:8324e5914a74729265d91b86072e44c9 INFO:root:PassingDataObject: nmdc:c59ff02e1296ebede3ab1288deca94aa -INFO:root:PassingDataObject: nmdc:5babec2c82806d7c5f93b7745665f9b0 +INFO:root:PassingDataObject: nmdc:37575d20b275957091aa398829aeeffe +INFO:root:PassingDataObject: nmdc:4d4c0ef848024340135b4ad22a645fff +INFO:root:PassingDataObject: nmdc:85290045aafd508270f58d049f9fa307 +INFO:root:PassingDataObject: nmdc:357ef3a7ce3fca0538c9febab1106eb9 +INFO:root:PassingDataObject: nmdc:65ccef80c31933950a5ff1e06c698dc5 +INFO:root:PassingDataObject: nmdc:206fba5bc806352f03f87e3b6547f0e8 INFO:root:PassingDataObject: nmdc:f12487646199aa24c13881ad5748427c -INFO:root:PassingDataObject: nmdc:8324e5914a74729265d91b86072e44c9 -INFO:root:PassingDataObject: nmdc:8dcdb339ac8f6f47bcfcfbfa9531c4bd +INFO:root:PassingDataObject: nmdc:f4f5c43f6ac5c841457d34e51edb3c14 +INFO:root:PassingDataObject: nmdc:a11704d57cad5ce52b69cfe208bd4a40 INFO:root:PassingDataObject: nmdc:d10f6951e1df86cf074cc374fe48fb5c -INFO:root:PassingDataObject: nmdc:85290045aafd508270f58d049f9fa307 -INFO:root:PassingDataObject: nmdc:b5a374a2ba59c7c3386df96e17464e89 +INFO:root:PassingDataObject: nmdc:8dcdb339ac8f6f47bcfcfbfa9531c4bd +INFO:root:PassingDataObject: nmdc:ec48857d722a2c9c5925ad03c899ea4f +INFO:root:PassingDataObject: nmdc:5babec2c82806d7c5f93b7745665f9b0 +INFO:root:PassingDataObject: nmdc:df8057461f8382d78bcee2563514d7a0 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213375 @@ -6894,56 +6894,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:340ba2dc2e14b38 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, Read QC Activity for nmdc:mga02682 -INFO:root:PassingDataObject: nmdc:6be4dde34892f494951c3aa6b1ef20f5 INFO:root:PassingDataObject: nmdc:9574a9d240faa7d14b437a54f781aae5 +INFO:root:PassingDataObject: nmdc:6be4dde34892f494951c3aa6b1ef20f5 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, ReadBased Analysis Activity for nmdc:mga02682 INFO:root:PassingDataObject: nmdc:31763cdf3ec24a41415be8fe6b8a74f0 +INFO:root:PassingDataObject: nmdc:2736512ac9420d3b84d858f8a6498b14 INFO:root:PassingDataObject: nmdc:875dd6dee6a4037f6b8e1f9ddca12adb -INFO:root:PassingDataObject: nmdc:8009808473b4d07d26158a4b78e5adc6 INFO:root:PassingDataObject: nmdc:39b61c73ee7a96e6ed87665e511a5c36 +INFO:root:PassingDataObject: nmdc:80bd31c1a4547a82af98201bce0a62cb +INFO:root:PassingDataObject: nmdc:8009808473b4d07d26158a4b78e5adc6 INFO:root:PassingDataObject: nmdc:aa45d91d913487c869787b2b0f212cff -INFO:root:PassingDataObject: nmdc:80bd31c1a4547a82af98201bce0a62cb -INFO:root:PassingDataObject: nmdc:d9541adfd8828f5845b5dac50624ee85 INFO:root:PassingDataObject: nmdc:2fa167e49f18a399b4714c4d0faef45f -INFO:root:PassingDataObject: nmdc:2736512ac9420d3b84d858f8a6498b14 +INFO:root:PassingDataObject: nmdc:d9541adfd8828f5845b5dac50624ee85 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, Assembly Activity for nmdc:mga02682 -INFO:root:PassingDataObject: nmdc:f1473374ec89d68b1ec2040b0f1ea69d -INFO:root:PassingDataObject: nmdc:12d3fc6a3b428e42b5f4a5dcfffe331e +INFO:root:PassingDataObject: nmdc:cc67b77cd5d0477b393cb14b7d951f2e INFO:root:PassingDataObject: nmdc:c6ca88412432aab946d39d1acc219493 INFO:root:PassingDataObject: nmdc:7460ccce72e5cca71c16eed12f2606f3 -INFO:root:PassingDataObject: nmdc:cc67b77cd5d0477b393cb14b7d951f2e +INFO:root:PassingDataObject: nmdc:f1473374ec89d68b1ec2040b0f1ea69d +INFO:root:PassingDataObject: nmdc:12d3fc6a3b428e42b5f4a5dcfffe331e INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, Annotation Activity for nmdc:mga02682 -INFO:root:PassingDataObject: nmdc:44104f05569791032a9a91f0a167ac23 -INFO:root:PassingDataObject: nmdc:bb98c7f29ecefc1f05e6f948fef4a19c -INFO:root:PassingDataObject: nmdc:8da707885fd00caab522778b320aa6f3 INFO:root:PassingDataObject: nmdc:8f3cf2d13e16ccbcb90e551c3de8c4d9 +INFO:root:PassingDataObject: nmdc:f4adbface8c83bf90dd0191f43cc9fee +INFO:root:PassingDataObject: nmdc:5c8a96c74787e14b52349714988cb8ce +INFO:root:PassingDataObject: nmdc:445507c159e63d2dbb9f276759936511 +INFO:root:PassingDataObject: nmdc:44104f05569791032a9a91f0a167ac23 +INFO:root:PassingDataObject: nmdc:06b8c19917c4a1d5aded26af493bc677 +INFO:root:PassingDataObject: nmdc:bd7b8b54a73319627007e699d2fc1406 INFO:root:PassingDataObject: nmdc:800152aa572d98a8606c1a9da85966ea -INFO:root:PassingDataObject: nmdc:14237b97b2a35419af87ec81493acade +INFO:root:PassingDataObject: nmdc:8da707885fd00caab522778b320aa6f3 +INFO:root:PassingDataObject: nmdc:11e47fb9491363a70398a6cec7c9b983 INFO:root:PassingDataObject: nmdc:13c98e6f131009e66fbd346d47d1858d +INFO:root:PassingDataObject: nmdc:bb98c7f29ecefc1f05e6f948fef4a19c +INFO:root:PassingDataObject: nmdc:234422053475f745397ec466ae08105a +INFO:root:PassingDataObject: nmdc:14237b97b2a35419af87ec81493acade +INFO:root:PassingDataObject: nmdc:10627b5da68cb8289a4d6c0122e5c28f INFO:root:PassingDataObject: nmdc:d2d6b8e08040f135d63cad7f88e1ab9b INFO:root:PassingDataObject: nmdc:e69ddab7600dd5a36c600c7bfeaa7b35 -INFO:root:PassingDataObject: nmdc:11e47fb9491363a70398a6cec7c9b983 -INFO:root:PassingDataObject: nmdc:120c84f8c0f042e4e1e7d08a56d8779b -INFO:root:PassingDataObject: nmdc:06b8c19917c4a1d5aded26af493bc677 INFO:root:PassingDataObject: nmdc:47c7b968452eccdb02b8807318fe7bb8 -INFO:root:PassingDataObject: nmdc:bd7b8b54a73319627007e699d2fc1406 -INFO:root:PassingDataObject: nmdc:5c8a96c74787e14b52349714988cb8ce -INFO:root:PassingDataObject: nmdc:445507c159e63d2dbb9f276759936511 -INFO:root:PassingDataObject: nmdc:234422053475f745397ec466ae08105a -INFO:root:PassingDataObject: nmdc:10627b5da68cb8289a4d6c0122e5c28f -INFO:root:PassingDataObject: nmdc:f4adbface8c83bf90dd0191f43cc9fee +INFO:root:PassingDataObject: nmdc:120c84f8c0f042e4e1e7d08a56d8779b INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213374 @@ -6962,56 +6962,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:e0e0b9582935ccb INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, Read QC Activity for nmdc:mga03974 -INFO:root:PassingDataObject: nmdc:0507c7f724fc6486434173e867e70b60 INFO:root:PassingDataObject: nmdc:01e059c5e6fdf9001080fce3590994fd +INFO:root:PassingDataObject: nmdc:0507c7f724fc6486434173e867e70b60 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, ReadBased Analysis Activity for nmdc:mga03974 -INFO:root:PassingDataObject: nmdc:8567bfd74a6af58671e4bf628b8d1f55 -INFO:root:PassingDataObject: nmdc:bdd0a982ee857564d4a5b2034350745f -INFO:root:PassingDataObject: nmdc:33fc7959840a415b298e740ba687ff1b INFO:root:PassingDataObject: nmdc:b9fb2a2248fc685d9bc638da2282f3ec INFO:root:PassingDataObject: nmdc:12a138a940e31fb8b2d795f5d96faffe -INFO:root:PassingDataObject: nmdc:83c139787bbf71432e75394b91245fbd INFO:root:PassingDataObject: nmdc:c49776b0c1e9a723028d64765d461dde -INFO:root:PassingDataObject: nmdc:897f78d77df302e2725502f48a8da32f +INFO:root:PassingDataObject: nmdc:83c139787bbf71432e75394b91245fbd INFO:root:PassingDataObject: nmdc:609193d1827fe0bf84b2619482b9516b +INFO:root:PassingDataObject: nmdc:33fc7959840a415b298e740ba687ff1b +INFO:root:PassingDataObject: nmdc:8567bfd74a6af58671e4bf628b8d1f55 +INFO:root:PassingDataObject: nmdc:897f78d77df302e2725502f48a8da32f +INFO:root:PassingDataObject: nmdc:bdd0a982ee857564d4a5b2034350745f INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, Assembly Activity for nmdc:mga03974 -INFO:root:PassingDataObject: nmdc:bb55be8fa6bd6fbfc25b18d8d3e5f6a2 INFO:root:PassingDataObject: nmdc:a868f3f8fabbcc34c3151e698428131e -INFO:root:PassingDataObject: nmdc:9d27e1e5a576e1b05566d9a0d104a4f5 +INFO:root:PassingDataObject: nmdc:bb55be8fa6bd6fbfc25b18d8d3e5f6a2 INFO:root:PassingDataObject: nmdc:4a7bfc78ce8d5949459cd1fc1d38a14f +INFO:root:PassingDataObject: nmdc:9d27e1e5a576e1b05566d9a0d104a4f5 INFO:root:PassingDataObject: nmdc:f088c7e9b432749259d69bd53adaa219 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, Annotation Activity for nmdc:mga03974 -INFO:root:PassingDataObject: nmdc:821cb81824d9c23b68158b551ae72b3e +INFO:root:PassingDataObject: nmdc:10a0b63f8d35f476f04085c2c15ec9e4 +INFO:root:PassingDataObject: nmdc:896e17c421d5cd7bb30f280cd6b4ff5a +INFO:root:PassingDataObject: nmdc:1f3b33d09467adde5c13336fd93dd6f5 INFO:root:PassingDataObject: nmdc:17f6ceed65203ea9821d3896e52cc15b INFO:root:PassingDataObject: nmdc:4f4c7fa43b5818bd52f557ec06cc18ac -INFO:root:PassingDataObject: nmdc:1f3b33d09467adde5c13336fd93dd6f5 -INFO:root:PassingDataObject: nmdc:4baceb22e48bfb5f52634daf3c51e51e -INFO:root:PassingDataObject: nmdc:fb4f9a87de062a917bdecbf42f7decda -INFO:root:PassingDataObject: nmdc:10a0b63f8d35f476f04085c2c15ec9e4 -INFO:root:PassingDataObject: nmdc:62831e238608a46aa0ca3e9d4407914a -INFO:root:PassingDataObject: nmdc:bf82e812ddf8e7568c0c0051ddbe470e -INFO:root:PassingDataObject: nmdc:9e03ba2bf4c0d8849c7965df926eb070 +INFO:root:PassingDataObject: nmdc:44ecb2b9e5907eb94650ab1f91a2784b INFO:root:PassingDataObject: nmdc:1493c5386aa59ec81810fe4bf3d366eb +INFO:root:PassingDataObject: nmdc:62831e238608a46aa0ca3e9d4407914a INFO:root:PassingDataObject: nmdc:57af532a1629116618a3d4fed3686bdf -INFO:root:PassingDataObject: nmdc:71ee46b186299cb5efb4f161c5aef79b -INFO:root:PassingDataObject: nmdc:44ecb2b9e5907eb94650ab1f91a2784b INFO:root:PassingDataObject: nmdc:7599796ef8a4c2207b1c74f2f70a47c9 -INFO:root:PassingDataObject: nmdc:896e17c421d5cd7bb30f280cd6b4ff5a +INFO:root:PassingDataObject: nmdc:fb4f9a87de062a917bdecbf42f7decda +INFO:root:PassingDataObject: nmdc:821cb81824d9c23b68158b551ae72b3e +INFO:root:PassingDataObject: nmdc:4baceb22e48bfb5f52634daf3c51e51e +INFO:root:PassingDataObject: nmdc:9e03ba2bf4c0d8849c7965df926eb070 +INFO:root:PassingDataObject: nmdc:bf82e812ddf8e7568c0c0051ddbe470e +INFO:root:PassingDataObject: nmdc:4e82bc9ac08a149f468de9fa0daecb0f INFO:root:PassingDataObject: nmdc:d36b8586ec9cab108a3c69e06ad88a4a INFO:root:PassingDataObject: nmdc:665540907b390617ac1faf74cf098376 -INFO:root:PassingDataObject: nmdc:4e82bc9ac08a149f468de9fa0daecb0f +INFO:root:PassingDataObject: nmdc:71ee46b186299cb5efb4f161c5aef79b INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213364 @@ -7037,53 +7037,53 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, Readbased Analysis Activity for nmdc:mga0vx38 -INFO:root:PassingDataObject: nmdc:f5739a086e797487fdaa68c071642442 -INFO:root:PassingDataObject: nmdc:c192f8b1fe0cd1348659af4d81ec1d48 -INFO:root:PassingDataObject: nmdc:bd8140150b0e48fe4362a5913e6b9da2 -INFO:root:PassingDataObject: nmdc:5e5e80996fc502919f163e2d31ecc4a4 -INFO:root:PassingDataObject: nmdc:6af7a12aa288d87b1e9076bb1f68e81e INFO:root:PassingDataObject: nmdc:36092d7c1c12826904bc9f9553eba0ae -INFO:root:PassingDataObject: nmdc:3453c837bad5cfc5b37ec0f6b40772c7 INFO:root:PassingDataObject: nmdc:a4ea037d55cc51cf0755a93b39065c8d +INFO:root:PassingDataObject: nmdc:3453c837bad5cfc5b37ec0f6b40772c7 +INFO:root:PassingDataObject: nmdc:bd8140150b0e48fe4362a5913e6b9da2 +INFO:root:PassingDataObject: nmdc:c192f8b1fe0cd1348659af4d81ec1d48 INFO:root:PassingDataObject: nmdc:b5e611fda82e08c4f002a38bc71066fc +INFO:root:PassingDataObject: nmdc:5e5e80996fc502919f163e2d31ecc4a4 +INFO:root:PassingDataObject: nmdc:6af7a12aa288d87b1e9076bb1f68e81e +INFO:root:PassingDataObject: nmdc:f5739a086e797487fdaa68c071642442 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, Assembly Activity for nmdc:mga0vx38 -INFO:root:PassingDataObject: nmdc:c3298d022868e8b0e7cfb783015b93ed INFO:root:PassingDataObject: nmdc:37573bca240f88091720ae61ae5c9452 +INFO:root:PassingDataObject: nmdc:da186671c5a581af0a7d195bd857c871 +INFO:root:PassingDataObject: nmdc:c3298d022868e8b0e7cfb783015b93ed INFO:root:PassingDataObject: nmdc:220c85a9e2d470157aed7a7556f85656 INFO:root:PassingDataObject: nmdc:3fc528f0105fc163876d68df26d35b29 -INFO:root:PassingDataObject: nmdc:da186671c5a581af0a7d195bd857c871 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, Annotation Activity for nmdc:mga0vx38 -INFO:root:PassingDataObject: nmdc:4d41794368ed796500bb6d2c82a6787a INFO:root:PassingDataObject: nmdc:551a7f35ff12bcd874c84b38c2adbceb -INFO:root:PassingDataObject: nmdc:ca06b1f1d9661a8bc574be6d9e88ea61 +INFO:root:PassingDataObject: nmdc:de7b26c212d063e5e0d2b47378252d4b +INFO:root:PassingDataObject: nmdc:7059a9060fa1c387109bd687f5185789 +INFO:root:PassingDataObject: nmdc:4d41794368ed796500bb6d2c82a6787a INFO:root:PassingDataObject: nmdc:62b6efaf7d8a21c60dd6604b04ab4c14 -INFO:root:PassingDataObject: nmdc:794ad11fd53f99ab3801227614b4ec3b -INFO:root:PassingDataObject: nmdc:6aa2609c12ebfd17d481772725a4ea10 INFO:root:PassingDataObject: nmdc:a8e41f5700ab72a4f61f3d1dd45285c8 -INFO:root:PassingDataObject: nmdc:de7b26c212d063e5e0d2b47378252d4b +INFO:root:PassingDataObject: nmdc:45743fa49c9e798771285daafa4282a8 INFO:root:PassingDataObject: nmdc:3c18be56eef0b4cdbc514764cb724f06 +INFO:root:PassingDataObject: nmdc:ca06b1f1d9661a8bc574be6d9e88ea61 +INFO:root:PassingDataObject: nmdc:6aa2609c12ebfd17d481772725a4ea10 +INFO:root:PassingDataObject: nmdc:794ad11fd53f99ab3801227614b4ec3b INFO:root:PassingDataObject: nmdc:7336ecf1f0b47e6161b52aec01d56ab8 -INFO:root:PassingDataObject: nmdc:45743fa49c9e798771285daafa4282a8 -INFO:root:PassingDataObject: nmdc:7059a9060fa1c387109bd687f5185789 INFO:root:passing_data_objects: 12 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, MAGs Analysis Activity for nmdc:mga0vx38 -INFO:root:PassingDataObject: nmdc:52309bf9398a5b0c401e1e23f5e414df -INFO:root:PassingDataObject: nmdc:38f5521b558377503f6e9a635998dd37 INFO:root:PassingDataObject: nmdc:77b1712067645b362aee53aad59000e2 INFO:root:PassingDataObject: nmdc:cf96331e23aa34224990105374272877 +INFO:root:PassingDataObject: nmdc:38f5521b558377503f6e9a635998dd37 +INFO:root:PassingDataObject: nmdc:4d12e1cab7ee7e72ea48151dfc0354c6 +INFO:root:PassingDataObject: nmdc:52309bf9398a5b0c401e1e23f5e414df ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fdefb3fa15098906cf788f5cadf17bb3 -ERROR:root:FailedDataObject: nmdc:4d12e1cab7ee7e72ea48151dfc0354c6, ERROR:root:failing_data_objects: 5 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fdefb3fa15098906cf788f5cadf17bb3, MAGs Analysis Activity for nmdc:mga0vx38 ERROR:root:FailedRecords: mags_activity_set, 1 @@ -7096,63 +7096,63 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:44cd635395e777c INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, Read QC Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:67cf17c1877adeb676aaa9acbb5ebd1d INFO:root:PassingDataObject: nmdc:453c4158334fce0c0e59016e4e490ee6 +INFO:root:PassingDataObject: nmdc:67cf17c1877adeb676aaa9acbb5ebd1d INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, ReadBased Analysis Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:27fc91488f58bb21ed6b66d2ca9cba4b +INFO:root:PassingDataObject: nmdc:3e903718c24ca349fe79cb1dccadcbf9 +INFO:root:PassingDataObject: nmdc:e62ccb864b04c2baca7414ef6492c477 INFO:root:PassingDataObject: nmdc:8ab8214f4c30e07cd531a1047382ccdf +INFO:root:PassingDataObject: nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 +INFO:root:PassingDataObject: nmdc:3b4e0bc10933d603310e2d6212bd8368 +INFO:root:PassingDataObject: nmdc:27fc91488f58bb21ed6b66d2ca9cba4b INFO:root:PassingDataObject: nmdc:338a51da00bcde29704b45d83ca72b77 -INFO:root:PassingDataObject: nmdc:e62ccb864b04c2baca7414ef6492c477 INFO:root:PassingDataObject: nmdc:39fc17e9230b7fe2277c4ed72dc2461f -INFO:root:PassingDataObject: nmdc:3b4e0bc10933d603310e2d6212bd8368 -INFO:root:PassingDataObject: nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 -INFO:root:PassingDataObject: nmdc:3e903718c24ca349fe79cb1dccadcbf9 INFO:root:PassingDataObject: nmdc:fd217c1029305d2cd04cbd0d6ac77771 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, Assembly Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:e5e994e4ff88dd575d1e36f0d4405482 -INFO:root:PassingDataObject: nmdc:c9d2d7339276f5fc81900d29993683bb INFO:root:PassingDataObject: nmdc:29fc76a89051f8736f4282f4db3e32d7 +INFO:root:PassingDataObject: nmdc:e5e994e4ff88dd575d1e36f0d4405482 INFO:root:PassingDataObject: nmdc:509f019239f76b362c8dd1173b5214c9 INFO:root:PassingDataObject: nmdc:83b0c3cc24d26bd4096faa73c75c3f8e +INFO:root:PassingDataObject: nmdc:c9d2d7339276f5fc81900d29993683bb INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, Annotation Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:055875f69824062a7ec30e5ab473a7fc -INFO:root:PassingDataObject: nmdc:21f9944bd641eb70fef619fc3260d51d -INFO:root:PassingDataObject: nmdc:5b80d37aef07d40b54eeed45adadc772 -INFO:root:PassingDataObject: nmdc:b0f3d05964047ce0f81ba66ed64ea4f1 -INFO:root:PassingDataObject: nmdc:3b8bed1b090a474890239dada083289e INFO:root:PassingDataObject: nmdc:87464195b06f111c8009116308a650a5 -INFO:root:PassingDataObject: nmdc:a64311c20426520fc942e3db57cdb73f -INFO:root:PassingDataObject: nmdc:38c59465d2b238d6f999e1278454622c -INFO:root:PassingDataObject: nmdc:3d37d679f478ebbe7cc050d6b3d2acc4 +INFO:root:PassingDataObject: nmdc:8ce28cfa92bf75b171659b3dbb1ca3cb INFO:root:PassingDataObject: nmdc:1d8852d8390a8dd985a6ff44369f5062 +INFO:root:PassingDataObject: nmdc:38c59465d2b238d6f999e1278454622c +INFO:root:PassingDataObject: nmdc:7455c629d77eb6ed24483fd3b4e11ed4 +INFO:root:PassingDataObject: nmdc:b0f3d05964047ce0f81ba66ed64ea4f1 +INFO:root:PassingDataObject: nmdc:5b80d37aef07d40b54eeed45adadc772 +INFO:root:PassingDataObject: nmdc:83614a591ea8b644126c756c7fa0368f +INFO:root:PassingDataObject: nmdc:e884c8cabf071bceb75dec821064e5ab INFO:root:PassingDataObject: nmdc:e5cdd8cd681ccc95d213b4f48f7c6099 +INFO:root:PassingDataObject: nmdc:59347f89b33779eb9d75480ba8f433bd +INFO:root:PassingDataObject: nmdc:3d37d679f478ebbe7cc050d6b3d2acc4 INFO:root:PassingDataObject: nmdc:57af946dfc2c16d1c15643722ed54389 -INFO:root:PassingDataObject: nmdc:83614a591ea8b644126c756c7fa0368f -INFO:root:PassingDataObject: nmdc:7455c629d77eb6ed24483fd3b4e11ed4 +INFO:root:PassingDataObject: nmdc:3b8bed1b090a474890239dada083289e INFO:root:PassingDataObject: nmdc:ec8039784e10e81d952894d381eaab06 -INFO:root:PassingDataObject: nmdc:e884c8cabf071bceb75dec821064e5ab +INFO:root:PassingDataObject: nmdc:055875f69824062a7ec30e5ab473a7fc +INFO:root:PassingDataObject: nmdc:a64311c20426520fc942e3db57cdb73f INFO:root:PassingDataObject: nmdc:6d564782afdf7bc5a73c22bd069232fd -INFO:root:PassingDataObject: nmdc:59347f89b33779eb9d75480ba8f433bd -INFO:root:PassingDataObject: nmdc:8ce28cfa92bf75b171659b3dbb1ca3cb +INFO:root:PassingDataObject: nmdc:21f9944bd641eb70fef619fc3260d51d INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, MAGs Analysis Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:8d07136f2421560db99f4a72ffa05a88 INFO:root:PassingDataObject: nmdc:eac3cce3b42a88f6c15db9d51300b654 +INFO:root:PassingDataObject: nmdc:8d07136f2421560db99f4a72ffa05a88 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213366 @@ -7164,56 +7164,56 @@ INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:995c8b403d4ae43 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, Read QC Activity for nmdc:mga0ap42 -INFO:root:PassingDataObject: nmdc:3a37b36f633811e92deca2b8825a5c21 INFO:root:PassingDataObject: nmdc:d98a508ec377e189bf67fcc3431e8b88 +INFO:root:PassingDataObject: nmdc:3a37b36f633811e92deca2b8825a5c21 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, ReadBased Analysis Activity for nmdc:mga0ap42 +INFO:root:PassingDataObject: nmdc:f3f5c2553674a92ac266ba10f691fe5e INFO:root:PassingDataObject: nmdc:3fb3515d3cd4bc9c971745ad9e5a4408 +INFO:root:PassingDataObject: nmdc:dc700ccae8797c8c7ce770b2210bd290 INFO:root:PassingDataObject: nmdc:428b3ab09a9031d1fbd466c45aaaeca6 -INFO:root:PassingDataObject: nmdc:8787e5f46555ffac92b9a21be6d3a463 -INFO:root:PassingDataObject: nmdc:ea19d630f32fa0891964ab3bde5f893e INFO:root:PassingDataObject: nmdc:e37082ea33aa54468afde0c0e6cb59f2 -INFO:root:PassingDataObject: nmdc:36bd9a52ed3e442caebd9f28f415a941 -INFO:root:PassingDataObject: nmdc:dc700ccae8797c8c7ce770b2210bd290 INFO:root:PassingDataObject: nmdc:0f5b9a1d0957b879d0c82e9f2a11914f -INFO:root:PassingDataObject: nmdc:f3f5c2553674a92ac266ba10f691fe5e +INFO:root:PassingDataObject: nmdc:ea19d630f32fa0891964ab3bde5f893e +INFO:root:PassingDataObject: nmdc:8787e5f46555ffac92b9a21be6d3a463 +INFO:root:PassingDataObject: nmdc:36bd9a52ed3e442caebd9f28f415a941 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, Assembly Activity for nmdc:mga0ap42 INFO:root:PassingDataObject: nmdc:dc257584ae17f52d32a01e9a1d50c0fd -INFO:root:PassingDataObject: nmdc:9345663cca27d20f5657dad69d175d37 -INFO:root:PassingDataObject: nmdc:26026229fd13197a44f11b85645edd43 INFO:root:PassingDataObject: nmdc:96435c6e9802f9ad5987d851d22abaa0 INFO:root:PassingDataObject: nmdc:03fc202448c65de6e565ac5692b8dc99 +INFO:root:PassingDataObject: nmdc:26026229fd13197a44f11b85645edd43 +INFO:root:PassingDataObject: nmdc:9345663cca27d20f5657dad69d175d37 INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, Annotation Activity for nmdc:mga0ap42 -INFO:root:PassingDataObject: nmdc:98fd8c5d6f4d922fe4c9140049f56ef6 -INFO:root:PassingDataObject: nmdc:44c8cbcf4a48eef705d2bdee67371784 -INFO:root:PassingDataObject: nmdc:d45fc0f7e8272fabaa68cf6bd2d83c55 -INFO:root:PassingDataObject: nmdc:10a866d809881e682b8920bec30837b6 -INFO:root:PassingDataObject: nmdc:469ebbfd091f01480286eeaa0bbb1c13 INFO:root:PassingDataObject: nmdc:5c6a5a400c937e15953de2580846cb22 +INFO:root:PassingDataObject: nmdc:98fd8c5d6f4d922fe4c9140049f56ef6 +INFO:root:PassingDataObject: nmdc:5798ceed4f115a355a5a6ddad082f010 +INFO:root:PassingDataObject: nmdc:e261092309b050fad929ee61da3295be +INFO:root:PassingDataObject: nmdc:7015c089aa313f5ba841378235f569ce +INFO:root:PassingDataObject: nmdc:f4e7c59ca6633994096fbc7464ea6632 +INFO:root:PassingDataObject: nmdc:eeab4d6cc82a75218795a2d992612204 INFO:root:PassingDataObject: nmdc:010f4858bcefce46fc26889434d7d335 -INFO:root:PassingDataObject: nmdc:8dacb55ac57abfcde6325f2ce80c8499 -INFO:root:PassingDataObject: nmdc:bf6a229cf031291ce6285012ba41b376 +INFO:root:PassingDataObject: nmdc:469ebbfd091f01480286eeaa0bbb1c13 INFO:root:PassingDataObject: nmdc:5a9f8954931e5972ae56a5476d7338c4 -INFO:root:PassingDataObject: nmdc:eeab4d6cc82a75218795a2d992612204 -INFO:root:PassingDataObject: nmdc:e3459b7b9478a2e0df4e7f605abd1ed0 -INFO:root:PassingDataObject: nmdc:5798ceed4f115a355a5a6ddad082f010 +INFO:root:PassingDataObject: nmdc:bf6a229cf031291ce6285012ba41b376 INFO:root:PassingDataObject: nmdc:d57800764027e6763e46c50bcfc137c1 -INFO:root:PassingDataObject: nmdc:f4e7c59ca6633994096fbc7464ea6632 -INFO:root:PassingDataObject: nmdc:7015c089aa313f5ba841378235f569ce +INFO:root:PassingDataObject: nmdc:d45fc0f7e8272fabaa68cf6bd2d83c55 +INFO:root:PassingDataObject: nmdc:10a866d809881e682b8920bec30837b6 +INFO:root:PassingDataObject: nmdc:8dacb55ac57abfcde6325f2ce80c8499 INFO:root:PassingDataObject: nmdc:6856624f6c1fdd1e6c9f2864745514ba -INFO:root:PassingDataObject: nmdc:e261092309b050fad929ee61da3295be INFO:root:PassingDataObject: nmdc:3910f577000a01c85414cee1e4a2da8a +INFO:root:PassingDataObject: nmdc:e3459b7b9478a2e0df4e7f605abd1ed0 +INFO:root:PassingDataObject: nmdc:44c8cbcf4a48eef705d2bdee67371784 INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213372 @@ -7343,49 +7343,49 @@ INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208380 INFO:root:found 1 records INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, ReadBased Analysis Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:59a25ae32482a78fc21a817b4c551da7 +INFO:root:PassingDataObject: nmdc:c2ff0fa755825ef34d1e16a446a5ae6b +INFO:root:PassingDataObject: nmdc:cbb6016f57f643796497809739dc31c6 INFO:root:PassingDataObject: nmdc:fd615655a16d0631c00edfb1b4794b8a +INFO:root:PassingDataObject: nmdc:59a25ae32482a78fc21a817b4c551da7 INFO:root:PassingDataObject: nmdc:b61b15ddd0a879bede3b73471849a3a4 -INFO:root:PassingDataObject: nmdc:c2ff0fa755825ef34d1e16a446a5ae6b INFO:root:PassingDataObject: nmdc:dbc5139e3c05806778ab3450dbcb63ba -INFO:root:PassingDataObject: nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 INFO:root:PassingDataObject: nmdc:6548fd3eb77efb01cdabcfeb8817057f -INFO:root:PassingDataObject: nmdc:cbb6016f57f643796497809739dc31c6 +INFO:root:PassingDataObject: nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 INFO:root:PassingDataObject: nmdc:e5818a24d6afb5332a741be700acc060 INFO:root:passing_data_objects: 9 INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208380 INFO:root:found 1 records INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, Assembly Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:02ee0361c81b2a216d2688d14bbd444c -INFO:root:PassingDataObject: nmdc:8977a29ea63d280856e001d59a74786f -INFO:root:PassingDataObject: nmdc:56ec99c49845a93cfdab5386b4fbae00 INFO:root:PassingDataObject: nmdc:08c46e594044bd99912767da0ab6c912 INFO:root:PassingDataObject: nmdc:5e0c8d776a3f21d577c5ab013ecbf07c +INFO:root:PassingDataObject: nmdc:8977a29ea63d280856e001d59a74786f +INFO:root:PassingDataObject: nmdc:56ec99c49845a93cfdab5386b4fbae00 +INFO:root:PassingDataObject: nmdc:02ee0361c81b2a216d2688d14bbd444c INFO:root:passing_data_objects: 5 INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208380 INFO:root:found 1 records INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, Annotation Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:2dcbd68530370e00685f8b30b20b08fb -INFO:root:PassingDataObject: nmdc:4542683c6d730da02efd5bae4107babf INFO:root:PassingDataObject: nmdc:df59e6e6703872168b18347cf11d6cae +INFO:root:PassingDataObject: nmdc:34a1e7f3bb0aab9173dc737edbe91e7d +INFO:root:PassingDataObject: nmdc:c2697b7c25dde3471a3056f61fd14f51 +INFO:root:PassingDataObject: nmdc:410cb5de7e63a5e0d5c8f9b672053252 INFO:root:PassingDataObject: nmdc:40364d2c546ec1d6c515017616750d71 -INFO:root:PassingDataObject: nmdc:a7629d4fdd08a63238d65de64cc79210 -INFO:root:PassingDataObject: nmdc:381a1a6e5fbd59a2386400c0c664dd20 -INFO:root:PassingDataObject: nmdc:f193b3aa402724d4f3ad6b3636e1a89c -INFO:root:PassingDataObject: nmdc:b2eb8cdc081303695b833c7a85524399 INFO:root:PassingDataObject: nmdc:50ad99e5f5fb8de826ba4381caa0580a -INFO:root:PassingDataObject: nmdc:c881711b86265f78ec78b8e3310bd0b1 -INFO:root:PassingDataObject: nmdc:df76b1232bb3c791dd771f9824495a40 -INFO:root:PassingDataObject: nmdc:c1befb717d59ac6b571abad914104a6d INFO:root:PassingDataObject: nmdc:6e0a5497d5d363786de3d83e57550114 -INFO:root:PassingDataObject: nmdc:dbdeeaad2fbb9650224c9169ab7e94b1 +INFO:root:PassingDataObject: nmdc:c881711b86265f78ec78b8e3310bd0b1 +INFO:root:PassingDataObject: nmdc:b2eb8cdc081303695b833c7a85524399 INFO:root:PassingDataObject: nmdc:be82ecb0abfd22ff863c2d68ab36e2f4 INFO:root:PassingDataObject: nmdc:48b2dec211a9824c41491abbe2a3a970 -INFO:root:PassingDataObject: nmdc:c2697b7c25dde3471a3056f61fd14f51 -INFO:root:PassingDataObject: nmdc:34a1e7f3bb0aab9173dc737edbe91e7d -INFO:root:PassingDataObject: nmdc:410cb5de7e63a5e0d5c8f9b672053252 +INFO:root:PassingDataObject: nmdc:f193b3aa402724d4f3ad6b3636e1a89c +INFO:root:PassingDataObject: nmdc:c1befb717d59ac6b571abad914104a6d +INFO:root:PassingDataObject: nmdc:a7629d4fdd08a63238d65de64cc79210 +INFO:root:PassingDataObject: nmdc:381a1a6e5fbd59a2386400c0c664dd20 +INFO:root:PassingDataObject: nmdc:2dcbd68530370e00685f8b30b20b08fb +INFO:root:PassingDataObject: nmdc:dbdeeaad2fbb9650224c9169ab7e94b1 +INFO:root:PassingDataObject: nmdc:df76b1232bb3c791dd771f9824495a40 +INFO:root:PassingDataObject: nmdc:4542683c6d730da02efd5bae4107babf INFO:root:passing_data_objects: 19 INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208380 @@ -7395,8 +7395,8 @@ INFO:root:PassingDataObject: nmdc:328375b6a823fa19b1d96762c383fc8a INFO:root:PassingDataObject: nmdc:bc11ad49f3db9e069ed6d3395852182e INFO:root:passing_data_objects: 2 INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, MAGs Analysis Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:31be7b9b32e0dffbc4caf64599fbe701 INFO:root:PassingDataObject: nmdc:76f8131bebe2a014b5accac2cef83c14 +INFO:root:PassingDataObject: nmdc:31be7b9b32e0dffbc4caf64599fbe701 INFO:root:passing_data_objects: 2 INFO:root:PassingRecords: mags_activity_set, 2 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208380 @@ -7463,28 +7463,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208343 INFO:root:found 1 records INFO:root:record: nmdc:839560f9650622f232c262d8cf7a9db9, Annotation Activity for nmdc_mta0mz25 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Annotation Activity for nmdc_mta0mz25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b291a7a8f73c5a0782bf77316e52b642,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5b329935ba422d075f7513bcc792f503,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a734263be826057a5345d6f42347a36,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be9bd19e034bd5c54d5afd3b4e71c6ec,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f3d7293037e5032a924ad214560e8bce,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f29d6ef02d04f7db21dc81ea21941cd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e5896c116be736de57354b4ca9182a88,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60b947e577aecffdaa8c88273047ebf1,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e7f1740a77a422e5b11caa722a8b05b8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d8eae217c6284ec6f57524dc5d72302f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:19fd8fdd362abed773947131e5ba4063,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:75d972cc97a6b190e2b502e0c86819ed,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:675620f554ce6d4365da4e0d803a7926,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e5896c116be736de57354b4ca9182a88,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5e7960f48d0eb30fa26ccaf54fa5d061,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f3d7293037e5032a924ad214560e8bce,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db4d48b9af6477815910c9ac3e625031,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:783ad3db93bf7a771e6e6cf4d4c9aae7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d01e22457d62369a8620db05c8de2fde,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5b329935ba422d075f7513bcc792f503,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1ce872de9133258b8599643c4437c84d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d8eae217c6284ec6f57524dc5d72302f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60b947e577aecffdaa8c88273047ebf1,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:779f21c6a8cf90d2a7c9a5e9d1de6285,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d01e22457d62369a8620db05c8de2fde,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:675620f554ce6d4365da4e0d803a7926,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:75d972cc97a6b190e2b502e0c86819ed,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0ced42cf7239ea433818a126436722cd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:19fd8fdd362abed773947131e5ba4063,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:031173fefe4457e18d92bb56b9c8aada,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a734263be826057a5345d6f42347a36,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db4d48b9af6477815910c9ac3e625031,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b291a7a8f73c5a0782bf77316e52b642,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be9bd19e034bd5c54d5afd3b4e71c6ec,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0ced42cf7239ea433818a126436722cd,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:045244c6eb37b071a3c6cf7cf3bcf9fc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1ce872de9133258b8599643c4437c84d,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Annotation Activity for nmdc_mta0mz25 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7494,8 +7494,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208343 INFO:root:found 1 records INFO:root:record: nmdc:839560f9650622f232c262d8cf7a9db9, Metatranscriptome Activity for nmdc_mta0mz25 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Metatranscriptome Activity for nmdc_mta0mz25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:aea2bd22b9f7df9dedbf9e5927828a2b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cc3818746b67f3a5aa33859662bb1790,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:aea2bd22b9f7df9dedbf9e5927828a2b,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Metatranscriptome Activity for nmdc_mta0mz25 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -7527,28 +7527,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208346 INFO:root:found 1 records INFO:root:record: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Annotation Activity for nmdc_mta0bp43 ERROR:root:OmicsMissingHasOutput: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Annotation Activity for nmdc_mta0bp43 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c5ab98d6f4fd49333bfe69be6eb393ab,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:779ec49a86ea6a0e198b7bf2ca44bdf2,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3add832c244ac707500f3c07c7d16a10,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:23ca2b9589d5c0d5e6b18a85ed9f7519,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:278df0c78b628ee95b87f7c553ade1b4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fe7f883ffaba5bfbb2b6f838ca67808b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fd54915b7800c8a8bb4884bc77fbccd2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5146cbb42881769bc81f0eb8818ba603,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:746fe52f2a82a9b867791a2d98cc5eab,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da93f96d36788806d18a4cc10c96bf03,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:779ec49a86ea6a0e198b7bf2ca44bdf2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f086b8ad6d1a14c221a6120bc49de62,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:23ca2b9589d5c0d5e6b18a85ed9f7519,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:739f3c150c722c173fdafcf0215c11d2,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0bdebf77ff6c3a127c2956999af4374e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3e80fa87a622f7594b091d428c3e1960,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:af13bd0add2530dfa822a269fe602ae8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5dcdbf256b4a775bb42cab94e7838e0d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e12e8ba76223486394b294549ae281e3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da93f96d36788806d18a4cc10c96bf03,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:278df0c78b628ee95b87f7c553ade1b4,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0d92710a4549a56ed84f5d58283eb8c0,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5327480c05caa3c6e14233161aa884a5,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a2791406bbb5b6d2363f1bce58f722e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fe7f883ffaba5bfbb2b6f838ca67808b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5146cbb42881769bc81f0eb8818ba603,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:91af710e3af010d6659a24f8d59bf396,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5327480c05caa3c6e14233161aa884a5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:739f3c150c722c173fdafcf0215c11d2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3e80fa87a622f7594b091d428c3e1960,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5dcdbf256b4a775bb42cab94e7838e0d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f086b8ad6d1a14c221a6120bc49de62,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:714470a9199df55a561b60c1411a1662,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:af13bd0add2530dfa822a269fe602ae8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c5ab98d6f4fd49333bfe69be6eb393ab,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e12e8ba76223486394b294549ae281e3,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Annotation Activity for nmdc_mta0bp43 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7591,28 +7591,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208353 INFO:root:found 1 records INFO:root:record: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Annotation Activity for nmdc_mta0y710 ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Annotation Activity for nmdc_mta0y710 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4ee8b76971c15b7e07a705b82690aa04,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:28c7df45602b74f72a45f01f960fd2a4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c39fea9d7933e873fcb13a6de9e0cde8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:282b4dd34fee96e8ae74bb3d7499d5d2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:13ec6f6ece8b9320c4e1850cc743840a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45112eb4a07b17c0d88849438b3837fb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:34a187c72552d9fc1660874561f61d8f,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fcc62bedab15fe204e7627a18ad34be3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7996d384eabe8f8f41f5ffe3215391e0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eaff2a1b501daf396137f5ee802672b5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:28c7df45602b74f72a45f01f960fd2a4,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7a2e108c95e7794f7a8d10ed9b7b5956,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e036fd267df6855191e94d40f4ee0522,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4ee8b76971c15b7e07a705b82690aa04,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:162c59683c9edd99db6516802c5f2d79,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f547f8748b40ec00340ca3b13aa934e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eaff2a1b501daf396137f5ee802672b5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45112eb4a07b17c0d88849438b3837fb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a95dcad02d7c1eead345ce693d9fbbbd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c39fea9d7933e873fcb13a6de9e0cde8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7c15b3f5c727b77ce83dc87892dc38b5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:738cead92f0e2d9e74c69c87bceb5b8e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3c3fe812447660bc12465c2df5345925,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7b3cad772656e6b1aa3947ba357f6403,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:13ec6f6ece8b9320c4e1850cc743840a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7996d384eabe8f8f41f5ffe3215391e0,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e3745d790f48b24f09f3141930e2c761,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:34a187c72552d9fc1660874561f61d8f,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45bae9cf879af44241073d4b50e20e03,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7a2e108c95e7794f7a8d10ed9b7b5956,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f72c6b02b455d45c07b0de2c2fd48b77,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3c3fe812447660bc12465c2df5345925,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:162c59683c9edd99db6516802c5f2d79,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7b3cad772656e6b1aa3947ba357f6403,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:738cead92f0e2d9e74c69c87bceb5b8e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f547f8748b40ec00340ca3b13aa934e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7c15b3f5c727b77ce83dc87892dc38b5,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Annotation Activity for nmdc_mta0y710 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7622,8 +7622,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208353 INFO:root:found 1 records INFO:root:record: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Metatranscriptome Activity for nmdc_mta0y710 ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Metatranscriptome Activity for nmdc_mta0y710 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:42899bcc3f8aec248fac26cc477c3e37,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e3a54c6bd700af7d9189be074715cd61,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:42899bcc3f8aec248fac26cc477c3e37,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Metatranscriptome Activity for nmdc_mta0y710 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -7636,8 +7636,8 @@ INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208352 INFO:root:found 1 records INFO:root:record: nmdc:628598d00d3931793d9be69a47672642, Read QC Activity for nmdc_mta04n39 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Read QC Activity for nmdc_mta04n39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eacaebfb5cdb318f3d0d5b576f437bd3,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5d0e5c5938464e83276f50ccf2486b64,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eacaebfb5cdb318f3d0d5b576f437bd3,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Read QC Activity for nmdc_mta04n39 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7655,28 +7655,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208352 INFO:root:found 1 records INFO:root:record: nmdc:628598d00d3931793d9be69a47672642, Annotation Activity for nmdc_mta04n39 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Annotation Activity for nmdc_mta04n39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9ac0a1ef9d0a0f6d39d8e5c55d4a8b5f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5bdcb3fa405de016d9ce7881ceb3b063,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:014c849aa9defca1798f5269078784b3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f385a78a04ff119dc31a2c663940ddb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d3ec1f6ca834dc6ee239b6ffd86dfe34,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79d21fd07e51266d8813a0689f8d81f3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ee7d233af5fac9e78dd5aba6eeb5a767,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b40059796731adb54202c0604a51e5bb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a7cd72c9e460c618ee70881306041598,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d6367cc960b6b614ba6501bb3f0ac6b9,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9abdceb6e6022724fc9f8cff0276fd01,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f015add835a35c07ae9ede731c8477f3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:014c849aa9defca1798f5269078784b3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72fd1df03ec6105b01cdb937330b1e6f,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a3fdf59899653e519c125afc1bed4041,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c8267083ddf1d65223daa5c1b5809bae,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b40059796731adb54202c0604a51e5bb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be65539cf891831943072dc9490b4bcc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79aebdf95dae9b7bce7f9b915383da46,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f385a78a04ff119dc31a2c663940ddb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a28a67edc2526a0e449e20b3177c9bec,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a7cd72c9e460c618ee70881306041598,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:240731e8e49b2710a5c07facf5fc4282,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9689680f886b586cc8686edffad6d0c1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ee7d233af5fac9e78dd5aba6eeb5a767,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79d21fd07e51266d8813a0689f8d81f3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c8267083ddf1d65223daa5c1b5809bae,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9abdceb6e6022724fc9f8cff0276fd01,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d3ec1f6ca834dc6ee239b6ffd86dfe34,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d10ebb87aa28b13a062d436ef400df0a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72fd1df03ec6105b01cdb937330b1e6f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5bdcb3fa405de016d9ce7881ceb3b063,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:15eb92c9879e566744a3d0f6054bc96a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79aebdf95dae9b7bce7f9b915383da46,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9ac0a1ef9d0a0f6d39d8e5c55d4a8b5f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:240731e8e49b2710a5c07facf5fc4282,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9689680f886b586cc8686edffad6d0c1,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Annotation Activity for nmdc_mta04n39 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7686,8 +7686,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208352 INFO:root:found 1 records INFO:root:record: nmdc:628598d00d3931793d9be69a47672642, Metatranscriptome Activity for nmdc_mta04n39 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Metatranscriptome Activity for nmdc_mta04n39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4eed4f388b380739686e118731d052a7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5680ff887d7dc52ed7c9900b753cbae5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4eed4f388b380739686e118731d052a7,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Metatranscriptome Activity for nmdc_mta04n39 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -7700,8 +7700,8 @@ INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208354 INFO:root:found 1 records INFO:root:record: nmdc:897c054089e2c5b6d0584e4871428917, Read QC Activity for nmdc_mta0tj70 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Read QC Activity for nmdc_mta0tj70 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3b16638cecb2b63e4c53cddf051461bb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:325d8d66913cb26f7d16d2bb327101cf,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3b16638cecb2b63e4c53cddf051461bb,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Read QC Activity for nmdc_mta0tj70 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7719,28 +7719,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208354 INFO:root:found 1 records INFO:root:record: nmdc:897c054089e2c5b6d0584e4871428917, Annotation Activity for nmdc_mta0tj70 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Annotation Activity for nmdc_mta0tj70 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1caab04eb7e04ebe1fa11a85e4cc2064,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:96aab534d0f8f851aa26ec37ea6d973b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:000c79acd89371bfa5dfc20998ab933c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2f410fe030eaa169d19b70675f237e51,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ee4bdb9f07e1732f1cfc0398105c208e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:536bf28b3303a1bca0309c400dc4524e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f844a3e66da21a96510e505e805c10b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc708ddf88c5f22728c30e37fcda88e9,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c984a79194cebb70c6a42662cc209ed4,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2665e7fe1d5680c5f6d24425cc5f3d37,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ee4bdb9f07e1732f1cfc0398105c208e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e9e526d4e3a0c4b39b24ee0b0457b2fd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c67794c25404daeed98da778c7131e03,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1caab04eb7e04ebe1fa11a85e4cc2064,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9e79e7a5f2f8a96fdf30b44795d41196,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f64e3eee3890599522e6ef6df61c7bc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9743953751105eb74b79d25612260ca4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6e1ecb3c985ddaa31a8aa9210f987933,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dce25a09e4b8924896719ab2ca860085,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:68126e4e9dd64cf4f48375fdc644ea93,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0cd223fc9d6811e4491bf145a4b554ae,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f64e3eee3890599522e6ef6df61c7bc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da38b23c21ad19a9cc1b6fed358c81e1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:96aab534d0f8f851aa26ec37ea6d973b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f88ffae668fbd26808fb29bd4af4238d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6e1ecb3c985ddaa31a8aa9210f987933,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9743953751105eb74b79d25612260ca4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c67794c25404daeed98da778c7131e03,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:000c79acd89371bfa5dfc20998ab933c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:baae0f90f4fb9b6514c6c744768d23c0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da38b23c21ad19a9cc1b6fed358c81e1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0cd223fc9d6811e4491bf145a4b554ae,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2665e7fe1d5680c5f6d24425cc5f3d37,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc708ddf88c5f22728c30e37fcda88e9,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2f410fe030eaa169d19b70675f237e51,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c984a79194cebb70c6a42662cc209ed4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:68126e4e9dd64cf4f48375fdc644ea93,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:536bf28b3303a1bca0309c400dc4524e,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Annotation Activity for nmdc_mta0tj70 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7750,8 +7750,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208354 INFO:root:found 1 records INFO:root:record: nmdc:897c054089e2c5b6d0584e4871428917, Metatranscriptome Activity for nmdc_mta0tj70 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Metatranscriptome Activity for nmdc_mta0tj70 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:581fac1731ea9bd5514d32c168a6139c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f078510283a7e494839cdf2abf5a50e2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:581fac1731ea9bd5514d32c168a6139c,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Metatranscriptome Activity for nmdc_mta0tj70 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -7764,8 +7764,8 @@ INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208356 INFO:root:found 1 records INFO:root:record: nmdc:17b505f7781a3f0e932e8f39f4190068, Read QC Activity for nmdc_mta0jh65 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Read QC Activity for nmdc_mta0jh65 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6ad9b92d193abd7d144d55246fa479b0,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e109e3b8a6666a2fd1b3efb744400574,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6ad9b92d193abd7d144d55246fa479b0,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Read QC Activity for nmdc_mta0jh65 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7783,28 +7783,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208356 INFO:root:found 1 records INFO:root:record: nmdc:17b505f7781a3f0e932e8f39f4190068, Annotation Activity for nmdc_mta0jh65 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Annotation Activity for nmdc_mta0jh65 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47986f889ba8b262bd66735849566169,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1c118f662cd226472a254ec237c9d5cd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bf79c0dd90eedfbdadd9fb7a9dd861e2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c9051d5b066f7bcb779d4376bca55aae,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2704d48673ab376c5f134322a35eb9e8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60d486789ad2bc5ef15c6cb7a14013d2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:95a1acbec231282992ee26a5d834e9fb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c888ca7cf01a4e84a007903ac76291ed,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a8d6aa47c9c260bbac6e3ae948acd152,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9517e0185d22e097dde35b60b66968e7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:02cbd7c8e4fd5c2b7c0367570524f0cb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:53197c9d8308cb8e0710160ba06595a7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:85e8f8c5a3dedd7f5490358f29bcc5ef,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a84073ecf7ff5762598813f1183292c7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1c118f662cd226472a254ec237c9d5cd,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9910783d0dd246264c1d79ea5062581e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:981ab3235c1275963332f9fda6f05f35,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f2123d64ae9714b82d25463ff06a81d,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8998233dc979f5dfb7de4b5443fda09a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:95a1acbec231282992ee26a5d834e9fb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:baa368a4524eac2f52e707dc8ba1bae7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ec40248b6c5214211972a31d32d76dbc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9517e0185d22e097dde35b60b66968e7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:981ab3235c1275963332f9fda6f05f35,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a5e8321509805aa43a612f50ad0fca43,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a8d6aa47c9c260bbac6e3ae948acd152,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c9051d5b066f7bcb779d4376bca55aae,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47986f889ba8b262bd66735849566169,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a84073ecf7ff5762598813f1183292c7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7a42a01dbff36d53f588942dc685e745,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c888ca7cf01a4e84a007903ac76291ed,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bf79c0dd90eedfbdadd9fb7a9dd861e2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ec40248b6c5214211972a31d32d76dbc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60d486789ad2bc5ef15c6cb7a14013d2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:baa368a4524eac2f52e707dc8ba1bae7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:85e8f8c5a3dedd7f5490358f29bcc5ef,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Annotation Activity for nmdc_mta0jh65 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7814,8 +7814,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208356 INFO:root:found 1 records INFO:root:record: nmdc:17b505f7781a3f0e932e8f39f4190068, Metatranscriptome Activity for nmdc_mta0jh65 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Metatranscriptome Activity for nmdc_mta0jh65 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5105d727c876576da54e4acb0a7715cc,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3e60d7f6f311146cfe63ac04c9984945,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5105d727c876576da54e4acb0a7715cc,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Metatranscriptome Activity for nmdc_mta0jh65 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -7847,28 +7847,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208351 INFO:root:found 1 records INFO:root:record: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Annotation Activity for nmdc_mta0tg76 ERROR:root:OmicsMissingHasOutput: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Annotation Activity for nmdc_mta0tg76 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f5736b817b43014f5544f9531e53424,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7b5a300e6054743c58b22082caa1832e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:89d4a23e80923af58c4d5db7cf37da77,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1120d8feb888587f8b69ba57c9b0443e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f4fed77a7455a09176453d174074cd55,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f979b86f10bc9eb5f073c0e72a8841f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5df6844935430d22f3d900decfe525e9,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9ef96780d2d7dbeee2e003e42c4d031e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:10dd88b31b55c17648c56f255a476fb5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d985123a58e6659ffd6500cea7e240a8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4edd4cf498fcaf7de58f33f21df77ff0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8c4cb9a4d0c7d5a085add7f8a84f5672,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:39005f30e08c4dda38573de0fc87e910,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:af985bd51815d58c7fad1ac30fa5e16a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92955f82270fb4e70d1d732c642f2963,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a8554353a8d57e53dfa753d2fa6bf0c3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a4c8033e704d42999df48b5395ea401,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bc760b0e7ee49e926eb640967bdacb85,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4edd4cf498fcaf7de58f33f21df77ff0,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:10dd88b31b55c17648c56f255a476fb5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5df6844935430d22f3d900decfe525e9,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f21aabf8df4954013bc574b2e269bcc8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a8554353a8d57e53dfa753d2fa6bf0c3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8c4cb9a4d0c7d5a085add7f8a84f5672,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2cdb9f6bd75fe3ab3949109b53d67d70,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2384185a82ec0a0e1395562eeb3b3f0b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0e76af51c0f224f2f5e81542adf298dd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1120d8feb888587f8b69ba57c9b0443e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7b5a300e6054743c58b22082caa1832e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:89d4a23e80923af58c4d5db7cf37da77,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f979b86f10bc9eb5f073c0e72a8841f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bc760b0e7ee49e926eb640967bdacb85,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:39005f30e08c4dda38573de0fc87e910,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9ef96780d2d7dbeee2e003e42c4d031e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2384185a82ec0a0e1395562eeb3b3f0b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a4c8033e704d42999df48b5395ea401,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f5736b817b43014f5544f9531e53424,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92955f82270fb4e70d1d732c642f2963,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d985123a58e6659ffd6500cea7e240a8,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Annotation Activity for nmdc_mta0tg76 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7878,8 +7878,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208351 INFO:root:found 1 records INFO:root:record: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Metatranscriptome Activity for nmdc_mta0tg76 ERROR:root:OmicsMissingHasOutput: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Metatranscriptome Activity for nmdc_mta0tg76 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47017a8289f49deb37bb1de95c94ef67,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60dae7a05dd6256ca6c3f41ec060b0fb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47017a8289f49deb37bb1de95c94ef67,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Metatranscriptome Activity for nmdc_mta0tg76 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -7911,28 +7911,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208358 INFO:root:found 1 records INFO:root:record: nmdc:84b1d252ae043684f6ea4d1444bffd64, Annotation Activity for nmdc_mta07p39 ERROR:root:OmicsMissingHasOutput: nmdc:84b1d252ae043684f6ea4d1444bffd64, Annotation Activity for nmdc_mta07p39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:23d1f31eaec7a258b1bbf7603a6d0999,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a660bd4e94f2d63bf97db55683d0179c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7330adf38677d7208e6781f86de643dd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:56198e1331e2aa4abbf7111ec8932d24,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d2215e5967a2d030136aa0d1f0827ada,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:20d0f922d2e4e998fe270a600eb9c2fd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c9888622d072f56901b973d6c4cc7743,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fcd3ce4ca8c2e36c6083d268cb7df754,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d526aa31b4a178ee71b458ad9150e1d6,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7d58f93ea531e5af2987158f4143e15e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:582ff73afaabe43cea8c166be399ee04,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0918dcb1de867fc32ded105a3bb7c578,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b5ee5646b7719c841c47717b524cbb90,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4ee10396bbcb30c2465209a0fb88c716,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7330adf38677d7208e6781f86de643dd,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60363d0145de148444a3b1d6b3ff6b77,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:81724680f3db0d43d84bbf51398970d3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:56198e1331e2aa4abbf7111ec8932d24,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7381be5d87d0d890a83c58344dac40de,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:23d1f31eaec7a258b1bbf7603a6d0999,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:686cc16e9ad9b26e396a607c5340897f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a660bd4e94f2d63bf97db55683d0179c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be055580c00c0f56fbb4616562322188,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eede1ec8adbd1073aa544811b1384e60,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0918dcb1de867fc32ded105a3bb7c578,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3fe94ef439385d469f80b3c577e052d2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:686cc16e9ad9b26e396a607c5340897f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d2215e5967a2d030136aa0d1f0827ada,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7381be5d87d0d890a83c58344dac40de,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4ee10396bbcb30c2465209a0fb88c716,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fcd3ce4ca8c2e36c6083d268cb7df754,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c9888622d072f56901b973d6c4cc7743,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:582ff73afaabe43cea8c166be399ee04,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c017a4c845d0a76b5250acbce5325d43,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be055580c00c0f56fbb4616562322188,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b5ee5646b7719c841c47717b524cbb90,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:81724680f3db0d43d84bbf51398970d3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7d58f93ea531e5af2987158f4143e15e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d526aa31b4a178ee71b458ad9150e1d6,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:84b1d252ae043684f6ea4d1444bffd64, Annotation Activity for nmdc_mta07p39 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7975,28 +7975,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208348 INFO:root:found 1 records INFO:root:record: nmdc:1fc013a66057310a031047fbe9562c25, Annotation Activity for nmdc_mta06w20 ERROR:root:OmicsMissingHasOutput: nmdc:1fc013a66057310a031047fbe9562c25, Annotation Activity for nmdc_mta06w20 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:55cb2e11da61e5638c7a1ae58bfce3cd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2e65c691e5b4b89d77874b684a88cfca,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6cd6cb082c5452dda420c9422e5d709c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:000333b6ae88eef40076b492ea610e16,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:006dcc8dcf4954f444af53310de48d7b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e70268b719eb21b9b5d9bd2a528cc38e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:56c98cbfe22f509b78a6076e82618ffe,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db434f24ac6accfb6012bdba270c6b07,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6b0dd988a704954d93dbd21897a5632b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:43c38d63f48dd2a20c14b916ad739d46,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1cc3f419a15688e04992d39974b3eae7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:58007f51e48c5bb958ae40817b15a26d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:43c38d63f48dd2a20c14b916ad739d46,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7e44aea77a346701a78a2c9b3677c5c7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45ebfa4752a9d9f082387b729001f143,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3f4c27bbdb0a4512b9c4ddb1a523673f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e70268b719eb21b9b5d9bd2a528cc38e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:01ff3293d1c9b75087edf649aa3b17d8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:afcfb360806a009358b7f55774986f0f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db434f24ac6accfb6012bdba270c6b07,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:56c98cbfe22f509b78a6076e82618ffe,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eb7a2813dcd334e5ea3c0d00d72431eb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:664f0291877f2ed53acaf7a5c1b95073,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ce37745e385ec76aad48cdaa0a778a11,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6b0dd988a704954d93dbd21897a5632b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6e6eeacd5169389228692d7fb917bf70,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1cc3f419a15688e04992d39974b3eae7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6cd6cb082c5452dda420c9422e5d709c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eb7a2813dcd334e5ea3c0d00d72431eb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3f4c27bbdb0a4512b9c4ddb1a523673f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:000333b6ae88eef40076b492ea610e16,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45ebfa4752a9d9f082387b729001f143,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:972f3a3d307248495873c4d5845dccd9,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:55cb2e11da61e5638c7a1ae58bfce3cd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7e44aea77a346701a78a2c9b3677c5c7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2e65c691e5b4b89d77874b684a88cfca,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6e6eeacd5169389228692d7fb917bf70,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:1fc013a66057310a031047fbe9562c25, Annotation Activity for nmdc_mta06w20 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -8020,8 +8020,8 @@ INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208344 INFO:root:found 1 records INFO:root:record: nmdc:b502fd974951d11591564592ecff731c, Read QC Activity for nmdc_mta0a108 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Read QC Activity for nmdc_mta0a108 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:54a98ed338b3e255e6afd32f69ecd16a,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b73481e8aba62094592e9d7fc48da3ad,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:54a98ed338b3e255e6afd32f69ecd16a,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Read QC Activity for nmdc_mta0a108 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -8039,28 +8039,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208344 INFO:root:found 1 records INFO:root:record: nmdc:b502fd974951d11591564592ecff731c, Annotation Activity for nmdc_mta0a108 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Annotation Activity for nmdc_mta0a108 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:87d56a1b84322be97b89bd0a5207eb1a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8109a57f97545b5484ad1fd48bb47863,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6810e6cf7c5071c17896b3ebe41a68e0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:77643280bd103f51c1ebdc7a0edb50f4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8732f93ddaa09a15bc348d2ebeeaca0c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8b0092c6ddc61d2e10f68283f3b1245c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc29560aaee165288f66b512092b69c7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d78122fa68080462c2e9c6c6a1bff1dc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92ce84bfeb2607a115ac66753be99057,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c12add67618aa05d97e702751a069ce1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:77643280bd103f51c1ebdc7a0edb50f4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8109a57f97545b5484ad1fd48bb47863,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bd1d415e2f936bbda4c717e63a3b7fb1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:32e6e514ccfd34bb82de48691b694632,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6f39de88b14d1bb7e448370570b226ad,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:877f0e6e7c58579c1b47022f52a758ac,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c3578669b4717587efec60cf0e7b344b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5ec87e5be3264eb3fe68c031f36b4282,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92ce84bfeb2607a115ac66753be99057,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c36797782b4e74c72cdf7346c672f171,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c12add67618aa05d97e702751a069ce1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1a661b020131f8b739d506277086cad8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:32e6e514ccfd34bb82de48691b694632,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:450ec3078029f2d3eb75d030f1cdc1b0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8b0092c6ddc61d2e10f68283f3b1245c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bd1d415e2f936bbda4c717e63a3b7fb1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b138fb15e228475c5d3319c2c361b065,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6f39de88b14d1bb7e448370570b226ad,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6810e6cf7c5071c17896b3ebe41a68e0,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9468016ba6fec5600040a0f9d0164e68,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:87d56a1b84322be97b89bd0a5207eb1a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c3578669b4717587efec60cf0e7b344b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1a661b020131f8b739d506277086cad8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d78122fa68080462c2e9c6c6a1bff1dc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b138fb15e228475c5d3319c2c361b065,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bb286ec7502335c39470ce01e9ca4652,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8732f93ddaa09a15bc348d2ebeeaca0c,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Annotation Activity for nmdc_mta0a108 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -8070,8 +8070,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208344 INFO:root:found 1 records INFO:root:record: nmdc:b502fd974951d11591564592ecff731c, Metatranscriptome Activity for nmdc_mta0a108 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Metatranscriptome Activity for nmdc_mta0a108 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5d8a4ad465241c3c26d7d6c1180b2d62,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:11b34e4d8c493593aabe7b97a646bedf,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5d8a4ad465241c3c26d7d6c1180b2d62,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Metatranscriptome Activity for nmdc_mta0a108 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -8103,28 +8103,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208350 INFO:root:found 1 records INFO:root:record: nmdc:a7f1f19facde372fe54b289878c56550, Annotation Activity for nmdc_mta00v17 ERROR:root:OmicsMissingHasOutput: nmdc:a7f1f19facde372fe54b289878c56550, Annotation Activity for nmdc_mta00v17 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cd93b88b6639c271cf1c3d02589a963b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a5f0a949533484094c1abc268ea57b61,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a582302c43414747470b72fe4928437f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b3dac98a76c552807a1283bf87b6be14,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ba94010c37952ba5f32630732d183cb0,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e269c377e141f241b4967b79760aaee5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1b2d9699b4f5576c4cddbac87b3e1a53,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7aec334ef25d393eb0654490ba2e1376,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1773f212b230e55fba6872ce88711610,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:27fdb94a091af4e0a779ede838a0af2d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f43cdcf3d586dcb604a3cebe69781869,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4c63705dfc706b1ec98fb81cbfbb0362,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b4225bb6b268d9588a30ba58b8d4f837,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ad759b77314547d01a54e50707863b62,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6d891081dfae65e17e6ea0da81beb967,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0c51b17f4cf7ddda910dc4b2d62d7f9a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a582302c43414747470b72fe4928437f,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c59e9a6d416a8d78934ae9c5e0704a43,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1387925373a9b8daa722d5f19869b534,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1b2d9699b4f5576c4cddbac87b3e1a53,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f43cdcf3d586dcb604a3cebe69781869,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0a2157ec497c2b6af0921542a9e92401,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a5f0a949533484094c1abc268ea57b61,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d00cc6701024c10bafc2138585a90f8f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ba94010c37952ba5f32630732d183cb0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b3dac98a76c552807a1283bf87b6be14,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cd93b88b6639c271cf1c3d02589a963b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1773f212b230e55fba6872ce88711610,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0a2157ec497c2b6af0921542a9e92401,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1387925373a9b8daa722d5f19869b534,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7283988ab002e99694de4b2e8b738135,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e269c377e141f241b4967b79760aaee5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b4225bb6b268d9588a30ba58b8d4f837,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92805ff62fe4236802b36a32c7d6b5e0,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0c51b17f4cf7ddda910dc4b2d62d7f9a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6d891081dfae65e17e6ea0da81beb967,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ad759b77314547d01a54e50707863b62,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:a7f1f19facde372fe54b289878c56550, Annotation Activity for nmdc_mta00v17 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -8134,8 +8134,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208350 INFO:root:found 1 records INFO:root:record: nmdc:a7f1f19facde372fe54b289878c56550, Metatranscriptome Activity for nmdc_mta00v17 ERROR:root:OmicsMissingHasOutput: nmdc:a7f1f19facde372fe54b289878c56550, Metatranscriptome Activity for nmdc_mta00v17 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:74bd840d80d8f88d3c87b6f3cfad6d38,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:74a981053eb8dfcc4ff36aa1fe38494f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:74bd840d80d8f88d3c87b6f3cfad6d38,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:a7f1f19facde372fe54b289878c56550, Metatranscriptome Activity for nmdc_mta00v17 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -8148,8 +8148,8 @@ INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208355 INFO:root:found 1 records INFO:root:record: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Read QC Activity for nmdc_mta02s25 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Read QC Activity for nmdc_mta02s25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9912b8e301e961447fb4891feed6e36a,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c3649c4bad6e060e219e5851c876a821,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9912b8e301e961447fb4891feed6e36a,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Read QC Activity for nmdc_mta02s25 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -8167,28 +8167,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208355 INFO:root:found 1 records INFO:root:record: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Annotation Activity for nmdc_mta02s25 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Annotation Activity for nmdc_mta02s25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fd6a6fd1e5e42c66320cbd7d67886236,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be46be17b2b0de3df6dd0053ce0df888,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:05268127580ee69bfb3370bba6fa5557,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6421568b1b1a42bb9d7b571a599485e6,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0068723bdafbfa6fa7487c93504dcee1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1103c86b39928173cf47a1386d320d35,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:80b877ce75d54416159ab93358a676e1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:abc1f94aac8bd1a91fd6e9406ff3cd85,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72f9a3cb512be27d7a06c3eb99aa31f9,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0f25ca4d50832bbe01c6614143ef14fc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:74ad839e06ad0b8776f2ae4a9a8bb4be,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9576ba16dab930b2430535b3e49a8f6a,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6eeb2557b318abf21f876d33fdd17198,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1abb7610e3036f2cc7a94d26f0ac57ec,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc4a4aad3c2df74508519e8109bc5412,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:80b877ce75d54416159ab93358a676e1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d8ac3aef66ef58ab482989d599d5d505,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fd6a6fd1e5e42c66320cbd7d67886236,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:99435cedb5ff09cc55ce2a395d75a052,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3fdf19331330e4ad2a145353c4273902,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ed132eefa3624a1d2f3d0d4d34cb8d41,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9576ba16dab930b2430535b3e49a8f6a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6421568b1b1a42bb9d7b571a599485e6,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1abb7610e3036f2cc7a94d26f0ac57ec,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:74ad839e06ad0b8776f2ae4a9a8bb4be,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0f25ca4d50832bbe01c6614143ef14fc,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d37c29ac936ba309c8d572054caea202,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:21513c95a8650b3f6596eedc52229135,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:abc1f94aac8bd1a91fd6e9406ff3cd85,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3fdf19331330e4ad2a145353c4273902,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1103c86b39928173cf47a1386d320d35,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fa5cbe7623226177c2a153446c5d6e27,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d8ac3aef66ef58ab482989d599d5d505,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be46be17b2b0de3df6dd0053ce0df888,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc4a4aad3c2df74508519e8109bc5412,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:05268127580ee69bfb3370bba6fa5557,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ed132eefa3624a1d2f3d0d4d34cb8d41,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0068723bdafbfa6fa7487c93504dcee1,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Annotation Activity for nmdc_mta02s25 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -8231,28 +8231,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208349 INFO:root:found 1 records INFO:root:record: nmdc:944e7a4a1a3070061bac6414ec994622, Annotation Activity for nmdc_mta0dy21 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Annotation Activity for nmdc_mta0dy21 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4dacbdd8208c98cfe87c581196782a08,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8e0cd148df80eeb2b2c466f89ba513f5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:61a8c2af85f38bd4dabcefbbaef64469,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4970daf3007715cd16da7cdcff46ccb6,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:87703451501d0882cdf1a44898d33a45,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dad47e1ea9b255d4c418ade3b5d94f44,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c2909fdab8e2213d71298020af35ab64,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c35c64edbe593b3a9c99caab119d9dcb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c846c05ddde0bd9dc7bf2d555e3ca74c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ebf5defe9de2e4e134f46e271698d0e2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:58033b7adf76087bce2b7ca8a8111c76,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f4b738caea41366e79c3c27bfec1d6a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4970daf3007715cd16da7cdcff46ccb6,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:339a7cdba869d38093778b164efc8330,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7f7b1e63df1742356dc0566b67ae8547,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:46aa02710cb6a87d5be6de7dd55eed3e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a7c5f384baa013b730d2e6093ff88a8f,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:09a0856b1629aea54ce8576bbbd5f430,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:58033b7adf76087bce2b7ca8a8111c76,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:46aa02710cb6a87d5be6de7dd55eed3e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4dacbdd8208c98cfe87c581196782a08,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f6713ede604e0acf1b8fe5397d99d68,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8af439ec05648a5f60477a877a1c144e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c846c05ddde0bd9dc7bf2d555e3ca74c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f871db69d3dc259230c03ab8bece4ee0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d89ee02cca8dcd4191ffaa14289426a1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:339a7cdba869d38093778b164efc8330,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c2909fdab8e2213d71298020af35ab64,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7f7b1e63df1742356dc0566b67ae8547,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c35c64edbe593b3a9c99caab119d9dcb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:53f136cb338a37ba8d5c30cf5c86374a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8af439ec05648a5f60477a877a1c144e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f6713ede604e0acf1b8fe5397d99d68,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ebf5defe9de2e4e134f46e271698d0e2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d89ee02cca8dcd4191ffaa14289426a1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8e0cd148df80eeb2b2c466f89ba513f5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:61a8c2af85f38bd4dabcefbbaef64469,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a7c5f384baa013b730d2e6093ff88a8f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dad47e1ea9b255d4c418ade3b5d94f44,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Annotation Activity for nmdc_mta0dy21 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -8262,8 +8262,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208349 INFO:root:found 1 records INFO:root:record: nmdc:944e7a4a1a3070061bac6414ec994622, Metatranscriptome Activity for nmdc_mta0dy21 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Metatranscriptome Activity for nmdc_mta0dy21 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:81a5cd1cc91a6dbcb5976d72b8cf9eca,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ed49dcdb96b092ac587b6c6cdcfc3f3a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:81a5cd1cc91a6dbcb5976d72b8cf9eca,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Metatranscriptome Activity for nmdc_mta0dy21 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -8276,8 +8276,8 @@ INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208357 INFO:root:found 1 records INFO:root:record: nmdc:98cff95ffc921c0c51deec0308e33f2b, Read QC Activity for nmdc_mta0dx24 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Read QC Activity for nmdc_mta0dx24 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3628a9a93ecf059328ec403634155cce,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ef5f9738c3612c740e2fbf391044aa5b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3628a9a93ecf059328ec403634155cce,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Read QC Activity for nmdc_mta0dx24 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -8295,28 +8295,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208357 INFO:root:found 1 records INFO:root:record: nmdc:98cff95ffc921c0c51deec0308e33f2b, Annotation Activity for nmdc_mta0dx24 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Annotation Activity for nmdc_mta0dx24 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b308f5348144a9f630f2ce44288591b8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0e2eedef8c3b65f5a85b1e63ac09d3d7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:809065700dde302d6a61064d10b2b2cc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2751241569d0de50eab4a3948e5af105,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b98b737a52de2cb08d141a62df131c3a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1864be0cbe3f5af6e977e19d3627df54,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6bd7c1829029bf1c0f47bc85e9945f20,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d76e1f1e19fd450954b7049622557e61,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b98b737a52de2cb08d141a62df131c3a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:61c9a9e8fde82fea215ff3c64d258c4c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a867e07c653c95cfec8d29bc22bdf461,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2ca78f6fa326d5623197f6fcc81a3553,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d03a320a1812d223d98d09aa9513b062,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bd08b514b3dfdffd5b5e0be6abb40d3b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a867e07c653c95cfec8d29bc22bdf461,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:505ee159e089b9fe7e089ea092329674,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f20279ab74d85c580dd9b21e274bd535,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:982d63cf85b91ea6cb733ee02fc4d6e8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2ac7b52005d8bb30fe3e9ea62fa809ab,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e35232aad1fe332ce8733a12c94c6ed8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1864be0cbe3f5af6e977e19d3627df54,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0e2eedef8c3b65f5a85b1e63ac09d3d7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:82a55e2a9ff718fe6b6655e309762f5d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:61c9a9e8fde82fea215ff3c64d258c4c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f2b5a14ab6c0f2dc446fe168a4229468,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2ac7b52005d8bb30fe3e9ea62fa809ab,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d76e1f1e19fd450954b7049622557e61,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b308f5348144a9f630f2ce44288591b8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e35232aad1fe332ce8733a12c94c6ed8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:874ae537d53586605c16eb50c3a229fc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2751241569d0de50eab4a3948e5af105,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:09db70d29938d68d04510138f4ca740c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f20279ab74d85c580dd9b21e274bd535,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bd08b514b3dfdffd5b5e0be6abb40d3b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:809065700dde302d6a61064d10b2b2cc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:982d63cf85b91ea6cb733ee02fc4d6e8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:505ee159e089b9fe7e089ea092329674,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Annotation Activity for nmdc_mta0dx24 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -8340,8 +8340,8 @@ INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208345 INFO:root:found 1 records INFO:root:record: nmdc:3b4ae5bffe83e6a104c95360d63954de, Read QC Activity for nmdc_mta00292 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Read QC Activity for nmdc_mta00292 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:566cc849f80d611c0a00d63a1908af88,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72af5ce2a69b702d8f2d37596aa13a80,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:566cc849f80d611c0a00d63a1908af88,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Read QC Activity for nmdc_mta00292 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -8359,28 +8359,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208345 INFO:root:found 1 records INFO:root:record: nmdc:3b4ae5bffe83e6a104c95360d63954de, Annotation Activity for nmdc_mta00292 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Annotation Activity for nmdc_mta00292 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a8864986d0abd4c794dd37b276473b6,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7fd9d2f82257a449918fc56dca6af85b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0094dffbc1c866a1346429c022c1dfe8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:18ee2af4843dffed59d3acb8501086ed,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e3f5b1f2a60e99e175c3aa1b447fbfeb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a4e682e5df809689438bb53e6653408,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ab14d09a2602e6981ef4ebf38b416d09,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5aeafb9cf74433b8b52b92f0e0c46019,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b9f63f0fe88f8126b5d0a8a93cfa6c3b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:599a5759a8ea6ea89b2f1c851462c298,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b9f63f0fe88f8126b5d0a8a93cfa6c3b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5aeafb9cf74433b8b52b92f0e0c46019,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0094dffbc1c866a1346429c022c1dfe8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:20354d29f50c6561a838bdfbdcf1c575,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60bbe7e02fdf6862998e290345646e8b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47eb84b27a56061749fea5d243eb4894,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a4e682e5df809689438bb53e6653408,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:99d2a81cfbb0c533a153e01d3349c3ce,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:387fd13d8e18d5205d497e194ab162f2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a8864986d0abd4c794dd37b276473b6,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6170bcd8958c6bd5febeb27e69547fea,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60bbe7e02fdf6862998e290345646e8b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:522640d449c649ace7ed55d3354a6285,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:906abffa3f36f9041f062630da68d950,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e3f5b1f2a60e99e175c3aa1b447fbfeb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f1250b9e4a1a0e530df60fc1324d9a0c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7336e18ce9f6e4569688eaed17e51d83,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47eb84b27a56061749fea5d243eb4894,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c35191da64a8a1148d71ffbaa9ec76e4,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:20354d29f50c6561a838bdfbdcf1c575,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:906abffa3f36f9041f062630da68d950,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:99d2a81cfbb0c533a153e01d3349c3ce,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4180c457c5c0208100316954929b2d9c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7fd9d2f82257a449918fc56dca6af85b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:522640d449c649ace7ed55d3354a6285,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ab14d09a2602e6981ef4ebf38b416d09,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c35191da64a8a1148d71ffbaa9ec76e4,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Annotation Activity for nmdc_mta00292 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -8390,8 +8390,8 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208345 INFO:root:found 1 records INFO:root:record: nmdc:3b4ae5bffe83e6a104c95360d63954de, Metatranscriptome Activity for nmdc_mta00292 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Metatranscriptome Activity for nmdc_mta00292 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4af2d5061aa6838765ab8db292b264e2,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:96f84c366baeadf3a562da5c239ee8a5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4af2d5061aa6838765ab8db292b264e2,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Metatranscriptome Activity for nmdc_mta00292 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 @@ -8404,8 +8404,8 @@ INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208347 INFO:root:found 1 records INFO:root:record: nmdc:6305a511f040e8bef679b8a2e439329e, Read QC Activity for nmdc_mta0r607 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Read QC Activity for nmdc_mta0r607 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4071f33f286e6e5c09971b4da88fb7d6,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5123936595d93e72ec86173f29f0f096,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4071f33f286e6e5c09971b4da88fb7d6,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Read QC Activity for nmdc_mta0r607 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -8423,28 +8423,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208347 INFO:root:found 1 records INFO:root:record: nmdc:6305a511f040e8bef679b8a2e439329e, Annotation Activity for nmdc_mta0r607 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Annotation Activity for nmdc_mta0r607 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:716130c5f415e520c9c64a556902248b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3310c2597f0b1a8e1005ba1f8bba06da,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d0b3804e2acabdef04ceef794205a20d,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ebb96410a8e20a0081842632639108a2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1ecb1e1d685b42559e9e3fe9cddf27b2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c911a02e0f09e31ab3d48be55e360fc8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1a5414d0d898710f6d4f50db6fdd84da,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a141bd880d53a9531b2a203321d85860,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:524ded0fcc5e97934d7037ac5b757351,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a01b5b6cbc4437359277bad32c67d206,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:681dcaa3dbf4762f17843cb16079772a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8727686177aaefac48281df10d8ea9fd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9fc12b5283901dcdad532e3ec7d693c5,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2d1ec86ef28d3340f3f6aab3b1f9f97d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1a5414d0d898710f6d4f50db6fdd84da,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c911a02e0f09e31ab3d48be55e360fc8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f8ccb9d5c170ba3bfe16ab1363cba31,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a01b5b6cbc4437359277bad32c67d206,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d0b3804e2acabdef04ceef794205a20d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cb4d55ac9d2f2ad992a8b8e6c1bc6044,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:626ebca383501deebf357cd74168bf55,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d830add00f1e7822a748f81e99edbc30,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9fc12b5283901dcdad532e3ec7d693c5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1ecb1e1d685b42559e9e3fe9cddf27b2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:716130c5f415e520c9c64a556902248b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:845c84d682755143aa374ac6ba80901c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3310c2597f0b1a8e1005ba1f8bba06da,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:524ded0fcc5e97934d7037ac5b757351,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:11f79bd87213158e47756ba99bcebf6d,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3a1e67eb420e6a818fe803fca6d29dba,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d830add00f1e7822a748f81e99edbc30,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6df88fc5897009b09d4fa774ad7a2879,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8727686177aaefac48281df10d8ea9fd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cb4d55ac9d2f2ad992a8b8e6c1bc6044,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:11f79bd87213158e47756ba99bcebf6d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:626ebca383501deebf357cd74168bf55,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a141bd880d53a9531b2a203321d85860,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Annotation Activity for nmdc_mta0r607 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -8454,13 +8454,13 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208347 INFO:root:found 1 records INFO:root:record: nmdc:6305a511f040e8bef679b8a2e439329e, Metatranscriptome Activity for nmdc_mta0r607 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Metatranscriptome Activity for nmdc_mta0r607 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c46d12ccd3b0fc0c08e1182c56223c92,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1b0a42540b22fac68bd801cc0e2615e1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c46d12ccd3b0fc0c08e1182c56223c92,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Metatranscriptome Activity for nmdc_mta0r607 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:Writing 107 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json -INFO:root:Elapsed time: 525.423449754715 +INFO:root:Elapsed time: 561.1880991458893 INFO:root:Writing 33 failed records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_failed_record_dump.json INFO:root:Found 16 omics processing records with missing has_output INFO:root:Found 0 read qc records with missing data objects diff --git a/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_process_records.log b/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_process_records.log index 24da6f5c..148c75b1 100644 --- a/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_process_records.log +++ b/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_process_records.log @@ -5,9401 +5,9401 @@ INFO:root:Using data_dir: /global/cfs/cdirs/m3408/results INFO:root:Using db_infile: /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json INFO:root:Read 107 records from db_infile INFO:root:omics_processing_id: nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d16af5ca7671f7dc42de14deb8b0dd5 nmdc:dobj-11-cwq6c530 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d16af5ca7671f7dc42de14deb8b0dd5 nmdc:dobj-11-mk8g0z48 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-av2pt607 -INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gxr6pa85.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-gxr6pa85.1 +INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-t1jppb58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-t1jppb58.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bcffdf80842f9fcb2c9c62c35ad28c6 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-gxr6pa85.1/nmdc_wfrqc-11-gxr6pa85.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bcffdf80842f9fcb2c9c62c35ad28c6 nmdc:dobj-11-e1kaqq09 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-t1jppb58.1/nmdc_wfrqc-11-t1jppb58.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bcffdf80842f9fcb2c9c62c35ad28c6 nmdc:dobj-11-tn50vn13 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gxr6pa85.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-t1jppb58.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56ba958be56af80bb4fc27f4635edaa5 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-gxr6pa85.1/nmdc_wfrqc-11-gxr6pa85.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56ba958be56af80bb4fc27f4635edaa5 nmdc:dobj-11-ka333d60 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-t1jppb58.1/nmdc_wfrqc-11-t1jppb58.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56ba958be56af80bb4fc27f4635edaa5 nmdc:dobj-11-wr7kpt85 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gxr6pa85.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfrqc-11-gxr6pa85.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-t1jppb58.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfrqc-11-t1jppb58.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-av2pt607 -INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-m7cs3g40.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1 +INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-w1c72c19.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-w1c72c19.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de nmdc:dobj-11-ne8had46 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-w1c72c19.1/nmdc_wfmgas-11-w1c72c19.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de nmdc:dobj-11-6cjsyv87 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w1c72c19.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:582604e1df5f4337462b29ce34f2c02e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:582604e1df5f4337462b29ce34f2c02e nmdc:dobj-11-63tk3b25 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-w1c72c19.1/nmdc_wfmgas-11-w1c72c19.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:582604e1df5f4337462b29ce34f2c02e nmdc:dobj-11-qgq3z347 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w1c72c19.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:623f8105bab94519da3d5a620b8bf6da -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:623f8105bab94519da3d5a620b8bf6da nmdc:dobj-11-k811wb52 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-w1c72c19.1/nmdc_wfmgas-11-w1c72c19.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:623f8105bab94519da3d5a620b8bf6da nmdc:dobj-11-rc8fjg35 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w1c72c19.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3393ec1177ba82d1b16364a757a19173 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3393ec1177ba82d1b16364a757a19173 nmdc:dobj-11-ttfd9c15 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-w1c72c19.1/nmdc_wfmgas-11-w1c72c19.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3393ec1177ba82d1b16364a757a19173 nmdc:dobj-11-f6fgxb40 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w1c72c19.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:19023d87b3cdd9de7b40dbfc23e38c89 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19023d87b3cdd9de7b40dbfc23e38c89 nmdc:dobj-11-rktt8107 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-w1c72c19.1/nmdc_wfmgas-11-w1c72c19.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19023d87b3cdd9de7b40dbfc23e38c89 nmdc:dobj-11-am6k3v70 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfmgas-11-m7cs3g40.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w1c72c19.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfmgas-11-w1c72c19.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-av2pt607 -INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-v6s5t524.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1 +INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-3x698x30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dce7c900d1ab453a1d95bd3979c7a017 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dce7c900d1ab453a1d95bd3979c7a017 nmdc:dobj-11-mkhm5954 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dce7c900d1ab453a1d95bd3979c7a017 nmdc:dobj-11-zfatjz50 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 nmdc:dobj-11-yaz6rz52 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 nmdc:dobj-11-q21j8n96 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5468325ed4b6b62bb116ff5142ff33d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5468325ed4b6b62bb116ff5142ff33d nmdc:dobj-11-csasr793 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5468325ed4b6b62bb116ff5142ff33d nmdc:dobj-11-rcmx1a65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a9b94f65b6f0af2208735238ddeb02c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a9b94f65b6f0af2208735238ddeb02c nmdc:dobj-11-9cggza52 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a9b94f65b6f0af2208735238ddeb02c nmdc:dobj-11-afv45412 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa401a0a97e73130ebfffcb25efef945 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa401a0a97e73130ebfffcb25efef945 nmdc:dobj-11-md317864 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa401a0a97e73130ebfffcb25efef945 nmdc:dobj-11-a3za5939 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3d3f0f87d622ef5a110bb494b8c95f0 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3d3f0f87d622ef5a110bb494b8c95f0 nmdc:dobj-11-rj5kfr60 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3d3f0f87d622ef5a110bb494b8c95f0 nmdc:dobj-11-0yghek50 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1fd51f1e8db0648782ae6d29e583d5b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1fd51f1e8db0648782ae6d29e583d5b nmdc:dobj-11-fzt58s60 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1fd51f1e8db0648782ae6d29e583d5b nmdc:dobj-11-t4xs7615 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:11bee827a9abef578eb6610dc515fe04 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11bee827a9abef578eb6610dc515fe04 nmdc:dobj-11-mwh66442 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11bee827a9abef578eb6610dc515fe04 nmdc:dobj-11-f0aspb62 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:920790e781e64cd3eed3a32c521ffda7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:920790e781e64cd3eed3a32c521ffda7 nmdc:dobj-11-gaw01g24 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-3x698x30.1/nmdc_wfrbt-11-3x698x30.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:920790e781e64cd3eed3a32c521ffda7 nmdc:dobj-11-nq7mj846 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfrbt-11-v6s5t524.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3x698x30.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfrbt-11-3x698x30.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-av2pt607 INFO:root:omics_processing_id: nmdc:omprc-11-8nny2x31 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a3baceee6e3dd4c4fc13567c2fd5df3 nmdc:dobj-11-t38tq129 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a3baceee6e3dd4c4fc13567c2fd5df3 nmdc:dobj-11-wnhyfb02 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8nny2x31 -INFO:root:New activity id created for nmdc:omprc-11-8nny2x31 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-njvptx61.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-njvptx61.1 +INFO:root:New activity id created for nmdc:omprc-11-8nny2x31 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rsbz1312.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-rsbz1312.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39dfcb6a3f2afed8306b3666ec98c75b -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-njvptx61.1/nmdc_wfrqc-11-njvptx61.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39dfcb6a3f2afed8306b3666ec98c75b nmdc:dobj-11-4bjd9933 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-rsbz1312.1/nmdc_wfrqc-11-rsbz1312.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39dfcb6a3f2afed8306b3666ec98c75b nmdc:dobj-11-bhjhj131 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8nny2x31 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-njvptx61.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rsbz1312.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88f1d63bc4bbca5e443d53b878eea85a -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-njvptx61.1/nmdc_wfrqc-11-njvptx61.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88f1d63bc4bbca5e443d53b878eea85a nmdc:dobj-11-9wvavv14 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-rsbz1312.1/nmdc_wfrqc-11-rsbz1312.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88f1d63bc4bbca5e443d53b878eea85a nmdc:dobj-11-kzm87997 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-8nny2x31 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-njvptx61.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a5fba8fca3b75c9e0b564a8e311adf46 nmdc:wfrqc-11-njvptx61.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rsbz1312.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a5fba8fca3b75c9e0b564a8e311adf46 nmdc:wfrqc-11-rsbz1312.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-8nny2x31 -INFO:root:New activity id created for nmdc:omprc-11-8nny2x31 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qt24b694.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1 +INFO:root:New activity id created for nmdc:omprc-11-8nny2x31 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4pjzqk07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-4pjzqk07.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb0d9e427179d63f3b38a5fc2eb53c02 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb0d9e427179d63f3b38a5fc2eb53c02 nmdc:dobj-11-fse1n644 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-4pjzqk07.1/nmdc_wfmgas-11-4pjzqk07.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb0d9e427179d63f3b38a5fc2eb53c02 nmdc:dobj-11-8kjpd232 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-8nny2x31 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pjzqk07.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d nmdc:dobj-11-wr2xsb86 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-4pjzqk07.1/nmdc_wfmgas-11-4pjzqk07.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d nmdc:dobj-11-5awpfk85 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-8nny2x31 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pjzqk07.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 nmdc:dobj-11-akkw0089 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-4pjzqk07.1/nmdc_wfmgas-11-4pjzqk07.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 nmdc:dobj-11-cb0hqm91 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-8nny2x31 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pjzqk07.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a574224aebfebcc159a8eca738f9959 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a574224aebfebcc159a8eca738f9959 nmdc:dobj-11-4yn4s190 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-4pjzqk07.1/nmdc_wfmgas-11-4pjzqk07.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a574224aebfebcc159a8eca738f9959 nmdc:dobj-11-5atd1c84 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-8nny2x31 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pjzqk07.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:baacf8df3c4d301e397f4e2202cf68b1 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baacf8df3c4d301e397f4e2202cf68b1 nmdc:dobj-11-sbdkj990 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-4pjzqk07.1/nmdc_wfmgas-11-4pjzqk07.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baacf8df3c4d301e397f4e2202cf68b1 nmdc:dobj-11-kmcs8532 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-8nny2x31 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a5fba8fca3b75c9e0b564a8e311adf46 nmdc:wfmgas-11-qt24b694.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pjzqk07.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a5fba8fca3b75c9e0b564a8e311adf46 nmdc:wfmgas-11-4pjzqk07.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-8nny2x31 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8nny2x31 INFO:root:omics_processing_id: nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91ab0ce1ea61b477a64e57a872624cb4 nmdc:dobj-11-98j39q46 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91ab0ce1ea61b477a64e57a872624cb4 nmdc:dobj-11-dedec213 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-kehaxy70 -INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-48efbr86.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-48efbr86.1 +INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zjc27y07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-zjc27y07.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86750c55b1a31ad521879421b0412a84 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-48efbr86.1/nmdc_wfrqc-11-48efbr86.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86750c55b1a31ad521879421b0412a84 nmdc:dobj-11-qt756c82 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-zjc27y07.1/nmdc_wfrqc-11-zjc27y07.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86750c55b1a31ad521879421b0412a84 nmdc:dobj-11-tb3ts493 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-48efbr86.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zjc27y07.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:83dc80cba46c2e8979928b07d7cacc52 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-48efbr86.1/nmdc_wfrqc-11-48efbr86.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83dc80cba46c2e8979928b07d7cacc52 nmdc:dobj-11-74tn6695 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-zjc27y07.1/nmdc_wfrqc-11-zjc27y07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83dc80cba46c2e8979928b07d7cacc52 nmdc:dobj-11-np55e272 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-48efbr86.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfrqc-11-48efbr86.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zjc27y07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfrqc-11-zjc27y07.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-kehaxy70 -INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7t7cmk09.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1 +INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ddvvtj05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-ddvvtj05.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74d5bc61e3be4595a9ad0df3bbd3797f -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74d5bc61e3be4595a9ad0df3bbd3797f nmdc:dobj-11-3zp2zd26 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-ddvvtj05.1/nmdc_wfmgas-11-ddvvtj05.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74d5bc61e3be4595a9ad0df3bbd3797f nmdc:dobj-11-ymaqax50 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddvvtj05.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47d64c1d12dbeb9f477a3d5136bb86c1 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d64c1d12dbeb9f477a3d5136bb86c1 nmdc:dobj-11-5hvv9g68 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-ddvvtj05.1/nmdc_wfmgas-11-ddvvtj05.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d64c1d12dbeb9f477a3d5136bb86c1 nmdc:dobj-11-86vjrc23 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddvvtj05.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8aedb23e2b4fa5c601e57f6910396da -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8aedb23e2b4fa5c601e57f6910396da nmdc:dobj-11-c408gp13 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-ddvvtj05.1/nmdc_wfmgas-11-ddvvtj05.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8aedb23e2b4fa5c601e57f6910396da nmdc:dobj-11-gxpgg903 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddvvtj05.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53fd9f9a2c4c536c87a5019541a4fb0d -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53fd9f9a2c4c536c87a5019541a4fb0d nmdc:dobj-11-ras9yq12 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-ddvvtj05.1/nmdc_wfmgas-11-ddvvtj05.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53fd9f9a2c4c536c87a5019541a4fb0d nmdc:dobj-11-7mfvgt34 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddvvtj05.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 nmdc:dobj-11-bmfzna45 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-ddvvtj05.1/nmdc_wfmgas-11-ddvvtj05.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 nmdc:dobj-11-cnbvfc65 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfmgas-11-7t7cmk09.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddvvtj05.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfmgas-11-ddvvtj05.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-kehaxy70 -INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-72950944.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1 +INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-xap2wm51.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b149c1f7ee97c58fc80e9d1e846370c -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b149c1f7ee97c58fc80e9d1e846370c nmdc:dobj-11-c1dzx032 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b149c1f7ee97c58fc80e9d1e846370c nmdc:dobj-11-1xftg173 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:108ee81d2b63a8bfdcdffd57a2527449 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:108ee81d2b63a8bfdcdffd57a2527449 nmdc:dobj-11-ppk8ch10 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:108ee81d2b63a8bfdcdffd57a2527449 nmdc:dobj-11-g67v7y81 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:457fd17d3206e438c0923d5a476e4da6 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:457fd17d3206e438c0923d5a476e4da6 nmdc:dobj-11-bzcb9m70 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:457fd17d3206e438c0923d5a476e4da6 nmdc:dobj-11-s2sy3779 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ac7432d14596f5a627ec1335698f2a8 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ac7432d14596f5a627ec1335698f2a8 nmdc:dobj-11-ke9y6c18 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ac7432d14596f5a627ec1335698f2a8 nmdc:dobj-11-vw4jf660 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f19bb4b52cad7f784386f91e155f999a -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f19bb4b52cad7f784386f91e155f999a nmdc:dobj-11-c5sn6750 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f19bb4b52cad7f784386f91e155f999a nmdc:dobj-11-sr7gbx48 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5f2240a59f252bd85b05dfea67935a0 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5f2240a59f252bd85b05dfea67935a0 nmdc:dobj-11-p8h5an44 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5f2240a59f252bd85b05dfea67935a0 nmdc:dobj-11-z9tfm086 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9493a2d1a5bc0fa675a045672c2a0e81 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9493a2d1a5bc0fa675a045672c2a0e81 nmdc:dobj-11-wxr21a08 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9493a2d1a5bc0fa675a045672c2a0e81 nmdc:dobj-11-vp92jk84 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d6e2df5e68ee64e0b238c9933b63ab6f -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6e2df5e68ee64e0b238c9933b63ab6f nmdc:dobj-11-rfcpbn11 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6e2df5e68ee64e0b238c9933b63ab6f nmdc:dobj-11-apnd4928 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c58aef8eb55d4340c74407874ddd5d7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c58aef8eb55d4340c74407874ddd5d7 nmdc:dobj-11-31bzjv69 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-xap2wm51.1/nmdc_wfrbt-11-xap2wm51.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c58aef8eb55d4340c74407874ddd5d7 nmdc:dobj-11-br3v6z89 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfrbt-11-72950944.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xap2wm51.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfrbt-11-xap2wm51.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-kehaxy70 INFO:root:omics_processing_id: nmdc:omprc-11-vy356n82 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f80860812e425dd92344f1f056d3d7e nmdc:dobj-11-rvh6yz27 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f80860812e425dd92344f1f056d3d7e nmdc:dobj-11-jhrr6g79 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-vy356n82 -INFO:root:New activity id created for nmdc:omprc-11-vy356n82 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8hwyac55.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-8hwyac55.1 +INFO:root:New activity id created for nmdc:omprc-11-vy356n82 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3ppfc818.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-3ppfc818.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad6ccb8e44538b418e5a90a47a3a95b8 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-8hwyac55.1/nmdc_wfrqc-11-8hwyac55.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad6ccb8e44538b418e5a90a47a3a95b8 nmdc:dobj-11-5qtn5j92 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-3ppfc818.1/nmdc_wfrqc-11-3ppfc818.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad6ccb8e44538b418e5a90a47a3a95b8 nmdc:dobj-11-hp12hk76 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-vy356n82 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8hwyac55.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3ppfc818.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6ff08bff105c41ebee127d980006ba79 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-8hwyac55.1/nmdc_wfrqc-11-8hwyac55.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ff08bff105c41ebee127d980006ba79 nmdc:dobj-11-91e3fm68 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-3ppfc818.1/nmdc_wfrqc-11-3ppfc818.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ff08bff105c41ebee127d980006ba79 nmdc:dobj-11-t07jx073 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-vy356n82 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8hwyac55.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 nmdc:wfrqc-11-8hwyac55.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3ppfc818.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 nmdc:wfrqc-11-3ppfc818.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-vy356n82 -INFO:root:New activity id created for nmdc:omprc-11-vy356n82 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-px30dj23.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1 +INFO:root:New activity id created for nmdc:omprc-11-vy356n82 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rs520j72.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-rs520j72.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c5a5690d01093f5eb72862fb98e0988 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c5a5690d01093f5eb72862fb98e0988 nmdc:dobj-11-7a0yqt89 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-rs520j72.1/nmdc_wfmgas-11-rs520j72.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c5a5690d01093f5eb72862fb98e0988 nmdc:dobj-11-hm7x9h37 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-vy356n82 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rs520j72.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c2acd3eec955d6680787392cd3793c5 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c2acd3eec955d6680787392cd3793c5 nmdc:dobj-11-qs7ept71 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-rs520j72.1/nmdc_wfmgas-11-rs520j72.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c2acd3eec955d6680787392cd3793c5 nmdc:dobj-11-8a6pq338 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-vy356n82 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rs520j72.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7711cd75bbcab369e2b44f73b2c01fcb -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7711cd75bbcab369e2b44f73b2c01fcb nmdc:dobj-11-g1vpkz33 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-rs520j72.1/nmdc_wfmgas-11-rs520j72.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7711cd75bbcab369e2b44f73b2c01fcb nmdc:dobj-11-wwvw1q11 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-vy356n82 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rs520j72.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4babbf701f66184084f500079d31a005 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4babbf701f66184084f500079d31a005 nmdc:dobj-11-12gmwe06 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-rs520j72.1/nmdc_wfmgas-11-rs520j72.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4babbf701f66184084f500079d31a005 nmdc:dobj-11-gvejx293 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-vy356n82 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rs520j72.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48c2645a14aecfee5bcbcd5e650a49ad -INFO:root:New file path computed for Assembly Coverage BAM: 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path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1dfc047ba2e0f5eb215770777e96581 nmdc:dobj-11-3k3chh92 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-86r63g26.1/nmdc_wfrbt-11-86r63g26.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1dfc047ba2e0f5eb215770777e96581 nmdc:dobj-11-78yndr95 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-86r63g26.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cfcf2defaa1760ebbb3f41e479d854ad -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfcf2defaa1760ebbb3f41e479d854ad nmdc:dobj-11-dwjpws40 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-86r63g26.1/nmdc_wfrbt-11-86r63g26.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfcf2defaa1760ebbb3f41e479d854ad nmdc:dobj-11-g44vv744 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-86r63g26.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:170d1ae61e822af33e8808f9f579e702 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:170d1ae61e822af33e8808f9f579e702 nmdc:dobj-11-hqfpwp98 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-86r63g26.1/nmdc_wfrbt-11-86r63g26.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:170d1ae61e822af33e8808f9f579e702 nmdc:dobj-11-es5r8390 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-86r63g26.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d558a4ade655a4995104fcf89a97fdfa -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d558a4ade655a4995104fcf89a97fdfa nmdc:dobj-11-d0phvc56 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-86r63g26.1/nmdc_wfrbt-11-86r63g26.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d558a4ade655a4995104fcf89a97fdfa nmdc:dobj-11-wg2eps93 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-86r63g26.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1149272190dabdc7eb40ae4dad2151e -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1149272190dabdc7eb40ae4dad2151e nmdc:dobj-11-nzs93822 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-86r63g26.1/nmdc_wfrbt-11-86r63g26.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1149272190dabdc7eb40ae4dad2151e nmdc:dobj-11-rggfdg02 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3021b918990263d8bf877ff41bf62f09 nmdc:wfrbt-11-pxqh7822.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-86r63g26.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3021b918990263d8bf877ff41bf62f09 nmdc:wfrbt-11-86r63g26.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-prb0cv32 INFO:root:omics_processing_id: nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754dde7a211a1cd9ecfb990d799c86fc nmdc:dobj-11-3k8g3430 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754dde7a211a1cd9ecfb990d799c86fc nmdc:dobj-11-hvszxd09 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-wg551q49 -INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mdha6k07.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-mdha6k07.1 +INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-yzs70809.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-yzs70809.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b2aacef76b2233c11c9b78d9cdd8490f -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-mdha6k07.1/nmdc_wfrqc-11-mdha6k07.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2aacef76b2233c11c9b78d9cdd8490f nmdc:dobj-11-kajfch87 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-yzs70809.1/nmdc_wfrqc-11-yzs70809.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2aacef76b2233c11c9b78d9cdd8490f nmdc:dobj-11-9sm32589 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mdha6k07.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-yzs70809.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:976360d3303c62ead30c78611545360b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-mdha6k07.1/nmdc_wfrqc-11-mdha6k07.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:976360d3303c62ead30c78611545360b nmdc:dobj-11-sqgkqt87 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-yzs70809.1/nmdc_wfrqc-11-yzs70809.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:976360d3303c62ead30c78611545360b nmdc:dobj-11-jbt4nt28 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mdha6k07.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfrqc-11-mdha6k07.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-yzs70809.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfrqc-11-yzs70809.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-wg551q49 -INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5zdx9045.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1 +INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xyrj4056.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-xyrj4056.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9301ff56d934a5547d16b3872a8a7bd1 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9301ff56d934a5547d16b3872a8a7bd1 nmdc:dobj-11-b7zy4q85 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-xyrj4056.1/nmdc_wfmgas-11-xyrj4056.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9301ff56d934a5547d16b3872a8a7bd1 nmdc:dobj-11-ggwk2x98 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xyrj4056.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:240379c705c2598b90752197e2aa8989 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:240379c705c2598b90752197e2aa8989 nmdc:dobj-11-3mxfkq06 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-xyrj4056.1/nmdc_wfmgas-11-xyrj4056.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:240379c705c2598b90752197e2aa8989 nmdc:dobj-11-e4404a09 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xyrj4056.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53e156196225b31e3a13394345c3623a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53e156196225b31e3a13394345c3623a nmdc:dobj-11-ksfhz953 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-xyrj4056.1/nmdc_wfmgas-11-xyrj4056.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53e156196225b31e3a13394345c3623a nmdc:dobj-11-narehg11 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xyrj4056.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc9d10f32066256bc9f37e6769bd21f5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc9d10f32066256bc9f37e6769bd21f5 nmdc:dobj-11-x0j1za16 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-xyrj4056.1/nmdc_wfmgas-11-xyrj4056.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc9d10f32066256bc9f37e6769bd21f5 nmdc:dobj-11-fjamhp25 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xyrj4056.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c315d571185b157f596d9a21884aa537 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c315d571185b157f596d9a21884aa537 nmdc:dobj-11-vp2z6m37 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-xyrj4056.1/nmdc_wfmgas-11-xyrj4056.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c315d571185b157f596d9a21884aa537 nmdc:dobj-11-t3xh1468 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfmgas-11-5zdx9045.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xyrj4056.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfmgas-11-xyrj4056.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-wg551q49 -INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-tz3kj969.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1 +INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-9yb4bk94.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21b08100a7f2d915a81862b906c6ae3b -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21b08100a7f2d915a81862b906c6ae3b nmdc:dobj-11-ywfpph95 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21b08100a7f2d915a81862b906c6ae3b nmdc:dobj-11-vj794q52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:54e0ddea48ee8d813764492555b0ecee -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54e0ddea48ee8d813764492555b0ecee nmdc:dobj-11-6ppkc770 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54e0ddea48ee8d813764492555b0ecee nmdc:dobj-11-rddhdq34 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:038da6464f3c29fa2dd9f67041a9b32f -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:038da6464f3c29fa2dd9f67041a9b32f nmdc:dobj-11-y38jhy92 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:038da6464f3c29fa2dd9f67041a9b32f nmdc:dobj-11-7ghyz112 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31a7903e5c86cbe82392986253615bcf -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31a7903e5c86cbe82392986253615bcf nmdc:dobj-11-w9vdse21 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31a7903e5c86cbe82392986253615bcf nmdc:dobj-11-sbq2az12 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ef970fcebe1b3873ea2c158b9b6cd19e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef970fcebe1b3873ea2c158b9b6cd19e nmdc:dobj-11-v699zm24 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef970fcebe1b3873ea2c158b9b6cd19e nmdc:dobj-11-tyfntm95 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:14265744b93c11fc6ba858781cb48c88 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14265744b93c11fc6ba858781cb48c88 nmdc:dobj-11-039mh411 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14265744b93c11fc6ba858781cb48c88 nmdc:dobj-11-d1wpft80 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cf637d814c9beb9a726b1ba61b44b75 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cf637d814c9beb9a726b1ba61b44b75 nmdc:dobj-11-6nc3kb98 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cf637d814c9beb9a726b1ba61b44b75 nmdc:dobj-11-45xck352 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d097453c5bd6aca2e844c7836f19dcfa -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d097453c5bd6aca2e844c7836f19dcfa nmdc:dobj-11-e0275t53 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d097453c5bd6aca2e844c7836f19dcfa nmdc:dobj-11-b236k210 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e979e1b9c4f241085492eab236b2829 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e979e1b9c4f241085492eab236b2829 nmdc:dobj-11-v1hdx635 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-9yb4bk94.1/nmdc_wfrbt-11-9yb4bk94.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e979e1b9c4f241085492eab236b2829 nmdc:dobj-11-7khxq406 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfrbt-11-tz3kj969.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9yb4bk94.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfrbt-11-9yb4bk94.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-wg551q49 INFO:root:omics_processing_id: nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74621bf24161e2e072c651c0c489b521 nmdc:dobj-11-mjgtqm98 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74621bf24161e2e072c651c0c489b521 nmdc:dobj-11-gd68pr05 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-wxmc9q81 -INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-v3gqdy80.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrqc-11-v3gqdy80.1 +INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2w4t5e35.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2w4t5e35.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:256392b86fa641cac718035e6d7c9699 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrqc-11-v3gqdy80.1/nmdc_wfrqc-11-v3gqdy80.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:256392b86fa641cac718035e6d7c9699 nmdc:dobj-11-gd60rd75 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrqc-11-2w4t5e35.1/nmdc_wfrqc-11-2w4t5e35.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:256392b86fa641cac718035e6d7c9699 nmdc:dobj-11-9e99ky21 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-v3gqdy80.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfrqc-11-v3gqdy80.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2w4t5e35.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfrqc-11-2w4t5e35.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-wxmc9q81 -INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-abmkha83.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-abmkha83.1 +INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-h650et07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-h650et07.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:27447a319e39a9f2e1284dddb9bc57bb -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-abmkha83.1/nmdc_wfmgas-11-abmkha83.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27447a319e39a9f2e1284dddb9bc57bb nmdc:dobj-11-dw99ps05 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-h650et07.1/nmdc_wfmgas-11-h650et07.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27447a319e39a9f2e1284dddb9bc57bb nmdc:dobj-11-m4jk9571 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-abmkha83.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h650et07.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47c2916418a6cf166df77b0ae1163787 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-abmkha83.1/nmdc_wfmgas-11-abmkha83.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47c2916418a6cf166df77b0ae1163787 nmdc:dobj-11-q49ke787 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-h650et07.1/nmdc_wfmgas-11-h650et07.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47c2916418a6cf166df77b0ae1163787 nmdc:dobj-11-4f2ebv47 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-abmkha83.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h650et07.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:04c4cbeb14a1521973e441e3bf63c6f0 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-abmkha83.1/nmdc_wfmgas-11-abmkha83.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04c4cbeb14a1521973e441e3bf63c6f0 nmdc:dobj-11-xd2nyx82 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-h650et07.1/nmdc_wfmgas-11-h650et07.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04c4cbeb14a1521973e441e3bf63c6f0 nmdc:dobj-11-ecv59z45 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-abmkha83.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h650et07.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d11c1515e21c03b397833054bbfc6d2 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-abmkha83.1/nmdc_wfmgas-11-abmkha83.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d11c1515e21c03b397833054bbfc6d2 nmdc:dobj-11-e1mj1851 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-h650et07.1/nmdc_wfmgas-11-h650et07.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d11c1515e21c03b397833054bbfc6d2 nmdc:dobj-11-wx05g502 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-abmkha83.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h650et07.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31755609cea771c4ffd9cd27e3af227f -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-abmkha83.1/nmdc_wfmgas-11-abmkha83.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31755609cea771c4ffd9cd27e3af227f nmdc:dobj-11-0gza4t81 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-h650et07.1/nmdc_wfmgas-11-h650et07.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31755609cea771c4ffd9cd27e3af227f nmdc:dobj-11-a8exg162 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-abmkha83.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfmgas-11-abmkha83.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h650et07.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfmgas-11-h650et07.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-wxmc9q81 -INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dwbnb755.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1 +INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jf62rw70.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86bbaf4690e2435bbfff1e3fa037e3b1 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bbaf4690e2435bbfff1e3fa037e3b1 nmdc:dobj-11-vjdrr266 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bbaf4690e2435bbfff1e3fa037e3b1 nmdc:dobj-11-3t8ccr16 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3a81e8a2e7369b8fbea40daf94e7238d -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a81e8a2e7369b8fbea40daf94e7238d nmdc:dobj-11-katgpd88 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a81e8a2e7369b8fbea40daf94e7238d nmdc:dobj-11-xwybrb82 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:605c505e6eb56aa78231f4adec6c6677 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:605c505e6eb56aa78231f4adec6c6677 nmdc:dobj-11-bavcm973 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:605c505e6eb56aa78231f4adec6c6677 nmdc:dobj-11-3ezb5634 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 nmdc:dobj-11-tt8h6n26 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 nmdc:dobj-11-rmy4am28 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 nmdc:dobj-11-t47mes72 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 nmdc:dobj-11-4d4x3h14 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ef4135167361ad749a7733e5861c8c6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ef4135167361ad749a7733e5861c8c6 nmdc:dobj-11-yfgq8937 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ef4135167361ad749a7733e5861c8c6 nmdc:dobj-11-h35zxx89 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:11cac1e08774c7809b9b8b1e44b251fd -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11cac1e08774c7809b9b8b1e44b251fd nmdc:dobj-11-xkaksz40 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11cac1e08774c7809b9b8b1e44b251fd nmdc:dobj-11-w4gsng85 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 nmdc:dobj-11-sz2tw755 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 nmdc:dobj-11-81ek7t63 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6935cee3be218ffa94d2b39f92f19f9f -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6935cee3be218ffa94d2b39f92f19f9f nmdc:dobj-11-9v4hbd10 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-jf62rw70.1/nmdc_wfrbt-11-jf62rw70.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6935cee3be218ffa94d2b39f92f19f9f nmdc:dobj-11-1c441f91 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfrbt-11-dwbnb755.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jf62rw70.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfrbt-11-jf62rw70.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-wxmc9q81 INFO:root:omics_processing_id: nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c139345a1c2ba3d6883a53a85463e8e4 nmdc:dobj-11-nxfsmy78 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c139345a1c2ba3d6883a53a85463e8e4 nmdc:dobj-11-ggqt5821 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-tr1vzf47 -INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-e28gbb98.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-e28gbb98.1 +INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8nw8b286.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-8nw8b286.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e397c1b454dc84f97f1bc57052c7193 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-e28gbb98.1/nmdc_wfrqc-11-e28gbb98.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e397c1b454dc84f97f1bc57052c7193 nmdc:dobj-11-5ssdwz21 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-8nw8b286.1/nmdc_wfrqc-11-8nw8b286.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e397c1b454dc84f97f1bc57052c7193 nmdc:dobj-11-f4e28s93 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-e28gbb98.1_filtered.fastq.gz 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nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfrqc-11-e28gbb98.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8nw8b286.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfrqc-11-8nw8b286.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-tr1vzf47 -INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-g4bdyt17.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1 +INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7ek1wx14.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-7ek1wx14.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:472cd76f936bba9446e337c328f435e1 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:472cd76f936bba9446e337c328f435e1 nmdc:dobj-11-dp9xj242 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-7ek1wx14.1/nmdc_wfmgas-11-7ek1wx14.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:472cd76f936bba9446e337c328f435e1 nmdc:dobj-11-c6dpxq70 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7ek1wx14.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ba158e8cc9a5dfc54732fb0e085fe73 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ba158e8cc9a5dfc54732fb0e085fe73 nmdc:dobj-11-frz65n12 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-7ek1wx14.1/nmdc_wfmgas-11-7ek1wx14.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ba158e8cc9a5dfc54732fb0e085fe73 nmdc:dobj-11-wmcbxh11 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7ek1wx14.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34672ea879a19c766f764451f0b968aa -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34672ea879a19c766f764451f0b968aa nmdc:dobj-11-zd12ea55 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-7ek1wx14.1/nmdc_wfmgas-11-7ek1wx14.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34672ea879a19c766f764451f0b968aa nmdc:dobj-11-2kcjf037 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7ek1wx14.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbed2d55f56430a821587ae24af5d6bb -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbed2d55f56430a821587ae24af5d6bb nmdc:dobj-11-r1bnq931 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-7ek1wx14.1/nmdc_wfmgas-11-7ek1wx14.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbed2d55f56430a821587ae24af5d6bb nmdc:dobj-11-ybvam132 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7ek1wx14.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d664b59e79df6b3e7d8f20019231dc1 -INFO:root:New file path computed for Assembly Coverage BAM: 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+INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfmgas-11-7ek1wx14.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-tr1vzf47 -INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-b2v6rf11.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1 +INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-a2fq7705.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47183e38332a6949e0b723540d3f522b -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47183e38332a6949e0b723540d3f522b nmdc:dobj-11-4xef7y74 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1/nmdc_wfrbt-11-a2fq7705.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47183e38332a6949e0b723540d3f522b nmdc:dobj-11-vnw20p34 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a2fq7705.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b81eca09f6ce1b5b749446b273a92d7 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b81eca09f6ce1b5b749446b273a92d7 nmdc:dobj-11-6zfj6w11 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1/nmdc_wfrbt-11-a2fq7705.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b81eca09f6ce1b5b749446b273a92d7 nmdc:dobj-11-8hv39c09 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a2fq7705.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96ceded2ef09bf9decce3a8486d5599d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96ceded2ef09bf9decce3a8486d5599d nmdc:dobj-11-8gk4me20 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1/nmdc_wfrbt-11-a2fq7705.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96ceded2ef09bf9decce3a8486d5599d nmdc:dobj-11-7wmqyk67 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a2fq7705.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 nmdc:dobj-11-zz148z17 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1/nmdc_wfrbt-11-a2fq7705.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 nmdc:dobj-11-c4vsca10 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a2fq7705.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f73c4622400bb304daaeec954cdd25b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f73c4622400bb304daaeec954cdd25b nmdc:dobj-11-42ykn492 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1/nmdc_wfrbt-11-a2fq7705.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f73c4622400bb304daaeec954cdd25b nmdc:dobj-11-13qx9y05 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a2fq7705.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6324bb32dd9589af0344fd2266d9360 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6324bb32dd9589af0344fd2266d9360 nmdc:dobj-11-q7f3e254 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1/nmdc_wfrbt-11-a2fq7705.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6324bb32dd9589af0344fd2266d9360 nmdc:dobj-11-q3pg3527 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a2fq7705.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b205ef3e409a285e33a2375934cecbec -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b205ef3e409a285e33a2375934cecbec nmdc:dobj-11-ka0n1h72 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1/nmdc_wfrbt-11-a2fq7705.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b205ef3e409a285e33a2375934cecbec nmdc:dobj-11-2bz6x449 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a2fq7705.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a7a236d19019e0d4e21c6f61a7f109b 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path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26d4341d79dc1684a18dfef485301de9 nmdc:dobj-11-ttvf7e40 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-a2fq7705.1/nmdc_wfrbt-11-a2fq7705.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26d4341d79dc1684a18dfef485301de9 nmdc:dobj-11-rcsya406 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfrbt-11-b2v6rf11.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a2fq7705.1_kraken2_krona.html 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3xgx9y44.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea8442421f1738797fb1085314cf67e9 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrqc-11-hcwr4r62.1/nmdc_wfrqc-11-hcwr4r62.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea8442421f1738797fb1085314cf67e9 nmdc:dobj-11-q6aeyg31 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrqc-11-3xgx9y44.1/nmdc_wfrqc-11-3xgx9y44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea8442421f1738797fb1085314cf67e9 nmdc:dobj-11-n3kmeq35 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hcwr4r62.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfrqc-11-hcwr4r62.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3xgx9y44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfrqc-11-3xgx9y44.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-g4095b91 -INFO:root:New activity id created for nmdc:omprc-11-g4095b91 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2nsn2d68.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1 +INFO:root:New activity id created for nmdc:omprc-11-g4095b91 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-e2dx9j82.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-e2dx9j82.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:83e82ee96e83096f8011e524a70c08a2 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83e82ee96e83096f8011e524a70c08a2 nmdc:dobj-11-p7297f74 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-e2dx9j82.1/nmdc_wfmgas-11-e2dx9j82.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83e82ee96e83096f8011e524a70c08a2 nmdc:dobj-11-my20az91 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e2dx9j82.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3b6a61384490607058dbd68e830b19b -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3b6a61384490607058dbd68e830b19b nmdc:dobj-11-736hz597 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-e2dx9j82.1/nmdc_wfmgas-11-e2dx9j82.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3b6a61384490607058dbd68e830b19b nmdc:dobj-11-ah794716 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e2dx9j82.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72ccfd42865316b6cc8c8dc9695f2c19 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72ccfd42865316b6cc8c8dc9695f2c19 nmdc:dobj-11-s4am0j41 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-e2dx9j82.1/nmdc_wfmgas-11-e2dx9j82.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72ccfd42865316b6cc8c8dc9695f2c19 nmdc:dobj-11-0wfjq712 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e2dx9j82.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c4d08b0edc259c2a106606221061f0e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c4d08b0edc259c2a106606221061f0e nmdc:dobj-11-36f3ad12 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-e2dx9j82.1/nmdc_wfmgas-11-e2dx9j82.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c4d08b0edc259c2a106606221061f0e nmdc:dobj-11-n461dg85 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e2dx9j82.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 nmdc:dobj-11-21k5pq67 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-e2dx9j82.1/nmdc_wfmgas-11-e2dx9j82.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 nmdc:dobj-11-ztvj3e65 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfmgas-11-2nsn2d68.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e2dx9j82.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfmgas-11-e2dx9j82.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-g4095b91 -INFO:root:New activity id created for nmdc:omprc-11-g4095b91 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-m6cq5141.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1 +INFO:root:New activity id created for nmdc:omprc-11-g4095b91 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ygfzqe27.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f311a7ff90a56811d195c02739c75b56 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f311a7ff90a56811d195c02739c75b56 nmdc:dobj-11-9hnn5k48 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f311a7ff90a56811d195c02739c75b56 nmdc:dobj-11-2xjecw63 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b913564fdf48c173240c6cb1d43fab57 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b913564fdf48c173240c6cb1d43fab57 nmdc:dobj-11-r0gf7m78 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b913564fdf48c173240c6cb1d43fab57 nmdc:dobj-11-7d7tnx80 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 nmdc:dobj-11-r7277t86 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 nmdc:dobj-11-885cq388 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2089bb738e19acf397b874c7ba1ee213 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2089bb738e19acf397b874c7ba1ee213 nmdc:dobj-11-j16apa48 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2089bb738e19acf397b874c7ba1ee213 nmdc:dobj-11-s364n958 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 nmdc:dobj-11-m4fg0t32 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 nmdc:dobj-11-ff3ecx65 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60adf737df1ff873a4134e0b09abe756 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60adf737df1ff873a4134e0b09abe756 nmdc:dobj-11-k8z4qv66 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60adf737df1ff873a4134e0b09abe756 nmdc:dobj-11-z8t4d618 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4b16136fb23593be83b69ddd5286cbe -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4b16136fb23593be83b69ddd5286cbe nmdc:dobj-11-fnyef341 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4b16136fb23593be83b69ddd5286cbe nmdc:dobj-11-jvvzxx75 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:469261fb4820f3f3ad54d0abadd789a6 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:469261fb4820f3f3ad54d0abadd789a6 nmdc:dobj-11-em75ck24 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:469261fb4820f3f3ad54d0abadd789a6 nmdc:dobj-11-p4rk1123 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ceec1fb674297db511106b4fe435a5a6 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ceec1fb674297db511106b4fe435a5a6 nmdc:dobj-11-jt5w3j77 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ygfzqe27.1/nmdc_wfrbt-11-ygfzqe27.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ceec1fb674297db511106b4fe435a5a6 nmdc:dobj-11-vsnqmk91 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfrbt-11-m6cq5141.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygfzqe27.1_kraken2_krona.html 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nmdc:8b893c6adec9b20905ae26e886f077d7 nmdc:wfrqc-11-x51ysm94.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7d4zgt82.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8b893c6adec9b20905ae26e886f077d7 nmdc:wfrqc-11-7d4zgt82.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5yy9k739 -INFO:root:New activity id created for nmdc:omprc-11-5yy9k739 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x3bsa555.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-x3bsa555.1 +INFO:root:New activity id created for nmdc:omprc-11-5yy9k739 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-79ahds30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-79ahds30.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2809e8e79869a8e41acac3f5b2ad207f -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-x3bsa555.1/nmdc_wfmgas-11-x3bsa555.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2809e8e79869a8e41acac3f5b2ad207f nmdc:dobj-11-p16n8t71 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-79ahds30.1/nmdc_wfmgas-11-79ahds30.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2809e8e79869a8e41acac3f5b2ad207f nmdc:dobj-11-qgh9e683 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3bsa555.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-79ahds30.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6c0e1781197cfa53b82aef7024b3e9ab -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-x3bsa555.1/nmdc_wfmgas-11-x3bsa555.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c417efe47a036338b8a49611337f9db nmdc:dobj-11-4at2k847 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-79ahds30.1/nmdc_wfmgas-11-79ahds30.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c417efe47a036338b8a49611337f9db nmdc:dobj-11-yqwpcd16 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3bsa555.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-79ahds30.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d04492608b77610683e34a7936955948 -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88cb95d5dcac01adf30dac966bae9a55 nmdc:dobj-11-0ezb0j72 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-1n2f6m66.1/nmdc_wfrbt-11-1n2f6m66.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88cb95d5dcac01adf30dac966bae9a55 nmdc:dobj-11-fq9mt441 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1n2f6m66.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:770eea8234443b382b0c39bcd8d054de -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:770eea8234443b382b0c39bcd8d054de nmdc:dobj-11-d67pr204 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-1n2f6m66.1/nmdc_wfrbt-11-1n2f6m66.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:770eea8234443b382b0c39bcd8d054de nmdc:dobj-11-6592rk76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1n2f6m66.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:49919109da7a01549be2212d4a4b8a68 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e43ac2b9303f3360570a906ad041ed7 nmdc:dobj-11-fk1qhp05 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-1n2f6m66.1/nmdc_wfrbt-11-1n2f6m66.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e43ac2b9303f3360570a906ad041ed7 nmdc:dobj-11-t6eq9x08 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1n2f6m66.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 nmdc:dobj-11-n4btmr71 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-1n2f6m66.1/nmdc_wfrbt-11-1n2f6m66.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 nmdc:dobj-11-vxf05f23 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1n2f6m66.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41a235a0bf73ce773fa4181dbb338049 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41a235a0bf73ce773fa4181dbb338049 nmdc:dobj-11-0yppat24 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-1n2f6m66.1/nmdc_wfrbt-11-1n2f6m66.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41a235a0bf73ce773fa4181dbb338049 nmdc:dobj-11-p8kdhe48 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1n2f6m66.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0d619bb56c7393d4e4f55ff535d2647 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0d619bb56c7393d4e4f55ff535d2647 nmdc:dobj-11-5d90zk63 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-1n2f6m66.1/nmdc_wfrbt-11-1n2f6m66.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0d619bb56c7393d4e4f55ff535d2647 nmdc:dobj-11-16hybm79 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1n2f6m66.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:329c66c52b773c8668a4d3b0790c599c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:329c66c52b773c8668a4d3b0790c599c nmdc:dobj-11-1bt52890 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-1n2f6m66.1/nmdc_wfrbt-11-1n2f6m66.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:329c66c52b773c8668a4d3b0790c599c nmdc:dobj-11-y5mc7q38 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1n2f6m66.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b64c8f7063313787ff247ef0262a8aec -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b64c8f7063313787ff247ef0262a8aec nmdc:dobj-11-8ndbjb31 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-1n2f6m66.1/nmdc_wfrbt-11-1n2f6m66.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b64c8f7063313787ff247ef0262a8aec nmdc:dobj-11-pqeh1y57 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8b893c6adec9b20905ae26e886f077d7 nmdc:wfrbt-11-j2kqyn56.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1n2f6m66.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8b893c6adec9b20905ae26e886f077d7 nmdc:wfrbt-11-1n2f6m66.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5yy9k739 INFO:root:omics_processing_id: nmdc:omprc-11-2d16h818 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72779f8c6bba0a95693c89a92f4f6be3 nmdc:dobj-11-9h146810 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72779f8c6bba0a95693c89a92f4f6be3 nmdc:dobj-11-8h6jrf40 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-2d16h818 -INFO:root:New activity id created for nmdc:omprc-11-2d16h818 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fajeac44.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfrqc-11-fajeac44.1 +INFO:root:New activity id created for nmdc:omprc-11-2d16h818 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-bbc6ch88.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bbc6ch88.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47619b9fb6a7465e25999a80826badac -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfrqc-11-fajeac44.1/nmdc_wfrqc-11-fajeac44.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47619b9fb6a7465e25999a80826badac nmdc:dobj-11-kh0rey16 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfrqc-11-bbc6ch88.1/nmdc_wfrqc-11-bbc6ch88.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47619b9fb6a7465e25999a80826badac nmdc:dobj-11-3xk69n79 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-2d16h818 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fajeac44.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:761f287faac154a3b66a0c89c82738d4 nmdc:wfrqc-11-fajeac44.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bbc6ch88.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:761f287faac154a3b66a0c89c82738d4 nmdc:wfrqc-11-bbc6ch88.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-2d16h818 -INFO:root:New activity id created for nmdc:omprc-11-2d16h818 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-q1e85944.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1 +INFO:root:New activity id created for nmdc:omprc-11-2d16h818 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4xt4w481.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-4xt4w481.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:231f54f3e5e77afa18423c42fcc3857d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1/nmdc_wfmgas-11-q1e85944.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:231f54f3e5e77afa18423c42fcc3857d nmdc:dobj-11-9aarqk82 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-4xt4w481.1/nmdc_wfmgas-11-4xt4w481.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:231f54f3e5e77afa18423c42fcc3857d nmdc:dobj-11-7ctr5m04 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-2d16h818 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q1e85944.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xt4w481.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56e60e4a5424e7d07b1dba85b8013a04 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1/nmdc_wfmgas-11-q1e85944.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56e60e4a5424e7d07b1dba85b8013a04 nmdc:dobj-11-1ydtah87 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-4xt4w481.1/nmdc_wfmgas-11-4xt4w481.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56e60e4a5424e7d07b1dba85b8013a04 nmdc:dobj-11-a0eyb624 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-2d16h818 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q1e85944.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xt4w481.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c823f4d6dac3f35df41448f2de60e69 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1/nmdc_wfmgas-11-q1e85944.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c823f4d6dac3f35df41448f2de60e69 nmdc:dobj-11-gys0e436 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-4xt4w481.1/nmdc_wfmgas-11-4xt4w481.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c823f4d6dac3f35df41448f2de60e69 nmdc:dobj-11-zdtymy16 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-2d16h818 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q1e85944.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xt4w481.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90f5744d23efa69f005b0cb8377127b1 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1/nmdc_wfmgas-11-q1e85944.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90f5744d23efa69f005b0cb8377127b1 nmdc:dobj-11-as007h52 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-4xt4w481.1/nmdc_wfmgas-11-4xt4w481.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90f5744d23efa69f005b0cb8377127b1 nmdc:dobj-11-y13xm982 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-2d16h818 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q1e85944.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xt4w481.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:81e045c32f418f2b5a62e22902e60a6f -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1/nmdc_wfmgas-11-q1e85944.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81e045c32f418f2b5a62e22902e60a6f nmdc:dobj-11-6gjfta33 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-4xt4w481.1/nmdc_wfmgas-11-4xt4w481.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81e045c32f418f2b5a62e22902e60a6f nmdc:dobj-11-j3y3ky51 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-2d16h818 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q1e85944.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:761f287faac154a3b66a0c89c82738d4 nmdc:wfmgas-11-q1e85944.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xt4w481.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:761f287faac154a3b66a0c89c82738d4 nmdc:wfmgas-11-4xt4w481.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-2d16h818 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-2d16h818 INFO:root:omics_processing_id: nmdc:omprc-11-85jsxt33 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f65059f9df59fe318f2780fc2e0605d nmdc:dobj-11-ffd3te21 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f65059f9df59fe318f2780fc2e0605d nmdc:dobj-11-rg4yw285 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-85jsxt33 -INFO:root:New activity id created for nmdc:omprc-11-85jsxt33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fj1qkn28.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfrqc-11-fj1qkn28.1 +INFO:root:New activity id created for nmdc:omprc-11-85jsxt33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-17c68f05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfrqc-11-17c68f05.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ca80874470cd418dce76a684ca9e7d8 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfrqc-11-fj1qkn28.1/nmdc_wfrqc-11-fj1qkn28.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ca80874470cd418dce76a684ca9e7d8 nmdc:dobj-11-e1e1dh41 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfrqc-11-17c68f05.1/nmdc_wfrqc-11-17c68f05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ca80874470cd418dce76a684ca9e7d8 nmdc:dobj-11-r0jt2q39 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-85jsxt33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fj1qkn28.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-17c68f05.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e9f01140cda71a4be6fbb9fba896d38 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfrqc-11-fj1qkn28.1/nmdc_wfrqc-11-fj1qkn28.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e9f01140cda71a4be6fbb9fba896d38 nmdc:dobj-11-yme9yr47 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfrqc-11-17c68f05.1/nmdc_wfrqc-11-17c68f05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e9f01140cda71a4be6fbb9fba896d38 nmdc:dobj-11-vn9zkb85 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-85jsxt33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fj1qkn28.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8253bcdcd0387177ff895c38a047c719 nmdc:wfrqc-11-fj1qkn28.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-17c68f05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8253bcdcd0387177ff895c38a047c719 nmdc:wfrqc-11-17c68f05.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-85jsxt33 -INFO:root:New activity id created for nmdc:omprc-11-85jsxt33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-t1rq2j82.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1 +INFO:root:New activity id created for nmdc:omprc-11-85jsxt33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4nnzgf95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-4nnzgf95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9fd9e4c2052840e335bf4dd7dc1a836c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1/nmdc_wfmgas-11-t1rq2j82.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9fd9e4c2052840e335bf4dd7dc1a836c nmdc:dobj-11-gv851495 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-4nnzgf95.1/nmdc_wfmgas-11-4nnzgf95.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9fd9e4c2052840e335bf4dd7dc1a836c nmdc:dobj-11-ecwyry44 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-85jsxt33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t1rq2j82.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4nnzgf95.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e50cf5553a7a06a03424a5123ba0dabc -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1/nmdc_wfmgas-11-t1rq2j82.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e50cf5553a7a06a03424a5123ba0dabc nmdc:dobj-11-d56jgr57 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-4nnzgf95.1/nmdc_wfmgas-11-4nnzgf95.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e50cf5553a7a06a03424a5123ba0dabc nmdc:dobj-11-2d7zq008 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-85jsxt33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t1rq2j82.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4nnzgf95.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f20a2e7cc9051159641ca5147fc7382 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1/nmdc_wfmgas-11-t1rq2j82.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f20a2e7cc9051159641ca5147fc7382 nmdc:dobj-11-4xecsa56 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-4nnzgf95.1/nmdc_wfmgas-11-4nnzgf95.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f20a2e7cc9051159641ca5147fc7382 nmdc:dobj-11-bhs7sg51 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-85jsxt33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t1rq2j82.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4nnzgf95.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c72608f8b3bd84bf80868d30e02aab72 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1/nmdc_wfmgas-11-t1rq2j82.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c72608f8b3bd84bf80868d30e02aab72 nmdc:dobj-11-czy0p769 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-4nnzgf95.1/nmdc_wfmgas-11-4nnzgf95.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c72608f8b3bd84bf80868d30e02aab72 nmdc:dobj-11-qhb45m15 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-85jsxt33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t1rq2j82.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4nnzgf95.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c7f00ab9890b52eadf20c168496f65e -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1/nmdc_wfmgas-11-t1rq2j82.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c7f00ab9890b52eadf20c168496f65e nmdc:dobj-11-ph36g585 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-4nnzgf95.1/nmdc_wfmgas-11-4nnzgf95.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c7f00ab9890b52eadf20c168496f65e nmdc:dobj-11-0204vg72 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-85jsxt33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t1rq2j82.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:8253bcdcd0387177ff895c38a047c719 nmdc:wfmgas-11-t1rq2j82.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4nnzgf95.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:8253bcdcd0387177ff895c38a047c719 nmdc:wfmgas-11-4nnzgf95.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-85jsxt33 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-85jsxt33 INFO:root:omics_processing_id: nmdc:omprc-11-d6c4q479 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65b806917315e7518fdd36887bca0190 nmdc:dobj-11-de5mf655 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65b806917315e7518fdd36887bca0190 nmdc:dobj-11-1xpq3c18 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-d6c4q479 -INFO:root:New activity id created for nmdc:omprc-11-d6c4q479 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-wbbb8149.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfrqc-11-wbbb8149.1 +INFO:root:New activity id created for nmdc:omprc-11-d6c4q479 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-v54kqe05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfrqc-11-v54kqe05.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9333de207aace2cea9ea955e88bdec9b -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfrqc-11-wbbb8149.1/nmdc_wfrqc-11-wbbb8149.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9333de207aace2cea9ea955e88bdec9b nmdc:dobj-11-3ztayr76 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfrqc-11-v54kqe05.1/nmdc_wfrqc-11-v54kqe05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9333de207aace2cea9ea955e88bdec9b nmdc:dobj-11-6mt9n517 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-d6c4q479 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wbbb8149.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-v54kqe05.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d75540d565682d791dc45298f9de54fc -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfrqc-11-wbbb8149.1/nmdc_wfrqc-11-wbbb8149.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d75540d565682d791dc45298f9de54fc nmdc:dobj-11-7vgahw92 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfrqc-11-v54kqe05.1/nmdc_wfrqc-11-v54kqe05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d75540d565682d791dc45298f9de54fc nmdc:dobj-11-xyc1qd08 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-d6c4q479 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wbbb8149.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:7a197d54a06a37090bb50eaf37c93115 nmdc:wfrqc-11-wbbb8149.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-v54kqe05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:7a197d54a06a37090bb50eaf37c93115 nmdc:wfrqc-11-v54kqe05.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-d6c4q479 -INFO:root:New activity id created for nmdc:omprc-11-d6c4q479 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0zymhj17.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1 +INFO:root:New activity id created for nmdc:omprc-11-d6c4q479 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-536tzf52.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-536tzf52.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5352457da0e9bb72bf0ae6088939908d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1/nmdc_wfmgas-11-0zymhj17.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5352457da0e9bb72bf0ae6088939908d nmdc:dobj-11-kbxnpw56 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-536tzf52.1/nmdc_wfmgas-11-536tzf52.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5352457da0e9bb72bf0ae6088939908d nmdc:dobj-11-8twbp982 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-d6c4q479 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0zymhj17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-536tzf52.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58c1cb4a44fddf66e9805298fa4b53e2 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1/nmdc_wfmgas-11-0zymhj17.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58c1cb4a44fddf66e9805298fa4b53e2 nmdc:dobj-11-5e6v2m36 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-536tzf52.1/nmdc_wfmgas-11-536tzf52.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58c1cb4a44fddf66e9805298fa4b53e2 nmdc:dobj-11-xpws0e12 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-d6c4q479 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0zymhj17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-536tzf52.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c770451eda4fa76c8f06e4eac0cb5800 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1/nmdc_wfmgas-11-0zymhj17.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c770451eda4fa76c8f06e4eac0cb5800 nmdc:dobj-11-yqdyz393 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-536tzf52.1/nmdc_wfmgas-11-536tzf52.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c770451eda4fa76c8f06e4eac0cb5800 nmdc:dobj-11-1dccaa09 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-d6c4q479 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0zymhj17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-536tzf52.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:165d07a310f116f21e4a3cb1d2f9001e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1/nmdc_wfmgas-11-0zymhj17.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:165d07a310f116f21e4a3cb1d2f9001e nmdc:dobj-11-hjtkse28 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-536tzf52.1/nmdc_wfmgas-11-536tzf52.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:165d07a310f116f21e4a3cb1d2f9001e nmdc:dobj-11-bkd3wf21 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-d6c4q479 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0zymhj17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-536tzf52.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eeaca1069da3f994467936972ebc4a79 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1/nmdc_wfmgas-11-0zymhj17.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eeaca1069da3f994467936972ebc4a79 nmdc:dobj-11-xx1bqf37 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-536tzf52.1/nmdc_wfmgas-11-536tzf52.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eeaca1069da3f994467936972ebc4a79 nmdc:dobj-11-rnb3pg43 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-d6c4q479 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0zymhj17.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:7a197d54a06a37090bb50eaf37c93115 nmdc:wfmgas-11-0zymhj17.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-536tzf52.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:7a197d54a06a37090bb50eaf37c93115 nmdc:wfmgas-11-536tzf52.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-d6c4q479 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-d6c4q479 INFO:root:omics_processing_id: nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a198c6e6ba43f210857ca41f25e0ed10 nmdc:dobj-11-5wr25989 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a198c6e6ba43f210857ca41f25e0ed10 nmdc:dobj-11-3920nm23 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-keywj942 -INFO:root:New activity id created for nmdc:omprc-11-keywj942 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cq3ss743.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrqc-11-cq3ss743.1 +INFO:root:New activity id created for nmdc:omprc-11-keywj942 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-tzpdxp02.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrqc-11-tzpdxp02.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f5c7328eecd18d4989fb101e8d1188a -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrqc-11-cq3ss743.1/nmdc_wfrqc-11-cq3ss743.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f5c7328eecd18d4989fb101e8d1188a nmdc:dobj-11-yezf6r77 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrqc-11-tzpdxp02.1/nmdc_wfrqc-11-tzpdxp02.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f5c7328eecd18d4989fb101e8d1188a nmdc:dobj-11-ky1d3b15 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cq3ss743.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tzpdxp02.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b28549eff41c93c582b5e3c86ffb722 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrqc-11-cq3ss743.1/nmdc_wfrqc-11-cq3ss743.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b28549eff41c93c582b5e3c86ffb722 nmdc:dobj-11-m5ezba14 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrqc-11-tzpdxp02.1/nmdc_wfrqc-11-tzpdxp02.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b28549eff41c93c582b5e3c86ffb722 nmdc:dobj-11-dmmkmd30 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cq3ss743.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:f418c728a009dc1de4528dc5b990e405 nmdc:wfrqc-11-cq3ss743.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tzpdxp02.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:f418c728a009dc1de4528dc5b990e405 nmdc:wfrqc-11-tzpdxp02.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-keywj942 -INFO:root:New activity id created for nmdc:omprc-11-keywj942 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-v1q30a95.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-v1q30a95.1 +INFO:root:New activity id created for nmdc:omprc-11-keywj942 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yc2c9660.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-yc2c9660.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ce78f79a3d3b02bb500ff0d58e124cda -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-v1q30a95.1/nmdc_wfmgas-11-v1q30a95.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce78f79a3d3b02bb500ff0d58e124cda nmdc:dobj-11-7rv2r284 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-yc2c9660.1/nmdc_wfmgas-11-yc2c9660.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce78f79a3d3b02bb500ff0d58e124cda nmdc:dobj-11-dsjwey63 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v1q30a95.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc2c9660.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18a7268d072a2d6a817f40573167bbac -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-v1q30a95.1/nmdc_wfmgas-11-v1q30a95.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18a7268d072a2d6a817f40573167bbac nmdc:dobj-11-fh8f9v43 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-yc2c9660.1/nmdc_wfmgas-11-yc2c9660.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18a7268d072a2d6a817f40573167bbac nmdc:dobj-11-wckjc403 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v1q30a95.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc2c9660.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2154ce589183eb8a7b4d32a2647772e8 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-v1q30a95.1/nmdc_wfmgas-11-v1q30a95.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2154ce589183eb8a7b4d32a2647772e8 nmdc:dobj-11-3n9wqz80 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-yc2c9660.1/nmdc_wfmgas-11-yc2c9660.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2154ce589183eb8a7b4d32a2647772e8 nmdc:dobj-11-a2fjyv02 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v1q30a95.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc2c9660.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0cbbb5775ed6286652ceae5351c2cf9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-v1q30a95.1/nmdc_wfmgas-11-v1q30a95.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0cbbb5775ed6286652ceae5351c2cf9 nmdc:dobj-11-51q0cf58 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-yc2c9660.1/nmdc_wfmgas-11-yc2c9660.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0cbbb5775ed6286652ceae5351c2cf9 nmdc:dobj-11-qrtd3q06 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v1q30a95.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc2c9660.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:474a282db436e36825592becc05c375b -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-v1q30a95.1/nmdc_wfmgas-11-v1q30a95.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:474a282db436e36825592becc05c375b nmdc:dobj-11-0ee33313 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfmgas-11-yc2c9660.1/nmdc_wfmgas-11-yc2c9660.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:474a282db436e36825592becc05c375b nmdc:dobj-11-ydmfn364 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v1q30a95.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:f418c728a009dc1de4528dc5b990e405 nmdc:wfmgas-11-v1q30a95.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc2c9660.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:f418c728a009dc1de4528dc5b990e405 nmdc:wfmgas-11-yc2c9660.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-keywj942 -INFO:root:New activity id created for nmdc:omprc-11-keywj942 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-mnb6c929.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1 +INFO:root:New activity id created for nmdc:omprc-11-keywj942 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-x5ztfg36.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fe35f89a855453d3f6c7a3429e35d02 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fe35f89a855453d3f6c7a3429e35d02 nmdc:dobj-11-30tmse09 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fe35f89a855453d3f6c7a3429e35d02 nmdc:dobj-11-k163mr77 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ae79531a0268d93cb8251e3397609a3 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ae79531a0268d93cb8251e3397609a3 nmdc:dobj-11-vcj1d867 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ae79531a0268d93cb8251e3397609a3 nmdc:dobj-11-efbrqj79 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8501f826e986b8c96cfa0f1fc3b95664 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8501f826e986b8c96cfa0f1fc3b95664 nmdc:dobj-11-yhyts024 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8501f826e986b8c96cfa0f1fc3b95664 nmdc:dobj-11-b60s2373 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6eddef8b7922a4ee66e1c929e662fb44 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6eddef8b7922a4ee66e1c929e662fb44 nmdc:dobj-11-cem1ev90 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6eddef8b7922a4ee66e1c929e662fb44 nmdc:dobj-11-zft0qm23 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd13ac21b6f0a108144db9d5e73dce51 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd13ac21b6f0a108144db9d5e73dce51 nmdc:dobj-11-933tdz42 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd13ac21b6f0a108144db9d5e73dce51 nmdc:dobj-11-njdfcc88 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:777ba469c171b72a370b3574aa51698b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:777ba469c171b72a370b3574aa51698b nmdc:dobj-11-4j1d7j27 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:777ba469c171b72a370b3574aa51698b nmdc:dobj-11-4ybc3f33 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9139fb2f1cafb0e7a29de83443d89df6 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9139fb2f1cafb0e7a29de83443d89df6 nmdc:dobj-11-jnsvp997 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9139fb2f1cafb0e7a29de83443d89df6 nmdc:dobj-11-a38kk096 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd42771008a5df5cacdc5cbe3cb296d6 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd42771008a5df5cacdc5cbe3cb296d6 nmdc:dobj-11-ez4xgh54 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd42771008a5df5cacdc5cbe3cb296d6 nmdc:dobj-11-7c6ks493 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7c470106d10e95c1834c089f94607bed -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c470106d10e95c1834c089f94607bed nmdc:dobj-11-fdvty722 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-x5ztfg36.1/nmdc_wfrbt-11-x5ztfg36.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c470106d10e95c1834c089f94607bed nmdc:dobj-11-naz9rt12 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f418c728a009dc1de4528dc5b990e405 nmdc:wfrbt-11-mnb6c929.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x5ztfg36.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f418c728a009dc1de4528dc5b990e405 nmdc:wfrbt-11-x5ztfg36.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-keywj942 INFO:root:omics_processing_id: nmdc:omprc-11-bzxddj92 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38116da337f1e868ba6fec5a184ba2fc nmdc:dobj-11-k0hf9a37 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38116da337f1e868ba6fec5a184ba2fc nmdc:dobj-11-sgxfd370 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-bzxddj92 -INFO:root:New activity id created for nmdc:omprc-11-bzxddj92 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fnpccc97.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-fnpccc97.1 +INFO:root:New activity id created for nmdc:omprc-11-bzxddj92 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ygd59c49.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-ygd59c49.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f69990b0ca36244479b8e2cf5059a2b -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-fnpccc97.1/nmdc_wfrqc-11-fnpccc97.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f69990b0ca36244479b8e2cf5059a2b nmdc:dobj-11-407m8372 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-ygd59c49.1/nmdc_wfrqc-11-ygd59c49.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f69990b0ca36244479b8e2cf5059a2b nmdc:dobj-11-fwd88h17 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-bzxddj92 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fnpccc97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ygd59c49.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6de02a2206630c8fa68f47f67235c3ce -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-fnpccc97.1/nmdc_wfrqc-11-fnpccc97.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6de02a2206630c8fa68f47f67235c3ce nmdc:dobj-11-5xgms068 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-ygd59c49.1/nmdc_wfrqc-11-ygd59c49.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6de02a2206630c8fa68f47f67235c3ce nmdc:dobj-11-v19zx779 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-bzxddj92 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fnpccc97.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:5ab2faba70b7dc9853cecf68af4576c8 nmdc:wfrqc-11-fnpccc97.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ygd59c49.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:5ab2faba70b7dc9853cecf68af4576c8 nmdc:wfrqc-11-ygd59c49.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-bzxddj92 -INFO:root:New activity id created for nmdc:omprc-11-bzxddj92 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-9k19zq17.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1 +INFO:root:New activity id created for nmdc:omprc-11-bzxddj92 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qtf4yj03.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-qtf4yj03.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:422bde67781e860175c83611a11d317a -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:422bde67781e860175c83611a11d317a nmdc:dobj-11-vkz89g63 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-qtf4yj03.1/nmdc_wfmgas-11-qtf4yj03.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:422bde67781e860175c83611a11d317a nmdc:dobj-11-bwhm7y68 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-bzxddj92 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qtf4yj03.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:011a494743bdca4d60822bd753d267da -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:011a494743bdca4d60822bd753d267da nmdc:dobj-11-evcp9d48 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-qtf4yj03.1/nmdc_wfmgas-11-qtf4yj03.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:011a494743bdca4d60822bd753d267da nmdc:dobj-11-c5dtky88 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-bzxddj92 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qtf4yj03.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0d11b4879140511f9145b1ff462a7c81 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d11b4879140511f9145b1ff462a7c81 nmdc:dobj-11-s295vy19 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-qtf4yj03.1/nmdc_wfmgas-11-qtf4yj03.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d11b4879140511f9145b1ff462a7c81 nmdc:dobj-11-vrc57b28 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-bzxddj92 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qtf4yj03.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd08b76d94a1499d6dccd314d7564fcb -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd08b76d94a1499d6dccd314d7564fcb nmdc:dobj-11-6ch74579 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-qtf4yj03.1/nmdc_wfmgas-11-qtf4yj03.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd08b76d94a1499d6dccd314d7564fcb nmdc:dobj-11-pqfgkd51 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-bzxddj92 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qtf4yj03.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:824e98c7b6dd7cfb5b35d2c37b7fb0be -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:824e98c7b6dd7cfb5b35d2c37b7fb0be nmdc:dobj-11-39y7cs86 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-qtf4yj03.1/nmdc_wfmgas-11-qtf4yj03.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:824e98c7b6dd7cfb5b35d2c37b7fb0be nmdc:dobj-11-1sskby78 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-bzxddj92 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:5ab2faba70b7dc9853cecf68af4576c8 nmdc:wfmgas-11-9k19zq17.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qtf4yj03.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:5ab2faba70b7dc9853cecf68af4576c8 nmdc:wfmgas-11-qtf4yj03.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-bzxddj92 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-bzxddj92 INFO:root:omics_processing_id: nmdc:omprc-11-4ptjh074 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f098da7fe12707ec59757cd2dfb94d26 nmdc:dobj-11-864m2896 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f098da7fe12707ec59757cd2dfb94d26 nmdc:dobj-11-vyej1762 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-4ptjh074 -INFO:root:New activity id created for nmdc:omprc-11-4ptjh074 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-bbkdsq06.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-bbkdsq06.1 +INFO:root:New activity id created for nmdc:omprc-11-4ptjh074 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4xd8m869.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-4xd8m869.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42505d3bc1abb992c5839e8994cc6c86 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-bbkdsq06.1/nmdc_wfrqc-11-bbkdsq06.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42505d3bc1abb992c5839e8994cc6c86 nmdc:dobj-11-12bnjm31 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-4xd8m869.1/nmdc_wfrqc-11-4xd8m869.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42505d3bc1abb992c5839e8994cc6c86 nmdc:dobj-11-qd6w6p95 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-4ptjh074 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bbkdsq06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4xd8m869.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d2bcfe348cd5fd0ea0823f52328fe2f6 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-bbkdsq06.1/nmdc_wfrqc-11-bbkdsq06.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2bcfe348cd5fd0ea0823f52328fe2f6 nmdc:dobj-11-bgqyrh14 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-4xd8m869.1/nmdc_wfrqc-11-4xd8m869.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2bcfe348cd5fd0ea0823f52328fe2f6 nmdc:dobj-11-5yb36769 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4ptjh074 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bbkdsq06.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3bbc2e110acd6e6b200fd43814337b94 nmdc:wfrqc-11-bbkdsq06.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4xd8m869.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3bbc2e110acd6e6b200fd43814337b94 nmdc:wfrqc-11-4xd8m869.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-4ptjh074 -INFO:root:New activity id created for nmdc:omprc-11-4ptjh074 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8xnkq807.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1 +INFO:root:New activity id created for nmdc:omprc-11-4ptjh074 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hf5c0t21.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-hf5c0t21.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ddc6c7a31223f8a9ca4789411e350531 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1/nmdc_wfmgas-11-8xnkq807.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ddc6c7a31223f8a9ca4789411e350531 nmdc:dobj-11-ect18g04 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-hf5c0t21.1/nmdc_wfmgas-11-hf5c0t21.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ddc6c7a31223f8a9ca4789411e350531 nmdc:dobj-11-rey0bc33 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-4ptjh074 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8xnkq807.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hf5c0t21.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ec1e0396d5c08d1e050c1652d784f90 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1/nmdc_wfmgas-11-8xnkq807.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ec1e0396d5c08d1e050c1652d784f90 nmdc:dobj-11-v3wfwq23 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-hf5c0t21.1/nmdc_wfmgas-11-hf5c0t21.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ec1e0396d5c08d1e050c1652d784f90 nmdc:dobj-11-80bkky16 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-4ptjh074 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8xnkq807.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hf5c0t21.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c7b5026a6eec96bfca8952bc4b5428d -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1/nmdc_wfmgas-11-8xnkq807.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c7b5026a6eec96bfca8952bc4b5428d nmdc:dobj-11-8dsr7z04 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-hf5c0t21.1/nmdc_wfmgas-11-hf5c0t21.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c7b5026a6eec96bfca8952bc4b5428d nmdc:dobj-11-g621p927 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-4ptjh074 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8xnkq807.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hf5c0t21.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:958b6797d29ca57deaf65e887b454cb5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1/nmdc_wfmgas-11-8xnkq807.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:958b6797d29ca57deaf65e887b454cb5 nmdc:dobj-11-hqqtyg96 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-hf5c0t21.1/nmdc_wfmgas-11-hf5c0t21.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:958b6797d29ca57deaf65e887b454cb5 nmdc:dobj-11-sx4yr829 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-4ptjh074 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8xnkq807.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hf5c0t21.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f2f329016e730437180ba6eab7235a84 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1/nmdc_wfmgas-11-8xnkq807.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2f329016e730437180ba6eab7235a84 nmdc:dobj-11-z4r7gw15 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-hf5c0t21.1/nmdc_wfmgas-11-hf5c0t21.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2f329016e730437180ba6eab7235a84 nmdc:dobj-11-msd0pm44 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-4ptjh074 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8xnkq807.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3bbc2e110acd6e6b200fd43814337b94 nmdc:wfmgas-11-8xnkq807.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hf5c0t21.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3bbc2e110acd6e6b200fd43814337b94 nmdc:wfmgas-11-hf5c0t21.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-4ptjh074 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-4ptjh074 INFO:root:omics_processing_id: nmdc:omprc-11-b2wgvw58 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19edfbb924938737398f443c7342d913 nmdc:dobj-11-2yzp7791 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19edfbb924938737398f443c7342d913 nmdc:dobj-11-crxsq090 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-b2wgvw58 -INFO:root:New activity id created for nmdc:omprc-11-b2wgvw58 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9h7kh461.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-9h7kh461.1 +INFO:root:New activity id created for nmdc:omprc-11-b2wgvw58 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-47d6f420.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-47d6f420.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d545791b4aabe329934d489074e8355a -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-9h7kh461.1/nmdc_wfrqc-11-9h7kh461.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d545791b4aabe329934d489074e8355a nmdc:dobj-11-5mphw073 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-47d6f420.1/nmdc_wfrqc-11-47d6f420.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d545791b4aabe329934d489074e8355a nmdc:dobj-11-y3j2ne75 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b2wgvw58 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9h7kh461.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-47d6f420.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98efa2073a9a68e46fbba39c166f55f3 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-9h7kh461.1/nmdc_wfrqc-11-9h7kh461.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98efa2073a9a68e46fbba39c166f55f3 nmdc:dobj-11-xce7y969 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-47d6f420.1/nmdc_wfrqc-11-47d6f420.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98efa2073a9a68e46fbba39c166f55f3 nmdc:dobj-11-vgxd6c81 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b2wgvw58 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9h7kh461.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3c401e2ee440df4d96027e3594618104 nmdc:wfrqc-11-9h7kh461.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-47d6f420.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3c401e2ee440df4d96027e3594618104 nmdc:wfrqc-11-47d6f420.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-b2wgvw58 -INFO:root:New activity id created for nmdc:omprc-11-b2wgvw58 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-39g5yk78.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1 +INFO:root:New activity id created for nmdc:omprc-11-b2wgvw58 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7g4dfm51.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-7g4dfm51.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b67bbda2f0dbbeee56f90d9360b615c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b67bbda2f0dbbeee56f90d9360b615c nmdc:dobj-11-akm5a581 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-7g4dfm51.1/nmdc_wfmgas-11-7g4dfm51.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b67bbda2f0dbbeee56f90d9360b615c nmdc:dobj-11-jzczrf06 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-b2wgvw58 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7g4dfm51.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e46c30d89c3d8fbf7007e1dd144e070 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e46c30d89c3d8fbf7007e1dd144e070 nmdc:dobj-11-ry8cwk04 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-7g4dfm51.1/nmdc_wfmgas-11-7g4dfm51.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e46c30d89c3d8fbf7007e1dd144e070 nmdc:dobj-11-fhtb0k29 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-b2wgvw58 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7g4dfm51.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:efd90d7b508360c3c0e4067cf039f15f -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efd90d7b508360c3c0e4067cf039f15f nmdc:dobj-11-3nfewy61 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-7g4dfm51.1/nmdc_wfmgas-11-7g4dfm51.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efd90d7b508360c3c0e4067cf039f15f nmdc:dobj-11-cnprqc86 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b2wgvw58 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7g4dfm51.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5fd489af1a69328b86c2d5b1d42ffe57 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fd489af1a69328b86c2d5b1d42ffe57 nmdc:dobj-11-7fh6e509 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-7g4dfm51.1/nmdc_wfmgas-11-7g4dfm51.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fd489af1a69328b86c2d5b1d42ffe57 nmdc:dobj-11-dnyq0k60 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-b2wgvw58 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7g4dfm51.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f778360d55e8fb9c7a0d8c3a1ab51632 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f778360d55e8fb9c7a0d8c3a1ab51632 nmdc:dobj-11-tfkhq219 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-7g4dfm51.1/nmdc_wfmgas-11-7g4dfm51.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f778360d55e8fb9c7a0d8c3a1ab51632 nmdc:dobj-11-rxyrgk30 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-b2wgvw58 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3c401e2ee440df4d96027e3594618104 nmdc:wfmgas-11-39g5yk78.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7g4dfm51.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3c401e2ee440df4d96027e3594618104 nmdc:wfmgas-11-7g4dfm51.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-b2wgvw58 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-b2wgvw58 INFO:root:omics_processing_id: nmdc:omprc-11-0yxa3962 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ab91c737308518038e6e4c0925bd12f nmdc:dobj-11-0re6ks73 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ab91c737308518038e6e4c0925bd12f nmdc:dobj-11-rk7j1j25 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0yxa3962 -INFO:root:New activity id created for nmdc:omprc-11-0yxa3962 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-z819et30.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-z819et30.1 +INFO:root:New activity id created for nmdc:omprc-11-0yxa3962 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-1bzhq983.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-1bzhq983.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92146e7696d17b02f330767b56bc0b1b -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-z819et30.1/nmdc_wfrqc-11-z819et30.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92146e7696d17b02f330767b56bc0b1b nmdc:dobj-11-7n1ygb80 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-1bzhq983.1/nmdc_wfrqc-11-1bzhq983.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92146e7696d17b02f330767b56bc0b1b nmdc:dobj-11-rphhb737 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0yxa3962 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z819et30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1bzhq983.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c7df8dfccd30a45c2d7451ec028cfe4e -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-z819et30.1/nmdc_wfrqc-11-z819et30.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7df8dfccd30a45c2d7451ec028cfe4e nmdc:dobj-11-hph9t163 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-1bzhq983.1/nmdc_wfrqc-11-1bzhq983.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7df8dfccd30a45c2d7451ec028cfe4e nmdc:dobj-11-aqyb0f22 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0yxa3962 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z819et30.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4cbc930855e87f6cc3f2255b875ccade nmdc:wfrqc-11-z819et30.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1bzhq983.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4cbc930855e87f6cc3f2255b875ccade nmdc:wfrqc-11-1bzhq983.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-0yxa3962 -INFO:root:New activity id created for nmdc:omprc-11-0yxa3962 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ctc4s018.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1 +INFO:root:New activity id created for nmdc:omprc-11-0yxa3962 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4qdtmx11.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-4qdtmx11.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a70203a1dd351901ca8661108d133f35 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a70203a1dd351901ca8661108d133f35 nmdc:dobj-11-vf1wwm35 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-4qdtmx11.1/nmdc_wfmgas-11-4qdtmx11.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a70203a1dd351901ca8661108d133f35 nmdc:dobj-11-ndzt1h21 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-0yxa3962 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4qdtmx11.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5247fbeae0759423c738b888ec0e7645 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5247fbeae0759423c738b888ec0e7645 nmdc:dobj-11-wn8crf04 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-4qdtmx11.1/nmdc_wfmgas-11-4qdtmx11.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5247fbeae0759423c738b888ec0e7645 nmdc:dobj-11-p3238194 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-0yxa3962 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4qdtmx11.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ece40f6ad4cba50944ba432ed580ccbe -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ece40f6ad4cba50944ba432ed580ccbe nmdc:dobj-11-08yjkb02 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-4qdtmx11.1/nmdc_wfmgas-11-4qdtmx11.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ece40f6ad4cba50944ba432ed580ccbe nmdc:dobj-11-478d7z79 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-0yxa3962 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4qdtmx11.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a0ad7bf52dbaf125c49bdb6aacb34ad -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a0ad7bf52dbaf125c49bdb6aacb34ad nmdc:dobj-11-ytj91586 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-4qdtmx11.1/nmdc_wfmgas-11-4qdtmx11.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a0ad7bf52dbaf125c49bdb6aacb34ad nmdc:dobj-11-46v2d870 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-0yxa3962 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4qdtmx11.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23180c63164c4420719172addb6fe325 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23180c63164c4420719172addb6fe325 nmdc:dobj-11-45rw5192 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-4qdtmx11.1/nmdc_wfmgas-11-4qdtmx11.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23180c63164c4420719172addb6fe325 nmdc:dobj-11-rxs83q96 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-0yxa3962 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4cbc930855e87f6cc3f2255b875ccade nmdc:wfmgas-11-ctc4s018.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4qdtmx11.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4cbc930855e87f6cc3f2255b875ccade nmdc:wfmgas-11-4qdtmx11.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-0yxa3962 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-0yxa3962 INFO:root:omics_processing_id: nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:300109666a890c83f10c431a6245561a nmdc:dobj-11-wx4qpj82 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:300109666a890c83f10c431a6245561a nmdc:dobj-11-kyfhgx82 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a0bq3b03 -INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gmnv5v10.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-gmnv5v10.1 +INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-jy5g1e19.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-jy5g1e19.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b8ac90292b803e8882c8aa601233c1e -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-gmnv5v10.1/nmdc_wfrqc-11-gmnv5v10.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b8ac90292b803e8882c8aa601233c1e nmdc:dobj-11-6ya5s707 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-jy5g1e19.1/nmdc_wfrqc-11-jy5g1e19.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject 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INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gmnv5v10.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfrqc-11-gmnv5v10.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jy5g1e19.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfrqc-11-jy5g1e19.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-a0bq3b03 -INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-p9h7fy68.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1 +INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qjz24t24.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-qjz24t24.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65c2509060ad834fdd85acb62acf817c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1/nmdc_wfmgas-11-p9h7fy68.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65c2509060ad834fdd85acb62acf817c nmdc:dobj-11-wpzt9a27 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-qjz24t24.1/nmdc_wfmgas-11-qjz24t24.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65c2509060ad834fdd85acb62acf817c nmdc:dobj-11-g7xfvq35 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p9h7fy68.1_contigs.fna 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nmdc_wfmgas-11-qjz24t24.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3596a536ff27f6cd79edb26c6f99ab7 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1/nmdc_wfmgas-11-p9h7fy68.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3596a536ff27f6cd79edb26c6f99ab7 nmdc:dobj-11-ax3nqq36 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-qjz24t24.1/nmdc_wfmgas-11-qjz24t24.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3596a536ff27f6cd79edb26c6f99ab7 nmdc:dobj-11-gwva4w30 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p9h7fy68.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qjz24t24.1_assembly.agp 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nmdc:wfmgas-11-p9h7fy68.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qjz24t24.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfmgas-11-qjz24t24.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-a0bq3b03 -INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kc19ah06.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1 +INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vxcywa83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5687b844cbf0af67dec593bde42fc7d4 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5687b844cbf0af67dec593bde42fc7d4 nmdc:dobj-11-ymxtht24 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5687b844cbf0af67dec593bde42fc7d4 nmdc:dobj-11-v29k0t76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 nmdc:dobj-11-g8pfyk42 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 nmdc:dobj-11-n62xka74 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 nmdc:dobj-11-883w7679 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 nmdc:dobj-11-td3vs392 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 nmdc:dobj-11-5yhe3278 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 nmdc:dobj-11-a3e23k94 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a9addb084ba81228780189c80a5e476b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9addb084ba81228780189c80a5e476b nmdc:dobj-11-ma75y412 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9addb084ba81228780189c80a5e476b nmdc:dobj-11-dnee6w51 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d09c43bc278b970afcd99c5b3ffbcc6e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d09c43bc278b970afcd99c5b3ffbcc6e nmdc:dobj-11-20xfgf90 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d09c43bc278b970afcd99c5b3ffbcc6e nmdc:dobj-11-1hk6y658 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:884c00067757f3648d92db9366340b0d -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:884c00067757f3648d92db9366340b0d nmdc:dobj-11-4hdksk27 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:884c00067757f3648d92db9366340b0d nmdc:dobj-11-284vzv26 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91ec7367b50f6379ec85b460dc5a1f68 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91ec7367b50f6379ec85b460dc5a1f68 nmdc:dobj-11-fqkxe966 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91ec7367b50f6379ec85b460dc5a1f68 nmdc:dobj-11-d1abpj48 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 nmdc:dobj-11-jnryfp93 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-vxcywa83.1/nmdc_wfrbt-11-vxcywa83.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 nmdc:dobj-11-kyny7d85 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfrbt-11-kc19ah06.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vxcywa83.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfrbt-11-vxcywa83.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a0bq3b03 INFO:root:omics_processing_id: nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:796233a318facd24d5c14f44f479dc43 nmdc:dobj-11-akfsdh30 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:796233a318facd24d5c14f44f479dc43 nmdc:dobj-11-akwb1p63 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a7b00s66 -INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-06cb5316.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-06cb5316.1 +INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dng1zj89.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-dng1zj89.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff3cd9483c04b1db219dead3372b780a -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-06cb5316.1/nmdc_wfrqc-11-06cb5316.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff3cd9483c04b1db219dead3372b780a nmdc:dobj-11-ewyjqq82 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-dng1zj89.1/nmdc_wfrqc-11-dng1zj89.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff3cd9483c04b1db219dead3372b780a nmdc:dobj-11-kqydz410 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-06cb5316.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dng1zj89.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e52aa0da41e13df52179487aafc60ed4 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-06cb5316.1/nmdc_wfrqc-11-06cb5316.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e52aa0da41e13df52179487aafc60ed4 nmdc:dobj-11-dmxdqa45 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-dng1zj89.1/nmdc_wfrqc-11-dng1zj89.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e52aa0da41e13df52179487aafc60ed4 nmdc:dobj-11-qxb08607 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-06cb5316.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfrqc-11-06cb5316.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dng1zj89.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfrqc-11-dng1zj89.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-a7b00s66 -INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-fd834q29.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1 +INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0wdf1m38.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-0wdf1m38.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:431a14b1d40aea16ab1597bfc3203611 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:431a14b1d40aea16ab1597bfc3203611 nmdc:dobj-11-40ytw371 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-0wdf1m38.1/nmdc_wfmgas-11-0wdf1m38.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:431a14b1d40aea16ab1597bfc3203611 nmdc:dobj-11-6v742b26 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0wdf1m38.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ecbb1a27c05366241dc5d12db878c37 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ecbb1a27c05366241dc5d12db878c37 nmdc:dobj-11-jy8pby44 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-0wdf1m38.1/nmdc_wfmgas-11-0wdf1m38.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ecbb1a27c05366241dc5d12db878c37 nmdc:dobj-11-1mrczr25 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0wdf1m38.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:265810b4500a552b57966668fcc61562 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265810b4500a552b57966668fcc61562 nmdc:dobj-11-mqdyma98 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-0wdf1m38.1/nmdc_wfmgas-11-0wdf1m38.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265810b4500a552b57966668fcc61562 nmdc:dobj-11-y4jf2j54 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0wdf1m38.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:97d82d36c70bcfc40201e7a9f12a67a3 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97d82d36c70bcfc40201e7a9f12a67a3 nmdc:dobj-11-y3eb6h26 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-0wdf1m38.1/nmdc_wfmgas-11-0wdf1m38.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97d82d36c70bcfc40201e7a9f12a67a3 nmdc:dobj-11-22xd2q49 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0wdf1m38.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f028a927e1fb1b8f71f9f541581db53 -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1f3018fde1a7a7639dd85ee9642c1ea nmdc:dobj-11-nne39e83 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1f3018fde1a7a7639dd85ee9642c1ea nmdc:dobj-11-jtqzj438 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90994cf49b3e84e51d7b313fd6c031a0 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90994cf49b3e84e51d7b313fd6c031a0 nmdc:dobj-11-0wen5v73 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90994cf49b3e84e51d7b313fd6c031a0 nmdc:dobj-11-mf8rzb79 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8494637a042ecd6b5470702eb662893a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8494637a042ecd6b5470702eb662893a nmdc:dobj-11-4c759s87 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8494637a042ecd6b5470702eb662893a nmdc:dobj-11-bgecc543 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c612e3e540471677da18cd7091985ff6 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c612e3e540471677da18cd7091985ff6 nmdc:dobj-11-5wnkfw36 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c612e3e540471677da18cd7091985ff6 nmdc:dobj-11-6cnqpb31 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88e0926f84e091144f8df2c592b89e39 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88e0926f84e091144f8df2c592b89e39 nmdc:dobj-11-1zb19d45 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88e0926f84e091144f8df2c592b89e39 nmdc:dobj-11-2fpdr983 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e062b1c8dd01341c6619c148562623f6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e062b1c8dd01341c6619c148562623f6 nmdc:dobj-11-am9nhy10 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e062b1c8dd01341c6619c148562623f6 nmdc:dobj-11-45xj4626 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d488dc15a9c0d8ce0b9edddc454b1476 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d488dc15a9c0d8ce0b9edddc454b1476 nmdc:dobj-11-xzfr7911 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d488dc15a9c0d8ce0b9edddc454b1476 nmdc:dobj-11-dw1jy817 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b45157104eaa7e0662df1d80bbde27d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b45157104eaa7e0662df1d80bbde27d nmdc:dobj-11-e375r205 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b45157104eaa7e0662df1d80bbde27d nmdc:dobj-11-31ntpr74 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:afe3dda5cc6792097f63a436e2786dc3 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afe3dda5cc6792097f63a436e2786dc3 nmdc:dobj-11-vq5zte25 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-q9fz6e94.1/nmdc_wfrbt-11-q9fz6e94.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afe3dda5cc6792097f63a436e2786dc3 nmdc:dobj-11-4nvzyx03 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfrbt-11-zq6wr629.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q9fz6e94.1_kraken2_krona.html 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a065964a2e48b46a460abe4a05dd8049 nmdc:dobj-11-qgvk9f38 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-pn8ske91.1/nmdc_wfmgas-11-pn8ske91.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a065964a2e48b46a460abe4a05dd8049 nmdc:dobj-11-kah9ne53 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pn8ske91.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c66cc438d8fc6f160328734db1b44e4d -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53c302c537e38b9c59a2ae62ea5f69a9 nmdc:dobj-11-dyfgy891 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-pn8ske91.1/nmdc_wfmgas-11-pn8ske91.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53c302c537e38b9c59a2ae62ea5f69a9 nmdc:dobj-11-0014wp48 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pn8ske91.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75e4dbac293b74268199cf4dd725ad04 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75e4dbac293b74268199cf4dd725ad04 nmdc:dobj-11-37aat294 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-pn8ske91.1/nmdc_wfmgas-11-pn8ske91.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75e4dbac293b74268199cf4dd725ad04 nmdc:dobj-11-ae9qk274 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pn8ske91.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e9ba8eb0aafe70178dd33185777e9f2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e9ba8eb0aafe70178dd33185777e9f2 nmdc:dobj-11-xqk0nm69 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-pn8ske91.1/nmdc_wfmgas-11-pn8ske91.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e9ba8eb0aafe70178dd33185777e9f2 nmdc:dobj-11-0f4mgs43 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfmgas-11-xp7k7675.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pn8ske91.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfmgas-11-pn8ske91.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-sqz66z61 -INFO:root:New activity id created for nmdc:omprc-11-sqz66z61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ckmeya95.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1 +INFO:root:New activity id created for nmdc:omprc-11-sqz66z61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-emeq5a28.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b983789d4379b8ad7c2712f396e3a603 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b983789d4379b8ad7c2712f396e3a603 nmdc:dobj-11-3tzphh52 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b983789d4379b8ad7c2712f396e3a603 nmdc:dobj-11-czjfxr51 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:49112ae784f64075efdda656c18bd8ce -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49112ae784f64075efdda656c18bd8ce nmdc:dobj-11-k6f2yb05 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49112ae784f64075efdda656c18bd8ce nmdc:dobj-11-gmt6qf50 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cadb9ca59af1220df291b1982786e205 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cadb9ca59af1220df291b1982786e205 nmdc:dobj-11-gnveac47 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cadb9ca59af1220df291b1982786e205 nmdc:dobj-11-p4k09v45 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:856a6c981be6986702dc534a6e386667 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:856a6c981be6986702dc534a6e386667 nmdc:dobj-11-h38x2053 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:856a6c981be6986702dc534a6e386667 nmdc:dobj-11-15rgxk48 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb18ee2cb8a08864dfca05d07865cdc2 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb18ee2cb8a08864dfca05d07865cdc2 nmdc:dobj-11-w831jc07 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb18ee2cb8a08864dfca05d07865cdc2 nmdc:dobj-11-qb4t4c84 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 nmdc:dobj-11-gb0bpk22 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 nmdc:dobj-11-6mm7qn68 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 nmdc:dobj-11-k08zfs24 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 nmdc:dobj-11-pqmxfz97 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:38ccb457d30f57b11d2b94abb2b99179 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ccb457d30f57b11d2b94abb2b99179 nmdc:dobj-11-8erwe160 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ccb457d30f57b11d2b94abb2b99179 nmdc:dobj-11-9kbhfz94 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 nmdc:dobj-11-g2mysp23 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-emeq5a28.1/nmdc_wfrbt-11-emeq5a28.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 nmdc:dobj-11-fpwfzp03 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfrbt-11-ckmeya95.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-emeq5a28.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfrbt-11-emeq5a28.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-sqz66z61 INFO:root:omics_processing_id: nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86cb807a667b81fabb252a75eb79022c nmdc:dobj-11-hcw73462 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86cb807a667b81fabb252a75eb79022c nmdc:dobj-11-8szfxz40 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-prjs5x33 -INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-121db840.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-121db840.1 +INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-r6k07294.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-r6k07294.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:64f78bbabad2f9d5ba81ba08d72548d4 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-121db840.1/nmdc_wfrqc-11-121db840.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64f78bbabad2f9d5ba81ba08d72548d4 nmdc:dobj-11-jsyvnx40 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-r6k07294.1/nmdc_wfrqc-11-r6k07294.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64f78bbabad2f9d5ba81ba08d72548d4 nmdc:dobj-11-49ms4098 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-121db840.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-r6k07294.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:265f2da99dea8d10bf78c9c840b101c5 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-121db840.1/nmdc_wfrqc-11-121db840.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265f2da99dea8d10bf78c9c840b101c5 nmdc:dobj-11-fkmyrv83 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-r6k07294.1/nmdc_wfrqc-11-r6k07294.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265f2da99dea8d10bf78c9c840b101c5 nmdc:dobj-11-n60ngn62 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-121db840.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfrqc-11-121db840.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-r6k07294.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfrqc-11-r6k07294.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-prjs5x33 -INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bs3rhh28.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1 +INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ser60j72.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-ser60j72.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a23021719050b58ba81e789c30b9c5c2 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a23021719050b58ba81e789c30b9c5c2 nmdc:dobj-11-f197at36 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-ser60j72.1/nmdc_wfmgas-11-ser60j72.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a23021719050b58ba81e789c30b9c5c2 nmdc:dobj-11-mhc6v488 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ser60j72.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df3d11a581736d44c9e90d559c9379d9 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df3d11a581736d44c9e90d559c9379d9 nmdc:dobj-11-dhsye351 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-ser60j72.1/nmdc_wfmgas-11-ser60j72.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df3d11a581736d44c9e90d559c9379d9 nmdc:dobj-11-czbzs253 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ser60j72.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5d55d570572552f4d613813073ede4c -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5d55d570572552f4d613813073ede4c nmdc:dobj-11-4gz3eg18 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-ser60j72.1/nmdc_wfmgas-11-ser60j72.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5d55d570572552f4d613813073ede4c nmdc:dobj-11-cp9gj208 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ser60j72.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37c66cf049a5cee03b98856ab11236c1 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37c66cf049a5cee03b98856ab11236c1 nmdc:dobj-11-dkzzqe56 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-ser60j72.1/nmdc_wfmgas-11-ser60j72.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37c66cf049a5cee03b98856ab11236c1 nmdc:dobj-11-d0vaaj67 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ser60j72.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:54289b50c6b631a097a827578534adf3 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54289b50c6b631a097a827578534adf3 nmdc:dobj-11-6v0ea009 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-ser60j72.1/nmdc_wfmgas-11-ser60j72.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54289b50c6b631a097a827578534adf3 nmdc:dobj-11-ejmc8v85 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfmgas-11-bs3rhh28.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ser60j72.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfmgas-11-ser60j72.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-prjs5x33 -INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-hjs6xb56.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1 +INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-degdkw72.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f614cde2154a1906f1ff5059c69b8f2 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f614cde2154a1906f1ff5059c69b8f2 nmdc:dobj-11-nwe28c27 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f614cde2154a1906f1ff5059c69b8f2 nmdc:dobj-11-4nd0y379 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b5b740ccf227209b54a7ceb6c860cfb -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b5b740ccf227209b54a7ceb6c860cfb nmdc:dobj-11-kabn0x47 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b5b740ccf227209b54a7ceb6c860cfb nmdc:dobj-11-tfw0h737 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e94829532f3107d64349e53f82828a89 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e94829532f3107d64349e53f82828a89 nmdc:dobj-11-kbyky623 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e94829532f3107d64349e53f82828a89 nmdc:dobj-11-a55sxc64 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6dde7b5c1e2cb869a10cb03312110709 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6dde7b5c1e2cb869a10cb03312110709 nmdc:dobj-11-qcjr8a89 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6dde7b5c1e2cb869a10cb03312110709 nmdc:dobj-11-ttf8c573 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e5b88644c0e4b1953eae268202823e6 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e5b88644c0e4b1953eae268202823e6 nmdc:dobj-11-48csmh37 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e5b88644c0e4b1953eae268202823e6 nmdc:dobj-11-vk6dcx98 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb644ed38eaf40f3d421cf555968f623 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb644ed38eaf40f3d421cf555968f623 nmdc:dobj-11-7qr71277 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb644ed38eaf40f3d421cf555968f623 nmdc:dobj-11-181pdn86 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8296f03d176afd095c8fa98f4c2f9662 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8296f03d176afd095c8fa98f4c2f9662 nmdc:dobj-11-rjzetf81 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8296f03d176afd095c8fa98f4c2f9662 nmdc:dobj-11-kvdsmz88 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:658d593dbf5f8104188df08dc35153d1 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:658d593dbf5f8104188df08dc35153d1 nmdc:dobj-11-gyf2pm05 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:658d593dbf5f8104188df08dc35153d1 nmdc:dobj-11-y3t9wk44 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8492f8378ebb1740e86c75d0612d6e2c -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8492f8378ebb1740e86c75d0612d6e2c nmdc:dobj-11-trcgnw46 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-degdkw72.1/nmdc_wfrbt-11-degdkw72.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8492f8378ebb1740e86c75d0612d6e2c nmdc:dobj-11-0rs4q003 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfrbt-11-hjs6xb56.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-degdkw72.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfrbt-11-degdkw72.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-prjs5x33 INFO:root:omics_processing_id: nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20f714c290eeba8f76fe33ea21bf2291 nmdc:dobj-11-06c7dp33 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20f714c290eeba8f76fe33ea21bf2291 nmdc:dobj-11-6fmsmn52 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-y08fp921 -INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-30aj2e28.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-30aj2e28.1 +INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-w1nhbx07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-w1nhbx07.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f8ceed0240176014970c77f79f236ea3 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-30aj2e28.1/nmdc_wfrqc-11-30aj2e28.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8ceed0240176014970c77f79f236ea3 nmdc:dobj-11-4m33z536 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-w1nhbx07.1/nmdc_wfrqc-11-w1nhbx07.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8ceed0240176014970c77f79f236ea3 nmdc:dobj-11-093rhg59 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-30aj2e28.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w1nhbx07.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74b88ee74fbbbe184664ce624dee82e7 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-30aj2e28.1/nmdc_wfrqc-11-30aj2e28.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74b88ee74fbbbe184664ce624dee82e7 nmdc:dobj-11-h30n9e09 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-w1nhbx07.1/nmdc_wfrqc-11-w1nhbx07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74b88ee74fbbbe184664ce624dee82e7 nmdc:dobj-11-h33ckp63 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-30aj2e28.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfrqc-11-30aj2e28.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w1nhbx07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfrqc-11-w1nhbx07.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-y08fp921 -INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0jxnzn40.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1 +INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5aa42b03.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-5aa42b03.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12d98e676b4d3155b2feec02a2cf8821 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12d98e676b4d3155b2feec02a2cf8821 nmdc:dobj-11-nszha159 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-5aa42b03.1/nmdc_wfmgas-11-5aa42b03.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12d98e676b4d3155b2feec02a2cf8821 nmdc:dobj-11-xgk7bt03 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5aa42b03.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa905d7c7838b5e43e15940dc5db2100 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa905d7c7838b5e43e15940dc5db2100 nmdc:dobj-11-crrawb88 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-5aa42b03.1/nmdc_wfmgas-11-5aa42b03.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa905d7c7838b5e43e15940dc5db2100 nmdc:dobj-11-d3k65957 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5aa42b03.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e049958d5490dbe3228712803d73095a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e049958d5490dbe3228712803d73095a nmdc:dobj-11-hmr7dq43 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-5aa42b03.1/nmdc_wfmgas-11-5aa42b03.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e049958d5490dbe3228712803d73095a nmdc:dobj-11-5443cp23 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5aa42b03.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:088807ac3d09db863fbf4d936fadad06 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:088807ac3d09db863fbf4d936fadad06 nmdc:dobj-11-03zy1w73 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-5aa42b03.1/nmdc_wfmgas-11-5aa42b03.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:088807ac3d09db863fbf4d936fadad06 nmdc:dobj-11-gdqaxm36 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5aa42b03.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c8eb256434693a67f66d81eb6fb926e -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c8eb256434693a67f66d81eb6fb926e nmdc:dobj-11-92dxct31 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-5aa42b03.1/nmdc_wfmgas-11-5aa42b03.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c8eb256434693a67f66d81eb6fb926e nmdc:dobj-11-ree6sa60 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfmgas-11-0jxnzn40.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5aa42b03.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfmgas-11-5aa42b03.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-y08fp921 -INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-bqn7xn07.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1 +INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-mfdqbk79.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:faded304d5420687e5031b4fe13a41ba -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faded304d5420687e5031b4fe13a41ba nmdc:dobj-11-tadrn207 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faded304d5420687e5031b4fe13a41ba nmdc:dobj-11-mybjz103 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2862a776261adad85107834fd8758312 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2862a776261adad85107834fd8758312 nmdc:dobj-11-n9s0g749 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2862a776261adad85107834fd8758312 nmdc:dobj-11-7z8enc59 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f29a30f9357988e214b88cd10a52701 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f29a30f9357988e214b88cd10a52701 nmdc:dobj-11-gewzd131 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f29a30f9357988e214b88cd10a52701 nmdc:dobj-11-xs0ad834 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ffbd2cae06ea7b62b2d529960325ba9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ffbd2cae06ea7b62b2d529960325ba9 nmdc:dobj-11-m8az4h07 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ffbd2cae06ea7b62b2d529960325ba9 nmdc:dobj-11-g8s38c13 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:04d59bf20f0ff4407ad1165408e38c7e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04d59bf20f0ff4407ad1165408e38c7e nmdc:dobj-11-k5r0jy85 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04d59bf20f0ff4407ad1165408e38c7e nmdc:dobj-11-4bj9qd04 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 nmdc:dobj-11-6y9w0782 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 nmdc:dobj-11-ppg6vw57 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe403d58f13800b56e638d59ba96bf1b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe403d58f13800b56e638d59ba96bf1b nmdc:dobj-11-aq1z7k61 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe403d58f13800b56e638d59ba96bf1b nmdc:dobj-11-en1y0a12 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:551120d522b4a7a27545e1ff1236eb1e -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:551120d522b4a7a27545e1ff1236eb1e nmdc:dobj-11-a6m4ex21 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:551120d522b4a7a27545e1ff1236eb1e nmdc:dobj-11-cwh1vp92 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e589a42f0014167292de74fb1f58ce8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e589a42f0014167292de74fb1f58ce8 nmdc:dobj-11-8tssnr31 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-mfdqbk79.1/nmdc_wfrbt-11-mfdqbk79.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e589a42f0014167292de74fb1f58ce8 nmdc:dobj-11-6eygsk42 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfrbt-11-bqn7xn07.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mfdqbk79.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfrbt-11-mfdqbk79.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-y08fp921 INFO:root:omics_processing_id: nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6d907e2b41d013afcb2b6aa81c1be87 nmdc:dobj-11-jqmpx247 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6d907e2b41d013afcb2b6aa81c1be87 nmdc:dobj-11-q3qx6k70 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ysp4vq35 -INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4vp7m389.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-4vp7m389.1 +INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ng52ew06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-ng52ew06.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b275b2fb125c7fc8d77bba7698f2311 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-4vp7m389.1/nmdc_wfrqc-11-4vp7m389.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b275b2fb125c7fc8d77bba7698f2311 nmdc:dobj-11-epq3h365 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-ng52ew06.1/nmdc_wfrqc-11-ng52ew06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b275b2fb125c7fc8d77bba7698f2311 nmdc:dobj-11-jkygpd39 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4vp7m389.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ng52ew06.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b9b7f56b823fac39c7f82cc0355ec0c -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-4vp7m389.1/nmdc_wfrqc-11-4vp7m389.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b9b7f56b823fac39c7f82cc0355ec0c nmdc:dobj-11-nkxvg873 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-ng52ew06.1/nmdc_wfrqc-11-ng52ew06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b9b7f56b823fac39c7f82cc0355ec0c nmdc:dobj-11-9nxqtp96 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4vp7m389.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfrqc-11-4vp7m389.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ng52ew06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfrqc-11-ng52ew06.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ysp4vq35 -INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2tzte028.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1 +INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-12nfwk04.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-12nfwk04.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:097282771962a8077194e4bd2e0e0f3b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:097282771962a8077194e4bd2e0e0f3b nmdc:dobj-11-vw6e6x59 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-12nfwk04.1/nmdc_wfmgas-11-12nfwk04.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:097282771962a8077194e4bd2e0e0f3b nmdc:dobj-11-axvjat50 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-12nfwk04.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bdbaf92a5028414ae5e6dac2fb3314a8 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdbaf92a5028414ae5e6dac2fb3314a8 nmdc:dobj-11-3arnhy85 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-12nfwk04.1/nmdc_wfmgas-11-12nfwk04.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdbaf92a5028414ae5e6dac2fb3314a8 nmdc:dobj-11-z0vm8j08 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-12nfwk04.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbba44c97ee3c4de49c91d8609db8a51 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbba44c97ee3c4de49c91d8609db8a51 nmdc:dobj-11-vwtgbd92 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-12nfwk04.1/nmdc_wfmgas-11-12nfwk04.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbba44c97ee3c4de49c91d8609db8a51 nmdc:dobj-11-r1raa395 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-12nfwk04.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f8aea25dcd7f29578c046109b9725092 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8aea25dcd7f29578c046109b9725092 nmdc:dobj-11-hg65w327 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-12nfwk04.1/nmdc_wfmgas-11-12nfwk04.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8aea25dcd7f29578c046109b9725092 nmdc:dobj-11-vtpgy455 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-12nfwk04.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f05dd0954ff8fbee6eb09b1aa794355 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f05dd0954ff8fbee6eb09b1aa794355 nmdc:dobj-11-0c0h6r69 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-12nfwk04.1/nmdc_wfmgas-11-12nfwk04.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f05dd0954ff8fbee6eb09b1aa794355 nmdc:dobj-11-7m4k2q52 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfmgas-11-2tzte028.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-12nfwk04.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfmgas-11-12nfwk04.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ysp4vq35 -INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-rp50cs53.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1 +INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qjm5qx21.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:756e0ac2425eda82f589d56a14e67c34 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:756e0ac2425eda82f589d56a14e67c34 nmdc:dobj-11-nhvy1g58 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:756e0ac2425eda82f589d56a14e67c34 nmdc:dobj-11-bmcps405 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 nmdc:dobj-11-qy82qf73 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 nmdc:dobj-11-3s2jfx84 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3c7e366671c3d922125c2b82dde5f9b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3c7e366671c3d922125c2b82dde5f9b nmdc:dobj-11-84mrwe65 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3c7e366671c3d922125c2b82dde5f9b nmdc:dobj-11-yyx8eq50 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7f2baf22b5f33bfda016c580f279bcb9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f2baf22b5f33bfda016c580f279bcb9 nmdc:dobj-11-vydvxb21 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f2baf22b5f33bfda016c580f279bcb9 nmdc:dobj-11-hz2nxf18 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98228a7d2cc38ae730f6442175da7fbc -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98228a7d2cc38ae730f6442175da7fbc nmdc:dobj-11-pc38h352 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98228a7d2cc38ae730f6442175da7fbc nmdc:dobj-11-7xfxng68 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f46be59cb522b317b9bf738237940f0b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f46be59cb522b317b9bf738237940f0b nmdc:dobj-11-xhp2cd27 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f46be59cb522b317b9bf738237940f0b nmdc:dobj-11-ptxvcm10 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f1e7e173ce2a3730d05788c36ecc2350 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1e7e173ce2a3730d05788c36ecc2350 nmdc:dobj-11-gwr6hv47 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1e7e173ce2a3730d05788c36ecc2350 nmdc:dobj-11-9pnftn72 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b333856a7fa9bddb2e5b743bd8127c8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b333856a7fa9bddb2e5b743bd8127c8 nmdc:dobj-11-pbm8jf80 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b333856a7fa9bddb2e5b743bd8127c8 nmdc:dobj-11-h5xmb969 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2cab8bac20d35efc96806221abbf69d -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2cab8bac20d35efc96806221abbf69d nmdc:dobj-11-bj92vt48 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-qjm5qx21.1/nmdc_wfrbt-11-qjm5qx21.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2cab8bac20d35efc96806221abbf69d nmdc:dobj-11-7mj78208 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfrbt-11-rp50cs53.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qjm5qx21.1_kraken2_krona.html 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a519bd52b6c04196e219cea28b9828d nmdc:dobj-11-1v5p6c77 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-z29s7668.1/nmdc_wfmgas-11-z29s7668.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a519bd52b6c04196e219cea28b9828d nmdc:dobj-11-etc1fj64 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z29s7668.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 nmdc:dobj-11-8ze4x889 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-z29s7668.1/nmdc_wfmgas-11-z29s7668.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 nmdc:dobj-11-1ekbf275 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z29s7668.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90fe74a9b0acce7f2a60bcaad8181b37 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90fe74a9b0acce7f2a60bcaad8181b37 nmdc:dobj-11-56mbsb86 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-z29s7668.1/nmdc_wfmgas-11-z29s7668.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90fe74a9b0acce7f2a60bcaad8181b37 nmdc:dobj-11-87c83345 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z29s7668.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4768cfee3cc465d50b6df29f0996ca96 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4768cfee3cc465d50b6df29f0996ca96 nmdc:dobj-11-37cd6h39 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-z29s7668.1/nmdc_wfmgas-11-z29s7668.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4768cfee3cc465d50b6df29f0996ca96 nmdc:dobj-11-xsw3nq24 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z29s7668.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66485d8a5a362830e8c6de5e82b6da28 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66485d8a5a362830e8c6de5e82b6da28 nmdc:dobj-11-h6hnkn86 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-z29s7668.1/nmdc_wfmgas-11-z29s7668.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66485d8a5a362830e8c6de5e82b6da28 nmdc:dobj-11-5tnprv83 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfmgas-11-y16kdh87.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z29s7668.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:079810154a4bc3cf9081189e81143815 nmdc:dobj-11-0c8bca66 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:079810154a4bc3cf9081189e81143815 nmdc:dobj-11-7cn51v71 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff7c0af07a528819c97a37da0336d16f -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff7c0af07a528819c97a37da0336d16f nmdc:dobj-11-rs797950 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff7c0af07a528819c97a37da0336d16f nmdc:dobj-11-9xhx3v40 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44ae37842fd4075371a1503fd2540e5a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ae37842fd4075371a1503fd2540e5a nmdc:dobj-11-xxqshm03 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ae37842fd4075371a1503fd2540e5a nmdc:dobj-11-3y2byr91 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 nmdc:dobj-11-wavyqz09 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 nmdc:dobj-11-hy630p14 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7efb1644b8ac67406ac2bb3c9206518c -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7efb1644b8ac67406ac2bb3c9206518c nmdc:dobj-11-138kg912 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7efb1644b8ac67406ac2bb3c9206518c nmdc:dobj-11-5y7rfs92 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a867326eda4ad18701c2c2326295cc75 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a867326eda4ad18701c2c2326295cc75 nmdc:dobj-11-j9ra4b79 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a867326eda4ad18701c2c2326295cc75 nmdc:dobj-11-d6jwwm61 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7dd0500dee529770c19006368cdbf843 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dd0500dee529770c19006368cdbf843 nmdc:dobj-11-ghpzmj94 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dd0500dee529770c19006368cdbf843 nmdc:dobj-11-z2p5rz72 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a10aad2d2f352298c72610a1556783ce -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a10aad2d2f352298c72610a1556783ce nmdc:dobj-11-hg9xxs19 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a10aad2d2f352298c72610a1556783ce nmdc:dobj-11-c17bt714 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66940e094d2be736538bf752d6e626c4 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66940e094d2be736538bf752d6e626c4 nmdc:dobj-11-6kfgpa39 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-hnr1hb67.1/nmdc_wfrbt-11-hnr1hb67.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66940e094d2be736538bf752d6e626c4 nmdc:dobj-11-z5bzpt75 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfrbt-11-t3e4tt62.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hnr1hb67.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfrbt-11-hnr1hb67.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-rxv6kd89 INFO:root:omics_processing_id: nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f503435c01cf49ed7805ce4c2d26d46 nmdc:dobj-11-ct7m6f02 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f503435c01cf49ed7805ce4c2d26d46 nmdc:dobj-11-w2xv3a14 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0jzfnf61 -INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vcwpt249.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-vcwpt249.1 +INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-06acsw79.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-06acsw79.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e79327783fe58785d9a0238c3ab7165 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-vcwpt249.1/nmdc_wfrqc-11-vcwpt249.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e79327783fe58785d9a0238c3ab7165 nmdc:dobj-11-nc3fvv14 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-06acsw79.1/nmdc_wfrqc-11-06acsw79.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e79327783fe58785d9a0238c3ab7165 nmdc:dobj-11-hb94c531 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcwpt249.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-06acsw79.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6fe56b7ad72e0db84e769adf573936c9 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-vcwpt249.1/nmdc_wfrqc-11-vcwpt249.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fe56b7ad72e0db84e769adf573936c9 nmdc:dobj-11-ecnkbn07 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-06acsw79.1/nmdc_wfrqc-11-06acsw79.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fe56b7ad72e0db84e769adf573936c9 nmdc:dobj-11-020bez44 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcwpt249.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfrqc-11-vcwpt249.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-06acsw79.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfrqc-11-06acsw79.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-0jzfnf61 -INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7p29xy79.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1 +INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2ejxrp67.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-2ejxrp67.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82f7cca2b2cb17816eaf5076c2119064 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82f7cca2b2cb17816eaf5076c2119064 nmdc:dobj-11-12ejcf09 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-2ejxrp67.1/nmdc_wfmgas-11-2ejxrp67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82f7cca2b2cb17816eaf5076c2119064 nmdc:dobj-11-rzyhme80 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ejxrp67.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 nmdc:dobj-11-f8bxar49 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-2ejxrp67.1/nmdc_wfmgas-11-2ejxrp67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 nmdc:dobj-11-pet46k04 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ejxrp67.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31fade0dbd18fdea0ff83bf51a220641 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31fade0dbd18fdea0ff83bf51a220641 nmdc:dobj-11-11fb5y96 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-2ejxrp67.1/nmdc_wfmgas-11-2ejxrp67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31fade0dbd18fdea0ff83bf51a220641 nmdc:dobj-11-bysk3c94 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ejxrp67.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9641980460af2b2b5b960022bfbe6ba5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9641980460af2b2b5b960022bfbe6ba5 nmdc:dobj-11-wr5hxj41 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-2ejxrp67.1/nmdc_wfmgas-11-2ejxrp67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9641980460af2b2b5b960022bfbe6ba5 nmdc:dobj-11-cz55bv69 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ejxrp67.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb266f15afb6a5af6bd054e1ce131d27 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb266f15afb6a5af6bd054e1ce131d27 nmdc:dobj-11-102p2w58 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-2ejxrp67.1/nmdc_wfmgas-11-2ejxrp67.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb266f15afb6a5af6bd054e1ce131d27 nmdc:dobj-11-j891gd72 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfmgas-11-7p29xy79.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ejxrp67.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfmgas-11-2ejxrp67.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-0jzfnf61 -INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-pmvwpe70.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1 +INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-tawp5c28.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 nmdc:dobj-11-688geb42 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 nmdc:dobj-11-1w464691 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8dfe0251b7531da70cde8e5a0d44686a -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dfe0251b7531da70cde8e5a0d44686a nmdc:dobj-11-abvbgm77 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dfe0251b7531da70cde8e5a0d44686a nmdc:dobj-11-m2w22g63 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e06ae82ad46cf9579742536eb879c819 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e06ae82ad46cf9579742536eb879c819 nmdc:dobj-11-4x33m848 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e06ae82ad46cf9579742536eb879c819 nmdc:dobj-11-endcsx52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a62d3890a2dd25117f0a07c418adf8b -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a62d3890a2dd25117f0a07c418adf8b nmdc:dobj-11-erec4797 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a62d3890a2dd25117f0a07c418adf8b nmdc:dobj-11-f6rqw685 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:694174082a13290f789b435fea8bc451 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:694174082a13290f789b435fea8bc451 nmdc:dobj-11-55zx2508 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:694174082a13290f789b435fea8bc451 nmdc:dobj-11-h9j1jc54 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed6b118f66f2ade75aaca5e27b73304a -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed6b118f66f2ade75aaca5e27b73304a nmdc:dobj-11-sm4mxt16 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed6b118f66f2ade75aaca5e27b73304a nmdc:dobj-11-31dnff84 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f270aa128dd2057f3ef8ad0759e240ce -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f270aa128dd2057f3ef8ad0759e240ce nmdc:dobj-11-9dpsjs06 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f270aa128dd2057f3ef8ad0759e240ce nmdc:dobj-11-eydbg130 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:638a10778451ae6f17dcea786424731d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:638a10778451ae6f17dcea786424731d nmdc:dobj-11-p94xkc31 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:638a10778451ae6f17dcea786424731d nmdc:dobj-11-3dm5z474 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c282197ecceebb84a7f931fc2389f59 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c282197ecceebb84a7f931fc2389f59 nmdc:dobj-11-jfyk2x42 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-tawp5c28.1/nmdc_wfrbt-11-tawp5c28.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c282197ecceebb84a7f931fc2389f59 nmdc:dobj-11-zyqx0556 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfrbt-11-pmvwpe70.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tawp5c28.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfrbt-11-tawp5c28.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-0jzfnf61 INFO:root:omics_processing_id: nmdc:omprc-11-qm563f05 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2112eaa62884c29f33a47669bf01bb53 nmdc:dobj-11-vzt8x324 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2112eaa62884c29f33a47669bf01bb53 nmdc:dobj-11-4jtrb138 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-qm563f05 -INFO:root:New activity id created for nmdc:omprc-11-qm563f05 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rb6sjm59.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfrqc-11-rb6sjm59.1 +INFO:root:New activity id created for nmdc:omprc-11-qm563f05 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xdjvz838.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfrqc-11-xdjvz838.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9846d490bcd85140cae6c67a671345ae -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfrqc-11-rb6sjm59.1/nmdc_wfrqc-11-rb6sjm59.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9846d490bcd85140cae6c67a671345ae nmdc:dobj-11-zbnhwf98 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfrqc-11-xdjvz838.1/nmdc_wfrqc-11-xdjvz838.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9846d490bcd85140cae6c67a671345ae nmdc:dobj-11-0566n060 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-qm563f05 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rb6sjm59.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xdjvz838.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d426ff495a9885ec516546b9cd7e1d25 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfrqc-11-rb6sjm59.1/nmdc_wfrqc-11-rb6sjm59.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d426ff495a9885ec516546b9cd7e1d25 nmdc:dobj-11-efm2cs23 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfrqc-11-xdjvz838.1/nmdc_wfrqc-11-xdjvz838.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d426ff495a9885ec516546b9cd7e1d25 nmdc:dobj-11-3zea2830 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-qm563f05 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rb6sjm59.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0f21da30e01f45f336e29ebd9f9ebf90 nmdc:wfrqc-11-rb6sjm59.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xdjvz838.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0f21da30e01f45f336e29ebd9f9ebf90 nmdc:wfrqc-11-xdjvz838.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-qm563f05 -INFO:root:New activity id created for nmdc:omprc-11-qm563f05 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6x4p1436.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1 +INFO:root:New activity id created for nmdc:omprc-11-qm563f05 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hm3mfd36.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-hm3mfd36.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d10910d29200afd36fbb483323f78910 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d10910d29200afd36fbb483323f78910 nmdc:dobj-11-38c9c629 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-hm3mfd36.1/nmdc_wfmgas-11-hm3mfd36.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d10910d29200afd36fbb483323f78910 nmdc:dobj-11-5kkyxg07 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-qm563f05 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hm3mfd36.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3590b9c13f477435cb210006c9a088f7 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3590b9c13f477435cb210006c9a088f7 nmdc:dobj-11-evm7fa15 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-hm3mfd36.1/nmdc_wfmgas-11-hm3mfd36.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3590b9c13f477435cb210006c9a088f7 nmdc:dobj-11-ftkz6g47 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-qm563f05 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hm3mfd36.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:435db0d40b74bc58f7012375f95a22dc -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:435db0d40b74bc58f7012375f95a22dc nmdc:dobj-11-2c219y50 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-hm3mfd36.1/nmdc_wfmgas-11-hm3mfd36.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:435db0d40b74bc58f7012375f95a22dc nmdc:dobj-11-k3aajn03 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-qm563f05 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hm3mfd36.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f49b70f2b86bdf6ab8de63ae6af22f13 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f49b70f2b86bdf6ab8de63ae6af22f13 nmdc:dobj-11-3k183960 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-hm3mfd36.1/nmdc_wfmgas-11-hm3mfd36.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f49b70f2b86bdf6ab8de63ae6af22f13 nmdc:dobj-11-pgkx6b26 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-qm563f05 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hm3mfd36.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9fcb7512bd57f6854980c6305e72da6 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9fcb7512bd57f6854980c6305e72da6 nmdc:dobj-11-q717xs51 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-hm3mfd36.1/nmdc_wfmgas-11-hm3mfd36.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9fcb7512bd57f6854980c6305e72da6 nmdc:dobj-11-c7dhms71 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-qm563f05 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0f21da30e01f45f336e29ebd9f9ebf90 nmdc:wfmgas-11-6x4p1436.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hm3mfd36.1_pairedMapped_sorted.bam 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created for nmdc:omprc-11-zvpsbf06 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-w88bev63.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrqc-11-w88bev63.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c927288230899c93bdf28348fc87b222 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrqc-11-rrzdt956.1/nmdc_wfrqc-11-rrzdt956.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c927288230899c93bdf28348fc87b222 nmdc:dobj-11-ccs8he80 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrqc-11-w88bev63.1/nmdc_wfrqc-11-w88bev63.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c927288230899c93bdf28348fc87b222 nmdc:dobj-11-54wffp57 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rrzdt956.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w88bev63.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a24dab0d27071262c4fa2ae54edb2e7 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrqc-11-rrzdt956.1/nmdc_wfrqc-11-rrzdt956.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a24dab0d27071262c4fa2ae54edb2e7 nmdc:dobj-11-bvdwva12 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrqc-11-w88bev63.1/nmdc_wfrqc-11-w88bev63.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a24dab0d27071262c4fa2ae54edb2e7 nmdc:dobj-11-dmgtdz74 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rrzdt956.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfrqc-11-rrzdt956.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w88bev63.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfrqc-11-w88bev63.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zvpsbf06 -INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-sx8y0z55.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sx8y0z55.1 +INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-sagypf26.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sagypf26.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:243925579b9f4fb9ae43011ced963695 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sx8y0z55.1/nmdc_wfmgas-11-sx8y0z55.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:243925579b9f4fb9ae43011ced963695 nmdc:dobj-11-jev5yd11 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sagypf26.1/nmdc_wfmgas-11-sagypf26.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:243925579b9f4fb9ae43011ced963695 nmdc:dobj-11-2x7z5284 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sx8y0z55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sagypf26.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2107a8bc1a5ae7c52b27320e1bb34e2 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sx8y0z55.1/nmdc_wfmgas-11-sx8y0z55.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2107a8bc1a5ae7c52b27320e1bb34e2 nmdc:dobj-11-bk5xjj14 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sagypf26.1/nmdc_wfmgas-11-sagypf26.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2107a8bc1a5ae7c52b27320e1bb34e2 nmdc:dobj-11-827jt702 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sx8y0z55.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sagypf26.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6aabe721c4a7185940b57f413e551390 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sx8y0z55.1/nmdc_wfmgas-11-sx8y0z55.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6aabe721c4a7185940b57f413e551390 nmdc:dobj-11-tacecm55 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sagypf26.1/nmdc_wfmgas-11-sagypf26.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6aabe721c4a7185940b57f413e551390 nmdc:dobj-11-byzfxd22 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sx8y0z55.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sagypf26.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:508ec6f2b952632f50ecdd8c68db34fb -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sx8y0z55.1/nmdc_wfmgas-11-sx8y0z55.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:508ec6f2b952632f50ecdd8c68db34fb nmdc:dobj-11-a2x75t93 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sagypf26.1/nmdc_wfmgas-11-sagypf26.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:508ec6f2b952632f50ecdd8c68db34fb nmdc:dobj-11-wg4np403 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sx8y0z55.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sagypf26.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f32e6cfc089edd4d67844621dd5e9ac -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sx8y0z55.1/nmdc_wfmgas-11-sx8y0z55.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f32e6cfc089edd4d67844621dd5e9ac nmdc:dobj-11-cv8g0y53 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sagypf26.1/nmdc_wfmgas-11-sagypf26.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f32e6cfc089edd4d67844621dd5e9ac nmdc:dobj-11-rwyc2192 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sx8y0z55.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfmgas-11-sx8y0z55.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sagypf26.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfmgas-11-sagypf26.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-zvpsbf06 -INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-nawwqp81.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1 +INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gv1p9r15.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21d2f0e1bd49b66eb71b6ce2599ee503 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21d2f0e1bd49b66eb71b6ce2599ee503 nmdc:dobj-11-s4js0p39 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21d2f0e1bd49b66eb71b6ce2599ee503 nmdc:dobj-11-b9em1e96 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:854c197884c2ba55cb13d2b9eb3f4c8e -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:854c197884c2ba55cb13d2b9eb3f4c8e nmdc:dobj-11-6d1jmg17 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:854c197884c2ba55cb13d2b9eb3f4c8e nmdc:dobj-11-y3p8ed91 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd2fe7285199963f3a867971c9274343 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd2fe7285199963f3a867971c9274343 nmdc:dobj-11-qe5seh47 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd2fe7285199963f3a867971c9274343 nmdc:dobj-11-88tk4w91 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b99bfd06b67f44f2529e87d3f90327d -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b99bfd06b67f44f2529e87d3f90327d nmdc:dobj-11-2prf3e93 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b99bfd06b67f44f2529e87d3f90327d nmdc:dobj-11-jy5y0411 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:788e20bad88f057e08bb1a9ef55d1050 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:788e20bad88f057e08bb1a9ef55d1050 nmdc:dobj-11-jf3awa28 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:788e20bad88f057e08bb1a9ef55d1050 nmdc:dobj-11-3pw6z970 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eaa014c659b30a6c17fb6650d11ab769 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eaa014c659b30a6c17fb6650d11ab769 nmdc:dobj-11-p8404q43 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eaa014c659b30a6c17fb6650d11ab769 nmdc:dobj-11-ygfqdr22 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6df14e79b47a45571745ac1d9577ff55 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6df14e79b47a45571745ac1d9577ff55 nmdc:dobj-11-ev8bpc78 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6df14e79b47a45571745ac1d9577ff55 nmdc:dobj-11-fbe5hb17 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71d35d455a16985e82f221b57abb662d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71d35d455a16985e82f221b57abb662d nmdc:dobj-11-9x116g62 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71d35d455a16985e82f221b57abb662d nmdc:dobj-11-226st060 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f737a4e9be8426619b91ab3e6cc0a681 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f737a4e9be8426619b91ab3e6cc0a681 nmdc:dobj-11-72n2z654 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-gv1p9r15.1/nmdc_wfrbt-11-gv1p9r15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f737a4e9be8426619b91ab3e6cc0a681 nmdc:dobj-11-v1fgkd89 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfrbt-11-nawwqp81.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gv1p9r15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfrbt-11-gv1p9r15.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-zvpsbf06 INFO:root:omics_processing_id: nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0638ba985a67df56f072b7544e46317 nmdc:dobj-11-2r1dh165 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0638ba985a67df56f072b7544e46317 nmdc:dobj-11-sd5qcz66 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-sdbbqs35 -INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ky3nvr73.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-ky3nvr73.1 +INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-px454f43.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-px454f43.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80bafe68c83e4be83b2ada0e5f1dee0c -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-ky3nvr73.1/nmdc_wfrqc-11-ky3nvr73.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80bafe68c83e4be83b2ada0e5f1dee0c nmdc:dobj-11-0b0gte08 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-px454f43.1/nmdc_wfrqc-11-px454f43.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80bafe68c83e4be83b2ada0e5f1dee0c nmdc:dobj-11-zpjkvk80 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ky3nvr73.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:388f437e34b2719969fbca505275632e nmdc:wfrqc-11-ky3nvr73.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-px454f43.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:388f437e34b2719969fbca505275632e nmdc:wfrqc-11-px454f43.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-sdbbqs35 -INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5w24bm05.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1 +INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-h58j2j96.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-h58j2j96.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d92c122124714a61cdedd87dc2e460d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d92c122124714a61cdedd87dc2e460d nmdc:dobj-11-37ee4y41 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-h58j2j96.1/nmdc_wfmgas-11-h58j2j96.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d92c122124714a61cdedd87dc2e460d nmdc:dobj-11-2tgv8q48 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h58j2j96.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:108c62768293874eb901fa014d98c07a -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:108c62768293874eb901fa014d98c07a nmdc:dobj-11-wvthmm39 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-h58j2j96.1/nmdc_wfmgas-11-h58j2j96.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:108c62768293874eb901fa014d98c07a nmdc:dobj-11-4y2mj542 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h58j2j96.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b9135feeee2c737cd11c9ff504e87689 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9135feeee2c737cd11c9ff504e87689 nmdc:dobj-11-pja03x71 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-h58j2j96.1/nmdc_wfmgas-11-h58j2j96.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9135feeee2c737cd11c9ff504e87689 nmdc:dobj-11-ex2p1t07 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h58j2j96.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e0348e43569d2a8b15c9ba4796af819 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e0348e43569d2a8b15c9ba4796af819 nmdc:dobj-11-hrefb239 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-h58j2j96.1/nmdc_wfmgas-11-h58j2j96.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e0348e43569d2a8b15c9ba4796af819 nmdc:dobj-11-qtn16e25 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h58j2j96.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f nmdc:dobj-11-mm4wh987 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-h58j2j96.1/nmdc_wfmgas-11-h58j2j96.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f nmdc:dobj-11-tspncx37 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:388f437e34b2719969fbca505275632e nmdc:wfmgas-11-5w24bm05.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h58j2j96.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe7efd7d37ed3c916db73af90e6b4656 nmdc:dobj-11-mxwaky02 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe7efd7d37ed3c916db73af90e6b4656 nmdc:dobj-11-nnk10z35 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c484cee43b39868f216cfc9f89e77ba -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c484cee43b39868f216cfc9f89e77ba nmdc:dobj-11-qgh1yw68 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c484cee43b39868f216cfc9f89e77ba nmdc:dobj-11-05kskp41 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78972c7f2b3eb2c6ae4041ae696aae90 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78972c7f2b3eb2c6ae4041ae696aae90 nmdc:dobj-11-e27nek86 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78972c7f2b3eb2c6ae4041ae696aae90 nmdc:dobj-11-q3pr2685 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d55beb8645eff57d8806666e570d2d3e -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d55beb8645eff57d8806666e570d2d3e nmdc:dobj-11-91g5vh67 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d55beb8645eff57d8806666e570d2d3e nmdc:dobj-11-9d5bbk09 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:187ed60485c2a08b6fde0191a4332f3b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:187ed60485c2a08b6fde0191a4332f3b nmdc:dobj-11-z8xcnb41 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:187ed60485c2a08b6fde0191a4332f3b nmdc:dobj-11-ggxr4d71 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 nmdc:dobj-11-7g955988 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 nmdc:dobj-11-pza1yp14 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 nmdc:dobj-11-pdm7b923 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 nmdc:dobj-11-bct17z37 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d61542ab86302b9f661b10e7a90c9bb1 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d61542ab86302b9f661b10e7a90c9bb1 nmdc:dobj-11-q7yxre21 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d61542ab86302b9f661b10e7a90c9bb1 nmdc:dobj-11-a32h5h31 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cca621d7bee98da5f55ccbcf3f296342 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cca621d7bee98da5f55ccbcf3f296342 nmdc:dobj-11-gvmjvs55 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-fekr8768.1/nmdc_wfrbt-11-fekr8768.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cca621d7bee98da5f55ccbcf3f296342 nmdc:dobj-11-mgvr2e79 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:388f437e34b2719969fbca505275632e nmdc:wfrbt-11-nr9ysw15.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fekr8768.1_kraken2_krona.html 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nmdc:48a6d56325c5587309f8c9f0c43b72d2 nmdc:wfrqc-11-g2ey6n71.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7p12y474.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:48a6d56325c5587309f8c9f0c43b72d2 nmdc:wfrqc-11-7p12y474.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-wjagc521 -INFO:root:New activity id created for nmdc:omprc-11-wjagc521 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3w4cxz51.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-3w4cxz51.1 +INFO:root:New activity id created for nmdc:omprc-11-wjagc521 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yr984883.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-yr984883.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:689a1c1553dd39e32b2b089b33f05e7d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-3w4cxz51.1/nmdc_wfmgas-11-3w4cxz51.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:689a1c1553dd39e32b2b089b33f05e7d nmdc:dobj-11-g90vwe09 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-yr984883.1/nmdc_wfmgas-11-yr984883.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:689a1c1553dd39e32b2b089b33f05e7d nmdc:dobj-11-gqyg8b44 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3w4cxz51.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yr984883.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a2f73f009c688aee3294b7bfb0f5d8f -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-3w4cxz51.1/nmdc_wfmgas-11-3w4cxz51.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ade85cb793b2c8272aab74e8064c4d94 nmdc:dobj-11-z2qbrk63 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-yr984883.1/nmdc_wfmgas-11-yr984883.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ade85cb793b2c8272aab74e8064c4d94 nmdc:dobj-11-c815sm11 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3w4cxz51.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yr984883.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2051c3848f8882f76acca2240af778ee -INFO:root:New file path computed for Assembly AGP: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-3w4cxz51.1/nmdc_wfmgas-11-3w4cxz51.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40212546ef6fdee6393a1e05c23c4722 nmdc:dobj-11-0kga5m12 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-yr984883.1/nmdc_wfmgas-11-yr984883.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40212546ef6fdee6393a1e05c23c4722 nmdc:dobj-11-sxpeqr52 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3w4cxz51.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:48a6d56325c5587309f8c9f0c43b72d2 nmdc:wfmgas-11-3w4cxz51.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yr984883.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a8c6bb81833bd93fb2941c292dc743e nmdc:dobj-11-gc92mn97 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a8c6bb81833bd93fb2941c292dc743e nmdc:dobj-11-yytx0227 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45b079f76ebc5363d5e31b67968a90f7 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45b079f76ebc5363d5e31b67968a90f7 nmdc:dobj-11-qxnqpe12 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45b079f76ebc5363d5e31b67968a90f7 nmdc:dobj-11-f31x6g07 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0dac6f4bf0bcf2b06450acb586b411f2 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0dac6f4bf0bcf2b06450acb586b411f2 nmdc:dobj-11-n319ka16 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0dac6f4bf0bcf2b06450acb586b411f2 nmdc:dobj-11-g5hhvt60 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 nmdc:dobj-11-a3phpe70 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 nmdc:dobj-11-n034rf08 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f7cc34d80fb00b557c9636a1a495b27 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f7cc34d80fb00b557c9636a1a495b27 nmdc:dobj-11-f8ee1279 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f7cc34d80fb00b557c9636a1a495b27 nmdc:dobj-11-faztvx29 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b46b161f2f61fe392d93059b2ec257ad -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b46b161f2f61fe392d93059b2ec257ad nmdc:dobj-11-zkkqst02 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b46b161f2f61fe392d93059b2ec257ad nmdc:dobj-11-0vx9td95 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f355a874a6d82e6bf13bfd516cebbdd1 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f355a874a6d82e6bf13bfd516cebbdd1 nmdc:dobj-11-694qjk12 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f355a874a6d82e6bf13bfd516cebbdd1 nmdc:dobj-11-3qyata86 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fa688952a54066e7aa33a62c42ef037 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa688952a54066e7aa33a62c42ef037 nmdc:dobj-11-4bk3vh52 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa688952a54066e7aa33a62c42ef037 nmdc:dobj-11-8hgtmp35 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5065c2a76ab916e8866d3836cd469534 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5065c2a76ab916e8866d3836cd469534 nmdc:dobj-11-s4kdy581 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-vfja9x40.1/nmdc_wfrbt-11-vfja9x40.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5065c2a76ab916e8866d3836cd469534 nmdc:dobj-11-m91y6m46 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:48a6d56325c5587309f8c9f0c43b72d2 nmdc:wfrbt-11-jzftwn91.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vfja9x40.1_kraken2_krona.html 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29712e8e940103416e599270361200fd nmdc:dobj-11-1e7e9s30 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-5jtye727.1/nmdc_wfmgas-11-5jtye727.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29712e8e940103416e599270361200fd nmdc:dobj-11-4q92e078 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5jtye727.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61f37cef4009a10fe186a734cc66df57 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:019f39760fdc004add2ee15e6f96b695 nmdc:dobj-11-v5nz8z77 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-5jtye727.1/nmdc_wfmgas-11-5jtye727.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:019f39760fdc004add2ee15e6f96b695 nmdc:dobj-11-yzt9t856 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5jtye727.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41fcb1932d70ad158bd64467f587a7e9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41fcb1932d70ad158bd64467f587a7e9 nmdc:dobj-11-dyrh6r52 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-5jtye727.1/nmdc_wfmgas-11-5jtye727.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41fcb1932d70ad158bd64467f587a7e9 nmdc:dobj-11-cf7d4s41 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5jtye727.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e0836aceb5837d49208da0304223b6a -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e0836aceb5837d49208da0304223b6a nmdc:dobj-11-cm66jm90 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-5jtye727.1/nmdc_wfmgas-11-5jtye727.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e0836aceb5837d49208da0304223b6a nmdc:dobj-11-vpkb9669 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfmgas-11-epc8pj76.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5jtye727.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d575a3c8ac62938cf78cea02d3d57bc nmdc:dobj-11-x3j6a131 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d575a3c8ac62938cf78cea02d3d57bc nmdc:dobj-11-m2tdr280 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc6ab16aa3a0073a1914e885cb463655 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc6ab16aa3a0073a1914e885cb463655 nmdc:dobj-11-6zpjt881 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc6ab16aa3a0073a1914e885cb463655 nmdc:dobj-11-w120wg45 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:04e4304630e24100383eae8a58c8579c -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04e4304630e24100383eae8a58c8579c nmdc:dobj-11-ex9kgc55 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04e4304630e24100383eae8a58c8579c nmdc:dobj-11-yegwmb27 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 nmdc:dobj-11-sntayr97 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 nmdc:dobj-11-7fey9h89 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7bddcb460f521571aa422eb79cfeb24a -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bddcb460f521571aa422eb79cfeb24a nmdc:dobj-11-dqneqs31 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bddcb460f521571aa422eb79cfeb24a nmdc:dobj-11-j2nm6689 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3689750ab107b9a250599dc304de7a02 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3689750ab107b9a250599dc304de7a02 nmdc:dobj-11-jghwq591 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3689750ab107b9a250599dc304de7a02 nmdc:dobj-11-pewswe45 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdbcf2b451e44e40f0afa535371531c4 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdbcf2b451e44e40f0afa535371531c4 nmdc:dobj-11-mr1esj65 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdbcf2b451e44e40f0afa535371531c4 nmdc:dobj-11-z4h9ys15 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e4b3a8a0bde60626d00d335248b5eb8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e4b3a8a0bde60626d00d335248b5eb8 nmdc:dobj-11-hsbrg740 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e4b3a8a0bde60626d00d335248b5eb8 nmdc:dobj-11-44c14b22 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23c0c12d2aeaf1080ca536fa7695d7ac -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23c0c12d2aeaf1080ca536fa7695d7ac nmdc:dobj-11-wv5vbp83 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-6r032e49.1/nmdc_wfrbt-11-6r032e49.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23c0c12d2aeaf1080ca536fa7695d7ac nmdc:dobj-11-49xakf74 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfrbt-11-5cnzw320.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6r032e49.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfrbt-11-6r032e49.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-mpwyy287 INFO:root:omics_processing_id: nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60ee79e73d43651cee0e89de0c346a20 nmdc:dobj-11-nznec290 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60ee79e73d43651cee0e89de0c346a20 nmdc:dobj-11-f2hy9e57 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-07688c39 -INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5h549229.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-5h549229.1 +INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hvev9179.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-hvev9179.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c2162fd224d6f4c48062c525bcb68fdd -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-5h549229.1/nmdc_wfrqc-11-5h549229.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2162fd224d6f4c48062c525bcb68fdd nmdc:dobj-11-926bx433 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-hvev9179.1/nmdc_wfrqc-11-hvev9179.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2162fd224d6f4c48062c525bcb68fdd nmdc:dobj-11-6gpcxx02 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5h549229.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hvev9179.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0c8be1c03c6f7b03e021001c26a9c7d -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-5h549229.1/nmdc_wfrqc-11-5h549229.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0c8be1c03c6f7b03e021001c26a9c7d nmdc:dobj-11-1z8q9s66 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-hvev9179.1/nmdc_wfrqc-11-hvev9179.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0c8be1c03c6f7b03e021001c26a9c7d nmdc:dobj-11-0fvbzn54 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5h549229.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfrqc-11-5h549229.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hvev9179.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfrqc-11-hvev9179.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-07688c39 -INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-cy6aed55.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1 +INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-17q7g587.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-17q7g587.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73859fd8b67980b7c1a3cb631229f115 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73859fd8b67980b7c1a3cb631229f115 nmdc:dobj-11-j53t1820 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-17q7g587.1/nmdc_wfmgas-11-17q7g587.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73859fd8b67980b7c1a3cb631229f115 nmdc:dobj-11-hze95p43 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-17q7g587.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee11987d24b07a3e387659dab2b99980 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee11987d24b07a3e387659dab2b99980 nmdc:dobj-11-a8p56a77 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-17q7g587.1/nmdc_wfmgas-11-17q7g587.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee11987d24b07a3e387659dab2b99980 nmdc:dobj-11-atzsjg97 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-17q7g587.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb nmdc:dobj-11-8yrs4t76 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-17q7g587.1/nmdc_wfmgas-11-17q7g587.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb nmdc:dobj-11-a3cw2680 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-17q7g587.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84aaf5070762e47f15b2d54581545ae9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84aaf5070762e47f15b2d54581545ae9 nmdc:dobj-11-xk78fm34 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-17q7g587.1/nmdc_wfmgas-11-17q7g587.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84aaf5070762e47f15b2d54581545ae9 nmdc:dobj-11-0hscyw17 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-17q7g587.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16f600725c836803f8a3cc62ec884669 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16f600725c836803f8a3cc62ec884669 nmdc:dobj-11-vhnqhk38 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-17q7g587.1/nmdc_wfmgas-11-17q7g587.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16f600725c836803f8a3cc62ec884669 nmdc:dobj-11-kmnxe764 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfmgas-11-cy6aed55.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-17q7g587.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfmgas-11-17q7g587.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-07688c39 -INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jjyz3b39.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1 +INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ebm9fj52.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:257e2026c3edbe6bb07c5e97d47fa33a -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:257e2026c3edbe6bb07c5e97d47fa33a nmdc:dobj-11-mdqy8n94 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:257e2026c3edbe6bb07c5e97d47fa33a nmdc:dobj-11-eewfpg53 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7792943f7c8945b0bb5ac090138dc47 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7792943f7c8945b0bb5ac090138dc47 nmdc:dobj-11-4xszmz26 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7792943f7c8945b0bb5ac090138dc47 nmdc:dobj-11-mbfe0t36 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b62a2b2be1c8f92ae1350b08ee06b8c -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b62a2b2be1c8f92ae1350b08ee06b8c nmdc:dobj-11-dn6x7960 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b62a2b2be1c8f92ae1350b08ee06b8c nmdc:dobj-11-rt4fe678 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd0e56f9403edd807ddb8ac2058df494 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd0e56f9403edd807ddb8ac2058df494 nmdc:dobj-11-f7c94905 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd0e56f9403edd807ddb8ac2058df494 nmdc:dobj-11-0pn93a30 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d nmdc:dobj-11-tsppzg30 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d nmdc:dobj-11-ybwp4845 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4db292aa09f3bd8064dd7898f2b1d33f -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4db292aa09f3bd8064dd7898f2b1d33f nmdc:dobj-11-aj3xh359 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4db292aa09f3bd8064dd7898f2b1d33f nmdc:dobj-11-a6753203 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c23a5200a4850523bf1b71eb2df31cb9 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c23a5200a4850523bf1b71eb2df31cb9 nmdc:dobj-11-yt384426 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c23a5200a4850523bf1b71eb2df31cb9 nmdc:dobj-11-yspq8111 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ce3f4a57144426843cb82a9c36c23f9 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ce3f4a57144426843cb82a9c36c23f9 nmdc:dobj-11-f6m7tj95 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ce3f4a57144426843cb82a9c36c23f9 nmdc:dobj-11-6re2cp80 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22ae2a542b60fd0a56c098eef57d0a6d -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22ae2a542b60fd0a56c098eef57d0a6d nmdc:dobj-11-57b12w61 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-ebm9fj52.1/nmdc_wfrbt-11-ebm9fj52.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22ae2a542b60fd0a56c098eef57d0a6d nmdc:dobj-11-g06jmn81 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfrbt-11-jjyz3b39.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebm9fj52.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfrbt-11-ebm9fj52.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-07688c39 INFO:root:omics_processing_id: nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5b5e247913c5cdb5511dff98d349ce2 nmdc:dobj-11-wbg30737 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5b5e247913c5cdb5511dff98d349ce2 nmdc:dobj-11-2khqx384 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-6q7gzb26 -INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zd95qq68.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-zd95qq68.1 +INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9b1x7652.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9b1x7652.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2429c25a417bf079f40db7740183c833 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-zd95qq68.1/nmdc_wfrqc-11-zd95qq68.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2429c25a417bf079f40db7740183c833 nmdc:dobj-11-h43cjx23 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-9b1x7652.1/nmdc_wfrqc-11-9b1x7652.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2429c25a417bf079f40db7740183c833 nmdc:dobj-11-mge8f957 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zd95qq68.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfrqc-11-zd95qq68.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9b1x7652.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfrqc-11-9b1x7652.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-6q7gzb26 -INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hzsb8y98.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1 +INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5t6sg509.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-5t6sg509.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1da0fbcf3afbbfc32bf938ee99f6d01e -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1da0fbcf3afbbfc32bf938ee99f6d01e nmdc:dobj-11-fp4pnk94 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-5t6sg509.1/nmdc_wfmgas-11-5t6sg509.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1da0fbcf3afbbfc32bf938ee99f6d01e nmdc:dobj-11-x9bd5252 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5t6sg509.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bc422981525ab9157c3208633b332fb4 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bc422981525ab9157c3208633b332fb4 nmdc:dobj-11-b545gt97 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-5t6sg509.1/nmdc_wfmgas-11-5t6sg509.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bc422981525ab9157c3208633b332fb4 nmdc:dobj-11-hdwzeh08 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5t6sg509.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c7278c2de111b4ee333e3c0bef8edd6c -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7278c2de111b4ee333e3c0bef8edd6c nmdc:dobj-11-8z3kz971 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-5t6sg509.1/nmdc_wfmgas-11-5t6sg509.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7278c2de111b4ee333e3c0bef8edd6c nmdc:dobj-11-4qyfj565 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5t6sg509.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6ddc048297ca0e8ac05ca27697d05a43 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ddc048297ca0e8ac05ca27697d05a43 nmdc:dobj-11-3zzr0h09 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-5t6sg509.1/nmdc_wfmgas-11-5t6sg509.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ddc048297ca0e8ac05ca27697d05a43 nmdc:dobj-11-rgfsr715 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5t6sg509.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:328dbf8d5b36a966e33f6e58bf429850 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:328dbf8d5b36a966e33f6e58bf429850 nmdc:dobj-11-9zbd1s45 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-5t6sg509.1/nmdc_wfmgas-11-5t6sg509.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:328dbf8d5b36a966e33f6e58bf429850 nmdc:dobj-11-9v7ecx29 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfmgas-11-hzsb8y98.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5t6sg509.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfmgas-11-5t6sg509.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-6q7gzb26 -INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vg2dn032.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1 +INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1z617x16.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47ef66b14c923740694c368b2f34bb36 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47ef66b14c923740694c368b2f34bb36 nmdc:dobj-11-sxadzh80 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47ef66b14c923740694c368b2f34bb36 nmdc:dobj-11-f65myb17 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60d3c830723011c4663fc54d3b9ae8c2 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60d3c830723011c4663fc54d3b9ae8c2 nmdc:dobj-11-vfmzjt62 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60d3c830723011c4663fc54d3b9ae8c2 nmdc:dobj-11-h12cty28 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c2d98178b8c9f57abb06a362726ae64b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2d98178b8c9f57abb06a362726ae64b nmdc:dobj-11-b58cwm82 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2d98178b8c9f57abb06a362726ae64b nmdc:dobj-11-eegwj738 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:99c2b08cc001838f05c50dea136449a4 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99c2b08cc001838f05c50dea136449a4 nmdc:dobj-11-jf6nxh37 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99c2b08cc001838f05c50dea136449a4 nmdc:dobj-11-2f5rnd84 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c8cadd89f3b28a31a7b72eceae2274c -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c8cadd89f3b28a31a7b72eceae2274c nmdc:dobj-11-8jm70447 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c8cadd89f3b28a31a7b72eceae2274c nmdc:dobj-11-7nyc6w39 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b1b076e94e33b1417cf8ba0df8ed51f -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b1b076e94e33b1417cf8ba0df8ed51f nmdc:dobj-11-v4qk5976 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b1b076e94e33b1417cf8ba0df8ed51f nmdc:dobj-11-bvzwph85 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86bfc9d51061a804c95430240541b5ae -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bfc9d51061a804c95430240541b5ae nmdc:dobj-11-nxk7b575 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bfc9d51061a804c95430240541b5ae nmdc:dobj-11-8jfanz07 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f54d6d4971f33c2e6018c7cc01d70c54 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f54d6d4971f33c2e6018c7cc01d70c54 nmdc:dobj-11-0ws3mz94 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f54d6d4971f33c2e6018c7cc01d70c54 nmdc:dobj-11-pgy18d11 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88596ee0da2e8edd19fd39c208757bd2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88596ee0da2e8edd19fd39c208757bd2 nmdc:dobj-11-da9qp464 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-1z617x16.1/nmdc_wfrbt-11-1z617x16.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88596ee0da2e8edd19fd39c208757bd2 nmdc:dobj-11-2ecnxc07 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfrbt-11-vg2dn032.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1z617x16.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfrbt-11-1z617x16.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-6q7gzb26 INFO:root:omics_processing_id: nmdc:omprc-11-pbwhv175 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5333beedf0b1a6aeac85fd52e0c954a6 nmdc:dobj-11-4fsmya96 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5333beedf0b1a6aeac85fd52e0c954a6 nmdc:dobj-11-bdw71g67 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-pbwhv175 -INFO:root:New activity id created for nmdc:omprc-11-pbwhv175 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-d64a9e86.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfrqc-11-d64a9e86.1 +INFO:root:New activity id created for nmdc:omprc-11-pbwhv175 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-n7fkg174.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfrqc-11-n7fkg174.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3615e5d3379aae0d85bd244bb25b42a7 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfrqc-11-d64a9e86.1/nmdc_wfrqc-11-d64a9e86.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3615e5d3379aae0d85bd244bb25b42a7 nmdc:dobj-11-878b5615 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfrqc-11-n7fkg174.1/nmdc_wfrqc-11-n7fkg174.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3615e5d3379aae0d85bd244bb25b42a7 nmdc:dobj-11-gv3vw859 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-pbwhv175 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d64a9e86.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n7fkg174.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5152db67096ea0f81fb877973aba00f -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfrqc-11-d64a9e86.1/nmdc_wfrqc-11-d64a9e86.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5152db67096ea0f81fb877973aba00f nmdc:dobj-11-x1qprj36 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfrqc-11-n7fkg174.1/nmdc_wfrqc-11-n7fkg174.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5152db67096ea0f81fb877973aba00f nmdc:dobj-11-te131r81 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pbwhv175 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d64a9e86.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:613c66031f3a5c73716b02ade1cef55a nmdc:wfrqc-11-d64a9e86.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n7fkg174.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:613c66031f3a5c73716b02ade1cef55a nmdc:wfrqc-11-n7fkg174.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-pbwhv175 -INFO:root:New activity id created for nmdc:omprc-11-pbwhv175 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yhk5cc67.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1 +INFO:root:New activity id created for nmdc:omprc-11-pbwhv175 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-05t5gy43.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-05t5gy43.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:28f86aa5f580484f8e6a8c86fccb5810 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28f86aa5f580484f8e6a8c86fccb5810 nmdc:dobj-11-07smrm83 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-05t5gy43.1/nmdc_wfmgas-11-05t5gy43.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28f86aa5f580484f8e6a8c86fccb5810 nmdc:dobj-11-fehb4628 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-pbwhv175 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-05t5gy43.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df3e85ecef6137d5317d4993902353dd -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df3e85ecef6137d5317d4993902353dd nmdc:dobj-11-tb9c4f12 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-05t5gy43.1/nmdc_wfmgas-11-05t5gy43.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df3e85ecef6137d5317d4993902353dd nmdc:dobj-11-cgg4vj71 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-pbwhv175 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-05t5gy43.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e288183958c6d58c8e30c89e10eb4ae7 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e288183958c6d58c8e30c89e10eb4ae7 nmdc:dobj-11-xr81eq55 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-05t5gy43.1/nmdc_wfmgas-11-05t5gy43.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e288183958c6d58c8e30c89e10eb4ae7 nmdc:dobj-11-netdd641 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pbwhv175 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-05t5gy43.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37161ecacc5fc6ec47914e6fff906a80 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37161ecacc5fc6ec47914e6fff906a80 nmdc:dobj-11-ex5hrq41 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-05t5gy43.1/nmdc_wfmgas-11-05t5gy43.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37161ecacc5fc6ec47914e6fff906a80 nmdc:dobj-11-44575549 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-pbwhv175 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-05t5gy43.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b28dcf7c7b102b69889cbbedf4baa355 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b28dcf7c7b102b69889cbbedf4baa355 nmdc:dobj-11-5whtpg87 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-05t5gy43.1/nmdc_wfmgas-11-05t5gy43.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b28dcf7c7b102b69889cbbedf4baa355 nmdc:dobj-11-32rpph14 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-pbwhv175 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:613c66031f3a5c73716b02ade1cef55a nmdc:wfmgas-11-yhk5cc67.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-05t5gy43.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:613c66031f3a5c73716b02ade1cef55a nmdc:wfmgas-11-05t5gy43.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-pbwhv175 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-pbwhv175 INFO:root:omics_processing_id: nmdc:omprc-11-gb5k8p40 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9676ebc038756ae55077770846391495 nmdc:dobj-11-s22yhg85 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9676ebc038756ae55077770846391495 nmdc:dobj-11-zy5kwg20 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gb5k8p40 -INFO:root:New activity id created for nmdc:omprc-11-gb5k8p40 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-01kc2n71.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-01kc2n71.1 +INFO:root:New activity id created for nmdc:omprc-11-gb5k8p40 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-1w6ydt43.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-1w6ydt43.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:035767058c43f56c7df73c2420e8fcd1 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-01kc2n71.1/nmdc_wfrqc-11-01kc2n71.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:035767058c43f56c7df73c2420e8fcd1 nmdc:dobj-11-q3pj8b78 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-1w6ydt43.1/nmdc_wfrqc-11-1w6ydt43.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:035767058c43f56c7df73c2420e8fcd1 nmdc:dobj-11-mk8e7m24 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gb5k8p40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-01kc2n71.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1w6ydt43.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c18b2f187dfeb5e12c74aa3b5757825 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-01kc2n71.1/nmdc_wfrqc-11-01kc2n71.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c18b2f187dfeb5e12c74aa3b5757825 nmdc:dobj-11-szh3zx66 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-1w6ydt43.1/nmdc_wfrqc-11-1w6ydt43.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c18b2f187dfeb5e12c74aa3b5757825 nmdc:dobj-11-bk4jdt64 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gb5k8p40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-01kc2n71.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f nmdc:wfrqc-11-01kc2n71.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1w6ydt43.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f nmdc:wfrqc-11-1w6ydt43.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gb5k8p40 -INFO:root:New activity id created for nmdc:omprc-11-gb5k8p40 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3j3zy491.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1 +INFO:root:New activity id created for nmdc:omprc-11-gb5k8p40 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-35t25c08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-35t25c08.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9c1313dfb5523d45f828410e805dedc -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9c1313dfb5523d45f828410e805dedc nmdc:dobj-11-dprqgm22 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-35t25c08.1/nmdc_wfmgas-11-35t25c08.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9c1313dfb5523d45f828410e805dedc nmdc:dobj-11-0ekgf235 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gb5k8p40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-35t25c08.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:913d2163dd05fab3fc0d9a829a1f91d0 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:913d2163dd05fab3fc0d9a829a1f91d0 nmdc:dobj-11-0eswps02 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-35t25c08.1/nmdc_wfmgas-11-35t25c08.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:913d2163dd05fab3fc0d9a829a1f91d0 nmdc:dobj-11-tpdp0j46 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gb5k8p40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-35t25c08.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cecd611724e7889fb632c205f67b85cd -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cecd611724e7889fb632c205f67b85cd nmdc:dobj-11-t02f3457 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-35t25c08.1/nmdc_wfmgas-11-35t25c08.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cecd611724e7889fb632c205f67b85cd nmdc:dobj-11-08a53657 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gb5k8p40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-35t25c08.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94d4aa6301b03d885c76019351617a45 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94d4aa6301b03d885c76019351617a45 nmdc:dobj-11-wdkkdq58 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-35t25c08.1/nmdc_wfmgas-11-35t25c08.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94d4aa6301b03d885c76019351617a45 nmdc:dobj-11-jx64ab16 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gb5k8p40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-35t25c08.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3deb0d9239ccc9a6603327b7bebb5dbb -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3deb0d9239ccc9a6603327b7bebb5dbb nmdc:dobj-11-3kw68k71 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-35t25c08.1/nmdc_wfmgas-11-35t25c08.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3deb0d9239ccc9a6603327b7bebb5dbb nmdc:dobj-11-ds7vap39 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gb5k8p40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f nmdc:wfmgas-11-3j3zy491.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-35t25c08.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f nmdc:wfmgas-11-35t25c08.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gb5k8p40 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gb5k8p40 INFO:root:omics_processing_id: nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0df5ac2c9052a2b45cfd9578aaa562f7 nmdc:dobj-11-n3zafb12 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0df5ac2c9052a2b45cfd9578aaa562f7 nmdc:dobj-11-6mpr3c48 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-xhnf2e85 -INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9nmza498.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-9nmza498.1 +INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8qmmdd68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-8qmmdd68.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42470018e775d9dc001d00d35eed7266 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-9nmza498.1/nmdc_wfrqc-11-9nmza498.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42470018e775d9dc001d00d35eed7266 nmdc:dobj-11-16sj4n20 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-8qmmdd68.1/nmdc_wfrqc-11-8qmmdd68.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42470018e775d9dc001d00d35eed7266 nmdc:dobj-11-e4c6x882 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9nmza498.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8qmmdd68.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb2b03b041c125d2fec7729976367d66 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-9nmza498.1/nmdc_wfrqc-11-9nmza498.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb2b03b041c125d2fec7729976367d66 nmdc:dobj-11-m5enby22 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-8qmmdd68.1/nmdc_wfrqc-11-8qmmdd68.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb2b03b041c125d2fec7729976367d66 nmdc:dobj-11-kwmwjb20 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9nmza498.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfrqc-11-9nmza498.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8qmmdd68.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfrqc-11-8qmmdd68.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-xhnf2e85 -INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vekpjr35.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1 +INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-23b05v89.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-23b05v89.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7ef26cb6f3ea8041c48ec69200f06f9 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7ef26cb6f3ea8041c48ec69200f06f9 nmdc:dobj-11-qyzbgk32 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-23b05v89.1/nmdc_wfmgas-11-23b05v89.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7ef26cb6f3ea8041c48ec69200f06f9 nmdc:dobj-11-7r0ebr95 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-23b05v89.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34c609c839345bb3b08a53c19681bf64 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34c609c839345bb3b08a53c19681bf64 nmdc:dobj-11-a54dbp63 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-23b05v89.1/nmdc_wfmgas-11-23b05v89.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34c609c839345bb3b08a53c19681bf64 nmdc:dobj-11-8rkqh814 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-23b05v89.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c313ddb8f3093a92880762319e44582 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c313ddb8f3093a92880762319e44582 nmdc:dobj-11-fbt51391 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-23b05v89.1/nmdc_wfmgas-11-23b05v89.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c313ddb8f3093a92880762319e44582 nmdc:dobj-11-gygkyh38 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-23b05v89.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03bf9b7496d0e06b73981e24e77e846b -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03bf9b7496d0e06b73981e24e77e846b nmdc:dobj-11-12sf7j08 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-23b05v89.1/nmdc_wfmgas-11-23b05v89.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03bf9b7496d0e06b73981e24e77e846b nmdc:dobj-11-726rfv63 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-23b05v89.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:342fad07e0559d930a7946f9470b9108 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:342fad07e0559d930a7946f9470b9108 nmdc:dobj-11-s8md3h97 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-23b05v89.1/nmdc_wfmgas-11-23b05v89.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:342fad07e0559d930a7946f9470b9108 nmdc:dobj-11-wxxd6m23 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfmgas-11-vekpjr35.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-23b05v89.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfmgas-11-23b05v89.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-xhnf2e85 -INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-cjjd1x81.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1 +INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-fmdbqr57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d nmdc:dobj-11-x17fp940 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d nmdc:dobj-11-xvjjyg55 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a701444fa38828c5e0d8e91c25042a19 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a701444fa38828c5e0d8e91c25042a19 nmdc:dobj-11-yndsr359 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a701444fa38828c5e0d8e91c25042a19 nmdc:dobj-11-095a6h93 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:663b83cb3df49f525de52ae963570a18 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:663b83cb3df49f525de52ae963570a18 nmdc:dobj-11-9g62x378 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:663b83cb3df49f525de52ae963570a18 nmdc:dobj-11-7r8r8r68 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cc4b117ac9f1d11bb908f5ad8e51567 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cc4b117ac9f1d11bb908f5ad8e51567 nmdc:dobj-11-yegsja29 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cc4b117ac9f1d11bb908f5ad8e51567 nmdc:dobj-11-hazxz422 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 nmdc:dobj-11-kjrk8r79 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 nmdc:dobj-11-dy75bh37 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ee5d7b361966acd41d3026be09f6153 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ee5d7b361966acd41d3026be09f6153 nmdc:dobj-11-67xeft19 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ee5d7b361966acd41d3026be09f6153 nmdc:dobj-11-r7xfv443 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6e04f5f38c4b5bba26ffff78245aa752 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e04f5f38c4b5bba26ffff78245aa752 nmdc:dobj-11-fb6mt204 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e04f5f38c4b5bba26ffff78245aa752 nmdc:dobj-11-s18c2e36 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62fa4c63db827ce9f26ca242f04d6ee7 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62fa4c63db827ce9f26ca242f04d6ee7 nmdc:dobj-11-fj2dhe72 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62fa4c63db827ce9f26ca242f04d6ee7 nmdc:dobj-11-rvyf4n51 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10c60ea0bc3112617748a056e3d10884 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10c60ea0bc3112617748a056e3d10884 nmdc:dobj-11-kspabv36 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-fmdbqr57.1/nmdc_wfrbt-11-fmdbqr57.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10c60ea0bc3112617748a056e3d10884 nmdc:dobj-11-hh1nc923 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfrbt-11-cjjd1x81.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fmdbqr57.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfrbt-11-fmdbqr57.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-xhnf2e85 INFO:root:omics_processing_id: nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:492b743dc4a3ab1c730dd0e12912d8d1 nmdc:dobj-11-2r6z9b97 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:492b743dc4a3ab1c730dd0e12912d8d1 nmdc:dobj-11-25p7pv15 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-t4hk7066 -INFO:root:New activity id created for nmdc:omprc-11-t4hk7066 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-k7wdz881.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrqc-11-k7wdz881.1 +INFO:root:New activity id created for nmdc:omprc-11-t4hk7066 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ry5m0t49.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrqc-11-ry5m0t49.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe83d2ab1225fd3abda2237f39367869 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrqc-11-k7wdz881.1/nmdc_wfrqc-11-k7wdz881.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe83d2ab1225fd3abda2237f39367869 nmdc:dobj-11-q1wc7z88 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrqc-11-ry5m0t49.1/nmdc_wfrqc-11-ry5m0t49.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe83d2ab1225fd3abda2237f39367869 nmdc:dobj-11-s3wh8f79 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k7wdz881.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ry5m0t49.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5fc6a53327d5f178b364a2b3db46c59 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrqc-11-k7wdz881.1/nmdc_wfrqc-11-k7wdz881.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5fc6a53327d5f178b364a2b3db46c59 nmdc:dobj-11-bten2f14 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrqc-11-ry5m0t49.1/nmdc_wfrqc-11-ry5m0t49.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5fc6a53327d5f178b364a2b3db46c59 nmdc:dobj-11-02cy1n56 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k7wdz881.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d2646debbfc0164979d65b81bf59d8c9 nmdc:wfrqc-11-k7wdz881.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ry5m0t49.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d2646debbfc0164979d65b81bf59d8c9 nmdc:wfrqc-11-ry5m0t49.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-t4hk7066 -INFO:root:New activity id created for nmdc:omprc-11-t4hk7066 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-9x5z1117.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-9x5z1117.1 +INFO:root:New activity id created for nmdc:omprc-11-t4hk7066 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-1yxxm817.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-1yxxm817.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c2f66045a0f7470391fc964ce3e67f48 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-9x5z1117.1/nmdc_wfmgas-11-9x5z1117.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2f66045a0f7470391fc964ce3e67f48 nmdc:dobj-11-dtpqjq29 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-1yxxm817.1/nmdc_wfmgas-11-1yxxm817.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2f66045a0f7470391fc964ce3e67f48 nmdc:dobj-11-4hja2237 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9x5z1117.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1yxxm817.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79879e11dee1f55621d2ec764bdd4585 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-9x5z1117.1/nmdc_wfmgas-11-9x5z1117.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79879e11dee1f55621d2ec764bdd4585 nmdc:dobj-11-4gqzfc10 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-1yxxm817.1/nmdc_wfmgas-11-1yxxm817.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79879e11dee1f55621d2ec764bdd4585 nmdc:dobj-11-v7r6mx03 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9x5z1117.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1yxxm817.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3774175616272168095e2ffe2833cdc9 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-9x5z1117.1/nmdc_wfmgas-11-9x5z1117.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3774175616272168095e2ffe2833cdc9 nmdc:dobj-11-zsyq0h05 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-1yxxm817.1/nmdc_wfmgas-11-1yxxm817.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3774175616272168095e2ffe2833cdc9 nmdc:dobj-11-430adh59 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9x5z1117.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1yxxm817.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d60dc00d8089ccc9770a3cf19362fb7c -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-9x5z1117.1/nmdc_wfmgas-11-9x5z1117.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d60dc00d8089ccc9770a3cf19362fb7c nmdc:dobj-11-swxatf59 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-1yxxm817.1/nmdc_wfmgas-11-1yxxm817.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d60dc00d8089ccc9770a3cf19362fb7c nmdc:dobj-11-ycw6ep65 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9x5z1117.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1yxxm817.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43ec0c58f402d6f030f5815380870c17 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-9x5z1117.1/nmdc_wfmgas-11-9x5z1117.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43ec0c58f402d6f030f5815380870c17 nmdc:dobj-11-w4cc2w77 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-1yxxm817.1/nmdc_wfmgas-11-1yxxm817.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43ec0c58f402d6f030f5815380870c17 nmdc:dobj-11-v3j31g63 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9x5z1117.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d2646debbfc0164979d65b81bf59d8c9 nmdc:wfmgas-11-9x5z1117.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1yxxm817.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d2646debbfc0164979d65b81bf59d8c9 nmdc:wfmgas-11-1yxxm817.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-t4hk7066 -INFO:root:New activity id created for nmdc:omprc-11-t4hk7066 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-64f3nw32.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1 +INFO:root:New activity id created for nmdc:omprc-11-t4hk7066 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-b97tg064.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db4d41216a837e140d5974241bfe4c8c -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db4d41216a837e140d5974241bfe4c8c nmdc:dobj-11-rzqyhv76 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db4d41216a837e140d5974241bfe4c8c nmdc:dobj-11-j0z0zt87 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4551b05f4691e200074eba9c269957a1 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4551b05f4691e200074eba9c269957a1 nmdc:dobj-11-3v32w563 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4551b05f4691e200074eba9c269957a1 nmdc:dobj-11-x2rxs836 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91df102105d5bfd59f299da88dfff9d3 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91df102105d5bfd59f299da88dfff9d3 nmdc:dobj-11-w0rehb54 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91df102105d5bfd59f299da88dfff9d3 nmdc:dobj-11-hgjkr352 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab5b836ecf40570430ee3feab915df37 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab5b836ecf40570430ee3feab915df37 nmdc:dobj-11-n31tfk44 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab5b836ecf40570430ee3feab915df37 nmdc:dobj-11-f823ng27 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:67b8e2a863e637123646ee6a635ef783 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:67b8e2a863e637123646ee6a635ef783 nmdc:dobj-11-1aasf309 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:67b8e2a863e637123646ee6a635ef783 nmdc:dobj-11-se9tm170 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:498f456b63f8c718ec9ea353d655830d -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:498f456b63f8c718ec9ea353d655830d nmdc:dobj-11-bmxqxs23 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:498f456b63f8c718ec9ea353d655830d nmdc:dobj-11-t8m83z95 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b9d33d6db6043274c8b60d086078d2b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b9d33d6db6043274c8b60d086078d2b nmdc:dobj-11-gcj2m937 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b9d33d6db6043274c8b60d086078d2b nmdc:dobj-11-x013rc22 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dff52f085f09868fc1ad1ace14531279 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dff52f085f09868fc1ad1ace14531279 nmdc:dobj-11-hf660j04 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dff52f085f09868fc1ad1ace14531279 nmdc:dobj-11-3ycsfs91 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a20dae35d1650215bc907ba60821b935 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a20dae35d1650215bc907ba60821b935 nmdc:dobj-11-cbemzt60 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-b97tg064.1/nmdc_wfrbt-11-b97tg064.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a20dae35d1650215bc907ba60821b935 nmdc:dobj-11-c9w1ra91 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d2646debbfc0164979d65b81bf59d8c9 nmdc:wfrbt-11-64f3nw32.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b97tg064.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d2646debbfc0164979d65b81bf59d8c9 nmdc:wfrbt-11-b97tg064.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-t4hk7066 INFO:root:omics_processing_id: nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:259a1435146041ed02aa079a007fb06c nmdc:dobj-11-w3j5t303 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:259a1435146041ed02aa079a007fb06c nmdc:dobj-11-5cvbd183 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-f0qnth40 -INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0a61s396.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-0a61s396.1 +INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hgkqfd98.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-hgkqfd98.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac7f371fdf371a8ea7bc4da5a26aa248 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-0a61s396.1/nmdc_wfrqc-11-0a61s396.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac7f371fdf371a8ea7bc4da5a26aa248 nmdc:dobj-11-4srnsb80 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-hgkqfd98.1/nmdc_wfrqc-11-hgkqfd98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac7f371fdf371a8ea7bc4da5a26aa248 nmdc:dobj-11-kh5t6f96 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0a61s396.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hgkqfd98.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f3feb05dca2a847527c507d339a5053 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-0a61s396.1/nmdc_wfrqc-11-0a61s396.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f3feb05dca2a847527c507d339a5053 nmdc:dobj-11-5vgabf16 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-hgkqfd98.1/nmdc_wfrqc-11-hgkqfd98.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f3feb05dca2a847527c507d339a5053 nmdc:dobj-11-aqrjhz85 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0a61s396.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfrqc-11-0a61s396.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hgkqfd98.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfrqc-11-hgkqfd98.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-f0qnth40 -INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yd6qv840.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1 +INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3rakv471.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-3rakv471.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 nmdc:dobj-11-3yfbqn19 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-3rakv471.1/nmdc_wfmgas-11-3rakv471.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 nmdc:dobj-11-9n0zjp39 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3rakv471.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b143c3b4d83f74c3a8e485ab854244c -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b143c3b4d83f74c3a8e485ab854244c nmdc:dobj-11-a22z2e18 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-3rakv471.1/nmdc_wfmgas-11-3rakv471.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b143c3b4d83f74c3a8e485ab854244c nmdc:dobj-11-9yf3ba14 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3rakv471.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f87ff508c3fdb000f68e7cc4be00fc9a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f87ff508c3fdb000f68e7cc4be00fc9a nmdc:dobj-11-h366jf53 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-3rakv471.1/nmdc_wfmgas-11-3rakv471.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f87ff508c3fdb000f68e7cc4be00fc9a nmdc:dobj-11-v4t38m84 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3rakv471.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:678089696cb48800280025efbaa9d8e9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:678089696cb48800280025efbaa9d8e9 nmdc:dobj-11-nqtcz756 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-3rakv471.1/nmdc_wfmgas-11-3rakv471.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:678089696cb48800280025efbaa9d8e9 nmdc:dobj-11-xwrqc939 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3rakv471.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e68f1da7de72154b54911586a6642016 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e68f1da7de72154b54911586a6642016 nmdc:dobj-11-8bp0sn31 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-3rakv471.1/nmdc_wfmgas-11-3rakv471.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e68f1da7de72154b54911586a6642016 nmdc:dobj-11-zr40yj44 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfmgas-11-yd6qv840.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3rakv471.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfmgas-11-3rakv471.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-f0qnth40 -INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gz4na728.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1 +INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-w5bve387.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b60788f3b1d03f3990aac1e179f3b3a0 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b60788f3b1d03f3990aac1e179f3b3a0 nmdc:dobj-11-g4wvdg38 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b60788f3b1d03f3990aac1e179f3b3a0 nmdc:dobj-11-k1rht217 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 nmdc:dobj-11-8grt4r75 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 nmdc:dobj-11-ebm35y08 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d94983c3f334998b63c881da4063a5b4 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94983c3f334998b63c881da4063a5b4 nmdc:dobj-11-stze3e20 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94983c3f334998b63c881da4063a5b4 nmdc:dobj-11-8wp6bj09 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:efb94c49864f43e751a74fa5967b2007 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efb94c49864f43e751a74fa5967b2007 nmdc:dobj-11-vw8v2s09 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efb94c49864f43e751a74fa5967b2007 nmdc:dobj-11-cbegw880 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25bba5aeb0e33c372fead03b587a2098 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25bba5aeb0e33c372fead03b587a2098 nmdc:dobj-11-c9pwyp19 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25bba5aeb0e33c372fead03b587a2098 nmdc:dobj-11-q13vt979 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d60f7d7173f99100d51e6d3a7a6f7153 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d60f7d7173f99100d51e6d3a7a6f7153 nmdc:dobj-11-efh21410 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d60f7d7173f99100d51e6d3a7a6f7153 nmdc:dobj-11-9tsazm64 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b576e70a64c5094d84a12532c977d57b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b576e70a64c5094d84a12532c977d57b nmdc:dobj-11-6pdtd994 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b576e70a64c5094d84a12532c977d57b nmdc:dobj-11-pm2wpx33 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82d8ed24c5b9abfc452aae9917021ccd -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82d8ed24c5b9abfc452aae9917021ccd nmdc:dobj-11-e9pzwp28 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82d8ed24c5b9abfc452aae9917021ccd nmdc:dobj-11-q4sa2284 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 nmdc:dobj-11-pg03yr93 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-w5bve387.1/nmdc_wfrbt-11-w5bve387.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 nmdc:dobj-11-4sa81g33 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfrbt-11-gz4na728.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w5bve387.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfrbt-11-w5bve387.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-f0qnth40 INFO:root:omics_processing_id: nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1852a6601023d802e67f41aef7dfcde nmdc:dobj-11-y9z70074 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1852a6601023d802e67f41aef7dfcde nmdc:dobj-11-ggwby248 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-36m85r16 -INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-b0r39692.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-b0r39692.1 +INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sw7je421.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-sw7je421.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9563eed4d85815831dfcf8b8ea651ee4 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-b0r39692.1/nmdc_wfrqc-11-b0r39692.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9563eed4d85815831dfcf8b8ea651ee4 nmdc:dobj-11-zgzem489 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-sw7je421.1/nmdc_wfrqc-11-sw7je421.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9563eed4d85815831dfcf8b8ea651ee4 nmdc:dobj-11-ny4enb45 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b0r39692.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sw7je421.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37cbca8544d40c5cff4d0fe368c40cc7 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-b0r39692.1/nmdc_wfrqc-11-b0r39692.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37cbca8544d40c5cff4d0fe368c40cc7 nmdc:dobj-11-ma8pbq49 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-sw7je421.1/nmdc_wfrqc-11-sw7je421.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37cbca8544d40c5cff4d0fe368c40cc7 nmdc:dobj-11-gxgrxv88 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b0r39692.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfrqc-11-b0r39692.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sw7je421.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfrqc-11-sw7je421.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-36m85r16 -INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-a2exa458.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1 +INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-34r7qj78.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-34r7qj78.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e8c101a054656ec574f23b925894f2dd -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8c101a054656ec574f23b925894f2dd nmdc:dobj-11-gc8gxv94 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-34r7qj78.1/nmdc_wfmgas-11-34r7qj78.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8c101a054656ec574f23b925894f2dd nmdc:dobj-11-hkthyx03 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-34r7qj78.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd63d67a3005f9ef6b7a2c18e10ffe7f -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3f36588145928a2fd22d040d6895239 nmdc:dobj-11-j4b2hb97 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-34r7qj78.1/nmdc_wfmgas-11-34r7qj78.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3f36588145928a2fd22d040d6895239 nmdc:dobj-11-mthsar48 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-34r7qj78.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d nmdc:dobj-11-ff5r2s10 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-34r7qj78.1/nmdc_wfmgas-11-34r7qj78.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d nmdc:dobj-11-y2xm1218 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-34r7qj78.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d125b2c61a4c6e264cc66e62e67b871a -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d125b2c61a4c6e264cc66e62e67b871a nmdc:dobj-11-nppc9y58 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-34r7qj78.1/nmdc_wfmgas-11-34r7qj78.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d125b2c61a4c6e264cc66e62e67b871a nmdc:dobj-11-sdsy9z09 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfmgas-11-a2exa458.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-34r7qj78.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6dcaa2bab4c2fff6ba5b7b869896660 nmdc:dobj-11-s0y5yw34 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-cfjx8t81.1/nmdc_wfrbt-11-cfjx8t81.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6dcaa2bab4c2fff6ba5b7b869896660 nmdc:dobj-11-n3p3vt45 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cfjx8t81.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12247816b11fcb66edec5d823e6936eb -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12247816b11fcb66edec5d823e6936eb nmdc:dobj-11-jk6d0119 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-cfjx8t81.1/nmdc_wfrbt-11-cfjx8t81.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12247816b11fcb66edec5d823e6936eb nmdc:dobj-11-emg04t30 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cfjx8t81.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9caf84609b9ec4098a2d3467a1d9111b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9caf84609b9ec4098a2d3467a1d9111b nmdc:dobj-11-qxbbsh52 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-cfjx8t81.1/nmdc_wfrbt-11-cfjx8t81.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9caf84609b9ec4098a2d3467a1d9111b nmdc:dobj-11-34wxqv98 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cfjx8t81.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:279a423a9e0402eaafd7fb1ea4e30457 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:279a423a9e0402eaafd7fb1ea4e30457 nmdc:dobj-11-aethhz32 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-cfjx8t81.1/nmdc_wfrbt-11-cfjx8t81.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:279a423a9e0402eaafd7fb1ea4e30457 nmdc:dobj-11-cwyf5s47 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cfjx8t81.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ce6833391d9bd0639e5476ecee4a14b3 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce6833391d9bd0639e5476ecee4a14b3 nmdc:dobj-11-km6sc309 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-cfjx8t81.1/nmdc_wfrbt-11-cfjx8t81.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce6833391d9bd0639e5476ecee4a14b3 nmdc:dobj-11-fm6fcc26 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cfjx8t81.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:736a8509c72de5b9fa0f913b8a1b87cb -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d13caca51ed3fa89814f24305ea38d nmdc:dobj-11-0h6w7j92 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-cfjx8t81.1/nmdc_wfrbt-11-cfjx8t81.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d13caca51ed3fa89814f24305ea38d nmdc:dobj-11-zzgtp280 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cfjx8t81.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdd7dfb77cb680bb57d7bd3570c94854 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdd7dfb77cb680bb57d7bd3570c94854 nmdc:dobj-11-jyb4wj71 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-cfjx8t81.1/nmdc_wfrbt-11-cfjx8t81.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdd7dfb77cb680bb57d7bd3570c94854 nmdc:dobj-11-qejx5s68 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cfjx8t81.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:28593bff3c397004b8d010ff71e4f691 -INFO:root:New file 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-rxe0de59.1/nmdc_wfmgas-11-rxe0de59.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48847c047bb1832a1bb60521492690f9 nmdc:dobj-11-1kmtp435 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-x3cnyj59.1/nmdc_wfmgas-11-x3cnyj59.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48847c047bb1832a1bb60521492690f9 nmdc:dobj-11-hh5mmy55 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxe0de59.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3cnyj59.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24cc168e055aee129e3a86dab70805f3 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-rxe0de59.1/nmdc_wfmgas-11-rxe0de59.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24cc168e055aee129e3a86dab70805f3 nmdc:dobj-11-qxb6zz50 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-x3cnyj59.1/nmdc_wfmgas-11-x3cnyj59.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24cc168e055aee129e3a86dab70805f3 nmdc:dobj-11-7hj25a69 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxe0de59.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3cnyj59.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:14a7236ef319a67e5107ad79a15b531c -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-rxe0de59.1/nmdc_wfmgas-11-rxe0de59.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14a7236ef319a67e5107ad79a15b531c nmdc:dobj-11-08fpp520 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-x3cnyj59.1/nmdc_wfmgas-11-x3cnyj59.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14a7236ef319a67e5107ad79a15b531c nmdc:dobj-11-9t233667 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxe0de59.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3cnyj59.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25278dea8043e4e93c34feeb80546796 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-rxe0de59.1/nmdc_wfmgas-11-rxe0de59.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25278dea8043e4e93c34feeb80546796 nmdc:dobj-11-9jfysw84 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-x3cnyj59.1/nmdc_wfmgas-11-x3cnyj59.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25278dea8043e4e93c34feeb80546796 nmdc:dobj-11-x7bn0h03 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxe0de59.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3cnyj59.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a031ef800d3944471d3d6782101ec0cb -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-rxe0de59.1/nmdc_wfmgas-11-rxe0de59.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a031ef800d3944471d3d6782101ec0cb nmdc:dobj-11-jjt1ap98 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-x3cnyj59.1/nmdc_wfmgas-11-x3cnyj59.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a031ef800d3944471d3d6782101ec0cb nmdc:dobj-11-fvxthq11 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxe0de59.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:f684fefc5232c0cfb195bcc4bee8e650 nmdc:wfmgas-11-rxe0de59.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3cnyj59.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:162476593f47b974abed8ce3045019c3 nmdc:dobj-11-5y7bwn89 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-6qn8tc33.1/nmdc_wfrbt-11-6qn8tc33.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:162476593f47b974abed8ce3045019c3 nmdc:dobj-11-scrd2582 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6qn8tc33.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29166ae0141ed8cd69d0c41167fa08f3 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29166ae0141ed8cd69d0c41167fa08f3 nmdc:dobj-11-fxrmtz80 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-6qn8tc33.1/nmdc_wfrbt-11-6qn8tc33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29166ae0141ed8cd69d0c41167fa08f3 nmdc:dobj-11-5cjv7785 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6qn8tc33.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:822af29d1242f2c85ef9d4a8cab092e6 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd729aa563fb2435cf90d336c704feb nmdc:dobj-11-b83q4049 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-6qn8tc33.1/nmdc_wfrbt-11-6qn8tc33.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd729aa563fb2435cf90d336c704feb nmdc:dobj-11-5k0g1g57 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6qn8tc33.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d0387c6fd51db156f588b6e5492456d -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d0387c6fd51db156f588b6e5492456d nmdc:dobj-11-zr3kz653 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-6qn8tc33.1/nmdc_wfrbt-11-6qn8tc33.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d0387c6fd51db156f588b6e5492456d nmdc:dobj-11-waqjs280 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6qn8tc33.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2a68597495663a22ef71374ee86e8a8 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2a68597495663a22ef71374ee86e8a8 nmdc:dobj-11-mkabtk58 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-6qn8tc33.1/nmdc_wfrbt-11-6qn8tc33.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2a68597495663a22ef71374ee86e8a8 nmdc:dobj-11-e2pvsw05 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6qn8tc33.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b34390db85bba4460ea4faa08f97c04 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b34390db85bba4460ea4faa08f97c04 nmdc:dobj-11-gpr3e234 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-6qn8tc33.1/nmdc_wfrbt-11-6qn8tc33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b34390db85bba4460ea4faa08f97c04 nmdc:dobj-11-5v5rv610 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6qn8tc33.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ae3deb16284c899fb978d148f99109d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ae3deb16284c899fb978d148f99109d nmdc:dobj-11-qvzc7e27 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-6qn8tc33.1/nmdc_wfrbt-11-6qn8tc33.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ae3deb16284c899fb978d148f99109d nmdc:dobj-11-19gpqq09 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6qn8tc33.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:130829b30e6e2ed9ec9d701aeb3b88c0 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:130829b30e6e2ed9ec9d701aeb3b88c0 nmdc:dobj-11-zm56n019 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-6qn8tc33.1/nmdc_wfrbt-11-6qn8tc33.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:130829b30e6e2ed9ec9d701aeb3b88c0 nmdc:dobj-11-dspq3e59 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f684fefc5232c0cfb195bcc4bee8e650 nmdc:wfrbt-11-e4pvys80.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6qn8tc33.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f684fefc5232c0cfb195bcc4bee8e650 nmdc:wfrbt-11-6qn8tc33.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-f1akyc51 INFO:root:omics_processing_id: nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dac54b23fce5a5c56c11311c77b74294 nmdc:dobj-11-1k1ryv48 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dac54b23fce5a5c56c11311c77b74294 nmdc:dobj-11-jq7xsq84 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5nka4130 -INFO:root:New activity id created for nmdc:omprc-11-5nka4130 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fdww0g83.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrqc-11-fdww0g83.1 +INFO:root:New activity id created for nmdc:omprc-11-5nka4130 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-nfpjgx95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrqc-11-nfpjgx95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:457cded9b27ef66bb7a306dd61639774 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrqc-11-fdww0g83.1/nmdc_wfrqc-11-fdww0g83.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:457cded9b27ef66bb7a306dd61639774 nmdc:dobj-11-0d5gme42 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrqc-11-nfpjgx95.1/nmdc_wfrqc-11-nfpjgx95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:457cded9b27ef66bb7a306dd61639774 nmdc:dobj-11-rdt0e359 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fdww0g83.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-nfpjgx95.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d6aaadb2e2d175ab3c39df88cabfa09 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrqc-11-fdww0g83.1/nmdc_wfrqc-11-fdww0g83.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d6aaadb2e2d175ab3c39df88cabfa09 nmdc:dobj-11-p0nyw897 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrqc-11-nfpjgx95.1/nmdc_wfrqc-11-nfpjgx95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d6aaadb2e2d175ab3c39df88cabfa09 nmdc:dobj-11-x1x6en23 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fdww0g83.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfrqc-11-fdww0g83.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-nfpjgx95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfrqc-11-nfpjgx95.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5nka4130 -INFO:root:New activity id created for nmdc:omprc-11-5nka4130 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-83njf168.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1 +INFO:root:New activity id created for nmdc:omprc-11-5nka4130 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-e7tzk143.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-e7tzk143.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25c4ceed83baa63f12d5ac4af4fa152b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25c4ceed83baa63f12d5ac4af4fa152b nmdc:dobj-11-g03r1737 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-e7tzk143.1/nmdc_wfmgas-11-e7tzk143.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25c4ceed83baa63f12d5ac4af4fa152b nmdc:dobj-11-eexztb56 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e7tzk143.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be4e193b9d5f0f997f8cf5981a471752 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4e193b9d5f0f997f8cf5981a471752 nmdc:dobj-11-8vzck767 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-e7tzk143.1/nmdc_wfmgas-11-e7tzk143.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4e193b9d5f0f997f8cf5981a471752 nmdc:dobj-11-j303jt91 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e7tzk143.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:953439df7c2113735ce1d946f63f9db4 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:953439df7c2113735ce1d946f63f9db4 nmdc:dobj-11-90hner35 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-e7tzk143.1/nmdc_wfmgas-11-e7tzk143.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:953439df7c2113735ce1d946f63f9db4 nmdc:dobj-11-03hjhh49 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e7tzk143.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9af680311b49916ce2fa1644b0cb28c -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9af680311b49916ce2fa1644b0cb28c nmdc:dobj-11-a5hzf150 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-e7tzk143.1/nmdc_wfmgas-11-e7tzk143.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9af680311b49916ce2fa1644b0cb28c nmdc:dobj-11-0ftdc011 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e7tzk143.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 nmdc:dobj-11-rpemeq23 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-e7tzk143.1/nmdc_wfmgas-11-e7tzk143.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 nmdc:dobj-11-f3t7pq66 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfmgas-11-83njf168.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e7tzk143.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfmgas-11-e7tzk143.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-5nka4130 -INFO:root:New activity id created for nmdc:omprc-11-5nka4130 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-89w89j58.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1 +INFO:root:New activity id created for nmdc:omprc-11-5nka4130 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1pj01w15.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4462a5c000ae58c1629af4d70479fd1c -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4462a5c000ae58c1629af4d70479fd1c nmdc:dobj-11-pcqwmp69 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4462a5c000ae58c1629af4d70479fd1c nmdc:dobj-11-1hb8j957 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09e1ebdb7968df4fb2edad34247a0d96 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e1ebdb7968df4fb2edad34247a0d96 nmdc:dobj-11-6apbcc15 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e1ebdb7968df4fb2edad34247a0d96 nmdc:dobj-11-83caj108 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6af06e84011c8e29f130430051c04dbd -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6af06e84011c8e29f130430051c04dbd nmdc:dobj-11-q3xkq051 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6af06e84011c8e29f130430051c04dbd nmdc:dobj-11-jc6h8n27 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b94e706067160a6a32ace49bce7c551 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b94e706067160a6a32ace49bce7c551 nmdc:dobj-11-ezsp6132 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b94e706067160a6a32ace49bce7c551 nmdc:dobj-11-2m0egy27 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b90c520abe9316e10946ec6d442f6479 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b90c520abe9316e10946ec6d442f6479 nmdc:dobj-11-db2w3c76 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b90c520abe9316e10946ec6d442f6479 nmdc:dobj-11-tb8twx97 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6642f00c83ce9b397f76195517358af6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6642f00c83ce9b397f76195517358af6 nmdc:dobj-11-vz7vpf48 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6642f00c83ce9b397f76195517358af6 nmdc:dobj-11-gmhnjf39 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bff2b6142843c3fd962381a3aa2f34cc -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff2b6142843c3fd962381a3aa2f34cc nmdc:dobj-11-7sseh535 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff2b6142843c3fd962381a3aa2f34cc nmdc:dobj-11-5d7ee734 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c18dba161515a95f936c89a7a2419d06 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c18dba161515a95f936c89a7a2419d06 nmdc:dobj-11-05n4ze95 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c18dba161515a95f936c89a7a2419d06 nmdc:dobj-11-nhfzx294 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ea276228373b27ff6b0928436e677bd -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ea276228373b27ff6b0928436e677bd nmdc:dobj-11-r4bmgw75 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-1pj01w15.1/nmdc_wfrbt-11-1pj01w15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ea276228373b27ff6b0928436e677bd nmdc:dobj-11-9a88f093 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfrbt-11-89w89j58.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1pj01w15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfrbt-11-1pj01w15.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5nka4130 INFO:root:omics_processing_id: nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef11b09bff6940ee45f3c05842b16931 nmdc:dobj-11-txr00q86 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef11b09bff6940ee45f3c05842b16931 nmdc:dobj-11-d00c8y90 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-62am2h65 -INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vcrpkc87.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-vcrpkc87.1 +INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3p164e25.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3p164e25.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a425cd8c99687dfb287017ed35c0d5f -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-vcrpkc87.1/nmdc_wfrqc-11-vcrpkc87.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a425cd8c99687dfb287017ed35c0d5f nmdc:dobj-11-zyd0f655 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-3p164e25.1/nmdc_wfrqc-11-3p164e25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a425cd8c99687dfb287017ed35c0d5f nmdc:dobj-11-kg3r9572 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcrpkc87.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfrqc-11-vcrpkc87.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3p164e25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfrqc-11-3p164e25.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-62am2h65 -INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3net6944.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1 +INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7v1wmb09.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-7v1wmb09.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53b133bcf15c8e42144ea221b0f0a887 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53b133bcf15c8e42144ea221b0f0a887 nmdc:dobj-11-078hy784 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-7v1wmb09.1/nmdc_wfmgas-11-7v1wmb09.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53b133bcf15c8e42144ea221b0f0a887 nmdc:dobj-11-bscdhc80 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7v1wmb09.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f863a250082e61048c2c78d8900ee674 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f863a250082e61048c2c78d8900ee674 nmdc:dobj-11-5x0g3412 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-7v1wmb09.1/nmdc_wfmgas-11-7v1wmb09.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f863a250082e61048c2c78d8900ee674 nmdc:dobj-11-1c1b4e62 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7v1wmb09.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84ed09ab11f6b16c4232d963b399047a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84ed09ab11f6b16c4232d963b399047a nmdc:dobj-11-yzcym378 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-7v1wmb09.1/nmdc_wfmgas-11-7v1wmb09.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84ed09ab11f6b16c4232d963b399047a nmdc:dobj-11-tvvkta84 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7v1wmb09.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77d566d4876f42705d7d97da57b9e26a -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77d566d4876f42705d7d97da57b9e26a nmdc:dobj-11-0g6neg93 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-7v1wmb09.1/nmdc_wfmgas-11-7v1wmb09.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77d566d4876f42705d7d97da57b9e26a nmdc:dobj-11-vfx3w128 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7v1wmb09.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eeca0423df4faff401577c56437cb9f1 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eeca0423df4faff401577c56437cb9f1 nmdc:dobj-11-ey947e27 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-7v1wmb09.1/nmdc_wfmgas-11-7v1wmb09.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eeca0423df4faff401577c56437cb9f1 nmdc:dobj-11-p8ws8175 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfmgas-11-3net6944.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7v1wmb09.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfmgas-11-7v1wmb09.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-62am2h65 -INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vvef1x51.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1 +INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-phsqma60.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d nmdc:dobj-11-djry5173 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d nmdc:dobj-11-dxn81172 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f27feac509e24df07ff22bf21e03d49a -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f27feac509e24df07ff22bf21e03d49a nmdc:dobj-11-j7s7ry36 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f27feac509e24df07ff22bf21e03d49a nmdc:dobj-11-78q4yw51 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c67be157191bc733090db7c6e0ca0f89 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67be157191bc733090db7c6e0ca0f89 nmdc:dobj-11-5q825g70 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67be157191bc733090db7c6e0ca0f89 nmdc:dobj-11-6dn8w154 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3244f8601e6d77b419152d05d7e836e -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3244f8601e6d77b419152d05d7e836e nmdc:dobj-11-wxrfrc53 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3244f8601e6d77b419152d05d7e836e nmdc:dobj-11-d3crtr37 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ae8ca0ec9a1c84205038b854205e587 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ae8ca0ec9a1c84205038b854205e587 nmdc:dobj-11-d0hyzz52 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ae8ca0ec9a1c84205038b854205e587 nmdc:dobj-11-4qn5kh97 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:01c99ba64519b8bd3c050b3d16706111 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01c99ba64519b8bd3c050b3d16706111 nmdc:dobj-11-ahnthw05 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01c99ba64519b8bd3c050b3d16706111 nmdc:dobj-11-fgm40526 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:437020ba232579f82ea03b1c018456ca -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:437020ba232579f82ea03b1c018456ca nmdc:dobj-11-2p3qna21 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:437020ba232579f82ea03b1c018456ca nmdc:dobj-11-5xdcxh88 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82ea4c0739c7289dea24e6074e7fcd1c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82ea4c0739c7289dea24e6074e7fcd1c nmdc:dobj-11-dg6cff81 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82ea4c0739c7289dea24e6074e7fcd1c nmdc:dobj-11-1dsyqa39 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f479aa0eca808c031de0d80b3a10a1a8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f479aa0eca808c031de0d80b3a10a1a8 nmdc:dobj-11-9y4rgr55 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-phsqma60.1/nmdc_wfrbt-11-phsqma60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f479aa0eca808c031de0d80b3a10a1a8 nmdc:dobj-11-9xrkdx05 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfrbt-11-vvef1x51.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-phsqma60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfrbt-11-phsqma60.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-62am2h65 INFO:root:omics_processing_id: nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:426202d9528d4af01aa6aeeb6ebb5aac nmdc:dobj-11-7szs3g82 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:426202d9528d4af01aa6aeeb6ebb5aac nmdc:dobj-11-fd932829 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8fpzs917 -INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gx4r8664.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-gx4r8664.1 +INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-tz0wxb06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-tz0wxb06.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db283cbf272ab654da9d4b6a450cc24f -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-gx4r8664.1/nmdc_wfrqc-11-gx4r8664.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db283cbf272ab654da9d4b6a450cc24f nmdc:dobj-11-pg21t302 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-tz0wxb06.1/nmdc_wfrqc-11-tz0wxb06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db283cbf272ab654da9d4b6a450cc24f nmdc:dobj-11-63vcn197 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gx4r8664.1_filtered.fastq.gz 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nmdc:6346585864f97f2e5caf5fc804127755 nmdc:wfrqc-11-gx4r8664.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tz0wxb06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6346585864f97f2e5caf5fc804127755 nmdc:wfrqc-11-tz0wxb06.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-8fpzs917 -INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vqw0mq48.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-vqw0mq48.1 +INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-pqh4h588.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-pqh4h588.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cea51b509fbdb0b47b1351aa7902556 -INFO:root:New file path computed for 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0946444733dadcf9dcbe7b234f53bf6b nmdc:dobj-11-28383678 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-rcstz396.1/nmdc_wfrbt-11-rcstz396.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0946444733dadcf9dcbe7b234f53bf6b nmdc:dobj-11-9r3p3977 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rcstz396.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 nmdc:dobj-11-hf94tj31 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-rcstz396.1/nmdc_wfrbt-11-rcstz396.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 nmdc:dobj-11-9mmcjw26 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rcstz396.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e66471eceb4c3421297919501d04899 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e66471eceb4c3421297919501d04899 nmdc:dobj-11-cpxr1g24 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-rcstz396.1/nmdc_wfrbt-11-rcstz396.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e66471eceb4c3421297919501d04899 nmdc:dobj-11-wde7tt87 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rcstz396.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b76d37c44c22589af96491cb4ef021d8 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b76d37c44c22589af96491cb4ef021d8 nmdc:dobj-11-wrkg2598 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-rcstz396.1/nmdc_wfrbt-11-rcstz396.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b76d37c44c22589af96491cb4ef021d8 nmdc:dobj-11-vkg7qy66 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rcstz396.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e40ea1e272be59efcf7007c46382d25e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e40ea1e272be59efcf7007c46382d25e nmdc:dobj-11-xz5mzq04 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-rcstz396.1/nmdc_wfrbt-11-rcstz396.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e40ea1e272be59efcf7007c46382d25e nmdc:dobj-11-kyw4gz71 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rcstz396.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:940fbc40a8aee0384534b966348b39ea -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75927a7b9e0d5d95b95adfd04ff185dd nmdc:dobj-11-4t77cf29 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-rcstz396.1/nmdc_wfrbt-11-rcstz396.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75927a7b9e0d5d95b95adfd04ff185dd nmdc:dobj-11-ysmft250 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rcstz396.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab2e59e3e053a742e13724228318b735 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e34c2e87918fb623b2a7661cf36bfa7 nmdc:dobj-11-jm5a4b19 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-r56p0889.1/nmdc_wfmgas-11-r56p0889.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e34c2e87918fb623b2a7661cf36bfa7 nmdc:dobj-11-8bmqc612 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r56p0889.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d39cd00c78689bfe7a71d5ab1d85a488 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d39cd00c78689bfe7a71d5ab1d85a488 nmdc:dobj-11-ptrfz890 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-r56p0889.1/nmdc_wfmgas-11-r56p0889.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d39cd00c78689bfe7a71d5ab1d85a488 nmdc:dobj-11-yah9gy66 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r56p0889.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a21eb2b65627b5942c35010f6ff62ba6 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a21eb2b65627b5942c35010f6ff62ba6 nmdc:dobj-11-2vqy6377 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-r56p0889.1/nmdc_wfmgas-11-r56p0889.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a21eb2b65627b5942c35010f6ff62ba6 nmdc:dobj-11-621tyx54 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r56p0889.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3a4775e54eb99509f2d35314cf68705 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3a4775e54eb99509f2d35314cf68705 nmdc:dobj-11-xs0dew71 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-r56p0889.1/nmdc_wfmgas-11-r56p0889.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3a4775e54eb99509f2d35314cf68705 nmdc:dobj-11-2283zk91 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r56p0889.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ba2fa1136c55203072ea2538980ddd6 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ba2fa1136c55203072ea2538980ddd6 nmdc:dobj-11-h52nh907 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-r56p0889.1/nmdc_wfmgas-11-r56p0889.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ba2fa1136c55203072ea2538980ddd6 nmdc:dobj-11-tzz16f05 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:7bcab96677bf2080a446277c21fce249 nmdc:wfmgas-11-e5205x21.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r56p0889.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26af6a9cfbc59c380be916b7dd9ec66c nmdc:dobj-11-4x6ht009 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26af6a9cfbc59c380be916b7dd9ec66c nmdc:dobj-11-4j5f7d31 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:391138258e22a253a52fe8beb1e53eca -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:391138258e22a253a52fe8beb1e53eca nmdc:dobj-11-4cnadj58 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:391138258e22a253a52fe8beb1e53eca nmdc:dobj-11-2s5xs980 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1a8f51847736cf459e75e2414a0066d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1a8f51847736cf459e75e2414a0066d nmdc:dobj-11-vhdgr998 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1a8f51847736cf459e75e2414a0066d nmdc:dobj-11-zphtcj44 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51e9e7947025802ac2ef249e475c640f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e9e7947025802ac2ef249e475c640f nmdc:dobj-11-es9j0q46 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e9e7947025802ac2ef249e475c640f nmdc:dobj-11-bxq47n83 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed nmdc:dobj-11-9vmnh465 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed nmdc:dobj-11-cy38ca30 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5aa266e817720ff47d7aa850c818715 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5aa266e817720ff47d7aa850c818715 nmdc:dobj-11-hxw7yf41 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5aa266e817720ff47d7aa850c818715 nmdc:dobj-11-gnwapp52 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f15ff004d666aec8af98763c326c38a -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f15ff004d666aec8af98763c326c38a nmdc:dobj-11-wc4ms834 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f15ff004d666aec8af98763c326c38a nmdc:dobj-11-02cbn986 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2014e8a59067392e7354a0f01fafd6d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2014e8a59067392e7354a0f01fafd6d nmdc:dobj-11-j59t3a49 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2014e8a59067392e7354a0f01fafd6d nmdc:dobj-11-b9vtrn22 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac6d3b9fa77d411df771712fa82fdd9a -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac6d3b9fa77d411df771712fa82fdd9a nmdc:dobj-11-m1vtc174 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z2rbj653.1/nmdc_wfrbt-11-z2rbj653.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac6d3b9fa77d411df771712fa82fdd9a nmdc:dobj-11-v8d45n15 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7bcab96677bf2080a446277c21fce249 nmdc:wfrbt-11-wtfny728.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z2rbj653.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7bcab96677bf2080a446277c21fce249 nmdc:wfrbt-11-z2rbj653.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gvyfjg32 INFO:root:omics_processing_id: nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:104c9da6da3a685e5b1b8a3b2652bdd7 nmdc:dobj-11-nv619g55 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:104c9da6da3a685e5b1b8a3b2652bdd7 nmdc:dobj-11-7zzxhw80 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-abadtt88 -INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cwyx8p22.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-cwyx8p22.1 +INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4tpkhv28.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4tpkhv28.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37a9c8f31c8240c7a72233e33724dc18 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-cwyx8p22.1/nmdc_wfrqc-11-cwyx8p22.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37a9c8f31c8240c7a72233e33724dc18 nmdc:dobj-11-zwfc2c67 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-4tpkhv28.1/nmdc_wfrqc-11-4tpkhv28.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37a9c8f31c8240c7a72233e33724dc18 nmdc:dobj-11-q1y1nj91 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cwyx8p22.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fd67e63fb2596a761f6fa7b37a2f7d29 nmdc:wfrqc-11-cwyx8p22.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4tpkhv28.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fd67e63fb2596a761f6fa7b37a2f7d29 nmdc:wfrqc-11-4tpkhv28.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-abadtt88 -INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yjmr1z61.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1 +INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5kgdzj73.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-5kgdzj73.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d1f4d18d08b33b08f872807f17d8ec8 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d1f4d18d08b33b08f872807f17d8ec8 nmdc:dobj-11-en24bf06 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-5kgdzj73.1/nmdc_wfmgas-11-5kgdzj73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d1f4d18d08b33b08f872807f17d8ec8 nmdc:dobj-11-3atmkd20 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5kgdzj73.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cad82a7e34092c6206773536c52107f5 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cad82a7e34092c6206773536c52107f5 nmdc:dobj-11-6whab006 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-5kgdzj73.1/nmdc_wfmgas-11-5kgdzj73.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cad82a7e34092c6206773536c52107f5 nmdc:dobj-11-1dk62e78 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5kgdzj73.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a9d4f0be1f4e5b57e5b59592b496e5ee -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9d4f0be1f4e5b57e5b59592b496e5ee nmdc:dobj-11-fr7wb362 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-5kgdzj73.1/nmdc_wfmgas-11-5kgdzj73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9d4f0be1f4e5b57e5b59592b496e5ee nmdc:dobj-11-shcad050 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5kgdzj73.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdaf545aa50d1180aaee1ea6b325dce3 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdaf545aa50d1180aaee1ea6b325dce3 nmdc:dobj-11-5db0xh78 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-5kgdzj73.1/nmdc_wfmgas-11-5kgdzj73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdaf545aa50d1180aaee1ea6b325dce3 nmdc:dobj-11-x6kgdz70 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5kgdzj73.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6316e96b726e8d5e4782ea3c654ef37d -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd89f6fb8c30f35040400d527117f7c1 nmdc:dobj-11-49js1s09 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-brbcrs77.1/nmdc_wfrbt-11-brbcrs77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd89f6fb8c30f35040400d527117f7c1 nmdc:dobj-11-88nwac66 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-brbcrs77.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:20d68f36daa6167687d12cd0558598ce -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20d68f36daa6167687d12cd0558598ce nmdc:dobj-11-jr76g942 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-brbcrs77.1/nmdc_wfrbt-11-brbcrs77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20d68f36daa6167687d12cd0558598ce nmdc:dobj-11-tfkpa657 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-brbcrs77.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1584c99826b72d31e550a09dc839ce89 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1584c99826b72d31e550a09dc839ce89 nmdc:dobj-11-vrw49p53 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-brbcrs77.1/nmdc_wfrbt-11-brbcrs77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1584c99826b72d31e550a09dc839ce89 nmdc:dobj-11-1k45qc28 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-brbcrs77.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c3f084c4224500fb67a6fe44053e0cd -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c3f084c4224500fb67a6fe44053e0cd nmdc:dobj-11-x1nanv96 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-brbcrs77.1/nmdc_wfrbt-11-brbcrs77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c3f084c4224500fb67a6fe44053e0cd nmdc:dobj-11-p56jt969 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-brbcrs77.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4994d80507dc9b4b366debef805d2227 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4994d80507dc9b4b366debef805d2227 nmdc:dobj-11-arj0xq76 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-brbcrs77.1/nmdc_wfrbt-11-brbcrs77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4994d80507dc9b4b366debef805d2227 nmdc:dobj-11-wmbyhw35 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-brbcrs77.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e76e3bfb17589a0396f0071b6488226a -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66a58407634a85b137a22d9b245db41a nmdc:dobj-11-0tdpeg32 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-brbcrs77.1/nmdc_wfrbt-11-brbcrs77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66a58407634a85b137a22d9b245db41a nmdc:dobj-11-pe3mrh74 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-brbcrs77.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:986051bcc64e9d19435bc2c56ccdfb98 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:986051bcc64e9d19435bc2c56ccdfb98 nmdc:dobj-11-mtqtyv27 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-brbcrs77.1/nmdc_wfrbt-11-brbcrs77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:986051bcc64e9d19435bc2c56ccdfb98 nmdc:dobj-11-11r5w212 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-brbcrs77.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3816b59147b769cddc7c1d514011294 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3816b59147b769cddc7c1d514011294 nmdc:dobj-11-0fnnjk43 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-brbcrs77.1/nmdc_wfrbt-11-brbcrs77.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3816b59147b769cddc7c1d514011294 nmdc:dobj-11-0bftqv29 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fd67e63fb2596a761f6fa7b37a2f7d29 nmdc:wfrbt-11-030rqn93.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-brbcrs77.1_kraken2_krona.html 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-kbgj3002.1/nmdc_wfmgas-11-kbgj3002.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e344991a805201b76bfa8afc634c8e59 nmdc:dobj-11-vepar570 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-9yny1g10.1/nmdc_wfmgas-11-9yny1g10.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e344991a805201b76bfa8afc634c8e59 nmdc:dobj-11-81wgd613 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kbgj3002.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9yny1g10.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4040fb85b92c4c72d37b16e70e999715 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-kbgj3002.1/nmdc_wfmgas-11-kbgj3002.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4040fb85b92c4c72d37b16e70e999715 nmdc:dobj-11-qmnwyb60 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-9yny1g10.1/nmdc_wfmgas-11-9yny1g10.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4040fb85b92c4c72d37b16e70e999715 nmdc:dobj-11-srjvfr43 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kbgj3002.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9yny1g10.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-kbgj3002.1/nmdc_wfmgas-11-kbgj3002.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 nmdc:dobj-11-fbemk920 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-9yny1g10.1/nmdc_wfmgas-11-9yny1g10.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 nmdc:dobj-11-fa6g8j22 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kbgj3002.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfmgas-11-kbgj3002.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9yny1g10.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfmgas-11-9yny1g10.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-kj0jpg50 -INFO:root:New activity id created for nmdc:omprc-11-kj0jpg50 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-d6nsxe49.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1 +INFO:root:New activity id created for nmdc:omprc-11-kj0jpg50 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-7xa3gp10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f64b6d9493bff8fcf83f3f914df1b61 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f64b6d9493bff8fcf83f3f914df1b61 nmdc:dobj-11-hmc4k344 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f64b6d9493bff8fcf83f3f914df1b61 nmdc:dobj-11-c5441231 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9147a83cc015cf896a7c1684dcb9bf8 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9147a83cc015cf896a7c1684dcb9bf8 nmdc:dobj-11-n89sgp55 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9147a83cc015cf896a7c1684dcb9bf8 nmdc:dobj-11-0wxr5w06 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee2d6a7c74af6e4c124c606400bd8306 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee2d6a7c74af6e4c124c606400bd8306 nmdc:dobj-11-76tvrx06 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee2d6a7c74af6e4c124c606400bd8306 nmdc:dobj-11-cxbwhq19 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:754cc6e6046f9ee4ac2324974bdffa1c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754cc6e6046f9ee4ac2324974bdffa1c nmdc:dobj-11-cq4zmg63 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754cc6e6046f9ee4ac2324974bdffa1c nmdc:dobj-11-smr8p686 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd24a4640ef629e255fe4af0353e68fd -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd24a4640ef629e255fe4af0353e68fd nmdc:dobj-11-wkjr2g66 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd24a4640ef629e255fe4af0353e68fd nmdc:dobj-11-ynd52182 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4454244aa8d4e5c886cb839780defef2 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4454244aa8d4e5c886cb839780defef2 nmdc:dobj-11-gmq47m84 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4454244aa8d4e5c886cb839780defef2 nmdc:dobj-11-87gyqm61 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a391da88c8bcd5eeeeabbe417ae83572 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a391da88c8bcd5eeeeabbe417ae83572 nmdc:dobj-11-vfx8c951 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a391da88c8bcd5eeeeabbe417ae83572 nmdc:dobj-11-pwcqrt86 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:986a43b1309ea630dcef137d7d41a8de -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:986a43b1309ea630dcef137d7d41a8de nmdc:dobj-11-24tyd087 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:986a43b1309ea630dcef137d7d41a8de nmdc:dobj-11-1m6j7554 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:455254de6b416946e7433a1fe2c00932 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:455254de6b416946e7433a1fe2c00932 nmdc:dobj-11-af1jwz65 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-7xa3gp10.1/nmdc_wfrbt-11-7xa3gp10.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:455254de6b416946e7433a1fe2c00932 nmdc:dobj-11-xftzv485 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfrbt-11-d6nsxe49.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7xa3gp10.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfrbt-11-7xa3gp10.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-kj0jpg50 INFO:root:omics_processing_id: nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8656757191fe5a86d3a4d524d5f513e2 nmdc:dobj-11-t9c2n825 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8656757191fe5a86d3a4d524d5f513e2 nmdc:dobj-11-57vf9q37 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-2rmac411 -INFO:root:New activity id created for nmdc:omprc-11-2rmac411 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mssv5e05.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrqc-11-mssv5e05.1 +INFO:root:New activity id created for nmdc:omprc-11-2rmac411 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hjwxs013.1 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa10ae73ca177f92ae50c5311ee16e09 nmdc:dobj-11-k6e0h004 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-etknyz88.1/nmdc_wfmgas-11-etknyz88.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa10ae73ca177f92ae50c5311ee16e09 nmdc:dobj-11-s5e7xg52 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-etknyz88.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1667f3a9d5ad4f2a008aa1a8220834b0 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4a4ff4f1d5cfda922057876ea6a0a00 nmdc:dobj-11-54781206 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-etknyz88.1/nmdc_wfmgas-11-etknyz88.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4a4ff4f1d5cfda922057876ea6a0a00 nmdc:dobj-11-dr6zcm42 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-etknyz88.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:979a9e14085b248d091116ebf844d431 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:979a9e14085b248d091116ebf844d431 nmdc:dobj-11-rj4c2326 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-etknyz88.1/nmdc_wfmgas-11-etknyz88.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:979a9e14085b248d091116ebf844d431 nmdc:dobj-11-784frp68 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-etknyz88.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bf1a3c10d2c70f0b2e80318d69e31b6 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bf1a3c10d2c70f0b2e80318d69e31b6 nmdc:dobj-11-ctkxsc93 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-etknyz88.1/nmdc_wfmgas-11-etknyz88.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bf1a3c10d2c70f0b2e80318d69e31b6 nmdc:dobj-11-mz504s53 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:26b621b903f185d49d6b7fb9ac0ca9f7 nmdc:wfmgas-11-xn923d20.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-etknyz88.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d153a1e250bf419cf54bbe9c0be1fff6 nmdc:dobj-11-1vxqqf55 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d153a1e250bf419cf54bbe9c0be1fff6 nmdc:dobj-11-pwbfck76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42c66b9d55f81a9ccb6a49209bca21b4 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42c66b9d55f81a9ccb6a49209bca21b4 nmdc:dobj-11-31w1a682 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42c66b9d55f81a9ccb6a49209bca21b4 nmdc:dobj-11-17f7pm04 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e637ad8e302e53d4191c27a26e6b24f3 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e637ad8e302e53d4191c27a26e6b24f3 nmdc:dobj-11-smmdhv59 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e637ad8e302e53d4191c27a26e6b24f3 nmdc:dobj-11-ny73fm16 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31eecb6142eb5975e9f7302e9716c750 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31eecb6142eb5975e9f7302e9716c750 nmdc:dobj-11-8y462986 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31eecb6142eb5975e9f7302e9716c750 nmdc:dobj-11-az8kdt90 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:01a13a8c760eed71143cfb44f4897c1b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01a13a8c760eed71143cfb44f4897c1b nmdc:dobj-11-w9y3a957 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01a13a8c760eed71143cfb44f4897c1b nmdc:dobj-11-6199tq71 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1649191c4fa6b979559061a3f7ac3da7 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1649191c4fa6b979559061a3f7ac3da7 nmdc:dobj-11-2q71tk75 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1649191c4fa6b979559061a3f7ac3da7 nmdc:dobj-11-tvpyhg42 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 nmdc:dobj-11-aa3gkm29 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 nmdc:dobj-11-1ptsrb60 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcffa09dd745360a48fa17257f9859fa -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcffa09dd745360a48fa17257f9859fa nmdc:dobj-11-jt4mpq62 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcffa09dd745360a48fa17257f9859fa nmdc:dobj-11-esx0m348 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bc2050ad81b78baaf626aeca22d55ccf -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bc2050ad81b78baaf626aeca22d55ccf nmdc:dobj-11-pw1fd952 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-g570ry28.1/nmdc_wfrbt-11-g570ry28.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bc2050ad81b78baaf626aeca22d55ccf nmdc:dobj-11-381bky16 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:26b621b903f185d49d6b7fb9ac0ca9f7 nmdc:wfrbt-11-qr8feb18.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g570ry28.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:26b621b903f185d49d6b7fb9ac0ca9f7 nmdc:wfrbt-11-g570ry28.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-2rmac411 INFO:root:omics_processing_id: nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bef74063c8db88eca336299184d80942 nmdc:dobj-11-hhz8s394 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bef74063c8db88eca336299184d80942 nmdc:dobj-11-pt2prc77 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-sq1snj73 -INFO:root:New activity id created for nmdc:omprc-11-sq1snj73 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-p4r32970.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrqc-11-p4r32970.1 +INFO:root:New activity id created for nmdc:omprc-11-sq1snj73 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-383z5e22.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrqc-11-383z5e22.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ead7787ee5ca7dd6dc0196b71ca7b6c -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrqc-11-p4r32970.1/nmdc_wfrqc-11-p4r32970.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ead7787ee5ca7dd6dc0196b71ca7b6c nmdc:dobj-11-ja03h721 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrqc-11-383z5e22.1/nmdc_wfrqc-11-383z5e22.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ead7787ee5ca7dd6dc0196b71ca7b6c nmdc:dobj-11-nccnxa66 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p4r32970.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-383z5e22.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1efd3ac02cecbbaf108179d26e0c515f -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrqc-11-p4r32970.1/nmdc_wfrqc-11-p4r32970.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1efd3ac02cecbbaf108179d26e0c515f nmdc:dobj-11-efdt3f46 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrqc-11-383z5e22.1/nmdc_wfrqc-11-383z5e22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1efd3ac02cecbbaf108179d26e0c515f nmdc:dobj-11-017m1226 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p4r32970.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c611f0dc7da6977e866733830181b8c2 nmdc:wfrqc-11-p4r32970.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-383z5e22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c611f0dc7da6977e866733830181b8c2 nmdc:wfrqc-11-383z5e22.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-sq1snj73 -INFO:root:New activity id created for nmdc:omprc-11-sq1snj73 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8cc30c56.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-8cc30c56.1 +INFO:root:New activity id created for nmdc:omprc-11-sq1snj73 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-d2mbgv52.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-d2mbgv52.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a7b22ff3e4c2e2c671fba3623685b401 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-8cc30c56.1/nmdc_wfmgas-11-8cc30c56.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7b22ff3e4c2e2c671fba3623685b401 nmdc:dobj-11-anv2h446 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-d2mbgv52.1/nmdc_wfmgas-11-d2mbgv52.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7b22ff3e4c2e2c671fba3623685b401 nmdc:dobj-11-p0xqf316 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8cc30c56.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d2mbgv52.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0cc57d5c5c54980c60fa4a82d10d2e76 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-8cc30c56.1/nmdc_wfmgas-11-8cc30c56.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0cc57d5c5c54980c60fa4a82d10d2e76 nmdc:dobj-11-q62yke09 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-d2mbgv52.1/nmdc_wfmgas-11-d2mbgv52.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0cc57d5c5c54980c60fa4a82d10d2e76 nmdc:dobj-11-fvwe3a83 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8cc30c56.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d2mbgv52.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ac7cc71adc614863f7ee748a29300b4 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-8cc30c56.1/nmdc_wfmgas-11-8cc30c56.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ac7cc71adc614863f7ee748a29300b4 nmdc:dobj-11-ztrscx91 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-d2mbgv52.1/nmdc_wfmgas-11-d2mbgv52.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ac7cc71adc614863f7ee748a29300b4 nmdc:dobj-11-wswc2b32 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8cc30c56.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d2mbgv52.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae1d558356ea6581b2d74b22ea2e1fff -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-8cc30c56.1/nmdc_wfmgas-11-8cc30c56.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae1d558356ea6581b2d74b22ea2e1fff nmdc:dobj-11-w2jyh045 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-d2mbgv52.1/nmdc_wfmgas-11-d2mbgv52.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae1d558356ea6581b2d74b22ea2e1fff nmdc:dobj-11-y329ng11 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8cc30c56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d2mbgv52.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ae32293769ba42f0691f7f2de1d26a8 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-8cc30c56.1/nmdc_wfmgas-11-8cc30c56.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ae32293769ba42f0691f7f2de1d26a8 nmdc:dobj-11-ra1rte92 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-d2mbgv52.1/nmdc_wfmgas-11-d2mbgv52.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ae32293769ba42f0691f7f2de1d26a8 nmdc:dobj-11-m8vtr642 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8cc30c56.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c611f0dc7da6977e866733830181b8c2 nmdc:wfmgas-11-8cc30c56.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d2mbgv52.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c611f0dc7da6977e866733830181b8c2 nmdc:wfmgas-11-d2mbgv52.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-sq1snj73 -INFO:root:New activity id created for nmdc:omprc-11-sq1snj73 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-5vkzz333.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1 +INFO:root:New activity id created for nmdc:omprc-11-sq1snj73 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-3r8bxa79.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:806dbb35c8025db29d569c758ddb2115 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:806dbb35c8025db29d569c758ddb2115 nmdc:dobj-11-jc4awx79 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:806dbb35c8025db29d569c758ddb2115 nmdc:dobj-11-x336a097 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:395441e566a48a7f3fd7661e02c39b46 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:395441e566a48a7f3fd7661e02c39b46 nmdc:dobj-11-9qc3wx35 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:395441e566a48a7f3fd7661e02c39b46 nmdc:dobj-11-w66xmy79 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:570a1044d48814b42fc253d610b8675d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:570a1044d48814b42fc253d610b8675d nmdc:dobj-11-gmrmcv52 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:570a1044d48814b42fc253d610b8675d nmdc:dobj-11-xperck94 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0abce45e3702eb3f6fcad6cd6de93965 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0abce45e3702eb3f6fcad6cd6de93965 nmdc:dobj-11-mz76pj04 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0abce45e3702eb3f6fcad6cd6de93965 nmdc:dobj-11-bn81z960 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0eac886070886288d61760a4ef91b9f3 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0eac886070886288d61760a4ef91b9f3 nmdc:dobj-11-cs6r3815 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0eac886070886288d61760a4ef91b9f3 nmdc:dobj-11-ep0fzz10 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b368068e335e30cecd46034a93680db -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b368068e335e30cecd46034a93680db nmdc:dobj-11-wbd6j010 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b368068e335e30cecd46034a93680db nmdc:dobj-11-2dvymf38 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23dcdd951428db0e7ac83047307c04c2 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23dcdd951428db0e7ac83047307c04c2 nmdc:dobj-11-da5a0489 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23dcdd951428db0e7ac83047307c04c2 nmdc:dobj-11-4q2d0814 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebdd87b9c03afcd3253386926942a3d7 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebdd87b9c03afcd3253386926942a3d7 nmdc:dobj-11-95c5jj58 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebdd87b9c03afcd3253386926942a3d7 nmdc:dobj-11-pn71nd50 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae85c806846b65e5179dfc5c4e593df8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae85c806846b65e5179dfc5c4e593df8 nmdc:dobj-11-cts84633 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-3r8bxa79.1/nmdc_wfrbt-11-3r8bxa79.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae85c806846b65e5179dfc5c4e593df8 nmdc:dobj-11-18ce6w08 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c611f0dc7da6977e866733830181b8c2 nmdc:wfrbt-11-5vkzz333.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3r8bxa79.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c611f0dc7da6977e866733830181b8c2 nmdc:wfrbt-11-3r8bxa79.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-sq1snj73 INFO:root:omics_processing_id: nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65b3ee1c8092cfe1b7fef18cbca970d9 nmdc:dobj-11-jr33dp76 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65b3ee1c8092cfe1b7fef18cbca970d9 nmdc:dobj-11-2pdqgn38 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-vwvc8h03 -INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-p6kxdx62.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-p6kxdx62.1 +INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mzn92890.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-mzn92890.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0096101fe9ef52d6d21a0e053133ca2f -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-p6kxdx62.1/nmdc_wfrqc-11-p6kxdx62.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0096101fe9ef52d6d21a0e053133ca2f nmdc:dobj-11-yvfkjn98 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-mzn92890.1/nmdc_wfrqc-11-mzn92890.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0096101fe9ef52d6d21a0e053133ca2f nmdc:dobj-11-ssy03g15 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p6kxdx62.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mzn92890.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7808998d6af494523d5dbc2d272df8a6 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-p6kxdx62.1/nmdc_wfrqc-11-p6kxdx62.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7808998d6af494523d5dbc2d272df8a6 nmdc:dobj-11-0he17n39 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-mzn92890.1/nmdc_wfrqc-11-mzn92890.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7808998d6af494523d5dbc2d272df8a6 nmdc:dobj-11-zw4gsa18 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p6kxdx62.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfrqc-11-p6kxdx62.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mzn92890.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfrqc-11-mzn92890.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-vwvc8h03 -INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8nbk9d67.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1 +INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-e364tw37.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-e364tw37.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb39be00f9eca4c319d460e7320a910c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb39be00f9eca4c319d460e7320a910c nmdc:dobj-11-xc3rna07 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-e364tw37.1/nmdc_wfmgas-11-e364tw37.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb39be00f9eca4c319d460e7320a910c nmdc:dobj-11-f695dd21 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e364tw37.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:186f97d21b303ee5d33e8476c1e8a511 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:186f97d21b303ee5d33e8476c1e8a511 nmdc:dobj-11-f4wsm508 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-e364tw37.1/nmdc_wfmgas-11-e364tw37.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:186f97d21b303ee5d33e8476c1e8a511 nmdc:dobj-11-13f59253 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e364tw37.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bff87179b7c0e0c8b1b61c97b0936524 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff87179b7c0e0c8b1b61c97b0936524 nmdc:dobj-11-5d56tj37 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-e364tw37.1/nmdc_wfmgas-11-e364tw37.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff87179b7c0e0c8b1b61c97b0936524 nmdc:dobj-11-27cmzj85 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e364tw37.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:600b6d34f1148edee4418ab9a2e2b6c8 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:600b6d34f1148edee4418ab9a2e2b6c8 nmdc:dobj-11-rkj14229 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-e364tw37.1/nmdc_wfmgas-11-e364tw37.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:600b6d34f1148edee4418ab9a2e2b6c8 nmdc:dobj-11-hr28wg15 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e364tw37.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:245bd47165e85215955550b566497026 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:245bd47165e85215955550b566497026 nmdc:dobj-11-qtve7c93 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-e364tw37.1/nmdc_wfmgas-11-e364tw37.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:245bd47165e85215955550b566497026 nmdc:dobj-11-akx62994 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfmgas-11-8nbk9d67.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e364tw37.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfmgas-11-e364tw37.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-vwvc8h03 -INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-v5ayb614.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1 +INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-znjef565.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:49c4b6496f7f81baadb792cc334276c1 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49c4b6496f7f81baadb792cc334276c1 nmdc:dobj-11-j609z126 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49c4b6496f7f81baadb792cc334276c1 nmdc:dobj-11-kwzhtn46 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3e0be12cb5ac87419db27de68ec2954 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3e0be12cb5ac87419db27de68ec2954 nmdc:dobj-11-712hx512 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3e0be12cb5ac87419db27de68ec2954 nmdc:dobj-11-dnzc1887 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86b04c033ff5adda542213f73b767aa7 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86b04c033ff5adda542213f73b767aa7 nmdc:dobj-11-4wc69079 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86b04c033ff5adda542213f73b767aa7 nmdc:dobj-11-qav3kn14 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86979a02b7368694226c22c70adee6fe -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86979a02b7368694226c22c70adee6fe nmdc:dobj-11-ap3s0z49 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86979a02b7368694226c22c70adee6fe nmdc:dobj-11-k791at51 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 nmdc:dobj-11-4hgxxz89 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 nmdc:dobj-11-ja5w4d90 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6904bdc7513848f636a48c9e979fadd7 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6904bdc7513848f636a48c9e979fadd7 nmdc:dobj-11-wnpnhz23 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6904bdc7513848f636a48c9e979fadd7 nmdc:dobj-11-ypa0hq79 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:06089a2dd871efdb75a5f20c40bd1ad8 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06089a2dd871efdb75a5f20c40bd1ad8 nmdc:dobj-11-wbe44n20 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06089a2dd871efdb75a5f20c40bd1ad8 nmdc:dobj-11-1qtv0r43 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c989dce0710ad2c74636dc714bd61cfd -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c989dce0710ad2c74636dc714bd61cfd nmdc:dobj-11-nntajv52 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c989dce0710ad2c74636dc714bd61cfd nmdc:dobj-11-8mreb377 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cef21d5fe576d361833aa3df98d4b436 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cef21d5fe576d361833aa3df98d4b436 nmdc:dobj-11-mq23h607 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-znjef565.1/nmdc_wfrbt-11-znjef565.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cef21d5fe576d361833aa3df98d4b436 nmdc:dobj-11-973hcs87 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfrbt-11-v5ayb614.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-znjef565.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfrbt-11-znjef565.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-vwvc8h03 INFO:root:omics_processing_id: nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d38a56c9121372e8eb41f4f8f139481c nmdc:dobj-11-my0bv930 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d38a56c9121372e8eb41f4f8f139481c nmdc:dobj-11-8a2q8x52 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-vn1ar862 -INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sag5p435.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-sag5p435.1 +INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-n1qd7513.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-n1qd7513.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a5ae0143648a06f48f6802db863fd4b -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-sag5p435.1/nmdc_wfrqc-11-sag5p435.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a5ae0143648a06f48f6802db863fd4b nmdc:dobj-11-vhap4038 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-n1qd7513.1/nmdc_wfrqc-11-n1qd7513.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a5ae0143648a06f48f6802db863fd4b nmdc:dobj-11-ww198a82 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sag5p435.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n1qd7513.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2192712dc05c20684d9dd64c7fff23d -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-sag5p435.1/nmdc_wfrqc-11-sag5p435.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2192712dc05c20684d9dd64c7fff23d nmdc:dobj-11-40qpkz54 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-n1qd7513.1/nmdc_wfrqc-11-n1qd7513.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2192712dc05c20684d9dd64c7fff23d nmdc:dobj-11-zka0tv39 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sag5p435.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfrqc-11-sag5p435.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n1qd7513.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfrqc-11-n1qd7513.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-vn1ar862 -INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-tm0d3g71.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1 +INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-zwx3ad55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-zwx3ad55.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:958b61e9f607403322034a4665030355 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:958b61e9f607403322034a4665030355 nmdc:dobj-11-yxs23z13 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-zwx3ad55.1/nmdc_wfmgas-11-zwx3ad55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:958b61e9f607403322034a4665030355 nmdc:dobj-11-c3e9s312 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zwx3ad55.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:671a6e23049e517f506961cfd20861ef -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:671a6e23049e517f506961cfd20861ef nmdc:dobj-11-8fjkgz21 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-zwx3ad55.1/nmdc_wfmgas-11-zwx3ad55.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:671a6e23049e517f506961cfd20861ef nmdc:dobj-11-53a82s21 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zwx3ad55.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2cdbb7442338ecf9db8716b5035a5215 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cdbb7442338ecf9db8716b5035a5215 nmdc:dobj-11-kycyvn80 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-zwx3ad55.1/nmdc_wfmgas-11-zwx3ad55.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cdbb7442338ecf9db8716b5035a5215 nmdc:dobj-11-fh4hg367 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zwx3ad55.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:35cf7defb880a0b170763cb8195ef93f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35cf7defb880a0b170763cb8195ef93f nmdc:dobj-11-dc464178 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-zwx3ad55.1/nmdc_wfmgas-11-zwx3ad55.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35cf7defb880a0b170763cb8195ef93f nmdc:dobj-11-v69dkf58 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zwx3ad55.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d899a65109456d3c071422ed902f1f2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d899a65109456d3c071422ed902f1f2 nmdc:dobj-11-fwbksn72 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-zwx3ad55.1/nmdc_wfmgas-11-zwx3ad55.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d899a65109456d3c071422ed902f1f2 nmdc:dobj-11-340fpy68 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfmgas-11-tm0d3g71.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zwx3ad55.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfmgas-11-zwx3ad55.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-vn1ar862 -INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kaez2s58.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1 +INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-5xtn5814.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 nmdc:dobj-11-wksvq124 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 nmdc:dobj-11-78s0br24 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2328978e8c33fda06a5a5895b80c8241 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2328978e8c33fda06a5a5895b80c8241 nmdc:dobj-11-ssab8s41 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2328978e8c33fda06a5a5895b80c8241 nmdc:dobj-11-fq795154 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7dfa51d15f43c61bee02de8638c6c077 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dfa51d15f43c61bee02de8638c6c077 nmdc:dobj-11-t0rfh883 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dfa51d15f43c61bee02de8638c6c077 nmdc:dobj-11-fd500612 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1e866752a2f454f73d8aebae359c4e7 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1e866752a2f454f73d8aebae359c4e7 nmdc:dobj-11-9ctkt131 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1e866752a2f454f73d8aebae359c4e7 nmdc:dobj-11-a5hwtf20 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03459c5c2cf0e48a33083f182bba3a17 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03459c5c2cf0e48a33083f182bba3a17 nmdc:dobj-11-7xt20795 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03459c5c2cf0e48a33083f182bba3a17 nmdc:dobj-11-ewncns75 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f1a598e4b9143836d1dc3b3db23cdf94 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1a598e4b9143836d1dc3b3db23cdf94 nmdc:dobj-11-0dgzxp34 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1a598e4b9143836d1dc3b3db23cdf94 nmdc:dobj-11-ee34h819 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 nmdc:dobj-11-9q1yc861 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 nmdc:dobj-11-aeezkj67 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c698b534da4300aa2dfc3c1165dbaab -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c698b534da4300aa2dfc3c1165dbaab nmdc:dobj-11-4ktypz36 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c698b534da4300aa2dfc3c1165dbaab nmdc:dobj-11-gf2wnq07 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fc11e1963abfe9f0ab36d766c9eb1ea -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc11e1963abfe9f0ab36d766c9eb1ea nmdc:dobj-11-6rz08t45 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-5xtn5814.1/nmdc_wfrbt-11-5xtn5814.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc11e1963abfe9f0ab36d766c9eb1ea nmdc:dobj-11-4gxkzd60 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfrbt-11-kaez2s58.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xtn5814.1_kraken2_krona.html 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path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-5bckeh82.1/nmdc_wfrbt-11-5bckeh82.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:63295a9f37f072ec50f1cc068b10a3da nmdc:dobj-11-zgnac007 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-g32k0v96.1/nmdc_wfrbt-11-g32k0v96.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:63295a9f37f072ec50f1cc068b10a3da nmdc:dobj-11-6whsvy24 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-f1fe9370 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5bckeh82.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g32k0v96.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93505187db42e12c4de160c3baed5d0c -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-5bckeh82.1/nmdc_wfrbt-11-5bckeh82.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93505187db42e12c4de160c3baed5d0c nmdc:dobj-11-ad1mpq86 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-g32k0v96.1/nmdc_wfrbt-11-g32k0v96.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93505187db42e12c4de160c3baed5d0c nmdc:dobj-11-vb2yjq12 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-f1fe9370 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5bckeh82.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g32k0v96.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e166b8ead19eb664d59f46d1a6c22059 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-5bckeh82.1/nmdc_wfrbt-11-5bckeh82.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e166b8ead19eb664d59f46d1a6c22059 nmdc:dobj-11-yj0y4x55 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-g32k0v96.1/nmdc_wfrbt-11-g32k0v96.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e166b8ead19eb664d59f46d1a6c22059 nmdc:dobj-11-eysv8m58 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-f1fe9370 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5bckeh82.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g32k0v96.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1d8d68b80c2c2c0caa60cb3b047d1a64 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-5bckeh82.1/nmdc_wfrbt-11-5bckeh82.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d8d68b80c2c2c0caa60cb3b047d1a64 nmdc:dobj-11-qpfgr410 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-g32k0v96.1/nmdc_wfrbt-11-g32k0v96.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d8d68b80c2c2c0caa60cb3b047d1a64 nmdc:dobj-11-eb84gv91 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-f1fe9370 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5bckeh82.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cb6219ddfd401f6364aaac52f89adacd nmdc:wfrbt-11-5bckeh82.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g32k0v96.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cb6219ddfd401f6364aaac52f89adacd nmdc:wfrbt-11-g32k0v96.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-f1fe9370 INFO:root:omics_processing_id: nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:acee10e153052c8b7bc98c2fe462fdd9 nmdc:dobj-11-axs5rq34 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:acee10e153052c8b7bc98c2fe462fdd9 nmdc:dobj-11-bynqm156 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-fvhfvp91 -INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dq5nvq80.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-dq5nvq80.1 +INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-kvp8tj75.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-kvp8tj75.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-dq5nvq80.1/nmdc_wfrqc-11-dq5nvq80.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 nmdc:dobj-11-s8amh137 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-kvp8tj75.1/nmdc_wfrqc-11-kvp8tj75.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 nmdc:dobj-11-t8ned735 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dq5nvq80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kvp8tj75.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b66b8bd45f2be22655bf6687aace8976 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-dq5nvq80.1/nmdc_wfrqc-11-dq5nvq80.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b66b8bd45f2be22655bf6687aace8976 nmdc:dobj-11-hfmfj538 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-kvp8tj75.1/nmdc_wfrqc-11-kvp8tj75.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b66b8bd45f2be22655bf6687aace8976 nmdc:dobj-11-7w0nwa15 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dq5nvq80.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfrqc-11-dq5nvq80.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kvp8tj75.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfrqc-11-kvp8tj75.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-fvhfvp91 -INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-d3gp2z47.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1 +INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7bjq7w21.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-7bjq7w21.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:447d8460a5baeef3df16d74ace1aed5a -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:447d8460a5baeef3df16d74ace1aed5a nmdc:dobj-11-rtb4bz26 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-7bjq7w21.1/nmdc_wfmgas-11-7bjq7w21.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:447d8460a5baeef3df16d74ace1aed5a nmdc:dobj-11-8r671g21 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7bjq7w21.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47d3dae6f07a5e91fdb438933591353d -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d3dae6f07a5e91fdb438933591353d nmdc:dobj-11-nyz50160 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-7bjq7w21.1/nmdc_wfmgas-11-7bjq7w21.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d3dae6f07a5e91fdb438933591353d nmdc:dobj-11-6pw5g262 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7bjq7w21.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e762343ae2d052da184e7437fcd8e697 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e762343ae2d052da184e7437fcd8e697 nmdc:dobj-11-yg5kda75 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-7bjq7w21.1/nmdc_wfmgas-11-7bjq7w21.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e762343ae2d052da184e7437fcd8e697 nmdc:dobj-11-sv1dp448 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7bjq7w21.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b067aacc722dec7f7d5bf6bcb0627dd8 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b067aacc722dec7f7d5bf6bcb0627dd8 nmdc:dobj-11-hggb9t89 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-7bjq7w21.1/nmdc_wfmgas-11-7bjq7w21.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b067aacc722dec7f7d5bf6bcb0627dd8 nmdc:dobj-11-2q6van55 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7bjq7w21.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13569543ba23307e5be94771b7e840bc -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13569543ba23307e5be94771b7e840bc nmdc:dobj-11-jh5ger42 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-7bjq7w21.1/nmdc_wfmgas-11-7bjq7w21.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13569543ba23307e5be94771b7e840bc nmdc:dobj-11-vt9w5v31 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfmgas-11-d3gp2z47.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7bjq7w21.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfmgas-11-7bjq7w21.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-fvhfvp91 -INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-z381n812.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1 +INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-pe0t0b98.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31070d6b6936b8d60f2e50ce54e810e9 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31070d6b6936b8d60f2e50ce54e810e9 nmdc:dobj-11-px7f6m27 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31070d6b6936b8d60f2e50ce54e810e9 nmdc:dobj-11-73rpz468 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da65b05b21fcf8d956b23d4d890513b7 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da65b05b21fcf8d956b23d4d890513b7 nmdc:dobj-11-2cc1vh65 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da65b05b21fcf8d956b23d4d890513b7 nmdc:dobj-11-c1tmg272 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2dd3e449e4fd7f507ef6f45771e58fea -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2dd3e449e4fd7f507ef6f45771e58fea nmdc:dobj-11-wwvpsr34 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2dd3e449e4fd7f507ef6f45771e58fea nmdc:dobj-11-h9x07d20 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:761eaf4bdfc92c48be812f522d6a2d7c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:761eaf4bdfc92c48be812f522d6a2d7c nmdc:dobj-11-mbrd5088 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:761eaf4bdfc92c48be812f522d6a2d7c nmdc:dobj-11-ssgm7x58 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ca4588825f056c60678304f4ece7354 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ca4588825f056c60678304f4ece7354 nmdc:dobj-11-08qec104 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ca4588825f056c60678304f4ece7354 nmdc:dobj-11-z3yr8j50 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51c6216d13cc32e0241d8a9ea665aaae -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51c6216d13cc32e0241d8a9ea665aaae nmdc:dobj-11-zcvg3s26 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51c6216d13cc32e0241d8a9ea665aaae nmdc:dobj-11-1rcgwk27 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c68c5efe3a3c690263e9f7b46d20c680 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c68c5efe3a3c690263e9f7b46d20c680 nmdc:dobj-11-rpgbqq46 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c68c5efe3a3c690263e9f7b46d20c680 nmdc:dobj-11-bq5v4e70 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44b662598ea9b8e73f3cc113a1700ac8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44b662598ea9b8e73f3cc113a1700ac8 nmdc:dobj-11-5yxcrz14 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44b662598ea9b8e73f3cc113a1700ac8 nmdc:dobj-11-kwqwy615 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cedec6a5585e1f6e000aeed9fd24dbfa -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cedec6a5585e1f6e000aeed9fd24dbfa nmdc:dobj-11-j6ycva62 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-pe0t0b98.1/nmdc_wfrbt-11-pe0t0b98.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cedec6a5585e1f6e000aeed9fd24dbfa nmdc:dobj-11-ngdh0212 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfrbt-11-z381n812.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pe0t0b98.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfrbt-11-pe0t0b98.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-fvhfvp91 INFO:root:omics_processing_id: nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:091325e3152cae4d694e2bbf5b7093db nmdc:dobj-11-rrnpzr55 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:091325e3152cae4d694e2bbf5b7093db nmdc:dobj-11-je2ra937 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m990x183 -INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zxkqwk40.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-zxkqwk40.1 +INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7qbdgn10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-7qbdgn10.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bc47b35ff45ea1f95f32a9143bc60a7 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-zxkqwk40.1/nmdc_wfrqc-11-zxkqwk40.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bc47b35ff45ea1f95f32a9143bc60a7 nmdc:dobj-11-d5q8eq74 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-7qbdgn10.1/nmdc_wfrqc-11-7qbdgn10.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bc47b35ff45ea1f95f32a9143bc60a7 nmdc:dobj-11-v4k18f45 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zxkqwk40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7qbdgn10.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8dfc11d03dc15312fff75d2d98091c72 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-zxkqwk40.1/nmdc_wfrqc-11-zxkqwk40.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dfc11d03dc15312fff75d2d98091c72 nmdc:dobj-11-wdqh0m12 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-7qbdgn10.1/nmdc_wfrqc-11-7qbdgn10.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dfc11d03dc15312fff75d2d98091c72 nmdc:dobj-11-thk7d144 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zxkqwk40.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfrqc-11-zxkqwk40.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7qbdgn10.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfrqc-11-7qbdgn10.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m990x183 -INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qzwadf23.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1 +INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-z10ays56.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-z10ays56.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73fb1fad2ba63e15932b314b73286aa4 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73fb1fad2ba63e15932b314b73286aa4 nmdc:dobj-11-ye9dfg22 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-z10ays56.1/nmdc_wfmgas-11-z10ays56.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73fb1fad2ba63e15932b314b73286aa4 nmdc:dobj-11-wd1f8r17 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z10ays56.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e126ec5123915148fea43200b0129d1 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e126ec5123915148fea43200b0129d1 nmdc:dobj-11-b2hdn804 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-z10ays56.1/nmdc_wfmgas-11-z10ays56.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e126ec5123915148fea43200b0129d1 nmdc:dobj-11-7q1x4s55 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z10ays56.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66587bdf30209e48bdc5c0555c8d3c91 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66587bdf30209e48bdc5c0555c8d3c91 nmdc:dobj-11-ym0r7y21 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-z10ays56.1/nmdc_wfmgas-11-z10ays56.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66587bdf30209e48bdc5c0555c8d3c91 nmdc:dobj-11-zf4var62 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z10ays56.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe15d11d1cb57b25196f91742fc42007 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe15d11d1cb57b25196f91742fc42007 nmdc:dobj-11-11qxy831 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-z10ays56.1/nmdc_wfmgas-11-z10ays56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe15d11d1cb57b25196f91742fc42007 nmdc:dobj-11-de7s8a13 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z10ays56.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2822f8e3c727b92fe32c02907ea483c3 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2822f8e3c727b92fe32c02907ea483c3 nmdc:dobj-11-aj60yq22 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-z10ays56.1/nmdc_wfmgas-11-z10ays56.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2822f8e3c727b92fe32c02907ea483c3 nmdc:dobj-11-n43hf776 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfmgas-11-qzwadf23.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z10ays56.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfmgas-11-z10ays56.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m990x183 -INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kes57604.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1 +INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-4svyw857.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c08a38ec232296a9e1375d320b82f70 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c08a38ec232296a9e1375d320b82f70 nmdc:dobj-11-qpyatn94 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c08a38ec232296a9e1375d320b82f70 nmdc:dobj-11-j53abx37 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bc9789f2ba5b43578924cdee86c8069 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bc9789f2ba5b43578924cdee86c8069 nmdc:dobj-11-5kwj5t55 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bc9789f2ba5b43578924cdee86c8069 nmdc:dobj-11-nm4vns17 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60cd89cae748fbf618f821d0967f8882 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60cd89cae748fbf618f821d0967f8882 nmdc:dobj-11-abxf8r02 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60cd89cae748fbf618f821d0967f8882 nmdc:dobj-11-t7ht5x50 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:27a73190e6197cffeecf2de17075aaf5 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27a73190e6197cffeecf2de17075aaf5 nmdc:dobj-11-js0xcn51 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27a73190e6197cffeecf2de17075aaf5 nmdc:dobj-11-c3we5820 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d19a860a2ccadd00fbba8c5f6e9feffc -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d19a860a2ccadd00fbba8c5f6e9feffc nmdc:dobj-11-ep823j37 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d19a860a2ccadd00fbba8c5f6e9feffc nmdc:dobj-11-p519y415 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe497a4e41456277815a2f528d02134d -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe497a4e41456277815a2f528d02134d nmdc:dobj-11-ppgms587 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe497a4e41456277815a2f528d02134d nmdc:dobj-11-99j1wn86 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39aba2cd0681e634e5a856a1643ad65d -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39aba2cd0681e634e5a856a1643ad65d nmdc:dobj-11-s46e0d36 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39aba2cd0681e634e5a856a1643ad65d nmdc:dobj-11-hwb2vg42 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 nmdc:dobj-11-prncv373 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 nmdc:dobj-11-5wadf886 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b6eae3f25e58068ee532e869d9a054e7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6eae3f25e58068ee532e869d9a054e7 nmdc:dobj-11-0vqz0v19 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-4svyw857.1/nmdc_wfrbt-11-4svyw857.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6eae3f25e58068ee532e869d9a054e7 nmdc:dobj-11-kcs5gr92 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfrbt-11-kes57604.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4svyw857.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfrbt-11-4svyw857.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m990x183 INFO:root:omics_processing_id: nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00a2071567e1e8e58bef5263fbdf7905 nmdc:dobj-11-5b9jwv66 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00a2071567e1e8e58bef5263fbdf7905 nmdc:dobj-11-gcffy910 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-dh7zcy95 -INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hdd0rr38.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-hdd0rr38.1 +INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-6ep13g87.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-6ep13g87.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e0f21bfc209282f65927d4184775f35 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-hdd0rr38.1/nmdc_wfrqc-11-hdd0rr38.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0f21bfc209282f65927d4184775f35 nmdc:dobj-11-msy96421 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-6ep13g87.1/nmdc_wfrqc-11-6ep13g87.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0f21bfc209282f65927d4184775f35 nmdc:dobj-11-8w6sk203 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hdd0rr38.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6ep13g87.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45cc170af2c7cfacee3f72776f129239 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-hdd0rr38.1/nmdc_wfrqc-11-hdd0rr38.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45cc170af2c7cfacee3f72776f129239 nmdc:dobj-11-ap6sp423 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-6ep13g87.1/nmdc_wfrqc-11-6ep13g87.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45cc170af2c7cfacee3f72776f129239 nmdc:dobj-11-e7k2e675 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hdd0rr38.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfrqc-11-hdd0rr38.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6ep13g87.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfrqc-11-6ep13g87.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-dh7zcy95 -INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-fxqctf12.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1 +INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ex2gcn35.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-ex2gcn35.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:896e7cf242e38d56af717f0cc31b4350 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:896e7cf242e38d56af717f0cc31b4350 nmdc:dobj-11-5p3b7z63 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-ex2gcn35.1/nmdc_wfmgas-11-ex2gcn35.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:896e7cf242e38d56af717f0cc31b4350 nmdc:dobj-11-zg8jdy54 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ex2gcn35.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13c5321b515278681bf7813472ac1fd9 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13c5321b515278681bf7813472ac1fd9 nmdc:dobj-11-t95gd305 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-ex2gcn35.1/nmdc_wfmgas-11-ex2gcn35.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13c5321b515278681bf7813472ac1fd9 nmdc:dobj-11-gwt63q56 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ex2gcn35.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96cb29c54fd6ec82513ce930cb9773d2 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96cb29c54fd6ec82513ce930cb9773d2 nmdc:dobj-11-7kvmnq05 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-ex2gcn35.1/nmdc_wfmgas-11-ex2gcn35.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96cb29c54fd6ec82513ce930cb9773d2 nmdc:dobj-11-8r7vn686 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ex2gcn35.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4daba0991ac1ce4862bb25228a74d8ca -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4daba0991ac1ce4862bb25228a74d8ca nmdc:dobj-11-9pw3hg72 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-ex2gcn35.1/nmdc_wfmgas-11-ex2gcn35.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4daba0991ac1ce4862bb25228a74d8ca nmdc:dobj-11-vwcdr359 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ex2gcn35.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f6065de3d4d80ef2c2d6e6bd26591fd -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:380f82c8f45c6944c6bf7db3cfe57cc8 nmdc:dobj-11-rznjgh98 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:380f82c8f45c6944c6bf7db3cfe57cc8 nmdc:dobj-11-yd6hpw74 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c5acddf8bf9749557d7883f0dd8b269d -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5acddf8bf9749557d7883f0dd8b269d nmdc:dobj-11-pyq3wk29 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5acddf8bf9749557d7883f0dd8b269d nmdc:dobj-11-dh3p7b31 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5a236324d2ce1127f901c9759af3f84 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5a236324d2ce1127f901c9759af3f84 nmdc:dobj-11-nykpae24 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5a236324d2ce1127f901c9759af3f84 nmdc:dobj-11-fkdafy17 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85a5ffb12f7438775590755a36bc23ef -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85a5ffb12f7438775590755a36bc23ef nmdc:dobj-11-t5fmf465 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85a5ffb12f7438775590755a36bc23ef nmdc:dobj-11-cwkhyy12 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd073d847659d5157e3cb65ed98c0cd5 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd073d847659d5157e3cb65ed98c0cd5 nmdc:dobj-11-mew4px86 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd073d847659d5157e3cb65ed98c0cd5 nmdc:dobj-11-aqpa1t11 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:97f568b222020dacabc6c313c893225e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97f568b222020dacabc6c313c893225e nmdc:dobj-11-vzvck593 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97f568b222020dacabc6c313c893225e nmdc:dobj-11-r8s9zb85 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8907cd3d12fc07d5ae19eccf6dc117fa -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8907cd3d12fc07d5ae19eccf6dc117fa nmdc:dobj-11-pc76r414 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8907cd3d12fc07d5ae19eccf6dc117fa nmdc:dobj-11-pv5ske15 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0d4aec24449645364b0bdb57d7de722f -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d4aec24449645364b0bdb57d7de722f nmdc:dobj-11-ff5k7706 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d4aec24449645364b0bdb57d7de722f nmdc:dobj-11-h82kcm45 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61cef9a17ea4c982cfe3b3e4ac7415d6 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61cef9a17ea4c982cfe3b3e4ac7415d6 nmdc:dobj-11-6ajc0f04 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-hqsszj70.1/nmdc_wfrbt-11-hqsszj70.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61cef9a17ea4c982cfe3b3e4ac7415d6 nmdc:dobj-11-9z0geh69 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfrbt-11-qsyqv423.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hqsszj70.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfrbt-11-hqsszj70.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-dh7zcy95 INFO:root:omics_processing_id: nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe61b5e7c3aff7b27e5be1f97f55efda nmdc:dobj-11-3p67xr31 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe61b5e7c3aff7b27e5be1f97f55efda nmdc:dobj-11-mpk4ce73 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-v7vx4v18 -INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-h8ewnd41.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-h8ewnd41.1 +INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xrp05p94.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-xrp05p94.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:576fc5e7df52ca50320b49075f2b4ef4 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-h8ewnd41.1/nmdc_wfrqc-11-h8ewnd41.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:576fc5e7df52ca50320b49075f2b4ef4 nmdc:dobj-11-m6xh1x97 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-xrp05p94.1/nmdc_wfrqc-11-xrp05p94.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:576fc5e7df52ca50320b49075f2b4ef4 nmdc:dobj-11-y8m43r12 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h8ewnd41.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xrp05p94.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16735277dc68cdfdf4a0286b680f0584 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-h8ewnd41.1/nmdc_wfrqc-11-h8ewnd41.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16735277dc68cdfdf4a0286b680f0584 nmdc:dobj-11-r7webm87 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-xrp05p94.1/nmdc_wfrqc-11-xrp05p94.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16735277dc68cdfdf4a0286b680f0584 nmdc:dobj-11-dt49af80 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h8ewnd41.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfrqc-11-h8ewnd41.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xrp05p94.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfrqc-11-xrp05p94.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-v7vx4v18 -INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-h3kmym36.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1 +INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wh674d85.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-wh674d85.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50c99b3e08df9fc9d07649afdc61364b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50c99b3e08df9fc9d07649afdc61364b nmdc:dobj-11-gbxcww47 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-wh674d85.1/nmdc_wfmgas-11-wh674d85.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50c99b3e08df9fc9d07649afdc61364b nmdc:dobj-11-d9xc0m61 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wh674d85.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:68e888dba633139fb85132685e5db148 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68e888dba633139fb85132685e5db148 nmdc:dobj-11-44t9wf76 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-wh674d85.1/nmdc_wfmgas-11-wh674d85.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68e888dba633139fb85132685e5db148 nmdc:dobj-11-mejeq924 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wh674d85.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f124bfc6fad15138f2ac7f37ad716773 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f124bfc6fad15138f2ac7f37ad716773 nmdc:dobj-11-2gfpat07 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-wh674d85.1/nmdc_wfmgas-11-wh674d85.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f124bfc6fad15138f2ac7f37ad716773 nmdc:dobj-11-rajn7z68 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wh674d85.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8558a765a73d18aaa92d6cda63b1009f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8558a765a73d18aaa92d6cda63b1009f nmdc:dobj-11-tqprzj27 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-wh674d85.1/nmdc_wfmgas-11-wh674d85.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8558a765a73d18aaa92d6cda63b1009f nmdc:dobj-11-1pzzfg13 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wh674d85.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1f516729d4b43717221b9a070779b0c -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1f516729d4b43717221b9a070779b0c nmdc:dobj-11-xv3ref06 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-wh674d85.1/nmdc_wfmgas-11-wh674d85.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1f516729d4b43717221b9a070779b0c nmdc:dobj-11-6rbtez79 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfmgas-11-h3kmym36.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wh674d85.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfmgas-11-wh674d85.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-v7vx4v18 -INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-q6hxf922.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1 +INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-r8c88137.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16be67531d9be2bf5dff60892a736e6d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16be67531d9be2bf5dff60892a736e6d nmdc:dobj-11-jxx4w727 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16be67531d9be2bf5dff60892a736e6d nmdc:dobj-11-f49h3b49 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10d83e69db2f76a5b21c010d627401f2 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10d83e69db2f76a5b21c010d627401f2 nmdc:dobj-11-hjvv1647 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10d83e69db2f76a5b21c010d627401f2 nmdc:dobj-11-h487y814 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4967d9a0b3c1c769273f32bb536cef1a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4967d9a0b3c1c769273f32bb536cef1a nmdc:dobj-11-n5b8nt54 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4967d9a0b3c1c769273f32bb536cef1a nmdc:dobj-11-dbpyj980 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6914d1f0b178d2b8b96a63066b368db2 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6914d1f0b178d2b8b96a63066b368db2 nmdc:dobj-11-kqmdv351 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6914d1f0b178d2b8b96a63066b368db2 nmdc:dobj-11-5w8d9869 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b8e79d2cf1780851ac71bd0ec51778f -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b8e79d2cf1780851ac71bd0ec51778f nmdc:dobj-11-hx4r6d47 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b8e79d2cf1780851ac71bd0ec51778f nmdc:dobj-11-df10k658 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6fd2822d1a3642667ad4df25ce2b6554 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fd2822d1a3642667ad4df25ce2b6554 nmdc:dobj-11-ny1q6286 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fd2822d1a3642667ad4df25ce2b6554 nmdc:dobj-11-gbqsvb92 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 nmdc:dobj-11-7kc5mt63 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 nmdc:dobj-11-zm820h78 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1efcea7031226523445910e22be4c2a8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1efcea7031226523445910e22be4c2a8 nmdc:dobj-11-vb6p3m63 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1efcea7031226523445910e22be4c2a8 nmdc:dobj-11-fxe9w350 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e43961184c283ad2c396054f79648b7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e43961184c283ad2c396054f79648b7 nmdc:dobj-11-hj9ynw95 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-r8c88137.1/nmdc_wfrbt-11-r8c88137.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e43961184c283ad2c396054f79648b7 nmdc:dobj-11-areb6452 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfrbt-11-q6hxf922.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r8c88137.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfrbt-11-r8c88137.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-v7vx4v18 INFO:root:omics_processing_id: nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3896cc46b145ba465c67a164e7446400 nmdc:dobj-11-mseeh213 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3896cc46b145ba465c67a164e7446400 nmdc:dobj-11-abmzqm55 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m6q4nw59 -INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5fy6qz48.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-5fy6qz48.1 +INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-k6krxm24.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-k6krxm24.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7a38fec7d52c8fbb2a094bf8ca9db24e -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-5fy6qz48.1/nmdc_wfrqc-11-5fy6qz48.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7a38fec7d52c8fbb2a094bf8ca9db24e nmdc:dobj-11-1j1pzk27 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-k6krxm24.1/nmdc_wfrqc-11-k6krxm24.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7a38fec7d52c8fbb2a094bf8ca9db24e nmdc:dobj-11-3r4dra19 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5fy6qz48.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k6krxm24.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7dc1bff51751b071366b1d582cc6c00 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-5fy6qz48.1/nmdc_wfrqc-11-5fy6qz48.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7dc1bff51751b071366b1d582cc6c00 nmdc:dobj-11-vbcywc13 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-k6krxm24.1/nmdc_wfrqc-11-k6krxm24.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7dc1bff51751b071366b1d582cc6c00 nmdc:dobj-11-gnxeej44 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5fy6qz48.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfrqc-11-5fy6qz48.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k6krxm24.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfrqc-11-k6krxm24.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m6q4nw59 -INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-1bb8xt28.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1 +INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rrdjdg83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-rrdjdg83.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c906280a84b91d4ac4fcc9afdc82540 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c906280a84b91d4ac4fcc9afdc82540 nmdc:dobj-11-e2jxc312 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-rrdjdg83.1/nmdc_wfmgas-11-rrdjdg83.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c906280a84b91d4ac4fcc9afdc82540 nmdc:dobj-11-cpge5994 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrdjdg83.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 nmdc:dobj-11-e09wpr59 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-rrdjdg83.1/nmdc_wfmgas-11-rrdjdg83.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 nmdc:dobj-11-9tvr2f24 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrdjdg83.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94be8bdc393ccff73573e126cf3c1718 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94be8bdc393ccff73573e126cf3c1718 nmdc:dobj-11-4p7e2b36 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-rrdjdg83.1/nmdc_wfmgas-11-rrdjdg83.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94be8bdc393ccff73573e126cf3c1718 nmdc:dobj-11-bx2bxv50 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrdjdg83.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 nmdc:dobj-11-k1vp0n62 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-rrdjdg83.1/nmdc_wfmgas-11-rrdjdg83.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 nmdc:dobj-11-54sv6s67 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrdjdg83.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:949f2181d65b8922aa60e6d59ac02711 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:949f2181d65b8922aa60e6d59ac02711 nmdc:dobj-11-y3fvxm24 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-rrdjdg83.1/nmdc_wfmgas-11-rrdjdg83.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:949f2181d65b8922aa60e6d59ac02711 nmdc:dobj-11-ewr8ej26 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfmgas-11-1bb8xt28.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrdjdg83.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfmgas-11-rrdjdg83.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m6q4nw59 -INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-0z5s9619.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1 +INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-tftsby72.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12f872dde3c3b6dee75bf41e88515852 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12f872dde3c3b6dee75bf41e88515852 nmdc:dobj-11-ah0fbx62 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12f872dde3c3b6dee75bf41e88515852 nmdc:dobj-11-caqxtj95 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:389a79d0558c6dcff23934998dd96b07 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:389a79d0558c6dcff23934998dd96b07 nmdc:dobj-11-399q3c76 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:389a79d0558c6dcff23934998dd96b07 nmdc:dobj-11-1f8krm62 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ca4a2523df1827f60864aa9441e09fba -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca4a2523df1827f60864aa9441e09fba nmdc:dobj-11-5genm415 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca4a2523df1827f60864aa9441e09fba nmdc:dobj-11-5sq90044 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:895bff8e573da1a654e7b2b48a9aa6d0 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:895bff8e573da1a654e7b2b48a9aa6d0 nmdc:dobj-11-sxw50t59 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:895bff8e573da1a654e7b2b48a9aa6d0 nmdc:dobj-11-ns4sjr57 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b1e862ed0340a16d8a3baed056f2934 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b1e862ed0340a16d8a3baed056f2934 nmdc:dobj-11-89hwy179 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b1e862ed0340a16d8a3baed056f2934 nmdc:dobj-11-qd2k7a16 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a8696952be8a44279ee1fbd0b0e2834 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a8696952be8a44279ee1fbd0b0e2834 nmdc:dobj-11-crgkm745 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a8696952be8a44279ee1fbd0b0e2834 nmdc:dobj-11-5k3g6175 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84f9f57372a2980b08cb12fd17800b28 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84f9f57372a2980b08cb12fd17800b28 nmdc:dobj-11-mcd6e619 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84f9f57372a2980b08cb12fd17800b28 nmdc:dobj-11-4ngm1t07 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4aa13bef1460c6e06f6bcb09b184894c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4aa13bef1460c6e06f6bcb09b184894c nmdc:dobj-11-9vktxz05 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4aa13bef1460c6e06f6bcb09b184894c nmdc:dobj-11-eh681y76 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:806b36d02366596de52d702a8bc60f5b -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:806b36d02366596de52d702a8bc60f5b nmdc:dobj-11-834sy362 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-tftsby72.1/nmdc_wfrbt-11-tftsby72.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:806b36d02366596de52d702a8bc60f5b nmdc:dobj-11-eaqck677 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfrbt-11-0z5s9619.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tftsby72.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfrbt-11-tftsby72.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m6q4nw59 INFO:root:omics_processing_id: nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e444ada18237f6db32de92516773b0d5 nmdc:dobj-11-zz24ba40 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e444ada18237f6db32de92516773b0d5 nmdc:dobj-11-hb8rds73 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-jn4z8y81 -INFO:root:New activity id created for nmdc:omprc-11-jn4z8y81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0r7qzp66.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrqc-11-0r7qzp66.1 +INFO:root:New activity id created for nmdc:omprc-11-jn4z8y81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-wftqqy32.1 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nmdc:4bc80f2b19100437061d229234925f77 nmdc:wfrqc-11-0r7qzp66.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wftqqy32.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4bc80f2b19100437061d229234925f77 nmdc:wfrqc-11-wftqqy32.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-jn4z8y81 -INFO:root:New activity id created for nmdc:omprc-11-jn4z8y81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-69bny395.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-69bny395.1 +INFO:root:New activity id created for nmdc:omprc-11-jn4z8y81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-cjzscm41.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-cjzscm41.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f8a32182da7e995f36abdf2c97b02ef3 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-69bny395.1/nmdc_wfmgas-11-69bny395.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8a32182da7e995f36abdf2c97b02ef3 nmdc:dobj-11-gypqhw56 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-cjzscm41.1/nmdc_wfmgas-11-cjzscm41.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8a32182da7e995f36abdf2c97b02ef3 nmdc:dobj-11-bfw41g32 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-69bny395.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cjzscm41.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe4273654869d5be23aaa9db11f716ba -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-69bny395.1/nmdc_wfmgas-11-69bny395.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43af1044fb76662a430a3490042bfc6c nmdc:dobj-11-01nrr454 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-cjzscm41.1/nmdc_wfmgas-11-cjzscm41.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43af1044fb76662a430a3490042bfc6c nmdc:dobj-11-aqxxhe79 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-69bny395.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cjzscm41.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be81ebec4e6ae2495cc0a35da3522db2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-69bny395.1/nmdc_wfmgas-11-69bny395.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be81ebec4e6ae2495cc0a35da3522db2 nmdc:dobj-11-b5xay729 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-cjzscm41.1/nmdc_wfmgas-11-cjzscm41.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be81ebec4e6ae2495cc0a35da3522db2 nmdc:dobj-11-ckkera35 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-69bny395.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4bc80f2b19100437061d229234925f77 nmdc:wfmgas-11-69bny395.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cjzscm41.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4bc80f2b19100437061d229234925f77 nmdc:wfmgas-11-cjzscm41.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-jn4z8y81 -INFO:root:New activity id created for nmdc:omprc-11-jn4z8y81 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-5qw7za93.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1 +INFO:root:New activity id created for nmdc:omprc-11-jn4z8y81 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-m5qxyn34.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ac031898fdd3ead4dfcdbcdbdf241e5 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ac031898fdd3ead4dfcdbcdbdf241e5 nmdc:dobj-11-x6v0p092 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ac031898fdd3ead4dfcdbcdbdf241e5 nmdc:dobj-11-3yfdhf95 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73f86f2c973b377285bff389e68a79e8 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73f86f2c973b377285bff389e68a79e8 nmdc:dobj-11-b96tjk52 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73f86f2c973b377285bff389e68a79e8 nmdc:dobj-11-b23x4931 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 nmdc:dobj-11-sj2wk850 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 nmdc:dobj-11-vbm8cp83 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee79753220c12a7c03213ca71f75b799 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee79753220c12a7c03213ca71f75b799 nmdc:dobj-11-tbr5gn10 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee79753220c12a7c03213ca71f75b799 nmdc:dobj-11-0c91r424 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:509cbd216ab75caea93f045f313d5f99 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:509cbd216ab75caea93f045f313d5f99 nmdc:dobj-11-zm9bxe70 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:509cbd216ab75caea93f045f313d5f99 nmdc:dobj-11-7bq7wn15 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ede0ed26db514191367b0b58d983813d -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ede0ed26db514191367b0b58d983813d nmdc:dobj-11-3r66cd76 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ede0ed26db514191367b0b58d983813d nmdc:dobj-11-gr85n666 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66802c0e650c028f42b2ea50a3d91112 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66802c0e650c028f42b2ea50a3d91112 nmdc:dobj-11-5a04be45 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66802c0e650c028f42b2ea50a3d91112 nmdc:dobj-11-3gfxas46 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f698ef97a5f22ea749033d9ab4457b89 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f698ef97a5f22ea749033d9ab4457b89 nmdc:dobj-11-608xew66 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f698ef97a5f22ea749033d9ab4457b89 nmdc:dobj-11-mg1a7r45 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71120d925f8faf51dd9b0042006209f8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71120d925f8faf51dd9b0042006209f8 nmdc:dobj-11-pv7h5380 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-m5qxyn34.1/nmdc_wfrbt-11-m5qxyn34.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71120d925f8faf51dd9b0042006209f8 nmdc:dobj-11-2m4azd84 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4bc80f2b19100437061d229234925f77 nmdc:wfrbt-11-5qw7za93.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5qxyn34.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4bc80f2b19100437061d229234925f77 nmdc:wfrbt-11-m5qxyn34.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-jn4z8y81 INFO:root:omics_processing_id: nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d2ea6cc3c176479f6355a6716bf0279 nmdc:dobj-11-6pc41b94 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d2ea6cc3c176479f6355a6716bf0279 nmdc:dobj-11-gjgrgy70 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-3d7ev832 -INFO:root:New activity id created for nmdc:omprc-11-3d7ev832 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-85t34t27.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrqc-11-85t34t27.1 +INFO:root:New activity id created for nmdc:omprc-11-3d7ev832 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-crsywk79.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-s44kbk81.1/nmdc_wfmgas-11-s44kbk81.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6585b5e80d7700342c4aa37eec8d8805 nmdc:dobj-11-kmmsfm38 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-3k6g0t47.1/nmdc_wfmgas-11-3k6g0t47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6585b5e80d7700342c4aa37eec8d8805 nmdc:dobj-11-n7f01m73 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s44kbk81.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3k6g0t47.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13a8624df8f7d9b939c9fb270a26e312 -INFO:root:New file path computed for Assembly AGP: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8656547aa697221a5232f049f7592306 nmdc:dobj-11-29jpxc65 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-vne3e069.1/nmdc_wfrbt-11-vne3e069.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8656547aa697221a5232f049f7592306 nmdc:dobj-11-rzqsr586 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vne3e069.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fa9d96b295c71a8046986782df92fd5 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fa9d96b295c71a8046986782df92fd5 nmdc:dobj-11-dkt70h53 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-vne3e069.1/nmdc_wfrbt-11-vne3e069.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fa9d96b295c71a8046986782df92fd5 nmdc:dobj-11-3y9wxr42 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vne3e069.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee0e42f3c3013512a38d3ac8f6ac815c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: 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path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cab593cada3a0d02f31d9f5ca3cf29cb nmdc:dobj-11-80xnd942 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-vne3e069.1/nmdc_wfrbt-11-vne3e069.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cab593cada3a0d02f31d9f5ca3cf29cb nmdc:dobj-11-2cpgxr96 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vne3e069.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd64b4244fd5526177002b86f841e31e -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8abd613779718c12c609379d66886d97 nmdc:dobj-11-9ts2g532 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-vne3e069.1/nmdc_wfrbt-11-vne3e069.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8abd613779718c12c609379d66886d97 nmdc:dobj-11-8v0fxg24 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vne3e069.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1441315d236b82b36e8a4c67e2969141 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path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:463e5e53fa4c0f645a814e39ba85c329 nmdc:dobj-11-63t3bw52 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-vne3e069.1/nmdc_wfrbt-11-vne3e069.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:463e5e53fa4c0f645a814e39ba85c329 nmdc:dobj-11-ve924077 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ed20a72457dcd6a3e1dce626d6ee0151 nmdc:wfrbt-11-jvf9vc33.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vne3e069.1_kraken2_krona.html 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfmgas-11-skwyhj13.1/nmdc_wfmgas-11-skwyhj13.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2241b87bfda9ceb529818473447288f nmdc:dobj-11-b41a6a54 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfmgas-11-7kbrcw21.1/nmdc_wfmgas-11-7kbrcw21.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2241b87bfda9ceb529818473447288f nmdc:dobj-11-9wg7mw90 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-skwyhj13.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kbrcw21.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:55ba5ffe4f656ec1259f19f10515f3ad -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfmgas-11-skwyhj13.1/nmdc_wfmgas-11-skwyhj13.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6a3dbe8001532a74a4085c9070d472f nmdc:dobj-11-77mq1c49 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfmgas-11-7kbrcw21.1/nmdc_wfmgas-11-7kbrcw21.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6a3dbe8001532a74a4085c9070d472f nmdc:dobj-11-rjg46a13 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-skwyhj13.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kbrcw21.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:adabe10644ac8372d0e744d87bff893e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfmgas-11-skwyhj13.1/nmdc_wfmgas-11-skwyhj13.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:adabe10644ac8372d0e744d87bff893e nmdc:dobj-11-a6rrjm35 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfmgas-11-7kbrcw21.1/nmdc_wfmgas-11-7kbrcw21.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:adabe10644ac8372d0e744d87bff893e nmdc:dobj-11-ajsvx137 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-skwyhj13.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kbrcw21.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24922b1bf381227856efb374b3b1b91a -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfmgas-11-skwyhj13.1/nmdc_wfmgas-11-skwyhj13.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24922b1bf381227856efb374b3b1b91a nmdc:dobj-11-fy62cg97 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfmgas-11-7kbrcw21.1/nmdc_wfmgas-11-7kbrcw21.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24922b1bf381227856efb374b3b1b91a nmdc:dobj-11-v2qpr351 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-skwyhj13.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:388875e2de566072575b3d41fb034e50 nmdc:wfmgas-11-skwyhj13.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kbrcw21.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:388875e2de566072575b3d41fb034e50 nmdc:wfmgas-11-7kbrcw21.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-176k6334 -INFO:root:New activity id created for nmdc:omprc-11-176k6334 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ntkfh697.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1 +INFO:root:New activity id created for nmdc:omprc-11-176k6334 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-wgrkex63.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae0cf9645216f4b684949ef778a2f82d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae0cf9645216f4b684949ef778a2f82d nmdc:dobj-11-vnq6ch16 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae0cf9645216f4b684949ef778a2f82d nmdc:dobj-11-khrcb918 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3ee040f811c7a64e1fbe391de379be3 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3ee040f811c7a64e1fbe391de379be3 nmdc:dobj-11-am37sz19 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3ee040f811c7a64e1fbe391de379be3 nmdc:dobj-11-155h3f10 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44f324c080104c4b837dfff2c618dd71 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44f324c080104c4b837dfff2c618dd71 nmdc:dobj-11-kfmemj78 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44f324c080104c4b837dfff2c618dd71 nmdc:dobj-11-8qmnez47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b067154c72ddb59c09db18ecc24a01f4 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b067154c72ddb59c09db18ecc24a01f4 nmdc:dobj-11-v88hc037 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b067154c72ddb59c09db18ecc24a01f4 nmdc:dobj-11-bz49gr54 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82a5192e01f389d0ec580bd9c6cd93dc -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82a5192e01f389d0ec580bd9c6cd93dc nmdc:dobj-11-gd7zq965 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82a5192e01f389d0ec580bd9c6cd93dc nmdc:dobj-11-dvqr2q81 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 nmdc:dobj-11-dnk73566 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 nmdc:dobj-11-6w0sry73 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b34fe8f176d00ad621e343cee280407 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b34fe8f176d00ad621e343cee280407 nmdc:dobj-11-h39qy816 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b34fe8f176d00ad621e343cee280407 nmdc:dobj-11-2ap3cx72 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b791766971652f65ffb1ac027441da43 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b791766971652f65ffb1ac027441da43 nmdc:dobj-11-gsghs789 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b791766971652f65ffb1ac027441da43 nmdc:dobj-11-w6d2ga37 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d4f5a4872fcf73915531b24326d777e6 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4f5a4872fcf73915531b24326d777e6 nmdc:dobj-11-8etwfj21 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-wgrkex63.1/nmdc_wfrbt-11-wgrkex63.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4f5a4872fcf73915531b24326d777e6 nmdc:dobj-11-deg7pf19 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:388875e2de566072575b3d41fb034e50 nmdc:wfrbt-11-ntkfh697.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wgrkex63.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:388875e2de566072575b3d41fb034e50 nmdc:wfrbt-11-wgrkex63.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-176k6334 INFO:root:omics_processing_id: nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59532226ec5755915a032e602dc04a03 nmdc:dobj-11-dfev2k16 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59532226ec5755915a032e602dc04a03 nmdc:dobj-11-fk5etn42 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ppm1kc56 -INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9jvvh615.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-9jvvh615.1 +INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-37eeae95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-37eeae95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5c0d39f4849b43bebf5ebfde7ad9abf -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-9jvvh615.1/nmdc_wfrqc-11-9jvvh615.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5c0d39f4849b43bebf5ebfde7ad9abf nmdc:dobj-11-v0tjgc86 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-37eeae95.1/nmdc_wfrqc-11-37eeae95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5c0d39f4849b43bebf5ebfde7ad9abf nmdc:dobj-11-n2rm9r24 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9jvvh615.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-37eeae95.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a73ea53daff026c7656d6c346678e6f2 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-9jvvh615.1/nmdc_wfrqc-11-9jvvh615.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a73ea53daff026c7656d6c346678e6f2 nmdc:dobj-11-qj6scz82 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-37eeae95.1/nmdc_wfrqc-11-37eeae95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a73ea53daff026c7656d6c346678e6f2 nmdc:dobj-11-330fk561 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9jvvh615.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfrqc-11-9jvvh615.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-37eeae95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfrqc-11-37eeae95.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ppm1kc56 -INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ncpa5r91.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1 +INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-zn0vqj60.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-zn0vqj60.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3df51a0a6d09862eeb7e32afa8d093ee -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3df51a0a6d09862eeb7e32afa8d093ee nmdc:dobj-11-a5nvq634 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-zn0vqj60.1/nmdc_wfmgas-11-zn0vqj60.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3df51a0a6d09862eeb7e32afa8d093ee nmdc:dobj-11-43tv9017 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zn0vqj60.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da28bc0afe95a4879ce8bee55f716bb2 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da28bc0afe95a4879ce8bee55f716bb2 nmdc:dobj-11-15nq4k85 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-zn0vqj60.1/nmdc_wfmgas-11-zn0vqj60.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da28bc0afe95a4879ce8bee55f716bb2 nmdc:dobj-11-20b8fv21 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zn0vqj60.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6e131d6d178a532582a0a7577c5fdf9a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e131d6d178a532582a0a7577c5fdf9a nmdc:dobj-11-7s1r5s54 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-zn0vqj60.1/nmdc_wfmgas-11-zn0vqj60.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e131d6d178a532582a0a7577c5fdf9a nmdc:dobj-11-khx7nf23 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zn0vqj60.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ad61e488202766a4970fe3ec0b7579e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ad61e488202766a4970fe3ec0b7579e nmdc:dobj-11-j7mave10 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-zn0vqj60.1/nmdc_wfmgas-11-zn0vqj60.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ad61e488202766a4970fe3ec0b7579e nmdc:dobj-11-dddptx26 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zn0vqj60.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e4e9b52a43b6885985efb30ee795b23 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e4e9b52a43b6885985efb30ee795b23 nmdc:dobj-11-3246qd84 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-zn0vqj60.1/nmdc_wfmgas-11-zn0vqj60.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e4e9b52a43b6885985efb30ee795b23 nmdc:dobj-11-xjjfpa34 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfmgas-11-ncpa5r91.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zn0vqj60.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2116369b3394b4d51977f00653798c91 nmdc:dobj-11-bb9hrp81 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2116369b3394b4d51977f00653798c91 nmdc:dobj-11-mbce3w65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79ea8eb051f7bf1a75a50ed608b09a6c -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79ea8eb051f7bf1a75a50ed608b09a6c nmdc:dobj-11-w6s0gh18 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79ea8eb051f7bf1a75a50ed608b09a6c nmdc:dobj-11-6k8mq208 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7351615ec85d3e089ab11e6a4b476808 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7351615ec85d3e089ab11e6a4b476808 nmdc:dobj-11-wr4rgx68 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7351615ec85d3e089ab11e6a4b476808 nmdc:dobj-11-3107wy66 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44ac21b09dea0484ded48c2644ab40d9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ac21b09dea0484ded48c2644ab40d9 nmdc:dobj-11-n1jwzt87 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ac21b09dea0484ded48c2644ab40d9 nmdc:dobj-11-8ykzmx05 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 nmdc:dobj-11-a0g8tw56 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 nmdc:dobj-11-g03n1350 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd9075271692c37b143498df3e047158 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd9075271692c37b143498df3e047158 nmdc:dobj-11-cs80rt98 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd9075271692c37b143498df3e047158 nmdc:dobj-11-bmb0a117 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bfeff910dd78b70e5d591232a8239f56 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfeff910dd78b70e5d591232a8239f56 nmdc:dobj-11-bt7twd22 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfeff910dd78b70e5d591232a8239f56 nmdc:dobj-11-h21myg64 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec244af617bdd43044a0636840ae0ed9 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec244af617bdd43044a0636840ae0ed9 nmdc:dobj-11-cq867e54 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec244af617bdd43044a0636840ae0ed9 nmdc:dobj-11-ayc17r39 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:483399641738a013f3e65c63b8a9e643 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:483399641738a013f3e65c63b8a9e643 nmdc:dobj-11-sgf69r26 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-c5bke520.1/nmdc_wfrbt-11-c5bke520.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:483399641738a013f3e65c63b8a9e643 nmdc:dobj-11-2k9g5n29 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfrbt-11-2fsy9d83.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-c5bke520.1_kraken2_krona.html 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nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfrqc-11-jcvdqk84.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wz36sx97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfrqc-11-wz36sx97.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gsx01g02 -INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3j4g4912.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1 +INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-nxxja302.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-nxxja302.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07718de6c41dec7b2122cc6bfa6437e0 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07718de6c41dec7b2122cc6bfa6437e0 nmdc:dobj-11-bh177531 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-nxxja302.1/nmdc_wfmgas-11-nxxja302.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07718de6c41dec7b2122cc6bfa6437e0 nmdc:dobj-11-qr57w714 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxxja302.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e587d98e7e01661b57c1a67084d2a84e -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec95c16ace60dd3c175ab95255e77d05 nmdc:dobj-11-yxyz7241 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-nxxja302.1/nmdc_wfmgas-11-nxxja302.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec95c16ace60dd3c175ab95255e77d05 nmdc:dobj-11-ctgk8s40 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxxja302.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:860417fb127246c5b1ffa38c0a3f3401 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:860417fb127246c5b1ffa38c0a3f3401 nmdc:dobj-11-mcb1hm03 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-nxxja302.1/nmdc_wfmgas-11-nxxja302.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:860417fb127246c5b1ffa38c0a3f3401 nmdc:dobj-11-501da996 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxxja302.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e6cdd777519107821142fa7be2735c2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e6cdd777519107821142fa7be2735c2 nmdc:dobj-11-z13tvt45 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-nxxja302.1/nmdc_wfmgas-11-nxxja302.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e6cdd777519107821142fa7be2735c2 nmdc:dobj-11-m0e6va96 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfmgas-11-3j4g4912.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxxja302.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfmgas-11-nxxja302.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gsx01g02 -INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8nb7v613.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1 +INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qzf0c112.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d6a6066ca1f7c854ce204fa52286b618 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6a6066ca1f7c854ce204fa52286b618 nmdc:dobj-11-t33kjy25 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6a6066ca1f7c854ce204fa52286b618 nmdc:dobj-11-phs59085 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bf74bc0f07ececef23e455da7229f7d2 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf74bc0f07ececef23e455da7229f7d2 nmdc:dobj-11-rccjp496 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf74bc0f07ececef23e455da7229f7d2 nmdc:dobj-11-eyjdt765 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebfe831bbab778e828dea284f6c2db17 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebfe831bbab778e828dea284f6c2db17 nmdc:dobj-11-s0jgva80 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebfe831bbab778e828dea284f6c2db17 nmdc:dobj-11-vsxpsc32 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:756f3c11ef403ba8f1a240932c5fa284 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:756f3c11ef403ba8f1a240932c5fa284 nmdc:dobj-11-rt7a7n28 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:756f3c11ef403ba8f1a240932c5fa284 nmdc:dobj-11-dh3gpp15 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a214e38f694df694b742558e0131f0c7 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a214e38f694df694b742558e0131f0c7 nmdc:dobj-11-9yebzx82 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a214e38f694df694b742558e0131f0c7 nmdc:dobj-11-y1g91540 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:989ad96a68d6a8210fd8e6feeffd4337 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:989ad96a68d6a8210fd8e6feeffd4337 nmdc:dobj-11-t5v33y79 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:989ad96a68d6a8210fd8e6feeffd4337 nmdc:dobj-11-ehchkb84 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7742daba0ff3d113ba8bb6b101acf491 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7742daba0ff3d113ba8bb6b101acf491 nmdc:dobj-11-mr1pcz75 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7742daba0ff3d113ba8bb6b101acf491 nmdc:dobj-11-hrjy5a26 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60270073bdb3dd9c3c5360fcf3b3c5c4 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60270073bdb3dd9c3c5360fcf3b3c5c4 nmdc:dobj-11-pydh8b38 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60270073bdb3dd9c3c5360fcf3b3c5c4 nmdc:dobj-11-r3xrya97 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c51a18ac682f7ee4feb2af515f611ba4 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c51a18ac682f7ee4feb2af515f611ba4 nmdc:dobj-11-enj9a783 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-qzf0c112.1/nmdc_wfrbt-11-qzf0c112.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c51a18ac682f7ee4feb2af515f611ba4 nmdc:dobj-11-x5npfn32 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfrbt-11-8nb7v613.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qzf0c112.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfrbt-11-qzf0c112.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gsx01g02 INFO:root:omics_processing_id: nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4779dacd0e7071f528be8c03fac547e7 nmdc:dobj-11-m68mq138 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4779dacd0e7071f528be8c03fac547e7 nmdc:dobj-11-vrk26t70 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-b9j4pk97 -INFO:root:New activity id created for nmdc:omprc-11-b9j4pk97 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zjttdj21.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrqc-11-zjttdj21.1 +INFO:root:New activity id created for nmdc:omprc-11-b9j4pk97 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qp9f4519.1 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b73e09e3e8bdc0890dca90c0a92a140 nmdc:dobj-11-eaj43n72 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-k8qy8x57.1/nmdc_wfmgas-11-k8qy8x57.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b73e09e3e8bdc0890dca90c0a92a140 nmdc:dobj-11-v62y7z67 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k8qy8x57.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46a01c1d28aac5bd419e33c63ad4a42e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46a01c1d28aac5bd419e33c63ad4a42e nmdc:dobj-11-p1ecmn48 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-k8qy8x57.1/nmdc_wfmgas-11-k8qy8x57.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46a01c1d28aac5bd419e33c63ad4a42e nmdc:dobj-11-fkqhg193 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k8qy8x57.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:056937db3bb74e6e62cf4adf5a8a52fa -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:056937db3bb74e6e62cf4adf5a8a52fa nmdc:dobj-11-na0fbm87 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-k8qy8x57.1/nmdc_wfmgas-11-k8qy8x57.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:056937db3bb74e6e62cf4adf5a8a52fa nmdc:dobj-11-212vpe74 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k8qy8x57.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8430e331eb8914436cc0473c95d1c3f5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8430e331eb8914436cc0473c95d1c3f5 nmdc:dobj-11-dbbmqa41 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-k8qy8x57.1/nmdc_wfmgas-11-k8qy8x57.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8430e331eb8914436cc0473c95d1c3f5 nmdc:dobj-11-3tvqak49 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k8qy8x57.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91fc24b40783287114877002c00d382a -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91fc24b40783287114877002c00d382a nmdc:dobj-11-sev1r928 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-k8qy8x57.1/nmdc_wfmgas-11-k8qy8x57.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91fc24b40783287114877002c00d382a nmdc:dobj-11-0agarn93 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:74b82dcdd4d848f43175639fdc0e06a0 nmdc:wfmgas-11-505htd56.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k8qy8x57.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23836128606562e0a2337fbca8b8f21d nmdc:dobj-11-pyym5791 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23836128606562e0a2337fbca8b8f21d nmdc:dobj-11-m8w7vn28 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d5fadb6a2a348506d17c489c516dd1f -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d5fadb6a2a348506d17c489c516dd1f nmdc:dobj-11-5vkcdg47 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d5fadb6a2a348506d17c489c516dd1f nmdc:dobj-11-2ndsfz89 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2cb788f136a41bb370ed607e380b1277 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cb788f136a41bb370ed607e380b1277 nmdc:dobj-11-17gx7n65 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cb788f136a41bb370ed607e380b1277 nmdc:dobj-11-p1w7gk64 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8a828420c66f32138f3151e12c93cf4 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8a828420c66f32138f3151e12c93cf4 nmdc:dobj-11-kkt89472 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8a828420c66f32138f3151e12c93cf4 nmdc:dobj-11-cb0x7034 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91c860160ee3a88b2230d5de3909feb3 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91c860160ee3a88b2230d5de3909feb3 nmdc:dobj-11-g4b1x292 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91c860160ee3a88b2230d5de3909feb3 nmdc:dobj-11-cvshw151 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b541e0ffe85bff612b7c3271a1625109 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b541e0ffe85bff612b7c3271a1625109 nmdc:dobj-11-ydxs7g41 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b541e0ffe85bff612b7c3271a1625109 nmdc:dobj-11-npk1sh84 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c462c007af3a4df4a37f416712c0f93 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c462c007af3a4df4a37f416712c0f93 nmdc:dobj-11-qsfbmf50 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c462c007af3a4df4a37f416712c0f93 nmdc:dobj-11-e6ze3938 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5b303204f5abfcef0764cb9a9fe6960 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5b303204f5abfcef0764cb9a9fe6960 nmdc:dobj-11-gm58bb47 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5b303204f5abfcef0764cb9a9fe6960 nmdc:dobj-11-habvfh84 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f21b0efef9933cd29d7e8c8c80713a17 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f21b0efef9933cd29d7e8c8c80713a17 nmdc:dobj-11-yq55ng73 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-pthm3741.1/nmdc_wfrbt-11-pthm3741.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f21b0efef9933cd29d7e8c8c80713a17 nmdc:dobj-11-29he7739 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:74b82dcdd4d848f43175639fdc0e06a0 nmdc:wfrbt-11-7jmvfe84.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pthm3741.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:74b82dcdd4d848f43175639fdc0e06a0 nmdc:wfrbt-11-pthm3741.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-b9j4pk97 INFO:root:omics_processing_id: nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:908fe1703358c811ae7bf408886a6e87 nmdc:dobj-11-7r3f1r85 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:908fe1703358c811ae7bf408886a6e87 nmdc:dobj-11-e7d85146 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-38h78d16 -INFO:root:New activity id created for nmdc:omprc-11-38h78d16 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0nhh4h68.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrqc-11-0nhh4h68.1 +INFO:root:New activity id created for nmdc:omprc-11-38h78d16 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-53545283.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrqc-11-53545283.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ca8d24dea85bb47eb3982e32898257ce -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrqc-11-0nhh4h68.1/nmdc_wfrqc-11-0nhh4h68.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca8d24dea85bb47eb3982e32898257ce nmdc:dobj-11-2n3jh002 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrqc-11-53545283.1/nmdc_wfrqc-11-53545283.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca8d24dea85bb47eb3982e32898257ce nmdc:dobj-11-7nw8gz95 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0nhh4h68.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-53545283.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:400551f61fad6febea1245f3696f84c9 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrqc-11-0nhh4h68.1/nmdc_wfrqc-11-0nhh4h68.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:400551f61fad6febea1245f3696f84c9 nmdc:dobj-11-2t0f3p59 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrqc-11-53545283.1/nmdc_wfrqc-11-53545283.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:400551f61fad6febea1245f3696f84c9 nmdc:dobj-11-3zzdnf72 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0nhh4h68.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d90f8be8edd7379e27608511f42cce4f nmdc:wfrqc-11-0nhh4h68.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-53545283.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d90f8be8edd7379e27608511f42cce4f nmdc:wfrqc-11-53545283.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-38h78d16 -INFO:root:New activity id created for nmdc:omprc-11-38h78d16 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-fx3h3666.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-fx3h3666.1 +INFO:root:New activity id created for nmdc:omprc-11-38h78d16 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7m7bax45.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-7m7bax45.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8e0351dd3d3290b94332377fd992ee9 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-fx3h3666.1/nmdc_wfmgas-11-fx3h3666.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8e0351dd3d3290b94332377fd992ee9 nmdc:dobj-11-znrw5a36 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-7m7bax45.1/nmdc_wfmgas-11-7m7bax45.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8e0351dd3d3290b94332377fd992ee9 nmdc:dobj-11-kn14m327 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fx3h3666.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7m7bax45.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:082e91c0f9dbfb8be4545a068b856fc2 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-fx3h3666.1/nmdc_wfmgas-11-fx3h3666.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:082e91c0f9dbfb8be4545a068b856fc2 nmdc:dobj-11-mc7rmz08 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-7m7bax45.1/nmdc_wfmgas-11-7m7bax45.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:082e91c0f9dbfb8be4545a068b856fc2 nmdc:dobj-11-ezsq0v77 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fx3h3666.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7m7bax45.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:885c30dd862ef3fc4926973fb4b01c8b -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-fx3h3666.1/nmdc_wfmgas-11-fx3h3666.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:885c30dd862ef3fc4926973fb4b01c8b nmdc:dobj-11-1aafmr19 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-7m7bax45.1/nmdc_wfmgas-11-7m7bax45.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:885c30dd862ef3fc4926973fb4b01c8b nmdc:dobj-11-shtjt105 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fx3h3666.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7m7bax45.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:452a9abe77f69bdf383fd43c1172a40e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-fx3h3666.1/nmdc_wfmgas-11-fx3h3666.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:452a9abe77f69bdf383fd43c1172a40e nmdc:dobj-11-rrqhm355 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-7m7bax45.1/nmdc_wfmgas-11-7m7bax45.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:452a9abe77f69bdf383fd43c1172a40e nmdc:dobj-11-f8yea279 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fx3h3666.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7m7bax45.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e866c0e7b0eb54535e4476dfdad24b7c -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-fx3h3666.1/nmdc_wfmgas-11-fx3h3666.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e866c0e7b0eb54535e4476dfdad24b7c nmdc:dobj-11-xzzcga12 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfmgas-11-7m7bax45.1/nmdc_wfmgas-11-7m7bax45.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e866c0e7b0eb54535e4476dfdad24b7c nmdc:dobj-11-1v8p3h27 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fx3h3666.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d90f8be8edd7379e27608511f42cce4f nmdc:wfmgas-11-fx3h3666.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7m7bax45.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d90f8be8edd7379e27608511f42cce4f nmdc:wfmgas-11-7m7bax45.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-38h78d16 -INFO:root:New activity id created for nmdc:omprc-11-38h78d16 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2cxrjg64.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1 +INFO:root:New activity id created for nmdc:omprc-11-38h78d16 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kjygp781.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd8c8bc59a700e644e19295f4613f8a5 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd8c8bc59a700e644e19295f4613f8a5 nmdc:dobj-11-7wn85x71 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd8c8bc59a700e644e19295f4613f8a5 nmdc:dobj-11-9bq5da78 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db917434e3a8a394c929713367b6d60f -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db917434e3a8a394c929713367b6d60f nmdc:dobj-11-tqck0029 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db917434e3a8a394c929713367b6d60f nmdc:dobj-11-0fj9w146 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fce7444c99f2d8006c798d798d4af9f8 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fce7444c99f2d8006c798d798d4af9f8 nmdc:dobj-11-01fjbj65 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fce7444c99f2d8006c798d798d4af9f8 nmdc:dobj-11-m5s36h74 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e34462c20683f3942a0b44e14b86f099 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e34462c20683f3942a0b44e14b86f099 nmdc:dobj-11-syrtzn58 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e34462c20683f3942a0b44e14b86f099 nmdc:dobj-11-73m2xt17 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:878f1d1e4df4322d2832395aa2a0e8d3 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:878f1d1e4df4322d2832395aa2a0e8d3 nmdc:dobj-11-p1rreq87 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:878f1d1e4df4322d2832395aa2a0e8d3 nmdc:dobj-11-61r3w275 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:773664b28b1c88402c02db092f267be7 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:773664b28b1c88402c02db092f267be7 nmdc:dobj-11-knnhrg33 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:773664b28b1c88402c02db092f267be7 nmdc:dobj-11-r8j9c012 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:835ffe62701fda30cbe2d7fa548f2388 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:835ffe62701fda30cbe2d7fa548f2388 nmdc:dobj-11-98jejg40 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:835ffe62701fda30cbe2d7fa548f2388 nmdc:dobj-11-xeyr5q16 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be61a2806915bce88f8d0c1f74e69e28 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be61a2806915bce88f8d0c1f74e69e28 nmdc:dobj-11-3rtn9h69 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be61a2806915bce88f8d0c1f74e69e28 nmdc:dobj-11-47ytvg02 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7b2169beb649e04645f638a1e2cb17b -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7b2169beb649e04645f638a1e2cb17b nmdc:dobj-11-3mgm6781 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-kjygp781.1/nmdc_wfrbt-11-kjygp781.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7b2169beb649e04645f638a1e2cb17b nmdc:dobj-11-g3737815 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d90f8be8edd7379e27608511f42cce4f nmdc:wfrbt-11-2cxrjg64.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kjygp781.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d90f8be8edd7379e27608511f42cce4f nmdc:wfrbt-11-kjygp781.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-38h78d16 INFO:root:omics_processing_id: nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb1897fb6c87bcf5b25c76e0ac149b67 nmdc:dobj-11-qwf3dc33 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb1897fb6c87bcf5b25c76e0ac149b67 nmdc:dobj-11-ywy40m07 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ytakgm41 -INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cv8h0m18.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-cv8h0m18.1 +INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-53k6yc25.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-53k6yc25.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:00247c55ac3cea98fd1e3594774cd370 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-cv8h0m18.1/nmdc_wfrqc-11-cv8h0m18.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00247c55ac3cea98fd1e3594774cd370 nmdc:dobj-11-0t7zkg98 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-53k6yc25.1/nmdc_wfrqc-11-53k6yc25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00247c55ac3cea98fd1e3594774cd370 nmdc:dobj-11-5h7p2j76 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cv8h0m18.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfrqc-11-cv8h0m18.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-53k6yc25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfrqc-11-53k6yc25.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ytakgm41 -INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x8qffp53.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1 +INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2ebr4p91.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-2ebr4p91.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0d7c3cfa223d081f55f047390a81b450 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d7c3cfa223d081f55f047390a81b450 nmdc:dobj-11-0memhn21 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-2ebr4p91.1/nmdc_wfmgas-11-2ebr4p91.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d7c3cfa223d081f55f047390a81b450 nmdc:dobj-11-s6ywvh13 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ebr4p91.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b07be82e2b87dc824fc32f48f1b9376 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b07be82e2b87dc824fc32f48f1b9376 nmdc:dobj-11-atvn2j22 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-2ebr4p91.1/nmdc_wfmgas-11-2ebr4p91.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b07be82e2b87dc824fc32f48f1b9376 nmdc:dobj-11-x3j4pt98 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ebr4p91.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d94c3d4aced63619e6d7ce617f60ede0 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94c3d4aced63619e6d7ce617f60ede0 nmdc:dobj-11-tcdpvk56 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-2ebr4p91.1/nmdc_wfmgas-11-2ebr4p91.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94c3d4aced63619e6d7ce617f60ede0 nmdc:dobj-11-0b2m2w81 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ebr4p91.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77b1c42efa2b0e793eb3c90a09a53a27 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77b1c42efa2b0e793eb3c90a09a53a27 nmdc:dobj-11-789dw926 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-2ebr4p91.1/nmdc_wfmgas-11-2ebr4p91.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77b1c42efa2b0e793eb3c90a09a53a27 nmdc:dobj-11-ytd7dm10 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ebr4p91.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9db3f494f3373d5893a1fde528a08f1b -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9db3f494f3373d5893a1fde528a08f1b nmdc:dobj-11-nkfdn547 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-2ebr4p91.1/nmdc_wfmgas-11-2ebr4p91.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9db3f494f3373d5893a1fde528a08f1b nmdc:dobj-11-khtbxp73 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfmgas-11-x8qffp53.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2ebr4p91.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfmgas-11-2ebr4p91.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ytakgm41 -INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-bw9tqr56.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1 +INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-v8hz0765.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92d6845b03d1c9e06c77d247fd7a59c3 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92d6845b03d1c9e06c77d247fd7a59c3 nmdc:dobj-11-day3eg29 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92d6845b03d1c9e06c77d247fd7a59c3 nmdc:dobj-11-tdaqpy64 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:075f37069b66a9e1354572fc64b64d78 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:075f37069b66a9e1354572fc64b64d78 nmdc:dobj-11-nh738b76 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:075f37069b66a9e1354572fc64b64d78 nmdc:dobj-11-q3w9zv89 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5e7cce38a745ddb3733e9070f291f30 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5e7cce38a745ddb3733e9070f291f30 nmdc:dobj-11-264nv917 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5e7cce38a745ddb3733e9070f291f30 nmdc:dobj-11-887ydw08 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:08cc61d8fede0602cf5b4e0c902e9697 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08cc61d8fede0602cf5b4e0c902e9697 nmdc:dobj-11-j9h8g458 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08cc61d8fede0602cf5b4e0c902e9697 nmdc:dobj-11-4vdn9k89 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d8efa2984296797b98d31258db2c1e9 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d8efa2984296797b98d31258db2c1e9 nmdc:dobj-11-m2g6vy11 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d8efa2984296797b98d31258db2c1e9 nmdc:dobj-11-hgqmqa41 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea876b541cf655002daba6a3b6f19ae4 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea876b541cf655002daba6a3b6f19ae4 nmdc:dobj-11-3p1z1j34 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea876b541cf655002daba6a3b6f19ae4 nmdc:dobj-11-net65603 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac37e5f91352b5d004b6499f1c933e81 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac37e5f91352b5d004b6499f1c933e81 nmdc:dobj-11-vjcp9n70 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac37e5f91352b5d004b6499f1c933e81 nmdc:dobj-11-7j1fyp23 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e91e296312f9b97c3e43d9ec437662db -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e91e296312f9b97c3e43d9ec437662db nmdc:dobj-11-e074ep54 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e91e296312f9b97c3e43d9ec437662db nmdc:dobj-11-h9nyqk61 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0008e32dd1b90922c3335ea7e050f9e7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0008e32dd1b90922c3335ea7e050f9e7 nmdc:dobj-11-6e2wb509 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-v8hz0765.1/nmdc_wfrbt-11-v8hz0765.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0008e32dd1b90922c3335ea7e050f9e7 nmdc:dobj-11-dw1k8536 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfrbt-11-bw9tqr56.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v8hz0765.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfrbt-11-v8hz0765.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ytakgm41 INFO:root:omics_processing_id: nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da44ab401932bc11c5c7e2ec4f50d945 nmdc:dobj-11-92f97y64 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da44ab401932bc11c5c7e2ec4f50d945 nmdc:dobj-11-472kka22 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gbv7zh09 -INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vyxe2087.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-vyxe2087.1 +INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-jnp7hn30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-jnp7hn30.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be4348289be81f991af1486ad6e5dd51 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-vyxe2087.1/nmdc_wfrqc-11-vyxe2087.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4348289be81f991af1486ad6e5dd51 nmdc:dobj-11-r17gtg25 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-jnp7hn30.1/nmdc_wfrqc-11-jnp7hn30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4348289be81f991af1486ad6e5dd51 nmdc:dobj-11-32jwdc82 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vyxe2087.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jnp7hn30.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-vyxe2087.1/nmdc_wfrqc-11-vyxe2087.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 nmdc:dobj-11-zvhg1c29 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-jnp7hn30.1/nmdc_wfrqc-11-jnp7hn30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 nmdc:dobj-11-qk802231 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vyxe2087.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfrqc-11-vyxe2087.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jnp7hn30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfrqc-11-jnp7hn30.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gbv7zh09 -INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0ea72515.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1 +INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ac1ack77.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-ac1ack77.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0208512cc7a3301b279641703c2a1504 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0208512cc7a3301b279641703c2a1504 nmdc:dobj-11-k4qnxy53 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-ac1ack77.1/nmdc_wfmgas-11-ac1ack77.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0208512cc7a3301b279641703c2a1504 nmdc:dobj-11-er1j3j38 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ac1ack77.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23f5a0946351e2f19e3645314176dd67 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23f5a0946351e2f19e3645314176dd67 nmdc:dobj-11-scb7qb64 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-ac1ack77.1/nmdc_wfmgas-11-ac1ack77.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23f5a0946351e2f19e3645314176dd67 nmdc:dobj-11-zwdspw56 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ac1ack77.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89e1e1cc7625f9fa924fd4056dbf37e2 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89e1e1cc7625f9fa924fd4056dbf37e2 nmdc:dobj-11-02b6bb50 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-ac1ack77.1/nmdc_wfmgas-11-ac1ack77.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89e1e1cc7625f9fa924fd4056dbf37e2 nmdc:dobj-11-c3mner64 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ac1ack77.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a nmdc:dobj-11-239f9352 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-ac1ack77.1/nmdc_wfmgas-11-ac1ack77.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a nmdc:dobj-11-htcmke27 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ac1ack77.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ac6a3066bd295bbee2cc8a822c3ebe8 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ac6a3066bd295bbee2cc8a822c3ebe8 nmdc:dobj-11-sre2xr11 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-ac1ack77.1/nmdc_wfmgas-11-ac1ack77.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ac6a3066bd295bbee2cc8a822c3ebe8 nmdc:dobj-11-57j9hy25 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfmgas-11-0ea72515.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ac1ack77.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfmgas-11-ac1ack77.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gbv7zh09 -INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1emp3s12.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1 +INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-49x2y068.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d33a4811210762b1928c5c17f376c3f -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d33a4811210762b1928c5c17f376c3f nmdc:dobj-11-pf8mrc50 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d33a4811210762b1928c5c17f376c3f nmdc:dobj-11-epbrw206 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2565349a1e98abb96b8da88ee108b55 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2565349a1e98abb96b8da88ee108b55 nmdc:dobj-11-wfzp9m92 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2565349a1e98abb96b8da88ee108b55 nmdc:dobj-11-drbdq680 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:705c914a44264725bd5ad30e74a4919a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:705c914a44264725bd5ad30e74a4919a nmdc:dobj-11-8xhs8r17 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:705c914a44264725bd5ad30e74a4919a nmdc:dobj-11-2rma0690 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09e02f5247faaa726b561cf782922340 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e02f5247faaa726b561cf782922340 nmdc:dobj-11-5a24gq34 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e02f5247faaa726b561cf782922340 nmdc:dobj-11-b0hzsj08 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:707e4377811aca0e7d02133092a89edd -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:707e4377811aca0e7d02133092a89edd nmdc:dobj-11-2j3djj37 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:707e4377811aca0e7d02133092a89edd nmdc:dobj-11-sw6zvm57 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b9148a049a0e97bea5e85c37de00d674 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9148a049a0e97bea5e85c37de00d674 nmdc:dobj-11-6rtq0r24 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9148a049a0e97bea5e85c37de00d674 nmdc:dobj-11-7119na67 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4266fbced36d9ee69e63c4eaacd28665 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4266fbced36d9ee69e63c4eaacd28665 nmdc:dobj-11-wnmt5641 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4266fbced36d9ee69e63c4eaacd28665 nmdc:dobj-11-q16v6d15 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:341eb58042a151931224a0839280c7dc -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:341eb58042a151931224a0839280c7dc nmdc:dobj-11-2603wy36 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:341eb58042a151931224a0839280c7dc nmdc:dobj-11-a0ae1j26 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f331f13976704fc41572eed8e6cc2d0 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f331f13976704fc41572eed8e6cc2d0 nmdc:dobj-11-bjfed432 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-49x2y068.1/nmdc_wfrbt-11-49x2y068.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f331f13976704fc41572eed8e6cc2d0 nmdc:dobj-11-q29wn148 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfrbt-11-1emp3s12.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-49x2y068.1_kraken2_krona.html 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:521fe79e687e03eefe255088d4e58b27 nmdc:dobj-11-7we95103 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-mhwk0965.1/nmdc_wfrbt-11-mhwk0965.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:521fe79e687e03eefe255088d4e58b27 nmdc:dobj-11-s69j4721 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mhwk0965.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42a99767c538f2d4211f14a253c91aa4 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42a99767c538f2d4211f14a253c91aa4 nmdc:dobj-11-te1vnk11 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-mhwk0965.1/nmdc_wfrbt-11-mhwk0965.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42a99767c538f2d4211f14a253c91aa4 nmdc:dobj-11-0pce9c92 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mhwk0965.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1cd68fe37b48de6f8f542a71a550a796 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1cd68fe37b48de6f8f542a71a550a796 nmdc:dobj-11-b1017z92 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-mhwk0965.1/nmdc_wfrbt-11-mhwk0965.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1cd68fe37b48de6f8f542a71a550a796 nmdc:dobj-11-8hsehq34 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mhwk0965.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb71ec27a8d6d5881c7d31091faf9501 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb71ec27a8d6d5881c7d31091faf9501 nmdc:dobj-11-tagc0255 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-mhwk0965.1/nmdc_wfrbt-11-mhwk0965.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb71ec27a8d6d5881c7d31091faf9501 nmdc:dobj-11-0650qe47 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mhwk0965.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5089c93436a2d4968b97357391f7e8b8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5089c93436a2d4968b97357391f7e8b8 nmdc:dobj-11-rbwc4f56 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-mhwk0965.1/nmdc_wfrbt-11-mhwk0965.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5089c93436a2d4968b97357391f7e8b8 nmdc:dobj-11-9gmcjf40 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mhwk0965.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:70777cd32a3f9cc0e00841da144f1cf8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:70777cd32a3f9cc0e00841da144f1cf8 nmdc:dobj-11-ck157t68 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-mhwk0965.1/nmdc_wfrbt-11-mhwk0965.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:70777cd32a3f9cc0e00841da144f1cf8 nmdc:dobj-11-wyr4re65 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:55a79b5dd58771e28686665e3c3faa0c nmdc:wfrbt-11-ejgk4c37.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mhwk0965.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:55a79b5dd58771e28686665e3c3faa0c nmdc:wfrbt-11-mhwk0965.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-4rwmp312 INFO:root:omics_processing_id: nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12b43da62aae4332869c589de5853062 nmdc:dobj-11-1hx73621 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12b43da62aae4332869c589de5853062 nmdc:dobj-11-rtebt035 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-t6acv418 -INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-pjayxf32.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrqc-11-pjayxf32.1 +INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gaae9235.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrqc-11-gaae9235.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5f021fe306870603c6a2c5361b74ec4 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrqc-11-pjayxf32.1/nmdc_wfrqc-11-pjayxf32.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5f021fe306870603c6a2c5361b74ec4 nmdc:dobj-11-pjardf18 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrqc-11-gaae9235.1/nmdc_wfrqc-11-gaae9235.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5f021fe306870603c6a2c5361b74ec4 nmdc:dobj-11-yvkakm30 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pjayxf32.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gaae9235.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0724fb909f8360b900443623dbcf83d7 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrqc-11-pjayxf32.1/nmdc_wfrqc-11-pjayxf32.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0724fb909f8360b900443623dbcf83d7 nmdc:dobj-11-npnxh452 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrqc-11-gaae9235.1/nmdc_wfrqc-11-gaae9235.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0724fb909f8360b900443623dbcf83d7 nmdc:dobj-11-qz9rpz85 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pjayxf32.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfrqc-11-pjayxf32.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gaae9235.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfrqc-11-gaae9235.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-t6acv418 -INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vy9z4k78.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1 +INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ej31fw80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-ej31fw80.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fec8d61f70b5c0b14993d3f29a1274e -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fec8d61f70b5c0b14993d3f29a1274e nmdc:dobj-11-1zh56x58 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-ej31fw80.1/nmdc_wfmgas-11-ej31fw80.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fec8d61f70b5c0b14993d3f29a1274e nmdc:dobj-11-aw99xd30 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ej31fw80.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:309988684d9da7eb4b2773943f1f9085 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:309988684d9da7eb4b2773943f1f9085 nmdc:dobj-11-f1et9118 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-ej31fw80.1/nmdc_wfmgas-11-ej31fw80.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:309988684d9da7eb4b2773943f1f9085 nmdc:dobj-11-4ymsbv34 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ej31fw80.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7658c6216a5bb8954ba11e9ac1d8d498 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7658c6216a5bb8954ba11e9ac1d8d498 nmdc:dobj-11-dp6maa45 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-ej31fw80.1/nmdc_wfmgas-11-ej31fw80.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7658c6216a5bb8954ba11e9ac1d8d498 nmdc:dobj-11-j81wbv69 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ej31fw80.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:81010adabdfe6803e88d304331157710 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81010adabdfe6803e88d304331157710 nmdc:dobj-11-2rdhrj21 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-ej31fw80.1/nmdc_wfmgas-11-ej31fw80.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81010adabdfe6803e88d304331157710 nmdc:dobj-11-2pqcar17 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ej31fw80.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48a79f97b3b00d3656d52e1cdcf63704 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48a79f97b3b00d3656d52e1cdcf63704 nmdc:dobj-11-qzjm4518 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-ej31fw80.1/nmdc_wfmgas-11-ej31fw80.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48a79f97b3b00d3656d52e1cdcf63704 nmdc:dobj-11-ycmd4t29 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfmgas-11-vy9z4k78.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ej31fw80.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfmgas-11-ej31fw80.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-t6acv418 -INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gybstb71.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1 +INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-pn2j7f13.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9d4512c07a7e449a5a554c7f59163331 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d4512c07a7e449a5a554c7f59163331 nmdc:dobj-11-rczjds80 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d4512c07a7e449a5a554c7f59163331 nmdc:dobj-11-nc7hv278 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c512607f7735e7101654a1b08665eef -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c512607f7735e7101654a1b08665eef nmdc:dobj-11-0pvjkk49 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c512607f7735e7101654a1b08665eef nmdc:dobj-11-amazvy06 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50a28b128e4f5f462b1cd0af666da6b5 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50a28b128e4f5f462b1cd0af666da6b5 nmdc:dobj-11-f0afr941 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50a28b128e4f5f462b1cd0af666da6b5 nmdc:dobj-11-qtn4ec38 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eed53b443c40b88bdc3dd73da18d01ab -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eed53b443c40b88bdc3dd73da18d01ab nmdc:dobj-11-6st38h74 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eed53b443c40b88bdc3dd73da18d01ab nmdc:dobj-11-gq9g9s33 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 nmdc:dobj-11-fmpfht77 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 nmdc:dobj-11-qera0824 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe1dc4c852803fdf077c2f8c139bb27e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe1dc4c852803fdf077c2f8c139bb27e nmdc:dobj-11-92s2d282 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe1dc4c852803fdf077c2f8c139bb27e nmdc:dobj-11-9xwgg118 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1599cb0082b1fe131190910d097a469 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1599cb0082b1fe131190910d097a469 nmdc:dobj-11-r3dgpa36 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1599cb0082b1fe131190910d097a469 nmdc:dobj-11-4av83w23 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 nmdc:dobj-11-a70ryx64 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 nmdc:dobj-11-6s5shf47 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7261968652b1d553c1be543b120b27e -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7261968652b1d553c1be543b120b27e nmdc:dobj-11-4qrfye17 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-pn2j7f13.1/nmdc_wfrbt-11-pn2j7f13.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7261968652b1d553c1be543b120b27e nmdc:dobj-11-2jew7184 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfrbt-11-gybstb71.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pn2j7f13.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfrbt-11-pn2j7f13.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-t6acv418 INFO:root:omics_processing_id: nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:722f2dbb28d08d2f65cacea4c5435da2 nmdc:dobj-11-dey3bq30 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:722f2dbb28d08d2f65cacea4c5435da2 nmdc:dobj-11-6phmjb20 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-pwwc3q04 -INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xxa6a783.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-xxa6a783.1 +INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5g8s3881.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-5g8s3881.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1bde0a8a9a5532b4d2565f468158fb7b -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-xxa6a783.1/nmdc_wfrqc-11-xxa6a783.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bde0a8a9a5532b4d2565f468158fb7b nmdc:dobj-11-g7mrr582 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-5g8s3881.1/nmdc_wfrqc-11-5g8s3881.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bde0a8a9a5532b4d2565f468158fb7b nmdc:dobj-11-h1wyp445 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xxa6a783.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5g8s3881.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9d0da0c395e1006577ace130471186fd -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-xxa6a783.1/nmdc_wfrqc-11-xxa6a783.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d0da0c395e1006577ace130471186fd nmdc:dobj-11-ceg6zf87 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-5g8s3881.1/nmdc_wfrqc-11-5g8s3881.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d0da0c395e1006577ace130471186fd nmdc:dobj-11-35259g61 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xxa6a783.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfrqc-11-xxa6a783.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5g8s3881.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfrqc-11-5g8s3881.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-pwwc3q04 -INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hj93a371.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1 +INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3e6xzx90.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-3e6xzx90.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3953f6dace895eb7ce802eea576fbbde -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3953f6dace895eb7ce802eea576fbbde nmdc:dobj-11-cdw0av19 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-3e6xzx90.1/nmdc_wfmgas-11-3e6xzx90.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3953f6dace895eb7ce802eea576fbbde nmdc:dobj-11-wsswar60 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e6xzx90.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ef7c2514f6682e3b004f9cb541f6e72 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ef7c2514f6682e3b004f9cb541f6e72 nmdc:dobj-11-ennw6m34 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-3e6xzx90.1/nmdc_wfmgas-11-3e6xzx90.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ef7c2514f6682e3b004f9cb541f6e72 nmdc:dobj-11-9p7edn47 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e6xzx90.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 nmdc:dobj-11-ftw0ax88 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-3e6xzx90.1/nmdc_wfmgas-11-3e6xzx90.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 nmdc:dobj-11-h0303h23 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e6xzx90.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3d8ae36d4aab87700ef3abc3268f909 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3d8ae36d4aab87700ef3abc3268f909 nmdc:dobj-11-mc6xrq45 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-3e6xzx90.1/nmdc_wfmgas-11-3e6xzx90.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3d8ae36d4aab87700ef3abc3268f909 nmdc:dobj-11-w1pfy879 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e6xzx90.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1290fa0f1f45c1e7cddb8462b21ade6f -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1290fa0f1f45c1e7cddb8462b21ade6f nmdc:dobj-11-34gb7588 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-3e6xzx90.1/nmdc_wfmgas-11-3e6xzx90.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1290fa0f1f45c1e7cddb8462b21ade6f nmdc:dobj-11-eje1cs98 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfmgas-11-hj93a371.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e6xzx90.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfmgas-11-3e6xzx90.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-pwwc3q04 -INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-42fbj781.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1 +INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gb9tph24.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bec77a51b6d2bea22a87806d8312308 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bec77a51b6d2bea22a87806d8312308 nmdc:dobj-11-g22vvd51 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bec77a51b6d2bea22a87806d8312308 nmdc:dobj-11-p33nqq91 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8319bbc7c65d0031cd161cb55c28569 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8319bbc7c65d0031cd161cb55c28569 nmdc:dobj-11-f5cs9j46 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8319bbc7c65d0031cd161cb55c28569 nmdc:dobj-11-3tytev93 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43d29eef149bc475f58a33d4d39b3870 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43d29eef149bc475f58a33d4d39b3870 nmdc:dobj-11-zhepes19 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43d29eef149bc475f58a33d4d39b3870 nmdc:dobj-11-krynhw65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d361583c803e94e6ebd9c91bf184107c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d361583c803e94e6ebd9c91bf184107c nmdc:dobj-11-1m6wa198 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d361583c803e94e6ebd9c91bf184107c nmdc:dobj-11-p6kwzy45 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ab53810aec7d030b99f666cb6cb8599 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ab53810aec7d030b99f666cb6cb8599 nmdc:dobj-11-vzb4wy71 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ab53810aec7d030b99f666cb6cb8599 nmdc:dobj-11-cytjw086 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:821e594f40527f78cc9ba890eff6810a -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:821e594f40527f78cc9ba890eff6810a nmdc:dobj-11-gfd8pp62 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:821e594f40527f78cc9ba890eff6810a nmdc:dobj-11-t53ddz80 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7912c0b2e56700f6f465b0570c08325e -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7912c0b2e56700f6f465b0570c08325e nmdc:dobj-11-3ctaj963 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7912c0b2e56700f6f465b0570c08325e nmdc:dobj-11-9fq9jd33 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a nmdc:dobj-11-zwgkyc82 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a nmdc:dobj-11-z6p1z651 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e738ee2e3aa9d0dcb33b765880763505 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e738ee2e3aa9d0dcb33b765880763505 nmdc:dobj-11-h787b547 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-gb9tph24.1/nmdc_wfrbt-11-gb9tph24.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e738ee2e3aa9d0dcb33b765880763505 nmdc:dobj-11-g4e2eb50 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfrbt-11-42fbj781.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gb9tph24.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfrbt-11-gb9tph24.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-pwwc3q04 INFO:root:omics_processing_id: nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d9b361423c5819782294a8789859b9b nmdc:dobj-11-jv257f47 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d9b361423c5819782294a8789859b9b nmdc:dobj-11-k98bhn12 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-g9t2xf29 -INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rpmwzq38.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-rpmwzq38.1 +INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-p4zhwx86.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-p4zhwx86.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:408ae81c9ee616178cb0c87195316403 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-rpmwzq38.1/nmdc_wfrqc-11-rpmwzq38.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:408ae81c9ee616178cb0c87195316403 nmdc:dobj-11-07n05w57 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-p4zhwx86.1/nmdc_wfrqc-11-p4zhwx86.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:408ae81c9ee616178cb0c87195316403 nmdc:dobj-11-4f8at145 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rpmwzq38.1_filtered.fastq.gz 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nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfrqc-11-rpmwzq38.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p4zhwx86.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfrqc-11-p4zhwx86.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-g9t2xf29 -INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vnbffr26.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1 +INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0qan4c88.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-0qan4c88.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:732e1036130617f691e05c2e88cdb7ca -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:732e1036130617f691e05c2e88cdb7ca nmdc:dobj-11-9fh8t403 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-0qan4c88.1/nmdc_wfmgas-11-0qan4c88.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:732e1036130617f691e05c2e88cdb7ca nmdc:dobj-11-etxaj551 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0qan4c88.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61321e6aa841ecf52cfcc1ebcdf9bb5a -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61321e6aa841ecf52cfcc1ebcdf9bb5a nmdc:dobj-11-58s1ae73 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-0qan4c88.1/nmdc_wfmgas-11-0qan4c88.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61321e6aa841ecf52cfcc1ebcdf9bb5a nmdc:dobj-11-k9qgyh37 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0qan4c88.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ca2df80fed289a8b8157a0e28f8078c -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ca2df80fed289a8b8157a0e28f8078c nmdc:dobj-11-5jbkja24 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-0qan4c88.1/nmdc_wfmgas-11-0qan4c88.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ca2df80fed289a8b8157a0e28f8078c nmdc:dobj-11-48b39871 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0qan4c88.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2055a22c0e446c599107da987bf71f53 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2055a22c0e446c599107da987bf71f53 nmdc:dobj-11-h3k87465 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-0qan4c88.1/nmdc_wfmgas-11-0qan4c88.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2055a22c0e446c599107da987bf71f53 nmdc:dobj-11-r2ts9q22 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0qan4c88.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b48f26208908b023264455703accf2e8 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b48f26208908b023264455703accf2e8 nmdc:dobj-11-2tbm3976 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-0qan4c88.1/nmdc_wfmgas-11-0qan4c88.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b48f26208908b023264455703accf2e8 nmdc:dobj-11-adrakx17 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfmgas-11-vnbffr26.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0qan4c88.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfmgas-11-0qan4c88.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-g9t2xf29 -INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-wvsksd75.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1 +INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-mczfpv60.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09bfc13dc9a390c3ee97e13baa5f7adf -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09bfc13dc9a390c3ee97e13baa5f7adf nmdc:dobj-11-68f2fj49 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09bfc13dc9a390c3ee97e13baa5f7adf nmdc:dobj-11-j6hh6111 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d739fc9668c7cdf9ddc040214f60cf9 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d739fc9668c7cdf9ddc040214f60cf9 nmdc:dobj-11-dta4w986 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d739fc9668c7cdf9ddc040214f60cf9 nmdc:dobj-11-12vy8845 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:99b86a6cbd2e5f5b1a7ffa0222fc0c78 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99b86a6cbd2e5f5b1a7ffa0222fc0c78 nmdc:dobj-11-dj8h6d19 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99b86a6cbd2e5f5b1a7ffa0222fc0c78 nmdc:dobj-11-7207df05 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5975aa9e874a2aee8c733ae8c679cc0a -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5975aa9e874a2aee8c733ae8c679cc0a nmdc:dobj-11-80g0mc24 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5975aa9e874a2aee8c733ae8c679cc0a nmdc:dobj-11-wcfn0v93 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa nmdc:dobj-11-rf81a931 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa nmdc:dobj-11-tg8t4846 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16548c714efadc888fc21e9dc91cd38c -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16548c714efadc888fc21e9dc91cd38c nmdc:dobj-11-prqrcv90 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16548c714efadc888fc21e9dc91cd38c nmdc:dobj-11-c4qf6e38 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02d268c49f49ec83b65b6395555ee780 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02d268c49f49ec83b65b6395555ee780 nmdc:dobj-11-58dcpm62 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02d268c49f49ec83b65b6395555ee780 nmdc:dobj-11-5wqxmj14 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c nmdc:dobj-11-axm3em87 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c nmdc:dobj-11-f403nn73 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe8030bc7f875c91dc1261824bde2d32 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe8030bc7f875c91dc1261824bde2d32 nmdc:dobj-11-yjf0q690 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-mczfpv60.1/nmdc_wfrbt-11-mczfpv60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe8030bc7f875c91dc1261824bde2d32 nmdc:dobj-11-4vrzzc76 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfrbt-11-wvsksd75.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mczfpv60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfrbt-11-mczfpv60.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-g9t2xf29 INFO:root:omics_processing_id: nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a573eec92876f6621ae5305d9ed3bd2 nmdc:dobj-11-ay6wj371 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a573eec92876f6621ae5305d9ed3bd2 nmdc:dobj-11-4xwaja62 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-b8rmfw44 -INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-k9an6v23.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrqc-11-k9an6v23.1 +INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2beg6798.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2beg6798.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f28407b79185b4e3c313f40159eb14ec -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrqc-11-k9an6v23.1/nmdc_wfrqc-11-k9an6v23.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f28407b79185b4e3c313f40159eb14ec nmdc:dobj-11-xxzxx344 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrqc-11-2beg6798.1/nmdc_wfrqc-11-2beg6798.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f28407b79185b4e3c313f40159eb14ec nmdc:dobj-11-dyz8b413 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k9an6v23.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfrqc-11-k9an6v23.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2beg6798.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfrqc-11-2beg6798.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-b8rmfw44 -INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-a6xgy606.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-a6xgy606.1 +INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-47h57a81.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-47h57a81.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e71569c6e5d1b93e9b9db9135aabaf7 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-a6xgy606.1/nmdc_wfmgas-11-a6xgy606.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e71569c6e5d1b93e9b9db9135aabaf7 nmdc:dobj-11-qdfg6263 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-47h57a81.1/nmdc_wfmgas-11-47h57a81.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e71569c6e5d1b93e9b9db9135aabaf7 nmdc:dobj-11-tajra951 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a6xgy606.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-47h57a81.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5473910671d0c5c169246a972dbf619 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-a6xgy606.1/nmdc_wfmgas-11-a6xgy606.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5473910671d0c5c169246a972dbf619 nmdc:dobj-11-1tyw9w40 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-47h57a81.1/nmdc_wfmgas-11-47h57a81.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5473910671d0c5c169246a972dbf619 nmdc:dobj-11-0x1en487 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a6xgy606.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-47h57a81.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:69a51c8e981eaed934c8000fd16fc7d9 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-a6xgy606.1/nmdc_wfmgas-11-a6xgy606.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:69a51c8e981eaed934c8000fd16fc7d9 nmdc:dobj-11-qrhtst46 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-47h57a81.1/nmdc_wfmgas-11-47h57a81.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:69a51c8e981eaed934c8000fd16fc7d9 nmdc:dobj-11-38vsr314 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a6xgy606.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-47h57a81.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c1f0442578d7649ce41a599eb14d091 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-a6xgy606.1/nmdc_wfmgas-11-a6xgy606.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c1f0442578d7649ce41a599eb14d091 nmdc:dobj-11-ze1q1920 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-47h57a81.1/nmdc_wfmgas-11-47h57a81.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c1f0442578d7649ce41a599eb14d091 nmdc:dobj-11-1ewady55 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a6xgy606.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-47h57a81.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75285f282f19f1277195e80035bc15c1 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-a6xgy606.1/nmdc_wfmgas-11-a6xgy606.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75285f282f19f1277195e80035bc15c1 nmdc:dobj-11-v0e7sn38 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-47h57a81.1/nmdc_wfmgas-11-47h57a81.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75285f282f19f1277195e80035bc15c1 nmdc:dobj-11-3p1k3191 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a6xgy606.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfmgas-11-a6xgy606.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-47h57a81.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfmgas-11-47h57a81.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-b8rmfw44 -INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-bh3d9154.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1 +INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-x24pbe58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4972393ee4a6ddec7e85c6c1cbecfa06 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4972393ee4a6ddec7e85c6c1cbecfa06 nmdc:dobj-11-9mjwyw54 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4972393ee4a6ddec7e85c6c1cbecfa06 nmdc:dobj-11-vt31c192 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52e679ca629ec3a1362cfc1cfe322634 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52e679ca629ec3a1362cfc1cfe322634 nmdc:dobj-11-a68zx339 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52e679ca629ec3a1362cfc1cfe322634 nmdc:dobj-11-3jgapa95 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe51c74e0d293fa876a4901ac324f4c2 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe51c74e0d293fa876a4901ac324f4c2 nmdc:dobj-11-07mt3238 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe51c74e0d293fa876a4901ac324f4c2 nmdc:dobj-11-zw6gcd07 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4be597d8228615626aaeacf3a49ff1f1 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4be597d8228615626aaeacf3a49ff1f1 nmdc:dobj-11-f00f9p29 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4be597d8228615626aaeacf3a49ff1f1 nmdc:dobj-11-yy4x8017 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9698d68c9284f872a7dbd35bb65ac6a -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9698d68c9284f872a7dbd35bb65ac6a nmdc:dobj-11-r98fzt72 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9698d68c9284f872a7dbd35bb65ac6a nmdc:dobj-11-f7b1r615 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:624228246f986e137e024254248de1b5 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:624228246f986e137e024254248de1b5 nmdc:dobj-11-hg772k71 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:624228246f986e137e024254248de1b5 nmdc:dobj-11-m483dz12 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e25ad52b779d9726eb5b560ecaa7324b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e25ad52b779d9726eb5b560ecaa7324b nmdc:dobj-11-9qa80c13 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e25ad52b779d9726eb5b560ecaa7324b nmdc:dobj-11-gqws1541 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a024c99e60397c07ea093f5b54c16c22 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a024c99e60397c07ea093f5b54c16c22 nmdc:dobj-11-t1nraz18 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a024c99e60397c07ea093f5b54c16c22 nmdc:dobj-11-1jegy884 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:443956865b96dafaacf0840ce48af215 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:443956865b96dafaacf0840ce48af215 nmdc:dobj-11-5bf93d22 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-x24pbe58.1/nmdc_wfrbt-11-x24pbe58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:443956865b96dafaacf0840ce48af215 nmdc:dobj-11-37hrx832 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfrbt-11-bh3d9154.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x24pbe58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfrbt-11-x24pbe58.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-b8rmfw44 INFO:root:omics_processing_id: nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa30e2045705f394631c65180c5199a nmdc:dobj-11-vtv1jk79 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa30e2045705f394631c65180c5199a nmdc:dobj-11-6jf5k508 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-9b5r3122 -INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sm9krs58.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-sm9krs58.1 +INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-byta4w07.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-byta4w07.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ddbc9424f94d92db9d78d0c00b89c49 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-sm9krs58.1/nmdc_wfrqc-11-sm9krs58.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ddbc9424f94d92db9d78d0c00b89c49 nmdc:dobj-11-rbs5mz26 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-byta4w07.1/nmdc_wfrqc-11-byta4w07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ddbc9424f94d92db9d78d0c00b89c49 nmdc:dobj-11-wnk5xt55 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sm9krs58.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfrqc-11-sm9krs58.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-byta4w07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfrqc-11-byta4w07.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-9b5r3122 -INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wkhm1416.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1 +INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-zeb4bp20.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-zeb4bp20.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77530c3056fbba7914f2d98baf3fedd0 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77530c3056fbba7914f2d98baf3fedd0 nmdc:dobj-11-559y2613 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-zeb4bp20.1/nmdc_wfmgas-11-zeb4bp20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77530c3056fbba7914f2d98baf3fedd0 nmdc:dobj-11-246dew29 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zeb4bp20.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0a6e994ecf21ff02d973c3a8d015a63 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0a6e994ecf21ff02d973c3a8d015a63 nmdc:dobj-11-6bpnt464 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-zeb4bp20.1/nmdc_wfmgas-11-zeb4bp20.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0a6e994ecf21ff02d973c3a8d015a63 nmdc:dobj-11-4xf5wr41 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zeb4bp20.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c3861f53217f359d22be182d2c58936 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c3861f53217f359d22be182d2c58936 nmdc:dobj-11-7bxf7q83 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-zeb4bp20.1/nmdc_wfmgas-11-zeb4bp20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c3861f53217f359d22be182d2c58936 nmdc:dobj-11-6acfm229 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zeb4bp20.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec920dd0af387efe10935cd876f90164 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec920dd0af387efe10935cd876f90164 nmdc:dobj-11-g4v1ta56 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-zeb4bp20.1/nmdc_wfmgas-11-zeb4bp20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec920dd0af387efe10935cd876f90164 nmdc:dobj-11-r338k334 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zeb4bp20.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3a366b4c1b9c56427d411f26b766dcb -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3a366b4c1b9c56427d411f26b766dcb nmdc:dobj-11-n1zptb55 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-zeb4bp20.1/nmdc_wfmgas-11-zeb4bp20.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3a366b4c1b9c56427d411f26b766dcb nmdc:dobj-11-tcp6kh28 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfmgas-11-wkhm1416.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zeb4bp20.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b502bbfab4472b9f807e42da6669ff03 nmdc:dobj-11-z51t3889 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b502bbfab4472b9f807e42da6669ff03 nmdc:dobj-11-29e8fe60 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dfe464eccd67275b1a2260b3a220a989 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfe464eccd67275b1a2260b3a220a989 nmdc:dobj-11-v40rph54 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfe464eccd67275b1a2260b3a220a989 nmdc:dobj-11-astnag97 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b58ec241e99903bab584889485b2e6e -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b58ec241e99903bab584889485b2e6e nmdc:dobj-11-gn36xd63 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b58ec241e99903bab584889485b2e6e nmdc:dobj-11-c35mry87 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 nmdc:dobj-11-ykzt6023 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 nmdc:dobj-11-7fbfq288 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:17e52966db1deffee78333283d09c1e6 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:17e52966db1deffee78333283d09c1e6 nmdc:dobj-11-6dc12v16 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:17e52966db1deffee78333283d09c1e6 nmdc:dobj-11-mb5w5w40 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:418fdfd8511374f352cc1874a62900ee -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:418fdfd8511374f352cc1874a62900ee nmdc:dobj-11-x4vs0d91 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:418fdfd8511374f352cc1874a62900ee nmdc:dobj-11-sm4aj054 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:392ed4abdde861ca7b0c054ef1a84d58 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:392ed4abdde861ca7b0c054ef1a84d58 nmdc:dobj-11-8hxsy975 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:392ed4abdde861ca7b0c054ef1a84d58 nmdc:dobj-11-ghtq0185 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:678f73fd90526668a53f9b85569ae668 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:678f73fd90526668a53f9b85569ae668 nmdc:dobj-11-ft35va39 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:678f73fd90526668a53f9b85569ae668 nmdc:dobj-11-spj1xc73 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae7950a56988de4518d577ddd9407193 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae7950a56988de4518d577ddd9407193 nmdc:dobj-11-7jyaq906 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-5ke7vx27.1/nmdc_wfrbt-11-5ke7vx27.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae7950a56988de4518d577ddd9407193 nmdc:dobj-11-byyjts25 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfrbt-11-34gqgg60.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5ke7vx27.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfrbt-11-5ke7vx27.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9b5r3122 INFO:root:omics_processing_id: nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61a97e80cb6d26e90f140f38b008abab nmdc:dobj-11-30r5ct51 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61a97e80cb6d26e90f140f38b008abab nmdc:dobj-11-g0xed960 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-6evhzd33 -INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3k57f380.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrqc-11-3k57f380.1 +INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2gzjd339.1 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nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfrqc-11-3k57f380.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2gzjd339.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfrqc-11-2gzjd339.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-6evhzd33 -INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-frn8pv20.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1 +INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bdwspr58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-bdwspr58.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:abc6615b11cef93b8d3ec01850d0969f -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abc6615b11cef93b8d3ec01850d0969f nmdc:dobj-11-29d6hw96 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-bdwspr58.1/nmdc_wfmgas-11-bdwspr58.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abc6615b11cef93b8d3ec01850d0969f nmdc:dobj-11-vyk8qh04 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bdwspr58.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1676817d11fb0a8a2253b3ad8c349efb -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcc861fad2312fe5cf8af409cb9b899b nmdc:dobj-11-0mpfvg27 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-bdwspr58.1/nmdc_wfmgas-11-bdwspr58.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcc861fad2312fe5cf8af409cb9b899b nmdc:dobj-11-x603ms11 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bdwspr58.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7fbe406ab0837d507ceec7f5eb023be4 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fbe406ab0837d507ceec7f5eb023be4 nmdc:dobj-11-nf8vt791 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-bdwspr58.1/nmdc_wfmgas-11-bdwspr58.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fbe406ab0837d507ceec7f5eb023be4 nmdc:dobj-11-8qmse074 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bdwspr58.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2716879930e592b68f9b8c743955c594 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2716879930e592b68f9b8c743955c594 nmdc:dobj-11-ndsat231 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-bdwspr58.1/nmdc_wfmgas-11-bdwspr58.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2716879930e592b68f9b8c743955c594 nmdc:dobj-11-vm04jm83 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfmgas-11-frn8pv20.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bdwspr58.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfmgas-11-bdwspr58.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-6evhzd33 -INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-3dttby02.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1 +INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-yy8d9a80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:27d4ee97741634f477cb80fe90502cb1 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27d4ee97741634f477cb80fe90502cb1 nmdc:dobj-11-9xsabq78 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27d4ee97741634f477cb80fe90502cb1 nmdc:dobj-11-hsz5ng05 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc nmdc:dobj-11-q0s1d758 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc nmdc:dobj-11-t73gdh85 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46f4d0431ee1c17a9fa63a699190d48a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46f4d0431ee1c17a9fa63a699190d48a nmdc:dobj-11-8sppe050 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46f4d0431ee1c17a9fa63a699190d48a nmdc:dobj-11-3yvpha76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:078eaa687d5fb03268c8d075ea0fc698 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:078eaa687d5fb03268c8d075ea0fc698 nmdc:dobj-11-1cfqnb64 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:078eaa687d5fb03268c8d075ea0fc698 nmdc:dobj-11-qvavsh61 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5cfab3386ea0289c12df7adf724aedb2 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5cfab3386ea0289c12df7adf724aedb2 nmdc:dobj-11-451egc29 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5cfab3386ea0289c12df7adf724aedb2 nmdc:dobj-11-vewh4q59 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8751a56c3673edf134302b976d160b76 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8751a56c3673edf134302b976d160b76 nmdc:dobj-11-xcn55g46 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8751a56c3673edf134302b976d160b76 nmdc:dobj-11-fg0gyx64 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1381039de3a60dc7ab5ad30679eec98e -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1381039de3a60dc7ab5ad30679eec98e nmdc:dobj-11-qrj41x42 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1381039de3a60dc7ab5ad30679eec98e nmdc:dobj-11-ax1pym73 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:568a5dc85e94b6f90d3811f5cf953592 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:568a5dc85e94b6f90d3811f5cf953592 nmdc:dobj-11-8aemrb92 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:568a5dc85e94b6f90d3811f5cf953592 nmdc:dobj-11-c9q5d259 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0f5be7b98b9076e8a7472d3a591250b -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f5be7b98b9076e8a7472d3a591250b nmdc:dobj-11-025c7432 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-yy8d9a80.1/nmdc_wfrbt-11-yy8d9a80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f5be7b98b9076e8a7472d3a591250b nmdc:dobj-11-jeycfa03 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfrbt-11-3dttby02.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yy8d9a80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfrbt-11-yy8d9a80.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-6evhzd33 INFO:root:omics_processing_id: nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e84b6d72daf43591617f4c278a8540f nmdc:dobj-11-e5gnge50 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e84b6d72daf43591617f4c278a8540f nmdc:dobj-11-jcf1g654 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-1h7pv713 -INFO:root:New activity id created for nmdc:omprc-11-1h7pv713 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-pvk8jk17.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrqc-11-pvk8jk17.1 +INFO:root:New activity id created for nmdc:omprc-11-1h7pv713 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-twnt1k11.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8daa4e616f01adecebfec90bc9130985 nmdc:dobj-11-9hqhg775 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8daa4e616f01adecebfec90bc9130985 nmdc:dobj-11-ajqv5c66 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a2a5d0c8a30aeb106361a08fa17db00 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a2a5d0c8a30aeb106361a08fa17db00 nmdc:dobj-11-jfwkaf81 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a2a5d0c8a30aeb106361a08fa17db00 nmdc:dobj-11-421vqh06 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41efc00020b49913588cbde1f6c9d701 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41efc00020b49913588cbde1f6c9d701 nmdc:dobj-11-209dbr78 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41efc00020b49913588cbde1f6c9d701 nmdc:dobj-11-her69669 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:156e32e85e85365894929bd421fe30f6 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:156e32e85e85365894929bd421fe30f6 nmdc:dobj-11-2nqvxh70 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:156e32e85e85365894929bd421fe30f6 nmdc:dobj-11-crt0sg52 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8c409788042d02d9eaac0dabdfc82ef -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8c409788042d02d9eaac0dabdfc82ef nmdc:dobj-11-qvbtbx33 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8c409788042d02d9eaac0dabdfc82ef nmdc:dobj-11-2x3ja433 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25c22f7a2e3c7594fd619e68c21bbf7b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25c22f7a2e3c7594fd619e68c21bbf7b nmdc:dobj-11-525hdh92 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25c22f7a2e3c7594fd619e68c21bbf7b nmdc:dobj-11-0qw4fj24 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:209438a5ee7b712c9f167c42ac9dea49 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:209438a5ee7b712c9f167c42ac9dea49 nmdc:dobj-11-0ze76235 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:209438a5ee7b712c9f167c42ac9dea49 nmdc:dobj-11-9cpnbp92 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 nmdc:dobj-11-4d47ea21 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 nmdc:dobj-11-kdpkae93 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84e2bf02fb5e6ee6d02eac4406ea02db -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84e2bf02fb5e6ee6d02eac4406ea02db nmdc:dobj-11-wrp5jm73 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-thq4mn14.1/nmdc_wfrbt-11-thq4mn14.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84e2bf02fb5e6ee6d02eac4406ea02db nmdc:dobj-11-56xw9p97 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3be418a84679c9b906d0ae0e3fb2fde1 nmdc:wfrbt-11-q6d63p86.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-thq4mn14.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3be418a84679c9b906d0ae0e3fb2fde1 nmdc:wfrbt-11-thq4mn14.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-1h7pv713 INFO:root:omics_processing_id: nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f0c6c7be34ce22ab91df9a75f3e4379 nmdc:dobj-11-52qvpg38 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f0c6c7be34ce22ab91df9a75f3e4379 nmdc:dobj-11-84t0gx49 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-1xy9v450 -INFO:root:New activity id created for nmdc:omprc-11-1xy9v450 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ktn6vf82.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrqc-11-ktn6vf82.1 +INFO:root:New activity id created for nmdc:omprc-11-1xy9v450 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3g3zr327.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrqc-11-3g3zr327.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d199598f6ccfbe4194abf10379ce66a1 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrqc-11-ktn6vf82.1/nmdc_wfrqc-11-ktn6vf82.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d199598f6ccfbe4194abf10379ce66a1 nmdc:dobj-11-nfwd8p78 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrqc-11-3g3zr327.1/nmdc_wfrqc-11-3g3zr327.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d199598f6ccfbe4194abf10379ce66a1 nmdc:dobj-11-6pypxj97 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ktn6vf82.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3g3zr327.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd59a03d1936c277c41633374a0cf06d -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrqc-11-ktn6vf82.1/nmdc_wfrqc-11-ktn6vf82.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd59a03d1936c277c41633374a0cf06d nmdc:dobj-11-c1yp2n87 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrqc-11-3g3zr327.1/nmdc_wfrqc-11-3g3zr327.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd59a03d1936c277c41633374a0cf06d nmdc:dobj-11-6xrvwj97 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ktn6vf82.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9822da1d2cddb75b48db56ce5c03feaf nmdc:wfrqc-11-ktn6vf82.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3g3zr327.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9822da1d2cddb75b48db56ce5c03feaf nmdc:wfrqc-11-3g3zr327.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-1xy9v450 -INFO:root:New activity id created for nmdc:omprc-11-1xy9v450 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jhpa9s81.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1 +INFO:root:New activity id created for nmdc:omprc-11-1xy9v450 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-zskkgw42.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-zskkgw42.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c69f65e09e27905cc8d3c31f063543b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c69f65e09e27905cc8d3c31f063543b nmdc:dobj-11-9abkpz36 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-zskkgw42.1/nmdc_wfmgas-11-zskkgw42.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c69f65e09e27905cc8d3c31f063543b nmdc:dobj-11-39j7fx11 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zskkgw42.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7522a920a9afa2cb73f32515b31deca1 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7522a920a9afa2cb73f32515b31deca1 nmdc:dobj-11-z0a4ye67 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-zskkgw42.1/nmdc_wfmgas-11-zskkgw42.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7522a920a9afa2cb73f32515b31deca1 nmdc:dobj-11-me1zp258 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zskkgw42.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f91be7d590df595c0a752a020fca3e7e -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f91be7d590df595c0a752a020fca3e7e nmdc:dobj-11-h85gec40 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-zskkgw42.1/nmdc_wfmgas-11-zskkgw42.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f91be7d590df595c0a752a020fca3e7e nmdc:dobj-11-p67tav97 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zskkgw42.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da69f52f5804b6ecff8da97142240f2f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da69f52f5804b6ecff8da97142240f2f nmdc:dobj-11-pnc9y430 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-zskkgw42.1/nmdc_wfmgas-11-zskkgw42.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da69f52f5804b6ecff8da97142240f2f nmdc:dobj-11-tqn2qd52 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zskkgw42.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3f2d85d7569163784320b7d12f9ccc2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3f2d85d7569163784320b7d12f9ccc2 nmdc:dobj-11-25qhaw83 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-zskkgw42.1/nmdc_wfmgas-11-zskkgw42.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3f2d85d7569163784320b7d12f9ccc2 nmdc:dobj-11-ng4w3k24 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9822da1d2cddb75b48db56ce5c03feaf nmdc:wfmgas-11-jhpa9s81.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zskkgw42.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9822da1d2cddb75b48db56ce5c03feaf nmdc:wfmgas-11-zskkgw42.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-1xy9v450 -INFO:root:New activity id created for nmdc:omprc-11-1xy9v450 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1jfa2y46.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1 +INFO:root:New activity id created for nmdc:omprc-11-1xy9v450 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-4vb21x14.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:838feed210e675f80ea726f5c0a89927 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:838feed210e675f80ea726f5c0a89927 nmdc:dobj-11-ngy1n542 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:838feed210e675f80ea726f5c0a89927 nmdc:dobj-11-cn0cv882 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36db98ccafccefe424de6a9eaca9baa8 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36db98ccafccefe424de6a9eaca9baa8 nmdc:dobj-11-5jhmc889 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36db98ccafccefe424de6a9eaca9baa8 nmdc:dobj-11-q0471f50 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5abd608f71f5b1ab7c57679c58b564e -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5abd608f71f5b1ab7c57679c58b564e nmdc:dobj-11-neprye73 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5abd608f71f5b1ab7c57679c58b564e nmdc:dobj-11-xe0hm584 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3949585d6a27e0e4a58770c563674912 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3949585d6a27e0e4a58770c563674912 nmdc:dobj-11-0qxh2c14 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3949585d6a27e0e4a58770c563674912 nmdc:dobj-11-k2mp9417 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7cc9f39ac328dba5930d0c2c31d869c7 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7cc9f39ac328dba5930d0c2c31d869c7 nmdc:dobj-11-c0p6me73 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7cc9f39ac328dba5930d0c2c31d869c7 nmdc:dobj-11-pm0yat83 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f18eed5d4249afa49805e301110be150 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f18eed5d4249afa49805e301110be150 nmdc:dobj-11-zvpbq682 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f18eed5d4249afa49805e301110be150 nmdc:dobj-11-dn3mnj82 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b68a50fcbb28e49af30ad5094f1621c1 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b68a50fcbb28e49af30ad5094f1621c1 nmdc:dobj-11-0mayb085 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b68a50fcbb28e49af30ad5094f1621c1 nmdc:dobj-11-c6xewm07 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd403a1c7ab421feeca3d5858b9bc4ab -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd403a1c7ab421feeca3d5858b9bc4ab nmdc:dobj-11-v1ktwd52 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd403a1c7ab421feeca3d5858b9bc4ab nmdc:dobj-11-s5hwj632 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:832c6e017ce77e8dfa710ad1d65b6c03 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:832c6e017ce77e8dfa710ad1d65b6c03 nmdc:dobj-11-qx457p31 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-4vb21x14.1/nmdc_wfrbt-11-4vb21x14.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:832c6e017ce77e8dfa710ad1d65b6c03 nmdc:dobj-11-1xvvb654 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9822da1d2cddb75b48db56ce5c03feaf nmdc:wfrbt-11-1jfa2y46.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4vb21x14.1_kraken2_krona.html 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nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfrqc-11-xcn49454.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7esfh668.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfrqc-11-7esfh668.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-hmqcq810 -INFO:root:New activity id created for nmdc:omprc-11-hmqcq810 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hwk8h122.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1 +INFO:root:New activity id created for nmdc:omprc-11-hmqcq810 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-060mqc35.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-060mqc35.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92bb0f88e88ae860971924a6006f7ee6 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1/nmdc_wfmgas-11-hwk8h122.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92bb0f88e88ae860971924a6006f7ee6 nmdc:dobj-11-13x27620 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-060mqc35.1/nmdc_wfmgas-11-060mqc35.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92bb0f88e88ae860971924a6006f7ee6 nmdc:dobj-11-hhd51x88 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hwk8h122.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-060mqc35.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37662dfa44f2cf6eea410f8e7d5c3359 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1/nmdc_wfmgas-11-hwk8h122.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:200239924baef39c49577b0eeda7563a nmdc:dobj-11-ja3eb162 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-060mqc35.1/nmdc_wfmgas-11-060mqc35.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:200239924baef39c49577b0eeda7563a nmdc:dobj-11-mv09dg82 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hwk8h122.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-060mqc35.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c435f75c7f44178a2b2a341694910fbe -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1/nmdc_wfmgas-11-hwk8h122.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c435f75c7f44178a2b2a341694910fbe nmdc:dobj-11-8rr7j573 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-060mqc35.1/nmdc_wfmgas-11-060mqc35.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c435f75c7f44178a2b2a341694910fbe nmdc:dobj-11-wj93qg14 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hwk8h122.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfmgas-11-hwk8h122.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-060mqc35.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c31bb7727915abb60531b5f1d6ebe078 nmdc:dobj-11-74fjxg77 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c31bb7727915abb60531b5f1d6ebe078 nmdc:dobj-11-x6rb7k16 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:798a9e4ea0aeaf42662474256caa2933 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:798a9e4ea0aeaf42662474256caa2933 nmdc:dobj-11-aw0sk861 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:798a9e4ea0aeaf42662474256caa2933 nmdc:dobj-11-cnd3rb96 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 nmdc:dobj-11-c6ktsz09 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 nmdc:dobj-11-vaxd8615 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bd7f6549ae98f5ee74ee57b77018ccd -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bd7f6549ae98f5ee74ee57b77018ccd nmdc:dobj-11-d3vc7w44 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bd7f6549ae98f5ee74ee57b77018ccd nmdc:dobj-11-b3pehc78 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e47c2276096e22b1b5b38f3fa1aff710 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e47c2276096e22b1b5b38f3fa1aff710 nmdc:dobj-11-wwn26093 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e47c2276096e22b1b5b38f3fa1aff710 nmdc:dobj-11-xbk5y611 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90b469897a00f34db51efab16f076189 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90b469897a00f34db51efab16f076189 nmdc:dobj-11-xax6x133 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90b469897a00f34db51efab16f076189 nmdc:dobj-11-qq2m5t12 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:812af0a1cf69a1241225e79a056099e3 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:812af0a1cf69a1241225e79a056099e3 nmdc:dobj-11-jrb2js84 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:812af0a1cf69a1241225e79a056099e3 nmdc:dobj-11-5wgb6e28 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e4bc9e2005f6c6e74c8414edea24420 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e4bc9e2005f6c6e74c8414edea24420 nmdc:dobj-11-k2wpnm25 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e4bc9e2005f6c6e74c8414edea24420 nmdc:dobj-11-p1pr4814 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e01d9eff79cc154c9f4020eaf5d2264 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e01d9eff79cc154c9f4020eaf5d2264 nmdc:dobj-11-2brcgb23 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-p9mnzz12.1/nmdc_wfrbt-11-p9mnzz12.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e01d9eff79cc154c9f4020eaf5d2264 nmdc:dobj-11-14c45d95 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfrbt-11-gfy4n529.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-p9mnzz12.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfrbt-11-p9mnzz12.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-hmqcq810 INFO:root:omics_processing_id: nmdc:omprc-11-1a2d4549 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f05dd5770ff3ebe3b56f008854bac78 nmdc:dobj-11-5n1cwb86 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f05dd5770ff3ebe3b56f008854bac78 nmdc:dobj-11-z7yehz16 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-1a2d4549 -INFO:root:New activity id created for nmdc:omprc-11-1a2d4549 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9ww01x07.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfrqc-11-9ww01x07.1 +INFO:root:New activity id created for nmdc:omprc-11-1a2d4549 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-jfhsn705.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jfhsn705.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cbc8fa5c109892ae9f37600c2b65094e -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfrqc-11-9ww01x07.1/nmdc_wfrqc-11-9ww01x07.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbc8fa5c109892ae9f37600c2b65094e nmdc:dobj-11-zbpe7t02 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfrqc-11-jfhsn705.1/nmdc_wfrqc-11-jfhsn705.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbc8fa5c109892ae9f37600c2b65094e nmdc:dobj-11-xcr5hd35 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-1a2d4549 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ww01x07.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 nmdc:wfrqc-11-9ww01x07.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jfhsn705.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 nmdc:wfrqc-11-jfhsn705.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-1a2d4549 -INFO:root:New activity id created for nmdc:omprc-11-1a2d4549 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jmat7061.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1 +INFO:root:New activity id created for nmdc:omprc-11-1a2d4549 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-gm5kvs82.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-gm5kvs82.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be1f0af45c3e6d5f8eec727320987b95 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be1f0af45c3e6d5f8eec727320987b95 nmdc:dobj-11-m2rweb27 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-gm5kvs82.1/nmdc_wfmgas-11-gm5kvs82.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be1f0af45c3e6d5f8eec727320987b95 nmdc:dobj-11-qe0nwh51 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-1a2d4549 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gm5kvs82.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:545ac8cf12280a833c30b9de5171c9de -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:545ac8cf12280a833c30b9de5171c9de nmdc:dobj-11-xr5fmx38 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-gm5kvs82.1/nmdc_wfmgas-11-gm5kvs82.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:545ac8cf12280a833c30b9de5171c9de nmdc:dobj-11-rseye261 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-1a2d4549 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gm5kvs82.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f55760dd8a7d7701ffb33e6b89cd0210 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f55760dd8a7d7701ffb33e6b89cd0210 nmdc:dobj-11-f8ebmg57 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-gm5kvs82.1/nmdc_wfmgas-11-gm5kvs82.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f55760dd8a7d7701ffb33e6b89cd0210 nmdc:dobj-11-3nwz7h64 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-1a2d4549 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gm5kvs82.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed641164309b15152dc25fbff08ec3e7 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed641164309b15152dc25fbff08ec3e7 nmdc:dobj-11-n0a2dy72 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-gm5kvs82.1/nmdc_wfmgas-11-gm5kvs82.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed641164309b15152dc25fbff08ec3e7 nmdc:dobj-11-njq97661 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-1a2d4549 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gm5kvs82.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a11794842326ebb25fc702b5862395b -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a11794842326ebb25fc702b5862395b nmdc:dobj-11-3k9t9v50 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-gm5kvs82.1/nmdc_wfmgas-11-gm5kvs82.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a11794842326ebb25fc702b5862395b nmdc:dobj-11-8atjxc96 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-1a2d4549 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 nmdc:wfmgas-11-jmat7061.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gm5kvs82.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 nmdc:wfmgas-11-gm5kvs82.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-1a2d4549 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-1a2d4549 INFO:root:omics_processing_id: nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9f1ddf2e1eca8e9c8a18b5096433c54 nmdc:dobj-11-e142rn17 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9f1ddf2e1eca8e9c8a18b5096433c54 nmdc:dobj-11-79a34q64 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5fgefy28 -INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hf70s042.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-hf70s042.1 +INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-w81w7s34.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-w81w7s34.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a867d66faabc1e340c31bb9c882127c -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-hf70s042.1/nmdc_wfrqc-11-hf70s042.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a867d66faabc1e340c31bb9c882127c nmdc:dobj-11-4hqz1y21 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-w81w7s34.1/nmdc_wfrqc-11-w81w7s34.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a867d66faabc1e340c31bb9c882127c nmdc:dobj-11-ekzsns29 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hf70s042.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w81w7s34.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fc52f9de8c540cc0edac30c0f81dc61 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-hf70s042.1/nmdc_wfrqc-11-hf70s042.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fc52f9de8c540cc0edac30c0f81dc61 nmdc:dobj-11-x37ext25 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-w81w7s34.1/nmdc_wfrqc-11-w81w7s34.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fc52f9de8c540cc0edac30c0f81dc61 nmdc:dobj-11-7wk3fq25 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hf70s042.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfrqc-11-hf70s042.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w81w7s34.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfrqc-11-w81w7s34.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5fgefy28 -INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qqamk633.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1 +INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x9kyce29.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-x9kyce29.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 nmdc:dobj-11-beyhkc22 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-x9kyce29.1/nmdc_wfmgas-11-x9kyce29.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 nmdc:dobj-11-be1sp497 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x9kyce29.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1c52c10f78dd6ad514095c836994704 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1c52c10f78dd6ad514095c836994704 nmdc:dobj-11-jarmme97 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-x9kyce29.1/nmdc_wfmgas-11-x9kyce29.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1c52c10f78dd6ad514095c836994704 nmdc:dobj-11-2qy1t695 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x9kyce29.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d5bd20077c9f68e5434d4eb145b5235 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d5bd20077c9f68e5434d4eb145b5235 nmdc:dobj-11-ed4k8z08 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-x9kyce29.1/nmdc_wfmgas-11-x9kyce29.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d5bd20077c9f68e5434d4eb145b5235 nmdc:dobj-11-0qvg9790 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x9kyce29.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a9b318266bbf9747202ee6b19d163c5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a9b318266bbf9747202ee6b19d163c5 nmdc:dobj-11-gx98gq70 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-x9kyce29.1/nmdc_wfmgas-11-x9kyce29.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a9b318266bbf9747202ee6b19d163c5 nmdc:dobj-11-dbs7a689 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x9kyce29.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:367c3d138dbf10c772b48853b08bda60 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:367c3d138dbf10c772b48853b08bda60 nmdc:dobj-11-4mch4570 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-x9kyce29.1/nmdc_wfmgas-11-x9kyce29.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:367c3d138dbf10c772b48853b08bda60 nmdc:dobj-11-gphxfz14 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfmgas-11-qqamk633.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x9kyce29.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfmgas-11-x9kyce29.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-5fgefy28 -INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-66pfkv80.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1 +INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dhen7723.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82fe4e5311a521d5271e11cfec7e944e -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82fe4e5311a521d5271e11cfec7e944e nmdc:dobj-11-dazgh162 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82fe4e5311a521d5271e11cfec7e944e nmdc:dobj-11-50cef075 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bee4b758e80e4e4d8829bebf0618b13 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bee4b758e80e4e4d8829bebf0618b13 nmdc:dobj-11-4dqcbp04 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bee4b758e80e4e4d8829bebf0618b13 nmdc:dobj-11-mdsdtd88 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c523105f854b6ebdb0b90d69e331f3c4 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c523105f854b6ebdb0b90d69e331f3c4 nmdc:dobj-11-7bt2tj24 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c523105f854b6ebdb0b90d69e331f3c4 nmdc:dobj-11-pp8xem81 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea9e507877edf55b3534beff2f8ce84f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea9e507877edf55b3534beff2f8ce84f nmdc:dobj-11-ewt5b671 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea9e507877edf55b3534beff2f8ce84f nmdc:dobj-11-t4hrct56 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:06407789c5f04cfe027601a08b26e2d1 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06407789c5f04cfe027601a08b26e2d1 nmdc:dobj-11-ge9b1975 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06407789c5f04cfe027601a08b26e2d1 nmdc:dobj-11-5xms1g81 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41541759a6d5f17b651f851dc9b6192a -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41541759a6d5f17b651f851dc9b6192a nmdc:dobj-11-kyee3j49 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41541759a6d5f17b651f851dc9b6192a nmdc:dobj-11-kmz5g926 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24b21fa9194d3821932ea688976f1cdc -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24b21fa9194d3821932ea688976f1cdc nmdc:dobj-11-sn60yv46 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24b21fa9194d3821932ea688976f1cdc nmdc:dobj-11-3jrxxj51 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:06cbbccb88f0f4f2c5ed159061c5c65d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06cbbccb88f0f4f2c5ed159061c5c65d nmdc:dobj-11-f887vf03 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06cbbccb88f0f4f2c5ed159061c5c65d nmdc:dobj-11-2z5cbq51 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd58622718f0251e0cb9f3736ca3ec90 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd58622718f0251e0cb9f3736ca3ec90 nmdc:dobj-11-4qvt0z62 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-dhen7723.1/nmdc_wfrbt-11-dhen7723.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd58622718f0251e0cb9f3736ca3ec90 nmdc:dobj-11-xyjg8z64 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfrbt-11-66pfkv80.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dhen7723.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfrbt-11-dhen7723.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5fgefy28 INFO:root:omics_processing_id: nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:076ff634d28625c03f79842a9b3bb354 nmdc:dobj-11-gza5qs90 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:076ff634d28625c03f79842a9b3bb354 nmdc:dobj-11-z7ta2526 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-13gdjn24 -INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-epxe4s80.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrqc-11-epxe4s80.1 +INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-67jpdn82.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrqc-11-67jpdn82.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b3e1513f9dea9a1caf90021a33f588f -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrqc-11-epxe4s80.1/nmdc_wfrqc-11-epxe4s80.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b3e1513f9dea9a1caf90021a33f588f nmdc:dobj-11-1tjf3w37 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrqc-11-67jpdn82.1/nmdc_wfrqc-11-67jpdn82.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b3e1513f9dea9a1caf90021a33f588f nmdc:dobj-11-j116w656 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-epxe4s80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-67jpdn82.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94c4f26cd3bfe22749dfada6a85df549 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrqc-11-epxe4s80.1/nmdc_wfrqc-11-epxe4s80.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94c4f26cd3bfe22749dfada6a85df549 nmdc:dobj-11-g5yzfn49 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrqc-11-67jpdn82.1/nmdc_wfrqc-11-67jpdn82.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94c4f26cd3bfe22749dfada6a85df549 nmdc:dobj-11-4zfxet74 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-epxe4s80.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfrqc-11-epxe4s80.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-67jpdn82.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfrqc-11-67jpdn82.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-13gdjn24 -INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5ekhdb68.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1 +INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vvad9g12.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-vvad9g12.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7335d465520b07babf5397dfe9633945 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7335d465520b07babf5397dfe9633945 nmdc:dobj-11-9fvm5f97 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-vvad9g12.1/nmdc_wfmgas-11-vvad9g12.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7335d465520b07babf5397dfe9633945 nmdc:dobj-11-9xjey983 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vvad9g12.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e427ceb17df98fa3c9138ecfefb163b -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e427ceb17df98fa3c9138ecfefb163b nmdc:dobj-11-d3t1sq59 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-vvad9g12.1/nmdc_wfmgas-11-vvad9g12.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e427ceb17df98fa3c9138ecfefb163b nmdc:dobj-11-q7y4nt55 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vvad9g12.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89bc146abfc7fd7200250a905c714d15 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89bc146abfc7fd7200250a905c714d15 nmdc:dobj-11-0jdxam93 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-vvad9g12.1/nmdc_wfmgas-11-vvad9g12.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89bc146abfc7fd7200250a905c714d15 nmdc:dobj-11-ws9qx485 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vvad9g12.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed1b19ad42494558c2fff1fc35f2afa9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed1b19ad42494558c2fff1fc35f2afa9 nmdc:dobj-11-ycxxd532 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-vvad9g12.1/nmdc_wfmgas-11-vvad9g12.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed1b19ad42494558c2fff1fc35f2afa9 nmdc:dobj-11-92ksnc84 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vvad9g12.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85e71c34e863288c6036796051bf7123 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85e71c34e863288c6036796051bf7123 nmdc:dobj-11-30v96a92 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-vvad9g12.1/nmdc_wfmgas-11-vvad9g12.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85e71c34e863288c6036796051bf7123 nmdc:dobj-11-2zzmrp78 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfmgas-11-5ekhdb68.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vvad9g12.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfmgas-11-vvad9g12.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-13gdjn24 -INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qvg6pq80.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1 +INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-bssyjd63.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:abfda82b829a6f486e2e4357eae04617 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abfda82b829a6f486e2e4357eae04617 nmdc:dobj-11-fbpjsg82 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abfda82b829a6f486e2e4357eae04617 nmdc:dobj-11-hs22xz52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ad4e158d9409664f353c759d104cd03 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ad4e158d9409664f353c759d104cd03 nmdc:dobj-11-vkwe5q68 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ad4e158d9409664f353c759d104cd03 nmdc:dobj-11-a1q1fz75 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9feb6472b82630a835d826cddf6d372 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9feb6472b82630a835d826cddf6d372 nmdc:dobj-11-8g72k222 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9feb6472b82630a835d826cddf6d372 nmdc:dobj-11-8s4msv11 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37556f9d6d9e076d3a4ff7351de59195 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37556f9d6d9e076d3a4ff7351de59195 nmdc:dobj-11-2p77vn86 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37556f9d6d9e076d3a4ff7351de59195 nmdc:dobj-11-hk945e47 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9aff0c76859be07434ad33c701355628 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9aff0c76859be07434ad33c701355628 nmdc:dobj-11-bgsxtj89 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9aff0c76859be07434ad33c701355628 nmdc:dobj-11-9ec1pp51 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aab0ffee88319927d99955503be5d25c -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aab0ffee88319927d99955503be5d25c nmdc:dobj-11-sj190t91 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aab0ffee88319927d99955503be5d25c nmdc:dobj-11-h44cg841 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd67787fdedef21e1dae8d0273a2954e -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd67787fdedef21e1dae8d0273a2954e nmdc:dobj-11-8gq71c28 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd67787fdedef21e1dae8d0273a2954e nmdc:dobj-11-trn21c15 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e8a37758c99f077a094b8f0bee3e3084 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8a37758c99f077a094b8f0bee3e3084 nmdc:dobj-11-4raz8m06 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8a37758c99f077a094b8f0bee3e3084 nmdc:dobj-11-cvb04p22 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aec249c35e1c7db4d0295823c2473ce4 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aec249c35e1c7db4d0295823c2473ce4 nmdc:dobj-11-4tgw7936 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-bssyjd63.1/nmdc_wfrbt-11-bssyjd63.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aec249c35e1c7db4d0295823c2473ce4 nmdc:dobj-11-qkwbf221 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfrbt-11-qvg6pq80.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bssyjd63.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfrbt-11-bssyjd63.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-13gdjn24 INFO:root:omics_processing_id: nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b5fb58671da52ebbff9fc85324638ac nmdc:dobj-11-rxchea23 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b5fb58671da52ebbff9fc85324638ac nmdc:dobj-11-5vsetf63 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-cw2se491 -INFO:root:New activity id created for nmdc:omprc-11-cw2se491 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qmnkeg32.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-qmnkeg32.1 +INFO:root:New activity id created for nmdc:omprc-11-cw2se491 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-st679g95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-st679g95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:35c0f54b804137bde8ed81731a4d893d -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-qmnkeg32.1/nmdc_wfrqc-11-qmnkeg32.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35c0f54b804137bde8ed81731a4d893d nmdc:dobj-11-xr4jgd27 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-st679g95.1/nmdc_wfrqc-11-st679g95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35c0f54b804137bde8ed81731a4d893d nmdc:dobj-11-kycvs045 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qmnkeg32.1_filtered.fastq.gz 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path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e3d33b96dc2b39b2b0a4f498df1c982 nmdc:dobj-11-4rxfpr37 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-3h907x22.1/nmdc_wfrbt-11-3h907x22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e3d33b96dc2b39b2b0a4f498df1c982 nmdc:dobj-11-2wdnj513 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9f918130ae225680650bd4f9c1a1a76f nmdc:wfrbt-11-j3s4q586.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3h907x22.1_kraken2_krona.html 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nmdc:4a43bf91c943db8e9829ea992c576c8e nmdc:wfrqc-11-znfhav25.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x7996t72.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4a43bf91c943db8e9829ea992c576c8e nmdc:wfrqc-11-x7996t72.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-kxct1j50 -INFO:root:New activity id created for nmdc:omprc-11-kxct1j50 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5n8sf706.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1 +INFO:root:New activity id created for nmdc:omprc-11-kxct1j50 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-a4qcx092.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-a4qcx092.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9abbaf8bb8ec0d8f687d25a01e4ba8c7 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9abbaf8bb8ec0d8f687d25a01e4ba8c7 nmdc:dobj-11-jdxjf868 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-a4qcx092.1/nmdc_wfmgas-11-a4qcx092.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9abbaf8bb8ec0d8f687d25a01e4ba8c7 nmdc:dobj-11-0exweq22 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-kxct1j50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a4qcx092.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:552e73866c3a9542daf7cbe9ecb4eb5e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:552e73866c3a9542daf7cbe9ecb4eb5e nmdc:dobj-11-1pf5v802 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-a4qcx092.1/nmdc_wfmgas-11-a4qcx092.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:552e73866c3a9542daf7cbe9ecb4eb5e nmdc:dobj-11-nhtmb615 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-kxct1j50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a4qcx092.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d22adbc2f694c0fe06081271f2d70414 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d22adbc2f694c0fe06081271f2d70414 nmdc:dobj-11-3wa42t10 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-a4qcx092.1/nmdc_wfmgas-11-a4qcx092.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d22adbc2f694c0fe06081271f2d70414 nmdc:dobj-11-9gvy0f06 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-kxct1j50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a4qcx092.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e39a861965a826732018e11da3523f9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e39a861965a826732018e11da3523f9 nmdc:dobj-11-ed3bje50 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-a4qcx092.1/nmdc_wfmgas-11-a4qcx092.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e39a861965a826732018e11da3523f9 nmdc:dobj-11-h7nawe59 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-kxct1j50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a4qcx092.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0af96b416a01858dbe3ebeebfab48515 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0af96b416a01858dbe3ebeebfab48515 nmdc:dobj-11-hgrr4w53 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-a4qcx092.1/nmdc_wfmgas-11-a4qcx092.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0af96b416a01858dbe3ebeebfab48515 nmdc:dobj-11-ax3hbz66 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-kxct1j50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4a43bf91c943db8e9829ea992c576c8e nmdc:wfmgas-11-5n8sf706.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a4qcx092.1_pairedMapped_sorted.bam 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created for nmdc:omprc-11-a85hx178 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0tdbtr56.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-0tdbtr56.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc0fa28035cb17b7fa2b49660cdecd5d -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-2jr51m19.1/nmdc_wfrqc-11-2jr51m19.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc0fa28035cb17b7fa2b49660cdecd5d nmdc:dobj-11-rp90j932 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-0tdbtr56.1/nmdc_wfrqc-11-0tdbtr56.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc0fa28035cb17b7fa2b49660cdecd5d nmdc:dobj-11-hk40tb67 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2jr51m19.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0tdbtr56.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-2jr51m19.1/nmdc_wfrqc-11-2jr51m19.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 nmdc:dobj-11-sjxzfy79 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-0tdbtr56.1/nmdc_wfrqc-11-0tdbtr56.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 nmdc:dobj-11-02d54f10 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a85hx178 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-jnp3cw70.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 nmdc:dobj-11-q9e7xa83 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-jnp3cw70.1/nmdc_wfmgas-11-jnp3cw70.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 nmdc:dobj-11-6pm87s36 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jnp3cw70.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9273b988e3cd8a9ef33144e129834eca -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9273b988e3cd8a9ef33144e129834eca nmdc:dobj-11-9yxxtg47 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-jnp3cw70.1/nmdc_wfmgas-11-jnp3cw70.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9273b988e3cd8a9ef33144e129834eca nmdc:dobj-11-a9jfb683 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jnp3cw70.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f1737d3cebfb958e3317a38a1b9638d -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f1737d3cebfb958e3317a38a1b9638d nmdc:dobj-11-k9zsfc78 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-jnp3cw70.1/nmdc_wfmgas-11-jnp3cw70.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f1737d3cebfb958e3317a38a1b9638d nmdc:dobj-11-vr7rwa02 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jnp3cw70.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:582e46ab7e21c5151d7e01e33fa6fb0f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:582e46ab7e21c5151d7e01e33fa6fb0f nmdc:dobj-11-zp3x1q37 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-jnp3cw70.1/nmdc_wfmgas-11-jnp3cw70.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:582e46ab7e21c5151d7e01e33fa6fb0f nmdc:dobj-11-zt22ab62 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jnp3cw70.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a1daf7eeeb3197f5ea7d9350f79ec8e -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a1daf7eeeb3197f5ea7d9350f79ec8e nmdc:dobj-11-g1rapa38 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-jnp3cw70.1/nmdc_wfmgas-11-jnp3cw70.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a1daf7eeeb3197f5ea7d9350f79ec8e nmdc:dobj-11-3rmx6h95 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c27d9ea6403f00d6939b94ade5bb19a1 nmdc:wfmgas-11-gwmga613.1 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Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:023a447cc739b46db2c2eeb5d440c352 nmdc:dobj-11-a1ez7731 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:023a447cc739b46db2c2eeb5d440c352 nmdc:dobj-11-1rqcw841 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58310a3abb2fcde26fbc973721f7ab25 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58310a3abb2fcde26fbc973721f7ab25 nmdc:dobj-11-a81pkc76 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58310a3abb2fcde26fbc973721f7ab25 nmdc:dobj-11-qbfesp91 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bfe90287f58a65b9232f177e7b8429ea -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfe90287f58a65b9232f177e7b8429ea nmdc:dobj-11-3nwwvw52 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfe90287f58a65b9232f177e7b8429ea nmdc:dobj-11-1zvh1y04 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eab271aef23285a71c50e411294fa674 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eab271aef23285a71c50e411294fa674 nmdc:dobj-11-adc4s434 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eab271aef23285a71c50e411294fa674 nmdc:dobj-11-9kc6m088 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd5352c76241c60df60fd8e43e13208d -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd5352c76241c60df60fd8e43e13208d nmdc:dobj-11-phcpcr52 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd5352c76241c60df60fd8e43e13208d nmdc:dobj-11-bkwr0550 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c4414e23ae24e4c902673b6e271bb62 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c4414e23ae24e4c902673b6e271bb62 nmdc:dobj-11-sbe4th36 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c4414e23ae24e4c902673b6e271bb62 nmdc:dobj-11-wb7xz241 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e57315a6742ed7a21b68d10570bb7247 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e57315a6742ed7a21b68d10570bb7247 nmdc:dobj-11-erc9mv43 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e57315a6742ed7a21b68d10570bb7247 nmdc:dobj-11-670c4s30 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:313c08b83a542d886a3985d16fd1071c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:313c08b83a542d886a3985d16fd1071c nmdc:dobj-11-n0xhe990 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:313c08b83a542d886a3985d16fd1071c nmdc:dobj-11-6q9syp97 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a0c25fe760f0f7569f9deec217cccb77 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0c25fe760f0f7569f9deec217cccb77 nmdc:dobj-11-hpwpjs23 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-y0p8jq22.1/nmdc_wfrbt-11-y0p8jq22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0c25fe760f0f7569f9deec217cccb77 nmdc:dobj-11-ycr98684 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c27d9ea6403f00d6939b94ade5bb19a1 nmdc:wfrbt-11-9vebdj54.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0p8jq22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c27d9ea6403f00d6939b94ade5bb19a1 nmdc:wfrbt-11-y0p8jq22.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a85hx178 INFO:root:omics_processing_id: nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4acac4ba90588c9923ed2d02d3f516b7 nmdc:dobj-11-br7xnn26 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4acac4ba90588c9923ed2d02d3f516b7 nmdc:dobj-11-2pw4de64 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0qq1wf68 -INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4n8hth16.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrqc-11-4n8hth16.1 +INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-e8qe5a54.1 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nmdc:929283826cba31853761db726c97ef41 nmdc:wfrqc-11-4n8hth16.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-e8qe5a54.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:929283826cba31853761db726c97ef41 nmdc:wfrqc-11-e8qe5a54.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-0qq1wf68 -INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-40gmqe55.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1 +INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3j4r1p32.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-3j4r1p32.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a6f7572a276c5179f403be6dc6f1c6a4 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6f7572a276c5179f403be6dc6f1c6a4 nmdc:dobj-11-x2k5ng37 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-3j4r1p32.1/nmdc_wfmgas-11-3j4r1p32.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6f7572a276c5179f403be6dc6f1c6a4 nmdc:dobj-11-4m0s5664 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4r1p32.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcbd1a8e38b5b58ca2e25383e46bbe49 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcbd1a8e38b5b58ca2e25383e46bbe49 nmdc:dobj-11-2ttxb627 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-3j4r1p32.1/nmdc_wfmgas-11-3j4r1p32.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcbd1a8e38b5b58ca2e25383e46bbe49 nmdc:dobj-11-m75pvb90 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4r1p32.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:924abfaf7ce029d1c4f21f0ec9a26be4 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:924abfaf7ce029d1c4f21f0ec9a26be4 nmdc:dobj-11-063n2923 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-3j4r1p32.1/nmdc_wfmgas-11-3j4r1p32.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:924abfaf7ce029d1c4f21f0ec9a26be4 nmdc:dobj-11-kqzgq358 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4r1p32.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a7912ed567487e12d72e6ffe8737d9b -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a7912ed567487e12d72e6ffe8737d9b nmdc:dobj-11-eezxm709 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-3j4r1p32.1/nmdc_wfmgas-11-3j4r1p32.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a7912ed567487e12d72e6ffe8737d9b nmdc:dobj-11-s70dp657 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4r1p32.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 nmdc:dobj-11-fphzrg29 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-3j4r1p32.1/nmdc_wfmgas-11-3j4r1p32.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 nmdc:dobj-11-2w4cp713 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:929283826cba31853761db726c97ef41 nmdc:wfmgas-11-40gmqe55.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4r1p32.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:929283826cba31853761db726c97ef41 nmdc:wfmgas-11-3j4r1p32.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-0qq1wf68 -INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-hf4xp029.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1 +INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jd9kxx38.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fe4f56c3c6533127e224c03f2691de4 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fe4f56c3c6533127e224c03f2691de4 nmdc:dobj-11-hyq0nm87 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fe4f56c3c6533127e224c03f2691de4 nmdc:dobj-11-5zvgm590 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a4c879329a04e75907617d0ac606fbf -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a4c879329a04e75907617d0ac606fbf nmdc:dobj-11-9m3vqq93 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a4c879329a04e75907617d0ac606fbf nmdc:dobj-11-bxtrg860 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26e7af846b354ab6f9b0d47037b6ed5d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26e7af846b354ab6f9b0d47037b6ed5d nmdc:dobj-11-jm16a975 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26e7af846b354ab6f9b0d47037b6ed5d nmdc:dobj-11-eq8azx76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b362a17555a555ca280dc1a774d8257 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b362a17555a555ca280dc1a774d8257 nmdc:dobj-11-1gt8fd94 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b362a17555a555ca280dc1a774d8257 nmdc:dobj-11-awa7tc20 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 nmdc:dobj-11-0feerf41 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 nmdc:dobj-11-0r8m9t87 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f6bac3ea3a4b8bab45b2f089c53b779f -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f6bac3ea3a4b8bab45b2f089c53b779f nmdc:dobj-11-tdffe742 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f6bac3ea3a4b8bab45b2f089c53b779f nmdc:dobj-11-k8dcvt36 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b6d41063251b5b35d3aa554d3f77f9c9 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6d41063251b5b35d3aa554d3f77f9c9 nmdc:dobj-11-mnwnn493 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6d41063251b5b35d3aa554d3f77f9c9 nmdc:dobj-11-b6s7e674 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eca839aa68f3f38e3cdf969dc6f13929 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eca839aa68f3f38e3cdf969dc6f13929 nmdc:dobj-11-tqyq7a39 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eca839aa68f3f38e3cdf969dc6f13929 nmdc:dobj-11-vy34q809 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0625ec7747b047894773ecfdd88f49da -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0625ec7747b047894773ecfdd88f49da nmdc:dobj-11-22js7m47 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-jd9kxx38.1/nmdc_wfrbt-11-jd9kxx38.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0625ec7747b047894773ecfdd88f49da nmdc:dobj-11-srfmw130 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:929283826cba31853761db726c97ef41 nmdc:wfrbt-11-hf4xp029.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jd9kxx38.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:929283826cba31853761db726c97ef41 nmdc:wfrbt-11-jd9kxx38.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-0qq1wf68 INFO:root:omics_processing_id: nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6596e0c6c077b864048f00a68ab6c78 nmdc:dobj-11-byebvz84 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6596e0c6c077b864048f00a68ab6c78 nmdc:dobj-11-rz7pjz12 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5v7dy272 -INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8s99sx20.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-8s99sx20.1 +INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-m3jqbk80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-m3jqbk80.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41e58af45c2187a61af5c75b1f0971fa -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-8s99sx20.1/nmdc_wfrqc-11-8s99sx20.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41e58af45c2187a61af5c75b1f0971fa nmdc:dobj-11-3dpye104 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-m3jqbk80.1/nmdc_wfrqc-11-m3jqbk80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41e58af45c2187a61af5c75b1f0971fa nmdc:dobj-11-2j545s17 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8s99sx20.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-m3jqbk80.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d3dafccb690b86e43f9de986fa067f1 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-8s99sx20.1/nmdc_wfrqc-11-8s99sx20.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d3dafccb690b86e43f9de986fa067f1 nmdc:dobj-11-185w9x78 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-m3jqbk80.1/nmdc_wfrqc-11-m3jqbk80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d3dafccb690b86e43f9de986fa067f1 nmdc:dobj-11-t5k2yz27 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8s99sx20.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfrqc-11-8s99sx20.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-m3jqbk80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfrqc-11-m3jqbk80.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5v7dy272 -INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yxc9p229.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1 +INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-eqp4ev47.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-eqp4ev47.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0e3c146dfccbce97dbe291b8a1340cd -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0e3c146dfccbce97dbe291b8a1340cd nmdc:dobj-11-7khm3v17 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-eqp4ev47.1/nmdc_wfmgas-11-eqp4ev47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0e3c146dfccbce97dbe291b8a1340cd nmdc:dobj-11-xm676y85 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eqp4ev47.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a7a83584cf2763994ff0eff2423bb4fd -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7a83584cf2763994ff0eff2423bb4fd nmdc:dobj-11-jv3qfc15 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-eqp4ev47.1/nmdc_wfmgas-11-eqp4ev47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7a83584cf2763994ff0eff2423bb4fd nmdc:dobj-11-pqw2wj08 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eqp4ev47.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:255f27df330491e4fdf0d8ac231c26b5 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:255f27df330491e4fdf0d8ac231c26b5 nmdc:dobj-11-7hhfwa66 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-eqp4ev47.1/nmdc_wfmgas-11-eqp4ev47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:255f27df330491e4fdf0d8ac231c26b5 nmdc:dobj-11-eyn1jc14 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eqp4ev47.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ed7caaf9ef411a27133ec7867fd0a76 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ed7caaf9ef411a27133ec7867fd0a76 nmdc:dobj-11-va4gcv60 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-eqp4ev47.1/nmdc_wfmgas-11-eqp4ev47.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ed7caaf9ef411a27133ec7867fd0a76 nmdc:dobj-11-sv41vt56 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eqp4ev47.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e4887ca5a5d000d65beade012be35e7 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e4887ca5a5d000d65beade012be35e7 nmdc:dobj-11-j434fx61 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-eqp4ev47.1/nmdc_wfmgas-11-eqp4ev47.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e4887ca5a5d000d65beade012be35e7 nmdc:dobj-11-wdpw7x96 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfmgas-11-yxc9p229.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eqp4ev47.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfmgas-11-eqp4ev47.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-5v7dy272 -INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-7njf2e10.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1 +INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-djgpdq06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:892782dc631a5581fcaf93bd5ccc473d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:892782dc631a5581fcaf93bd5ccc473d nmdc:dobj-11-ctkrhn92 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:892782dc631a5581fcaf93bd5ccc473d nmdc:dobj-11-3s9pdx06 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bf41e7e39784afaaac797359815c2f81 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf41e7e39784afaaac797359815c2f81 nmdc:dobj-11-1jwy4q53 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf41e7e39784afaaac797359815c2f81 nmdc:dobj-11-hmhcg479 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:caf1b3c45796d80e82846e2363001a2b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:caf1b3c45796d80e82846e2363001a2b nmdc:dobj-11-kmemvw27 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:caf1b3c45796d80e82846e2363001a2b nmdc:dobj-11-4e42vf35 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74094920c294e1906a83c34654619266 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74094920c294e1906a83c34654619266 nmdc:dobj-11-dqnmhb65 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74094920c294e1906a83c34654619266 nmdc:dobj-11-m3wdc843 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf nmdc:dobj-11-7vqzdk98 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf nmdc:dobj-11-x23a5w57 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 nmdc:dobj-11-6yxr6c55 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 nmdc:dobj-11-6j1ja547 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d034667d4d21b468a27705a25c77df36 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d034667d4d21b468a27705a25c77df36 nmdc:dobj-11-fqkaad24 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d034667d4d21b468a27705a25c77df36 nmdc:dobj-11-6s5w3h26 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:373a1483931f9805a09a8e492f9a2392 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:373a1483931f9805a09a8e492f9a2392 nmdc:dobj-11-t8qnrr36 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:373a1483931f9805a09a8e492f9a2392 nmdc:dobj-11-e9rrjc29 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 nmdc:dobj-11-4cpfch80 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-djgpdq06.1/nmdc_wfrbt-11-djgpdq06.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 nmdc:dobj-11-3bx7vh35 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfrbt-11-7njf2e10.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-djgpdq06.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfrbt-11-djgpdq06.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5v7dy272 INFO:root:omics_processing_id: nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3900b15ebaa5ecba247164c7165d2f38 nmdc:dobj-11-sy96px30 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3900b15ebaa5ecba247164c7165d2f38 nmdc:dobj-11-m0n9dm41 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-qg3vxj76 -INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5eajga08.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-5eajga08.1 +INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-n9s87e81.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-n9s87e81.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1978062c63a0079d779f0f1a820296e7 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-5eajga08.1/nmdc_wfrqc-11-5eajga08.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1978062c63a0079d779f0f1a820296e7 nmdc:dobj-11-ewvb7m77 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-n9s87e81.1/nmdc_wfrqc-11-n9s87e81.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1978062c63a0079d779f0f1a820296e7 nmdc:dobj-11-8r7t9254 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5eajga08.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n9s87e81.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8010e289e2cbcb88dc55cae1c5082851 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-5eajga08.1/nmdc_wfrqc-11-5eajga08.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8010e289e2cbcb88dc55cae1c5082851 nmdc:dobj-11-r1t59c15 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-n9s87e81.1/nmdc_wfrqc-11-n9s87e81.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8010e289e2cbcb88dc55cae1c5082851 nmdc:dobj-11-y6geqy57 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5eajga08.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfrqc-11-5eajga08.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n9s87e81.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfrqc-11-n9s87e81.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-qg3vxj76 -INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7mgfza58.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1 +INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-pgefnr60.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-pgefnr60.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebe16a3e4d650652f0a39e930872a158 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebe16a3e4d650652f0a39e930872a158 nmdc:dobj-11-0gnm2519 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-pgefnr60.1/nmdc_wfmgas-11-pgefnr60.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebe16a3e4d650652f0a39e930872a158 nmdc:dobj-11-0avde933 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pgefnr60.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e986afe1a3c118ea3c98e4915839776a -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e986afe1a3c118ea3c98e4915839776a nmdc:dobj-11-11e5qf10 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-pgefnr60.1/nmdc_wfmgas-11-pgefnr60.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e986afe1a3c118ea3c98e4915839776a nmdc:dobj-11-cgnmkk66 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pgefnr60.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b52a8ce01e5e3e6ed03ab22e2d7a2bce -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b52a8ce01e5e3e6ed03ab22e2d7a2bce nmdc:dobj-11-skc5t546 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-pgefnr60.1/nmdc_wfmgas-11-pgefnr60.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b52a8ce01e5e3e6ed03ab22e2d7a2bce nmdc:dobj-11-qw5aes67 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pgefnr60.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5475a070df52f1702058521b8ebfdd81 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5475a070df52f1702058521b8ebfdd81 nmdc:dobj-11-694fv113 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-pgefnr60.1/nmdc_wfmgas-11-pgefnr60.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5475a070df52f1702058521b8ebfdd81 nmdc:dobj-11-jtjkfy79 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pgefnr60.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:555814c0b6ca44e02f29d8bcc90b41bc -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:555814c0b6ca44e02f29d8bcc90b41bc nmdc:dobj-11-xedxhg67 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-pgefnr60.1/nmdc_wfmgas-11-pgefnr60.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:555814c0b6ca44e02f29d8bcc90b41bc nmdc:dobj-11-ejm7ja83 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfmgas-11-7mgfza58.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pgefnr60.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfmgas-11-pgefnr60.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-qg3vxj76 -INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-rpwjgc71.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1 +INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-q7xxg583.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29d7979ce172e99795e2ba9f5b27ee22 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29d7979ce172e99795e2ba9f5b27ee22 nmdc:dobj-11-ek8xpg10 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29d7979ce172e99795e2ba9f5b27ee22 nmdc:dobj-11-e8zcw572 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:406855169336718091ad1e568e6fb418 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:406855169336718091ad1e568e6fb418 nmdc:dobj-11-d18vrn57 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:406855169336718091ad1e568e6fb418 nmdc:dobj-11-0nbfrq70 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bdeb595483c185c42c5245d53f2a0c7 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bdeb595483c185c42c5245d53f2a0c7 nmdc:dobj-11-mmc7h068 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bdeb595483c185c42c5245d53f2a0c7 nmdc:dobj-11-e334sk95 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 nmdc:dobj-11-5kf55s07 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 nmdc:dobj-11-68856f58 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:640b149083a469e3075770a03c5d20e0 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:640b149083a469e3075770a03c5d20e0 nmdc:dobj-11-0b76xt33 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:640b149083a469e3075770a03c5d20e0 nmdc:dobj-11-y3kkbn60 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ed5a5a06a47e85f77df6dab7a91039b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ed5a5a06a47e85f77df6dab7a91039b nmdc:dobj-11-e6g4te80 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ed5a5a06a47e85f77df6dab7a91039b nmdc:dobj-11-vkdnfn80 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d52e6df0a0986f444253392961e943d4 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d52e6df0a0986f444253392961e943d4 nmdc:dobj-11-g73s1x71 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d52e6df0a0986f444253392961e943d4 nmdc:dobj-11-bx1ygp24 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c67283d3ccf71f511b8460b8c1cc692a -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67283d3ccf71f511b8460b8c1cc692a nmdc:dobj-11-fftmye10 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67283d3ccf71f511b8460b8c1cc692a nmdc:dobj-11-0yzvmv95 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5108d260ae1b95d58f3706d35ccfb83f -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5108d260ae1b95d58f3706d35ccfb83f nmdc:dobj-11-1917kf97 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-q7xxg583.1/nmdc_wfrbt-11-q7xxg583.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5108d260ae1b95d58f3706d35ccfb83f nmdc:dobj-11-4n538v37 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfrbt-11-rpwjgc71.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q7xxg583.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfrbt-11-q7xxg583.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-qg3vxj76 INFO:root:omics_processing_id: nmdc:omprc-11-2bmkj745 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2b267f00e22a74e94e6dd75fe0531f0 nmdc:dobj-11-zbzrzp68 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2b267f00e22a74e94e6dd75fe0531f0 nmdc:dobj-11-my6j1967 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-2bmkj745 -INFO:root:New activity id created for nmdc:omprc-11-2bmkj745 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-twbygm96.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-twbygm96.1 +INFO:root:New activity id created for nmdc:omprc-11-2bmkj745 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-s8g53549.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-s8g53549.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8489d99afe00144c49dff91e65525ed8 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-twbygm96.1/nmdc_wfrqc-11-twbygm96.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8489d99afe00144c49dff91e65525ed8 nmdc:dobj-11-n9rxdv84 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-s8g53549.1/nmdc_wfrqc-11-s8g53549.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8489d99afe00144c49dff91e65525ed8 nmdc:dobj-11-3d74x029 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-2bmkj745 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-twbygm96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-s8g53549.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5055fb882d43f52d949a704b5233660b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-twbygm96.1/nmdc_wfrqc-11-twbygm96.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5055fb882d43f52d949a704b5233660b nmdc:dobj-11-j4x99251 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-s8g53549.1/nmdc_wfrqc-11-s8g53549.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5055fb882d43f52d949a704b5233660b nmdc:dobj-11-znm89n24 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-2bmkj745 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-twbygm96.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ce4f08538d6f705abc1505ed9cc8493b nmdc:wfrqc-11-twbygm96.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-s8g53549.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ce4f08538d6f705abc1505ed9cc8493b nmdc:wfrqc-11-s8g53549.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-2bmkj745 -INFO:root:New activity id created for nmdc:omprc-11-2bmkj745 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4hs8k180.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1 +INFO:root:New activity id created for nmdc:omprc-11-2bmkj745 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-1gb7e745.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-1gb7e745.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f317d8792266dcba89f37e43a9270484 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f317d8792266dcba89f37e43a9270484 nmdc:dobj-11-af1fh827 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-1gb7e745.1/nmdc_wfmgas-11-1gb7e745.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f317d8792266dcba89f37e43a9270484 nmdc:dobj-11-1kx3w482 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-2bmkj745 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1gb7e745.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77e2eafe0f2c9428c9663454add7cfc0 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77e2eafe0f2c9428c9663454add7cfc0 nmdc:dobj-11-7tkyrd91 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-1gb7e745.1/nmdc_wfmgas-11-1gb7e745.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77e2eafe0f2c9428c9663454add7cfc0 nmdc:dobj-11-d61m5e46 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-2bmkj745 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1gb7e745.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66059c8a9b877afa93d5c74bfc19a9b3 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66059c8a9b877afa93d5c74bfc19a9b3 nmdc:dobj-11-n6ya2v37 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-1gb7e745.1/nmdc_wfmgas-11-1gb7e745.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66059c8a9b877afa93d5c74bfc19a9b3 nmdc:dobj-11-xwm55237 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-2bmkj745 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1gb7e745.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d11b47e57ad17ed8afbce02429204fb -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d11b47e57ad17ed8afbce02429204fb nmdc:dobj-11-3k1ev303 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-1gb7e745.1/nmdc_wfmgas-11-1gb7e745.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d11b47e57ad17ed8afbce02429204fb nmdc:dobj-11-1zcqc166 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-2bmkj745 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1gb7e745.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52bcd468266f72732c5f7b07e3e0d353 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52bcd468266f72732c5f7b07e3e0d353 nmdc:dobj-11-cj3jzc94 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-1gb7e745.1/nmdc_wfmgas-11-1gb7e745.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52bcd468266f72732c5f7b07e3e0d353 nmdc:dobj-11-es0qwm48 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-2bmkj745 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ce4f08538d6f705abc1505ed9cc8493b nmdc:wfmgas-11-4hs8k180.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1gb7e745.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ce4f08538d6f705abc1505ed9cc8493b nmdc:wfmgas-11-1gb7e745.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-2bmkj745 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-2bmkj745 INFO:root:omics_processing_id: nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a37ea20e51282596cf799605d6e912c nmdc:dobj-11-82yj8e41 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a37ea20e51282596cf799605d6e912c nmdc:dobj-11-hjqy4433 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-s8v93g59 -INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cgtexk57.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-cgtexk57.1 +INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-kfvt4e60.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-kfvt4e60.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ecbf0512652b4a76930b42338fe069a6 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-cgtexk57.1/nmdc_wfrqc-11-cgtexk57.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ecbf0512652b4a76930b42338fe069a6 nmdc:dobj-11-n5wtf165 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-kfvt4e60.1/nmdc_wfrqc-11-kfvt4e60.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ecbf0512652b4a76930b42338fe069a6 nmdc:dobj-11-hajh3v03 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cgtexk57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kfvt4e60.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fac6c0329d3d2dbecb4f4537de15c65b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-cgtexk57.1/nmdc_wfrqc-11-cgtexk57.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fac6c0329d3d2dbecb4f4537de15c65b nmdc:dobj-11-n4q5q025 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-kfvt4e60.1/nmdc_wfrqc-11-kfvt4e60.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fac6c0329d3d2dbecb4f4537de15c65b nmdc:dobj-11-bd2dgc46 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cgtexk57.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfrqc-11-cgtexk57.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kfvt4e60.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfrqc-11-kfvt4e60.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-s8v93g59 -INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-00w5aw47.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1 +INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-h2ejr841.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-h2ejr841.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fa9ad423eab6ca57746d536c3da9d9c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa9ad423eab6ca57746d536c3da9d9c nmdc:dobj-11-d7ymcr19 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-h2ejr841.1/nmdc_wfmgas-11-h2ejr841.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa9ad423eab6ca57746d536c3da9d9c nmdc:dobj-11-ej1mk571 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h2ejr841.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:774ba656ecf709dc459f44979b1b4f65 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:774ba656ecf709dc459f44979b1b4f65 nmdc:dobj-11-zbk1mq28 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-h2ejr841.1/nmdc_wfmgas-11-h2ejr841.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:774ba656ecf709dc459f44979b1b4f65 nmdc:dobj-11-3tkftg65 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h2ejr841.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:595450b1e3ef7af7796b1c8d3c42e37c -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:595450b1e3ef7af7796b1c8d3c42e37c nmdc:dobj-11-7mq3da34 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-h2ejr841.1/nmdc_wfmgas-11-h2ejr841.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:595450b1e3ef7af7796b1c8d3c42e37c nmdc:dobj-11-m54v7t70 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h2ejr841.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1eb1559a69b20af687e645bd94e28602 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1eb1559a69b20af687e645bd94e28602 nmdc:dobj-11-c11gax59 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-h2ejr841.1/nmdc_wfmgas-11-h2ejr841.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1eb1559a69b20af687e645bd94e28602 nmdc:dobj-11-c6jmc910 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h2ejr841.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4daeb929d6c8b2a7068455a5484a14aa -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4daeb929d6c8b2a7068455a5484a14aa nmdc:dobj-11-67at7x39 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-h2ejr841.1/nmdc_wfmgas-11-h2ejr841.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4daeb929d6c8b2a7068455a5484a14aa nmdc:dobj-11-3fvby134 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfmgas-11-00w5aw47.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h2ejr841.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfmgas-11-h2ejr841.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-s8v93g59 -INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qs1k3m03.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1 +INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2xszkp40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa219ce5583bc97f9e9bf1df90f0966e -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa219ce5583bc97f9e9bf1df90f0966e nmdc:dobj-11-rrxey108 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa219ce5583bc97f9e9bf1df90f0966e nmdc:dobj-11-gdpp2s33 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80ec1cca49e6f46f5441f778d39334a7 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80ec1cca49e6f46f5441f778d39334a7 nmdc:dobj-11-y9rzvh52 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80ec1cca49e6f46f5441f778d39334a7 nmdc:dobj-11-m8np4364 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f8868d11a879f275d4d6143bf7cd1c65 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8868d11a879f275d4d6143bf7cd1c65 nmdc:dobj-11-a0ymsb82 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8868d11a879f275d4d6143bf7cd1c65 nmdc:dobj-11-zmzzbw92 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d9289f68e03bcf582229ef6a5ea0a67 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d9289f68e03bcf582229ef6a5ea0a67 nmdc:dobj-11-j8692s19 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d9289f68e03bcf582229ef6a5ea0a67 nmdc:dobj-11-k856ab22 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13fcb7a41f5d14f84ecdafee883857ca -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13fcb7a41f5d14f84ecdafee883857ca nmdc:dobj-11-yjpxh632 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13fcb7a41f5d14f84ecdafee883857ca nmdc:dobj-11-90v30639 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61d1f1838d983c1d5ac232440460893c -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61d1f1838d983c1d5ac232440460893c nmdc:dobj-11-8ez4yv93 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61d1f1838d983c1d5ac232440460893c nmdc:dobj-11-6e5hws67 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1dd5ec7ab305465deb9f38689a320709 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1dd5ec7ab305465deb9f38689a320709 nmdc:dobj-11-w4teyd97 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1dd5ec7ab305465deb9f38689a320709 nmdc:dobj-11-7hmw5845 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32787a13d8fe71997023f82eee110dbd -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32787a13d8fe71997023f82eee110dbd nmdc:dobj-11-f8cs4v57 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32787a13d8fe71997023f82eee110dbd nmdc:dobj-11-5e9xc526 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 nmdc:dobj-11-y28h0f09 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-2xszkp40.1/nmdc_wfrbt-11-2xszkp40.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 nmdc:dobj-11-x01kqd45 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfrbt-11-qs1k3m03.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xszkp40.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfrbt-11-2xszkp40.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-s8v93g59 INFO:root:omics_processing_id: nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a68418156612ccea5ffa4c2d9b6a6114 nmdc:dobj-11-9yj9sw37 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a68418156612ccea5ffa4c2d9b6a6114 nmdc:dobj-11-11f4gx80 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-3q02ny85 -INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-nzshma95.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-nzshma95.1 +INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7xvhaz82.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-7xvhaz82.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e4cc4c19106a72aaac4c83cf4a2a286 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-nzshma95.1/nmdc_wfrqc-11-nzshma95.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e4cc4c19106a72aaac4c83cf4a2a286 nmdc:dobj-11-z2514j15 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-7xvhaz82.1/nmdc_wfrqc-11-7xvhaz82.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e4cc4c19106a72aaac4c83cf4a2a286 nmdc:dobj-11-se7kra06 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-nzshma95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7xvhaz82.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7b70f32c6453eeaa76148503d947956 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-nzshma95.1/nmdc_wfrqc-11-nzshma95.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7b70f32c6453eeaa76148503d947956 nmdc:dobj-11-b6bmpn85 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-7xvhaz82.1/nmdc_wfrqc-11-7xvhaz82.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7b70f32c6453eeaa76148503d947956 nmdc:dobj-11-pezq6r91 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-nzshma95.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfrqc-11-nzshma95.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7xvhaz82.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfrqc-11-7xvhaz82.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-3q02ny85 -INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jc0jq395.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1 +INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-acsdvn23.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-acsdvn23.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:290dacce7b0033b70ac3d9ee81ebe834 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:290dacce7b0033b70ac3d9ee81ebe834 nmdc:dobj-11-vn9cky02 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-acsdvn23.1/nmdc_wfmgas-11-acsdvn23.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:290dacce7b0033b70ac3d9ee81ebe834 nmdc:dobj-11-b31tfj84 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-acsdvn23.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3abff3c9b8c81420662e2191a19a49e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3abff3c9b8c81420662e2191a19a49e nmdc:dobj-11-0z0pfj11 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-acsdvn23.1/nmdc_wfmgas-11-acsdvn23.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3abff3c9b8c81420662e2191a19a49e nmdc:dobj-11-wpksev77 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-acsdvn23.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 nmdc:dobj-11-t2c0zq52 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-acsdvn23.1/nmdc_wfmgas-11-acsdvn23.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 nmdc:dobj-11-ea1s6474 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-acsdvn23.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93d97ed02fab960bdaa49abd9ab61861 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93d97ed02fab960bdaa49abd9ab61861 nmdc:dobj-11-5372j728 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-acsdvn23.1/nmdc_wfmgas-11-acsdvn23.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93d97ed02fab960bdaa49abd9ab61861 nmdc:dobj-11-xy2w2j05 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-acsdvn23.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75ad27df82034cd6dc438d12a13127d4 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75ad27df82034cd6dc438d12a13127d4 nmdc:dobj-11-r5vxxm82 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-acsdvn23.1/nmdc_wfmgas-11-acsdvn23.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75ad27df82034cd6dc438d12a13127d4 nmdc:dobj-11-32804a98 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfmgas-11-jc0jq395.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-acsdvn23.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b3bbea86a89750d04e296d2ca7516a0 nmdc:dobj-11-a0qwxe52 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-5xsw3594.1/nmdc_wfrbt-11-5xsw3594.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b3bbea86a89750d04e296d2ca7516a0 nmdc:dobj-11-rvsn6e93 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xsw3594.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:edf382163c1e19d7e44a5e76b78ed37d -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:edf382163c1e19d7e44a5e76b78ed37d nmdc:dobj-11-qkzdhe19 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-5xsw3594.1/nmdc_wfrbt-11-5xsw3594.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:edf382163c1e19d7e44a5e76b78ed37d nmdc:dobj-11-vckp9037 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xsw3594.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fbea941838df056f23d2f5e5e623fa8 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fbea941838df056f23d2f5e5e623fa8 nmdc:dobj-11-xezgy490 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-5xsw3594.1/nmdc_wfrbt-11-5xsw3594.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fbea941838df056f23d2f5e5e623fa8 nmdc:dobj-11-j56bnj80 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xsw3594.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45a7b29cf3507c83dd6cb7391ae325a1 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45a7b29cf3507c83dd6cb7391ae325a1 nmdc:dobj-11-w095hm93 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-5xsw3594.1/nmdc_wfrbt-11-5xsw3594.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45a7b29cf3507c83dd6cb7391ae325a1 nmdc:dobj-11-d138ac65 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xsw3594.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:749a526680822969a72c2bdefc934870 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:749a526680822969a72c2bdefc934870 nmdc:dobj-11-mvd1f384 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-5xsw3594.1/nmdc_wfrbt-11-5xsw3594.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:749a526680822969a72c2bdefc934870 nmdc:dobj-11-kjq7rr45 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xsw3594.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3302d9463d73c2f5b56077476d3072d4 -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3b9b92b02d84dcaa6c1c2f9da9aa5e2 nmdc:dobj-11-4qzh3183 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-5xsw3594.1/nmdc_wfrbt-11-5xsw3594.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3b9b92b02d84dcaa6c1c2f9da9aa5e2 nmdc:dobj-11-gvrnyb24 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xsw3594.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18b9a6ae7e24472c382475d68e148242 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18b9a6ae7e24472c382475d68e148242 nmdc:dobj-11-7e4cm314 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-5xsw3594.1/nmdc_wfrbt-11-5xsw3594.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18b9a6ae7e24472c382475d68e148242 nmdc:dobj-11-5thfhf60 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5xsw3594.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fa137a7216d90e9b548ad023fde787a -INFO:root:New file 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfmgas-11-nh72cw94.1/nmdc_wfmgas-11-nh72cw94.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98501ed7ca9dcaa374798de03ddee2d6 nmdc:dobj-11-jmdrff25 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfmgas-11-734pm832.1/nmdc_wfmgas-11-734pm832.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98501ed7ca9dcaa374798de03ddee2d6 nmdc:dobj-11-yr95q030 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nh72cw94.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-734pm832.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd5b242cdd8c14516f87f7d5ad6c75e3 -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94744351cc7d750b4c9c8e97c73b3d4 nmdc:dobj-11-th007r77 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-0e34g928.1/nmdc_wfrbt-11-0e34g928.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94744351cc7d750b4c9c8e97c73b3d4 nmdc:dobj-11-e80yr537 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0e34g928.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51543082d5583142714c723f25c0ae59 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51543082d5583142714c723f25c0ae59 nmdc:dobj-11-zpqs9n33 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-0e34g928.1/nmdc_wfrbt-11-0e34g928.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51543082d5583142714c723f25c0ae59 nmdc:dobj-11-qzjbsk97 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0e34g928.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9f07e15d6c51bfe3c390a0287fc64c6 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eac79277f377bf43c195f0c79e7845a8 nmdc:dobj-11-xkpqrn69 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-0e34g928.1/nmdc_wfrbt-11-0e34g928.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eac79277f377bf43c195f0c79e7845a8 nmdc:dobj-11-d2fsfs41 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0e34g928.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd142d29a7556780b70685ff50e64ddd -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd142d29a7556780b70685ff50e64ddd nmdc:dobj-11-8ghr0y96 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-0e34g928.1/nmdc_wfrbt-11-0e34g928.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd142d29a7556780b70685ff50e64ddd nmdc:dobj-11-5rajws86 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0e34g928.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1daaf5390937d482524357e452c0b284 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1daaf5390937d482524357e452c0b284 nmdc:dobj-11-420hw949 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-0e34g928.1/nmdc_wfrbt-11-0e34g928.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1daaf5390937d482524357e452c0b284 nmdc:dobj-11-tnaw1b19 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0e34g928.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:782c9ce36f94f7d5e8da1f080a844cae -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:782c9ce36f94f7d5e8da1f080a844cae nmdc:dobj-11-7pywzy67 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-0e34g928.1/nmdc_wfrbt-11-0e34g928.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:782c9ce36f94f7d5e8da1f080a844cae nmdc:dobj-11-crfak790 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0e34g928.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5eb6a360229b07828652233cdf79b789 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5eb6a360229b07828652233cdf79b789 nmdc:dobj-11-9et7ws26 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-0e34g928.1/nmdc_wfrbt-11-0e34g928.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5eb6a360229b07828652233cdf79b789 nmdc:dobj-11-cvsbx736 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0e34g928.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9014a78668556a1203cf95cca1cfb1c -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9014a78668556a1203cf95cca1cfb1c nmdc:dobj-11-jgczy327 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-0e34g928.1/nmdc_wfrbt-11-0e34g928.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9014a78668556a1203cf95cca1cfb1c nmdc:dobj-11-fktaze07 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f881bb4b70fb1271442006a03252de42 nmdc:wfrbt-11-62rape45.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0e34g928.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f881bb4b70fb1271442006a03252de42 nmdc:wfrbt-11-0e34g928.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-31w8s533 INFO:root:omics_processing_id: nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2437e48c81f26729595351c727f94b0b nmdc:dobj-11-ynsgf807 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2437e48c81f26729595351c727f94b0b nmdc:dobj-11-mfjqdg69 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-pjs63190 -INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qdgsx531.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-qdgsx531.1 +INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vyt2zk95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-vyt2zk95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc0272c1e6efdd2134e32d05081af9c6 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-qdgsx531.1/nmdc_wfrqc-11-qdgsx531.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc0272c1e6efdd2134e32d05081af9c6 nmdc:dobj-11-38d5fp07 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-vyt2zk95.1/nmdc_wfrqc-11-vyt2zk95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc0272c1e6efdd2134e32d05081af9c6 nmdc:dobj-11-d9am8329 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qdgsx531.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vyt2zk95.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ffb83977e0251de1215c15725b707af -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-qdgsx531.1/nmdc_wfrqc-11-qdgsx531.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ffb83977e0251de1215c15725b707af nmdc:dobj-11-fgp8vq41 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-vyt2zk95.1/nmdc_wfrqc-11-vyt2zk95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ffb83977e0251de1215c15725b707af nmdc:dobj-11-pf1fbs42 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qdgsx531.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfrqc-11-qdgsx531.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vyt2zk95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfrqc-11-vyt2zk95.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-pjs63190 -INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-kc7nbd48.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1 +INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rxmbv306.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-rxmbv306.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea286f9c66a89fd51e43db2aefa7c6c6 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea286f9c66a89fd51e43db2aefa7c6c6 nmdc:dobj-11-cv5xgq53 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-rxmbv306.1/nmdc_wfmgas-11-rxmbv306.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea286f9c66a89fd51e43db2aefa7c6c6 nmdc:dobj-11-32tw8p91 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxmbv306.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d0b930e87f60cc176d4df3eee15d3d8 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d0b930e87f60cc176d4df3eee15d3d8 nmdc:dobj-11-1624ka27 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-rxmbv306.1/nmdc_wfmgas-11-rxmbv306.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d0b930e87f60cc176d4df3eee15d3d8 nmdc:dobj-11-2rcemw31 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxmbv306.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:719666ff80b27a20d42663db3a0a45da -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:719666ff80b27a20d42663db3a0a45da nmdc:dobj-11-n5tfw203 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-rxmbv306.1/nmdc_wfmgas-11-rxmbv306.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:719666ff80b27a20d42663db3a0a45da nmdc:dobj-11-xpev3e02 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxmbv306.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b701b1436f30f504c50c4effdceb5904 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b701b1436f30f504c50c4effdceb5904 nmdc:dobj-11-19eqfk34 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-rxmbv306.1/nmdc_wfmgas-11-rxmbv306.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b701b1436f30f504c50c4effdceb5904 nmdc:dobj-11-5x74t332 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxmbv306.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3f1be6f767137fa782d673e325d8c31 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3f1be6f767137fa782d673e325d8c31 nmdc:dobj-11-jpwq5j69 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-rxmbv306.1/nmdc_wfmgas-11-rxmbv306.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3f1be6f767137fa782d673e325d8c31 nmdc:dobj-11-s267h389 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfmgas-11-kc7nbd48.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxmbv306.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfmgas-11-rxmbv306.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-pjs63190 -INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ts7ntd65.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1 +INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1zm4tq32.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 nmdc:dobj-11-zgwkvd67 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 nmdc:dobj-11-65erb512 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41c4bbd0be4113dffbb442ab0f3e309b -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41c4bbd0be4113dffbb442ab0f3e309b nmdc:dobj-11-fambg195 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41c4bbd0be4113dffbb442ab0f3e309b nmdc:dobj-11-xtb71t60 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e9bf0f6d2656616f08d44ea74d3037f3 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9bf0f6d2656616f08d44ea74d3037f3 nmdc:dobj-11-vzyqvr73 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9bf0f6d2656616f08d44ea74d3037f3 nmdc:dobj-11-9efmpq42 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62dfa71b652641a0ff8b3df2a6b888bb -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62dfa71b652641a0ff8b3df2a6b888bb nmdc:dobj-11-mva7b604 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62dfa71b652641a0ff8b3df2a6b888bb nmdc:dobj-11-x0s4x615 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2a5c750201b5f5f5f7a14038aec540e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2a5c750201b5f5f5f7a14038aec540e nmdc:dobj-11-9pn5b285 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2a5c750201b5f5f5f7a14038aec540e nmdc:dobj-11-kt62z939 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce nmdc:dobj-11-hyhxc645 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce nmdc:dobj-11-hprpzp23 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fec6a6cd5c7c52b4a925bab8656402e9 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fec6a6cd5c7c52b4a925bab8656402e9 nmdc:dobj-11-dtj37f59 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fec6a6cd5c7c52b4a925bab8656402e9 nmdc:dobj-11-5kwbrs47 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b6a54c1c9528598d4b7271280fb3a62 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b6a54c1c9528598d4b7271280fb3a62 nmdc:dobj-11-va6aea29 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b6a54c1c9528598d4b7271280fb3a62 nmdc:dobj-11-g5apxm56 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 nmdc:dobj-11-xjvrk253 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-1zm4tq32.1/nmdc_wfrbt-11-1zm4tq32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 nmdc:dobj-11-5vpg9g42 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfrbt-11-ts7ntd65.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zm4tq32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfrbt-11-1zm4tq32.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-pjs63190 INFO:root:omics_processing_id: nmdc:omprc-11-h63w0665 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:989711381573525c3c32f77fb8b4bcf7 nmdc:dobj-11-xq4x3h81 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:989711381573525c3c32f77fb8b4bcf7 nmdc:dobj-11-8pw13b03 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-h63w0665 -INFO:root:New activity id created for nmdc:omprc-11-h63w0665 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9ndv5j30.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-9ndv5j30.1 +INFO:root:New activity id created for nmdc:omprc-11-h63w0665 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-1y63x886.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-1y63x886.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3516d985a9c9d91a8990c3ee286a30c7 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-9ndv5j30.1/nmdc_wfrqc-11-9ndv5j30.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3516d985a9c9d91a8990c3ee286a30c7 nmdc:dobj-11-y3wbm168 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-1y63x886.1/nmdc_wfrqc-11-1y63x886.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3516d985a9c9d91a8990c3ee286a30c7 nmdc:dobj-11-sdny6271 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-h63w0665 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ndv5j30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1y63x886.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60057503ef107ce2ae3fa46853481d79 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-9ndv5j30.1/nmdc_wfrqc-11-9ndv5j30.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60057503ef107ce2ae3fa46853481d79 nmdc:dobj-11-yevt4n26 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-1y63x886.1/nmdc_wfrqc-11-1y63x886.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60057503ef107ce2ae3fa46853481d79 nmdc:dobj-11-r5nnw725 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-h63w0665 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ndv5j30.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2e384ea11627508ae28658217bdfe3b3 nmdc:wfrqc-11-9ndv5j30.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1y63x886.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2e384ea11627508ae28658217bdfe3b3 nmdc:wfrqc-11-1y63x886.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-h63w0665 -INFO:root:New activity id created for nmdc:omprc-11-h63w0665 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vfb4n927.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1 +INFO:root:New activity id created for nmdc:omprc-11-h63w0665 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-c4grm780.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-c4grm780.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c66004718621b2127afcba96ee230ddf -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c66004718621b2127afcba96ee230ddf nmdc:dobj-11-qqs4rh12 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-c4grm780.1/nmdc_wfmgas-11-c4grm780.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c66004718621b2127afcba96ee230ddf nmdc:dobj-11-pn1b8z76 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-h63w0665 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c4grm780.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e62e7b70866da3b4e75dabd7401c3b7e -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f633eb389d3e3ec440533279471a633 nmdc:dobj-11-m6rm3c73 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-c4grm780.1/nmdc_wfmgas-11-c4grm780.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f633eb389d3e3ec440533279471a633 nmdc:dobj-11-5edhs953 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-h63w0665 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c4grm780.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7bef881cb661e723a7851e58e8c18748 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bef881cb661e723a7851e58e8c18748 nmdc:dobj-11-gxw2e777 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-c4grm780.1/nmdc_wfmgas-11-c4grm780.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bef881cb661e723a7851e58e8c18748 nmdc:dobj-11-1mryjr06 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-h63w0665 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c4grm780.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d2f4eac3e8138a1b6d25a1b576d5745 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d2f4eac3e8138a1b6d25a1b576d5745 nmdc:dobj-11-63x0bk48 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-c4grm780.1/nmdc_wfmgas-11-c4grm780.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d2f4eac3e8138a1b6d25a1b576d5745 nmdc:dobj-11-3qnxnq67 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-h63w0665 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:2e384ea11627508ae28658217bdfe3b3 nmdc:wfmgas-11-vfb4n927.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c4grm780.1_pairedMapped_sorted.bam 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created for nmdc:omprc-11-9mhqsm53 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-x4sbd169.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-x4sbd169.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c3a86b1ffa0fb1ede94b75ce78e6573 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-47yj2157.1/nmdc_wfrqc-11-47yj2157.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c3a86b1ffa0fb1ede94b75ce78e6573 nmdc:dobj-11-njg5ba32 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-x4sbd169.1/nmdc_wfrqc-11-x4sbd169.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c3a86b1ffa0fb1ede94b75ce78e6573 nmdc:dobj-11-mvkfgs15 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-47yj2157.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x4sbd169.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed5b50999ee0058ab9331a6ddb7fbf0a -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-47yj2157.1/nmdc_wfrqc-11-47yj2157.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed5b50999ee0058ab9331a6ddb7fbf0a nmdc:dobj-11-t8283r17 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-x4sbd169.1/nmdc_wfrqc-11-x4sbd169.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed5b50999ee0058ab9331a6ddb7fbf0a nmdc:dobj-11-8f32bs38 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-47yj2157.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfrqc-11-47yj2157.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x4sbd169.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfrqc-11-x4sbd169.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-9mhqsm53 -INFO:root:New activity id created for nmdc:omprc-11-9mhqsm53 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-892pk330.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1 +INFO:root:New activity id created for nmdc:omprc-11-9mhqsm53 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-010zas37.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-010zas37.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:173d4154bb8b27c533dc27c574ba9d9b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:173d4154bb8b27c533dc27c574ba9d9b nmdc:dobj-11-kwnf2z67 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-010zas37.1/nmdc_wfmgas-11-010zas37.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:173d4154bb8b27c533dc27c574ba9d9b nmdc:dobj-11-pf8zry57 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-892pk330.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-010zas37.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:33ff2f01caa73fd559b8d9e4eeb5928a -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33ff2f01caa73fd559b8d9e4eeb5928a nmdc:dobj-11-xw5bva96 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-010zas37.1/nmdc_wfmgas-11-010zas37.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33ff2f01caa73fd559b8d9e4eeb5928a nmdc:dobj-11-5tzp8y16 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-892pk330.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-010zas37.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c014933ebb8bec7bfce37f700dbe8618 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c014933ebb8bec7bfce37f700dbe8618 nmdc:dobj-11-jsvfnj12 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-010zas37.1/nmdc_wfmgas-11-010zas37.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c014933ebb8bec7bfce37f700dbe8618 nmdc:dobj-11-tzqx2m62 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-892pk330.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-010zas37.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f889179bcb6e0d10554668e2a6602c0 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f889179bcb6e0d10554668e2a6602c0 nmdc:dobj-11-frt4q535 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-010zas37.1/nmdc_wfmgas-11-010zas37.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f889179bcb6e0d10554668e2a6602c0 nmdc:dobj-11-hpg11410 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-892pk330.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-010zas37.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4560c4ae0d6c207d46823433078d6454 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4560c4ae0d6c207d46823433078d6454 nmdc:dobj-11-31msgq82 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-010zas37.1/nmdc_wfmgas-11-010zas37.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4560c4ae0d6c207d46823433078d6454 nmdc:dobj-11-y4ckvk74 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-892pk330.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfmgas-11-892pk330.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68d3e76cd0e9dc8f1d9e5222d9ba3e4f nmdc:dobj-11-vnjzwv47 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-dcr5ac32.1/nmdc_wfrbt-11-dcr5ac32.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68d3e76cd0e9dc8f1d9e5222d9ba3e4f nmdc:dobj-11-ew2h1s62 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcr5ac32.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52be54f58b105b1b32e97eb7e79b024e -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52be54f58b105b1b32e97eb7e79b024e nmdc:dobj-11-wbsh2k64 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-dcr5ac32.1/nmdc_wfrbt-11-dcr5ac32.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52be54f58b105b1b32e97eb7e79b024e nmdc:dobj-11-en85vy42 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcr5ac32.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12de38964eda24a7d5ec260beb1584a5 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12de38964eda24a7d5ec260beb1584a5 nmdc:dobj-11-cxbhht46 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-dcr5ac32.1/nmdc_wfrbt-11-dcr5ac32.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12de38964eda24a7d5ec260beb1584a5 nmdc:dobj-11-7x3jwr21 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcr5ac32.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92f6a01b60199cdd659291e6b69f2ca9 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92f6a01b60199cdd659291e6b69f2ca9 nmdc:dobj-11-jwvn2c52 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-dcr5ac32.1/nmdc_wfrbt-11-dcr5ac32.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92f6a01b60199cdd659291e6b69f2ca9 nmdc:dobj-11-qd7ag134 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcr5ac32.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e904b455b89d83441fd6a5d4ceec8f07 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e904b455b89d83441fd6a5d4ceec8f07 nmdc:dobj-11-4n2acq18 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-dcr5ac32.1/nmdc_wfrbt-11-dcr5ac32.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e904b455b89d83441fd6a5d4ceec8f07 nmdc:dobj-11-9rp94r61 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcr5ac32.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:225829fc2562b2b761aab02e1fdfd752 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:225829fc2562b2b761aab02e1fdfd752 nmdc:dobj-11-h62ghd11 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-dcr5ac32.1/nmdc_wfrbt-11-dcr5ac32.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:225829fc2562b2b761aab02e1fdfd752 nmdc:dobj-11-dg17ek26 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcr5ac32.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:980c2b734fe7f0949c431109ba0bc757 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:980c2b734fe7f0949c431109ba0bc757 nmdc:dobj-11-9zvs6s37 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-dcr5ac32.1/nmdc_wfrbt-11-dcr5ac32.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:980c2b734fe7f0949c431109ba0bc757 nmdc:dobj-11-gmj0tg08 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcr5ac32.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c28210f3071feeb1b190c2419ba39fd1 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28210f3071feeb1b190c2419ba39fd1 nmdc:dobj-11-qzgjm071 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-dcr5ac32.1/nmdc_wfrbt-11-dcr5ac32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28210f3071feeb1b190c2419ba39fd1 nmdc:dobj-11-a11xvy89 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfrbt-11-zqakwz80.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcr5ac32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfrbt-11-dcr5ac32.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9mhqsm53 INFO:root:omics_processing_id: nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb53962aabcda827b19e270a805dc0e1 nmdc:dobj-11-pt05r043 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb53962aabcda827b19e270a805dc0e1 nmdc:dobj-11-hhjfw404 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gcs98d33 -INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-reg6k386.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-reg6k386.1 +INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-db8sp068.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-db8sp068.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da7097d7d6673d4e0e1cf90f05af3201 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-reg6k386.1/nmdc_wfrqc-11-reg6k386.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da7097d7d6673d4e0e1cf90f05af3201 nmdc:dobj-11-79pmsg37 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-db8sp068.1/nmdc_wfrqc-11-db8sp068.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da7097d7d6673d4e0e1cf90f05af3201 nmdc:dobj-11-zqhg2623 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-reg6k386.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-db8sp068.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b889c06bb7e48bb4975ceff3a980952 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-reg6k386.1/nmdc_wfrqc-11-reg6k386.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b889c06bb7e48bb4975ceff3a980952 nmdc:dobj-11-x5pdxm09 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-db8sp068.1/nmdc_wfrqc-11-db8sp068.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b889c06bb7e48bb4975ceff3a980952 nmdc:dobj-11-c6q5x038 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-reg6k386.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfrqc-11-reg6k386.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-db8sp068.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfrqc-11-db8sp068.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gcs98d33 -INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2mft5y46.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1 +INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-cych6v68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-cych6v68.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fc371b6d4a8f79384bfd7027455d6fb -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc371b6d4a8f79384bfd7027455d6fb nmdc:dobj-11-tj5fqy31 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-cych6v68.1/nmdc_wfmgas-11-cych6v68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc371b6d4a8f79384bfd7027455d6fb nmdc:dobj-11-05987y85 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cych6v68.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 nmdc:dobj-11-0b9new18 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-cych6v68.1/nmdc_wfmgas-11-cych6v68.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 nmdc:dobj-11-szerck05 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cych6v68.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5f231e2f4737438a54110763946ae2a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5f231e2f4737438a54110763946ae2a nmdc:dobj-11-wc4ggh64 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-cych6v68.1/nmdc_wfmgas-11-cych6v68.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5f231e2f4737438a54110763946ae2a nmdc:dobj-11-r7fcd353 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cych6v68.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36aca4506415f2e7ecab46150cadc4fd -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36aca4506415f2e7ecab46150cadc4fd nmdc:dobj-11-hchcyt74 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-cych6v68.1/nmdc_wfmgas-11-cych6v68.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36aca4506415f2e7ecab46150cadc4fd nmdc:dobj-11-we66ws95 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cych6v68.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 nmdc:dobj-11-6d4bc092 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-cych6v68.1/nmdc_wfmgas-11-cych6v68.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 nmdc:dobj-11-sc12jm11 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfmgas-11-2mft5y46.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cych6v68.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfmgas-11-cych6v68.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gcs98d33 -INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-sxdxt315.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1 +INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-m1bker83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 nmdc:dobj-11-ttzdsb25 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 nmdc:dobj-11-g7bc9a55 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 nmdc:dobj-11-s7fr4t74 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 nmdc:dobj-11-8pqhsd67 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 nmdc:dobj-11-px8zq476 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 nmdc:dobj-11-v06h9b37 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15235ba07643fdf9be634dec16cb40d9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15235ba07643fdf9be634dec16cb40d9 nmdc:dobj-11-hepmdr68 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15235ba07643fdf9be634dec16cb40d9 nmdc:dobj-11-nvg19f16 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e23e02f296d5e9d401ee3aa5af6881e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e23e02f296d5e9d401ee3aa5af6881e nmdc:dobj-11-gqbd5019 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e23e02f296d5e9d401ee3aa5af6881e nmdc:dobj-11-8j015r78 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15641306d09678eeb660afe9baa0dd52 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15641306d09678eeb660afe9baa0dd52 nmdc:dobj-11-296r3g25 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15641306d09678eeb660afe9baa0dd52 nmdc:dobj-11-8x110q29 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e211c7908292e3c736ac51d366dafc0 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e211c7908292e3c736ac51d366dafc0 nmdc:dobj-11-xd59gd88 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e211c7908292e3c736ac51d366dafc0 nmdc:dobj-11-ap86mx28 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:438858d832b7204080d117925306057c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:438858d832b7204080d117925306057c nmdc:dobj-11-2g1xxv73 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:438858d832b7204080d117925306057c nmdc:dobj-11-gz52dh29 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15f09eb6e317e64163c3864a7d75b8f8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15f09eb6e317e64163c3864a7d75b8f8 nmdc:dobj-11-6b611d60 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-m1bker83.1/nmdc_wfrbt-11-m1bker83.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15f09eb6e317e64163c3864a7d75b8f8 nmdc:dobj-11-yapx4z88 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfrbt-11-sxdxt315.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m1bker83.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfrbt-11-m1bker83.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gcs98d33 INFO:root:omics_processing_id: nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4df425ae66b46dcf353097aa64c8935 nmdc:dobj-11-g4enqd79 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4df425ae66b46dcf353097aa64c8935 nmdc:dobj-11-vyw5e824 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-yzrza466 -INFO:root:New activity id created for nmdc:omprc-11-yzrza466 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qdkzn780.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-qdkzn780.1 +INFO:root:New activity id created for nmdc:omprc-11-yzrza466 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-c6y1ps12.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-c6y1ps12.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b7411005de416a82c68151462f846f7 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-qdkzn780.1/nmdc_wfrqc-11-qdkzn780.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b7411005de416a82c68151462f846f7 nmdc:dobj-11-0zybft91 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-c6y1ps12.1/nmdc_wfrqc-11-c6y1ps12.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b7411005de416a82c68151462f846f7 nmdc:dobj-11-46wtwv74 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qdkzn780.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-c6y1ps12.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:428534dbbc3d8201682fc3d8f5e818a6 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-qdkzn780.1/nmdc_wfrqc-11-qdkzn780.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428534dbbc3d8201682fc3d8f5e818a6 nmdc:dobj-11-1y6hcj02 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-c6y1ps12.1/nmdc_wfrqc-11-c6y1ps12.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428534dbbc3d8201682fc3d8f5e818a6 nmdc:dobj-11-qr4ks459 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qdkzn780.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:07469a0fd749fc6d0294e945430740db nmdc:wfrqc-11-qdkzn780.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-c6y1ps12.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:07469a0fd749fc6d0294e945430740db nmdc:wfrqc-11-c6y1ps12.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-yzrza466 -INFO:root:New activity id created for nmdc:omprc-11-yzrza466 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hsy3zm79.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1 +INFO:root:New activity id created for nmdc:omprc-11-yzrza466 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7hd52989.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-7hd52989.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ce7da98fd8f8e273ed40ff018bc19deb -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1/nmdc_wfmgas-11-hsy3zm79.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce7da98fd8f8e273ed40ff018bc19deb nmdc:dobj-11-dxdkam41 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-7hd52989.1/nmdc_wfmgas-11-7hd52989.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce7da98fd8f8e273ed40ff018bc19deb nmdc:dobj-11-y4vzva34 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hsy3zm79.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7hd52989.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3fc277745ea0af909bd7c89141beb89 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1/nmdc_wfmgas-11-hsy3zm79.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c917868f2b1db5d25b821e3f0dda53e nmdc:dobj-11-4awxwv98 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-7hd52989.1/nmdc_wfmgas-11-7hd52989.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c917868f2b1db5d25b821e3f0dda53e nmdc:dobj-11-xsn4g906 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hsy3zm79.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7hd52989.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3162e231651b3f71e383e240c8f4be33 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1/nmdc_wfmgas-11-hsy3zm79.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3162e231651b3f71e383e240c8f4be33 nmdc:dobj-11-y5jybb61 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-7hd52989.1/nmdc_wfmgas-11-7hd52989.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3162e231651b3f71e383e240c8f4be33 nmdc:dobj-11-z6e21t46 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hsy3zm79.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:07469a0fd749fc6d0294e945430740db nmdc:wfmgas-11-hsy3zm79.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7hd52989.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:690a922236d7f0a3df8c4d3c6b2aca5b nmdc:dobj-11-qn8kd717 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-zw6pk924.1/nmdc_wfrbt-11-zw6pk924.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:690a922236d7f0a3df8c4d3c6b2aca5b nmdc:dobj-11-w69qs435 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zw6pk924.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e97d8a552f497bdea19fc444d8890b13 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e97d8a552f497bdea19fc444d8890b13 nmdc:dobj-11-hrbe5233 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-zw6pk924.1/nmdc_wfrbt-11-zw6pk924.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e97d8a552f497bdea19fc444d8890b13 nmdc:dobj-11-e16k9j81 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zw6pk924.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62e63bd91b0765d3858fc2791a14a4ea -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62e63bd91b0765d3858fc2791a14a4ea nmdc:dobj-11-khs3vc82 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-zw6pk924.1/nmdc_wfrbt-11-zw6pk924.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62e63bd91b0765d3858fc2791a14a4ea nmdc:dobj-11-4fx2dy47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zw6pk924.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d2e34c2b30fcc9db48a259e2e194b22e -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2e34c2b30fcc9db48a259e2e194b22e nmdc:dobj-11-1nrwm774 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-zw6pk924.1/nmdc_wfrbt-11-zw6pk924.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2e34c2b30fcc9db48a259e2e194b22e nmdc:dobj-11-xvm3a778 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zw6pk924.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8f2eb681beb53a20ae6c4dd00819634 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8f2eb681beb53a20ae6c4dd00819634 nmdc:dobj-11-fr43b176 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-zw6pk924.1/nmdc_wfrbt-11-zw6pk924.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8f2eb681beb53a20ae6c4dd00819634 nmdc:dobj-11-9fgx5f82 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zw6pk924.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73f0017a6c7866c263c64a437df23c7e -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a36f26239b60ebb3ca62f050ee6e4739 nmdc:dobj-11-ffqarm86 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-zw6pk924.1/nmdc_wfrbt-11-zw6pk924.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a36f26239b60ebb3ca62f050ee6e4739 nmdc:dobj-11-gcbh1244 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zw6pk924.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b2debb07a334d9c9eedfaf3f12ff2433 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2debb07a334d9c9eedfaf3f12ff2433 nmdc:dobj-11-e9s7q744 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-zw6pk924.1/nmdc_wfrbt-11-zw6pk924.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2debb07a334d9c9eedfaf3f12ff2433 nmdc:dobj-11-cr69z090 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zw6pk924.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:507af343316140c9e0e7ad26cfd8cf6b -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:507af343316140c9e0e7ad26cfd8cf6b nmdc:dobj-11-kyqadt05 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-zw6pk924.1/nmdc_wfrbt-11-zw6pk924.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:507af343316140c9e0e7ad26cfd8cf6b nmdc:dobj-11-fa7hy766 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:07469a0fd749fc6d0294e945430740db nmdc:wfrbt-11-bwc7em98.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zw6pk924.1_kraken2_krona.html 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3few2433.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52f0da1dff532763d55f479bdfb5362b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrqc-11-fyq9hf83.1/nmdc_wfrqc-11-fyq9hf83.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52f0da1dff532763d55f479bdfb5362b nmdc:dobj-11-ze9v8v48 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrqc-11-3few2433.1/nmdc_wfrqc-11-3few2433.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52f0da1dff532763d55f479bdfb5362b nmdc:dobj-11-xxq80x94 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fyq9hf83.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfrqc-11-fyq9hf83.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3few2433.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfrqc-11-3few2433.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-rf37rv10 -INFO:root:New activity id created for nmdc:omprc-11-rf37rv10 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8ymqfa49.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1 +INFO:root:New activity id created for nmdc:omprc-11-rf37rv10 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-nxjvm782.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-nxjvm782.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c9551f1e148f31aea5270994a18d84d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c9551f1e148f31aea5270994a18d84d nmdc:dobj-11-5qvk7817 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-nxjvm782.1/nmdc_wfmgas-11-nxjvm782.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c9551f1e148f31aea5270994a18d84d nmdc:dobj-11-7sjkkk68 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxjvm782.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1663c6cf4ee95f6ef34537203d31b228 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1663c6cf4ee95f6ef34537203d31b228 nmdc:dobj-11-n3qh5506 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-nxjvm782.1/nmdc_wfmgas-11-nxjvm782.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1663c6cf4ee95f6ef34537203d31b228 nmdc:dobj-11-q799k612 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxjvm782.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80fa4789cc2dc33b4fa4070b41a4ec40 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80fa4789cc2dc33b4fa4070b41a4ec40 nmdc:dobj-11-9ze60c21 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-nxjvm782.1/nmdc_wfmgas-11-nxjvm782.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80fa4789cc2dc33b4fa4070b41a4ec40 nmdc:dobj-11-ed4y6s85 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxjvm782.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc58adbee49b0f26fd33bc079e27afd5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc58adbee49b0f26fd33bc079e27afd5 nmdc:dobj-11-dkg47y64 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-nxjvm782.1/nmdc_wfmgas-11-nxjvm782.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc58adbee49b0f26fd33bc079e27afd5 nmdc:dobj-11-qkszye90 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxjvm782.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1460560b9cbc220b669761d855b9755 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1460560b9cbc220b669761d855b9755 nmdc:dobj-11-67vwt060 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-nxjvm782.1/nmdc_wfmgas-11-nxjvm782.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1460560b9cbc220b669761d855b9755 nmdc:dobj-11-j2z9yn62 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfmgas-11-8ymqfa49.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nxjvm782.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfmgas-11-nxjvm782.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-rf37rv10 -INFO:root:New activity id created for nmdc:omprc-11-rf37rv10 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1nxxdz06.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1 +INFO:root:New activity id created for nmdc:omprc-11-rf37rv10 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-tsgb6d17.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:baed2100206fd23cf7a610c67694d54e -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baed2100206fd23cf7a610c67694d54e nmdc:dobj-11-xxq0qg94 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baed2100206fd23cf7a610c67694d54e nmdc:dobj-11-31btpt13 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5045870e25c680ea8552596c86cd4a88 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5045870e25c680ea8552596c86cd4a88 nmdc:dobj-11-p84tpc53 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5045870e25c680ea8552596c86cd4a88 nmdc:dobj-11-b6rez085 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2aa7848845cdedec9f768c7c62845869 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2aa7848845cdedec9f768c7c62845869 nmdc:dobj-11-5b5w3q60 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2aa7848845cdedec9f768c7c62845869 nmdc:dobj-11-mfvr2q70 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:210b8c6bace8020b6d2a0d9187dc05e6 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:210b8c6bace8020b6d2a0d9187dc05e6 nmdc:dobj-11-jthvj859 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:210b8c6bace8020b6d2a0d9187dc05e6 nmdc:dobj-11-xsfas007 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f17427c22ec617560cc33baaa635414 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f17427c22ec617560cc33baaa635414 nmdc:dobj-11-9h4jva53 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f17427c22ec617560cc33baaa635414 nmdc:dobj-11-as0hsg35 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e958a7799c53160c16084b704b89a8fe -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e958a7799c53160c16084b704b89a8fe nmdc:dobj-11-5pg70820 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e958a7799c53160c16084b704b89a8fe nmdc:dobj-11-k876tq13 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 nmdc:dobj-11-py284b25 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 nmdc:dobj-11-7ahbmx96 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51930ed3dc3e95f11b90f0ad0b502c3a -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51930ed3dc3e95f11b90f0ad0b502c3a nmdc:dobj-11-q4k3sv66 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51930ed3dc3e95f11b90f0ad0b502c3a nmdc:dobj-11-0ppg6r75 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:30e62c9d1efb5507560099fc9782adc5 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:30e62c9d1efb5507560099fc9782adc5 nmdc:dobj-11-a37s3a91 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-tsgb6d17.1/nmdc_wfrbt-11-tsgb6d17.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:30e62c9d1efb5507560099fc9782adc5 nmdc:dobj-11-pcxn2n57 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfrbt-11-1nxxdz06.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tsgb6d17.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfrbt-11-tsgb6d17.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-rf37rv10 INFO:root:omics_processing_id: nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:967517f83a03de07d4c0eb53f7c83f05 nmdc:dobj-11-j00zn540 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:967517f83a03de07d4c0eb53f7c83f05 nmdc:dobj-11-ja3gps65 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ne1fzr77 -INFO:root:New activity id created for nmdc:omprc-11-ne1fzr77 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vtkq7397.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrqc-11-vtkq7397.1 +INFO:root:New activity id created for nmdc:omprc-11-ne1fzr77 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-n35k8k29.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrqc-11-n35k8k29.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e60197c7e994021f69a3895f2d4d8eb3 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrqc-11-vtkq7397.1/nmdc_wfrqc-11-vtkq7397.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e60197c7e994021f69a3895f2d4d8eb3 nmdc:dobj-11-399ch453 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrqc-11-n35k8k29.1/nmdc_wfrqc-11-n35k8k29.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e60197c7e994021f69a3895f2d4d8eb3 nmdc:dobj-11-cma65g14 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vtkq7397.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n35k8k29.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1fc1210cd720b133a89472e787fa86c -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrqc-11-vtkq7397.1/nmdc_wfrqc-11-vtkq7397.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1fc1210cd720b133a89472e787fa86c nmdc:dobj-11-j5m9a136 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrqc-11-n35k8k29.1/nmdc_wfrqc-11-n35k8k29.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1fc1210cd720b133a89472e787fa86c nmdc:dobj-11-wsydan53 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vtkq7397.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfrqc-11-vtkq7397.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n35k8k29.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfrqc-11-n35k8k29.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ne1fzr77 -INFO:root:New activity id created for nmdc:omprc-11-ne1fzr77 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-twvcr452.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1 +INFO:root:New activity id created for nmdc:omprc-11-ne1fzr77 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-9rwbg242.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-9rwbg242.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:faa801494bd5c59f2c74c8347b3919a1 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faa801494bd5c59f2c74c8347b3919a1 nmdc:dobj-11-wxkqh941 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-9rwbg242.1/nmdc_wfmgas-11-9rwbg242.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faa801494bd5c59f2c74c8347b3919a1 nmdc:dobj-11-ptwem093 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9rwbg242.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82e36fe1492818c0ec66d1cd6b545437 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82e36fe1492818c0ec66d1cd6b545437 nmdc:dobj-11-d8fd9n40 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-9rwbg242.1/nmdc_wfmgas-11-9rwbg242.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82e36fe1492818c0ec66d1cd6b545437 nmdc:dobj-11-8a6d2708 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9rwbg242.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f81bb50fba9c05745cfd298cfbe3481b -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f81bb50fba9c05745cfd298cfbe3481b nmdc:dobj-11-rcvybv46 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-9rwbg242.1/nmdc_wfmgas-11-9rwbg242.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f81bb50fba9c05745cfd298cfbe3481b nmdc:dobj-11-qqfyv649 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9rwbg242.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f732fd9bb21687e4353521ca123593f0 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f732fd9bb21687e4353521ca123593f0 nmdc:dobj-11-3q901w08 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-9rwbg242.1/nmdc_wfmgas-11-9rwbg242.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f732fd9bb21687e4353521ca123593f0 nmdc:dobj-11-18745083 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9rwbg242.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b34b35041359938246655f6e851699dc -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b34b35041359938246655f6e851699dc nmdc:dobj-11-bfhkv283 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-9rwbg242.1/nmdc_wfmgas-11-9rwbg242.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b34b35041359938246655f6e851699dc nmdc:dobj-11-yw9zpe68 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfmgas-11-twvcr452.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9rwbg242.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfmgas-11-9rwbg242.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ne1fzr77 -INFO:root:New activity id created for nmdc:omprc-11-ne1fzr77 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-9bcdc448.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1 +INFO:root:New activity id created for nmdc:omprc-11-ne1fzr77 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-3a31ap74.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02a87bccf020ebf38fa55771da1a39b8 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02a87bccf020ebf38fa55771da1a39b8 nmdc:dobj-11-hqb2as88 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02a87bccf020ebf38fa55771da1a39b8 nmdc:dobj-11-negnep98 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 nmdc:dobj-11-dfn4fq47 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 nmdc:dobj-11-p42eth10 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e3ff94d67160a4b9810d3c0716b676f -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e3ff94d67160a4b9810d3c0716b676f nmdc:dobj-11-144tn228 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e3ff94d67160a4b9810d3c0716b676f nmdc:dobj-11-k524tq24 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:623812cb5aebbe8b96914b22f055faa9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:623812cb5aebbe8b96914b22f055faa9 nmdc:dobj-11-1qyrvb35 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:623812cb5aebbe8b96914b22f055faa9 nmdc:dobj-11-3d5vx657 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 nmdc:dobj-11-f6sj8947 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 nmdc:dobj-11-s8bkn357 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2221531a2bbf6cfb3ea8eb0d513ba6d6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2221531a2bbf6cfb3ea8eb0d513ba6d6 nmdc:dobj-11-k0s0s326 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2221531a2bbf6cfb3ea8eb0d513ba6d6 nmdc:dobj-11-3vghc274 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f37c12739b50edd11198b9c0fbeed6cb -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f37c12739b50edd11198b9c0fbeed6cb nmdc:dobj-11-0qzh9s90 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f37c12739b50edd11198b9c0fbeed6cb nmdc:dobj-11-d2x7b486 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e6d74ec82dca134de4dd3f62a4042eb -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e6d74ec82dca134de4dd3f62a4042eb nmdc:dobj-11-5y0e5526 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e6d74ec82dca134de4dd3f62a4042eb nmdc:dobj-11-25cmcv75 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f7adb75056ddd0b4e63066d322e02a2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f7adb75056ddd0b4e63066d322e02a2 nmdc:dobj-11-y6d1w544 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-3a31ap74.1/nmdc_wfrbt-11-3a31ap74.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f7adb75056ddd0b4e63066d322e02a2 nmdc:dobj-11-aa1g7c30 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfrbt-11-9bcdc448.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3a31ap74.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfrbt-11-3a31ap74.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ne1fzr77 INFO:root:omics_processing_id: nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8224d0f7d3ceb191111f6d49e415afc8 nmdc:dobj-11-b5dygq34 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8224d0f7d3ceb191111f6d49e415afc8 nmdc:dobj-11-kqqksh70 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m8nz8d35 -INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7rv9x998.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-7rv9x998.1 +INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-6a8nj106.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6a8nj106.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fcfd647558a4ef62478c90adde51806 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-7rv9x998.1/nmdc_wfrqc-11-7rv9x998.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fcfd647558a4ef62478c90adde51806 nmdc:dobj-11-apbm1d85 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-6a8nj106.1/nmdc_wfrqc-11-6a8nj106.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fcfd647558a4ef62478c90adde51806 nmdc:dobj-11-fxw1be15 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7rv9x998.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfrqc-11-7rv9x998.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6a8nj106.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfrqc-11-6a8nj106.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m8nz8d35 -INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-s601ad46.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1 +INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-r1ckft59.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-r1ckft59.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c86720388b57a8560fd9175da9b85c8b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c86720388b57a8560fd9175da9b85c8b nmdc:dobj-11-ga8b9q59 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-r1ckft59.1/nmdc_wfmgas-11-r1ckft59.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c86720388b57a8560fd9175da9b85c8b nmdc:dobj-11-krr20q04 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r1ckft59.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd28211d3f934b43916c5e73819bc8b6 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd28211d3f934b43916c5e73819bc8b6 nmdc:dobj-11-h88shm81 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-r1ckft59.1/nmdc_wfmgas-11-r1ckft59.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd28211d3f934b43916c5e73819bc8b6 nmdc:dobj-11-vt21rk93 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r1ckft59.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:347aa6885ede562646eb8d9b2177999b -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:347aa6885ede562646eb8d9b2177999b nmdc:dobj-11-641ny236 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-r1ckft59.1/nmdc_wfmgas-11-r1ckft59.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:347aa6885ede562646eb8d9b2177999b nmdc:dobj-11-r01pq441 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r1ckft59.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:041cd4f4fc2739f7bff0df87bf82135c -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:041cd4f4fc2739f7bff0df87bf82135c nmdc:dobj-11-gz000d82 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-r1ckft59.1/nmdc_wfmgas-11-r1ckft59.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:041cd4f4fc2739f7bff0df87bf82135c nmdc:dobj-11-f2g3ay62 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r1ckft59.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ba3d490fab94cd5694233e6e3f42c718 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba3d490fab94cd5694233e6e3f42c718 nmdc:dobj-11-7qm2qh66 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-r1ckft59.1/nmdc_wfmgas-11-r1ckft59.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba3d490fab94cd5694233e6e3f42c718 nmdc:dobj-11-es6man61 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfmgas-11-s601ad46.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r1ckft59.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfmgas-11-r1ckft59.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m8nz8d35 -INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-z0yz6j35.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1 +INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-6rezpz21.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b6185a5e796df1bcfb6096ad89a7aac -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b6185a5e796df1bcfb6096ad89a7aac nmdc:dobj-11-m1py8998 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b6185a5e796df1bcfb6096ad89a7aac nmdc:dobj-11-zx1ste18 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1175e66c5db74cf3dfe12efdaf692c5 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1175e66c5db74cf3dfe12efdaf692c5 nmdc:dobj-11-t67j3m73 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1175e66c5db74cf3dfe12efdaf692c5 nmdc:dobj-11-pb93p151 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:76786ed3956bbfbdefe27f0b6dd3b41a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:76786ed3956bbfbdefe27f0b6dd3b41a nmdc:dobj-11-qas8g417 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:76786ed3956bbfbdefe27f0b6dd3b41a nmdc:dobj-11-8emzc620 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d76ff87998c13818880d0316b63187f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d76ff87998c13818880d0316b63187f nmdc:dobj-11-566mnf87 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d76ff87998c13818880d0316b63187f nmdc:dobj-11-wg3geq15 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d1250a731e6492e6178e5b20a7b8a2a -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d1250a731e6492e6178e5b20a7b8a2a nmdc:dobj-11-8njwvy21 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d1250a731e6492e6178e5b20a7b8a2a nmdc:dobj-11-pjqqfn90 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e2ace15f115399d01070d31b2cb3275 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e2ace15f115399d01070d31b2cb3275 nmdc:dobj-11-vdjn5317 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e2ace15f115399d01070d31b2cb3275 nmdc:dobj-11-3q3qj909 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ff551f313326d2d99f41215faccc3b4 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ff551f313326d2d99f41215faccc3b4 nmdc:dobj-11-gvg6kw20 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ff551f313326d2d99f41215faccc3b4 nmdc:dobj-11-s5jbrw64 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd8b08b0c9c805f39331087692e6be41 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd8b08b0c9c805f39331087692e6be41 nmdc:dobj-11-78ys4189 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd8b08b0c9c805f39331087692e6be41 nmdc:dobj-11-rs4htm33 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 nmdc:dobj-11-35742v65 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-6rezpz21.1/nmdc_wfrbt-11-6rezpz21.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 nmdc:dobj-11-29xhpe98 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfrbt-11-z0yz6j35.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6rezpz21.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfrbt-11-6rezpz21.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m8nz8d35 INFO:root:omics_processing_id: nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f57dcee7abd6613a46bed9e6d3bc61b nmdc:dobj-11-phf3rh27 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f57dcee7abd6613a46bed9e6d3bc61b nmdc:dobj-11-77xdc844 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-3kdzgf81 -INFO:root:New activity id created for nmdc:omprc-11-3kdzgf81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g3p3z194.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrqc-11-g3p3z194.1 +INFO:root:New activity id created for nmdc:omprc-11-3kdzgf81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0mznr265.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrqc-11-0mznr265.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1cf3465f614f908cc61b9b62ba714a93 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrqc-11-g3p3z194.1/nmdc_wfrqc-11-g3p3z194.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1cf3465f614f908cc61b9b62ba714a93 nmdc:dobj-11-14cmkv94 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrqc-11-0mznr265.1/nmdc_wfrqc-11-0mznr265.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1cf3465f614f908cc61b9b62ba714a93 nmdc:dobj-11-bav7ds52 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g3p3z194.1_filtered.fastq.gz 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dccd678c9dd9a2428504d7545a50103a nmdc:dobj-11-b8eyke64 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-dkrwej46.1/nmdc_wfrbt-11-dkrwej46.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dccd678c9dd9a2428504d7545a50103a nmdc:dobj-11-c3mg7n03 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dkrwej46.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f813e000a7d850611c67693832ce01fd -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f813e000a7d850611c67693832ce01fd nmdc:dobj-11-mh8k0b46 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-dkrwej46.1/nmdc_wfrbt-11-dkrwej46.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f813e000a7d850611c67693832ce01fd nmdc:dobj-11-j9kfwr51 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dkrwej46.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:946779b32f4331010418fc96cff2f925 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:946779b32f4331010418fc96cff2f925 nmdc:dobj-11-8pna7920 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-dkrwej46.1/nmdc_wfrbt-11-dkrwej46.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:946779b32f4331010418fc96cff2f925 nmdc:dobj-11-qp3d4q62 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dkrwej46.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26b6c91419fcc609e866b73ff56b4b3b -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48c49d2858dc9a27b6a70536cfabbf5c nmdc:dobj-11-z548vv30 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-dkrwej46.1/nmdc_wfrbt-11-dkrwej46.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48c49d2858dc9a27b6a70536cfabbf5c nmdc:dobj-11-cnerpz81 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dkrwej46.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab514bf7bf2e5dfb097c4e51fb6acb00 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path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:339c19187baa0181fad7ef791a234e81 nmdc:dobj-11-hd29f862 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-dkrwej46.1/nmdc_wfrbt-11-dkrwej46.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:339c19187baa0181fad7ef791a234e81 nmdc:dobj-11-t0g5xj89 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3b24917b6908e3976cea38aaeab818a nmdc:wfrbt-11-t0vj0t76.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dkrwej46.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3b24917b6908e3976cea38aaeab818a nmdc:wfrbt-11-dkrwej46.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-3kdzgf81 INFO:root:omics_processing_id: nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf4c63cdb2f8d4b17dc591ac83c042e0 nmdc:dobj-11-8xy5nr92 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf4c63cdb2f8d4b17dc591ac83c042e0 nmdc:dobj-11-yfqab126 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-k95tgy11 -INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rmh11f12.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-rmh11f12.1 +INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-y93d7895.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-y93d7895.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:646d88c14ffcc7d5724b138139ef0740 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-rmh11f12.1/nmdc_wfrqc-11-rmh11f12.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:646d88c14ffcc7d5724b138139ef0740 nmdc:dobj-11-04q0jq53 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-y93d7895.1/nmdc_wfrqc-11-y93d7895.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:646d88c14ffcc7d5724b138139ef0740 nmdc:dobj-11-f7cq8r24 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rmh11f12.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-y93d7895.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4737643124cea969498985d8cb0f7148 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-rmh11f12.1/nmdc_wfrqc-11-rmh11f12.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4737643124cea969498985d8cb0f7148 nmdc:dobj-11-0xqgt095 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-y93d7895.1/nmdc_wfrqc-11-y93d7895.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4737643124cea969498985d8cb0f7148 nmdc:dobj-11-t8skp247 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rmh11f12.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfrqc-11-rmh11f12.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-y93d7895.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfrqc-11-y93d7895.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-k95tgy11 -INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ddyadn86.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1 +INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jrd6mq37.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-jrd6mq37.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2876f90fb777b0870060aeab0d8d6805 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2876f90fb777b0870060aeab0d8d6805 nmdc:dobj-11-p9ed4t02 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-jrd6mq37.1/nmdc_wfmgas-11-jrd6mq37.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2876f90fb777b0870060aeab0d8d6805 nmdc:dobj-11-53rn8s35 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrd6mq37.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65f0a55ac61f5d41f2cc4c8fd7119400 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65f0a55ac61f5d41f2cc4c8fd7119400 nmdc:dobj-11-0d5y8b02 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-jrd6mq37.1/nmdc_wfmgas-11-jrd6mq37.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65f0a55ac61f5d41f2cc4c8fd7119400 nmdc:dobj-11-hspm6m69 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrd6mq37.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eacb484bf0df0ac443d61bb462348714 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eacb484bf0df0ac443d61bb462348714 nmdc:dobj-11-sfvkca86 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-jrd6mq37.1/nmdc_wfmgas-11-jrd6mq37.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eacb484bf0df0ac443d61bb462348714 nmdc:dobj-11-hqwr0a96 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrd6mq37.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f5d1924e8ac016a3cc58bcf5447f319 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f5d1924e8ac016a3cc58bcf5447f319 nmdc:dobj-11-98525g08 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-jrd6mq37.1/nmdc_wfmgas-11-jrd6mq37.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f5d1924e8ac016a3cc58bcf5447f319 nmdc:dobj-11-e58mqv39 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrd6mq37.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6735368c34cd89f88883ba8be1435281 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6735368c34cd89f88883ba8be1435281 nmdc:dobj-11-rb2aqs32 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-jrd6mq37.1/nmdc_wfmgas-11-jrd6mq37.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6735368c34cd89f88883ba8be1435281 nmdc:dobj-11-jc7byn08 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfmgas-11-ddyadn86.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrd6mq37.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfmgas-11-jrd6mq37.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-k95tgy11 -INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-m5b2aw33.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1 +INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-mnqpr937.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a38e1214509fb756019f5aa6efa06cb -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a38e1214509fb756019f5aa6efa06cb nmdc:dobj-11-fr1vgk51 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a38e1214509fb756019f5aa6efa06cb nmdc:dobj-11-q7jnat37 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b862fdc0569c76739f06e4dedb1f96ae -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b862fdc0569c76739f06e4dedb1f96ae nmdc:dobj-11-ydndd249 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b862fdc0569c76739f06e4dedb1f96ae nmdc:dobj-11-cdengs44 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:474fc04537d441bf10248448601b98c5 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:474fc04537d441bf10248448601b98c5 nmdc:dobj-11-jywak935 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:474fc04537d441bf10248448601b98c5 nmdc:dobj-11-x7cv5s36 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:826950b35dda3575c9b22162aca0456a -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:826950b35dda3575c9b22162aca0456a nmdc:dobj-11-pbr6rq20 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:826950b35dda3575c9b22162aca0456a nmdc:dobj-11-3fcb7w90 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2732870d58f60e64a60c05f499e8ea32 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2732870d58f60e64a60c05f499e8ea32 nmdc:dobj-11-3wceqx62 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2732870d58f60e64a60c05f499e8ea32 nmdc:dobj-11-kwsnj487 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bdd42a6d86423fea126edeba1482438 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bdd42a6d86423fea126edeba1482438 nmdc:dobj-11-b4m4nc24 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bdd42a6d86423fea126edeba1482438 nmdc:dobj-11-c43vfk15 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:deb626bf8459ffb29623c12aab935b9b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:deb626bf8459ffb29623c12aab935b9b nmdc:dobj-11-4b1jkx98 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:deb626bf8459ffb29623c12aab935b9b nmdc:dobj-11-t94ak356 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 nmdc:dobj-11-dmfm0684 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 nmdc:dobj-11-z0n8v828 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de681291a4806cada5a435b0a268bbc5 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de681291a4806cada5a435b0a268bbc5 nmdc:dobj-11-7896dh54 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-mnqpr937.1/nmdc_wfrbt-11-mnqpr937.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de681291a4806cada5a435b0a268bbc5 nmdc:dobj-11-am592c31 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfrbt-11-m5b2aw33.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnqpr937.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfrbt-11-mnqpr937.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-k95tgy11 INFO:root:omics_processing_id: nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82254db0eab492d5074a5d36b96e491a nmdc:dobj-11-zm1ef344 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82254db0eab492d5074a5d36b96e491a nmdc:dobj-11-eww4z573 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-f4eray08 -INFO:root:New activity id created for nmdc:omprc-11-f4eray08 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-p6q0cc79.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrqc-11-p6q0cc79.1 +INFO:root:New activity id created for nmdc:omprc-11-f4eray08 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0mbdb759.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0mbdb759.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59a65be5ea1e040bba022058db19fedc -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrqc-11-p6q0cc79.1/nmdc_wfrqc-11-p6q0cc79.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59a65be5ea1e040bba022058db19fedc nmdc:dobj-11-p36k3432 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrqc-11-0mbdb759.1/nmdc_wfrqc-11-0mbdb759.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59a65be5ea1e040bba022058db19fedc nmdc:dobj-11-d52m5x73 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p6q0cc79.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:62d798b0bc7f186c279aed20d9dfe0d0 nmdc:wfrqc-11-p6q0cc79.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0mbdb759.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:62d798b0bc7f186c279aed20d9dfe0d0 nmdc:wfrqc-11-0mbdb759.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-f4eray08 -INFO:root:New activity id created for nmdc:omprc-11-f4eray08 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bg03v969.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-bg03v969.1 +INFO:root:New activity id created for nmdc:omprc-11-f4eray08 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-sxjsqp97.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-sxjsqp97.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c80d763b2a6f29018c4b38bcc832c1d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-bg03v969.1/nmdc_wfmgas-11-bg03v969.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c80d763b2a6f29018c4b38bcc832c1d nmdc:dobj-11-h045h108 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-sxjsqp97.1/nmdc_wfmgas-11-sxjsqp97.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c80d763b2a6f29018c4b38bcc832c1d nmdc:dobj-11-f7p1j621 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bg03v969.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sxjsqp97.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd297c98e93c06074df6bee8a256f016 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-bg03v969.1/nmdc_wfmgas-11-bg03v969.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd297c98e93c06074df6bee8a256f016 nmdc:dobj-11-4qh12272 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-sxjsqp97.1/nmdc_wfmgas-11-sxjsqp97.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd297c98e93c06074df6bee8a256f016 nmdc:dobj-11-fs4tn031 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bg03v969.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sxjsqp97.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5568d32425fac01abdcc941bdbf7cb09 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-bg03v969.1/nmdc_wfmgas-11-bg03v969.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5568d32425fac01abdcc941bdbf7cb09 nmdc:dobj-11-6nv3zg32 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-sxjsqp97.1/nmdc_wfmgas-11-sxjsqp97.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5568d32425fac01abdcc941bdbf7cb09 nmdc:dobj-11-7bg8n598 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bg03v969.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sxjsqp97.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e73261a152ca81e49124f8eb6dd8271 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-bg03v969.1/nmdc_wfmgas-11-bg03v969.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e73261a152ca81e49124f8eb6dd8271 nmdc:dobj-11-x16dgp71 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-sxjsqp97.1/nmdc_wfmgas-11-sxjsqp97.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e73261a152ca81e49124f8eb6dd8271 nmdc:dobj-11-jrahfj43 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bg03v969.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sxjsqp97.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9ec78c306d5efffc28a6b338b0f41e40 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-bg03v969.1/nmdc_wfmgas-11-bg03v969.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ec78c306d5efffc28a6b338b0f41e40 nmdc:dobj-11-f3r7s224 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfmgas-11-sxjsqp97.1/nmdc_wfmgas-11-sxjsqp97.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ec78c306d5efffc28a6b338b0f41e40 nmdc:dobj-11-0bskvx52 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bg03v969.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:62d798b0bc7f186c279aed20d9dfe0d0 nmdc:wfmgas-11-bg03v969.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sxjsqp97.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:95d67ace97bf6b69ae023b0925c01abf nmdc:dobj-11-19ddkz16 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:95d67ace97bf6b69ae023b0925c01abf nmdc:dobj-11-90jng842 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a308ef6c9a3b0f1054752cad8ad71596 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a308ef6c9a3b0f1054752cad8ad71596 nmdc:dobj-11-53krw829 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a308ef6c9a3b0f1054752cad8ad71596 nmdc:dobj-11-hqp40t54 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:83e7f3a3f086352e8a82d204534ada68 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83e7f3a3f086352e8a82d204534ada68 nmdc:dobj-11-06m43j80 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83e7f3a3f086352e8a82d204534ada68 nmdc:dobj-11-2tf05942 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d1069317969e0bf58d4b35572c7fef1c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1069317969e0bf58d4b35572c7fef1c nmdc:dobj-11-gwrqq581 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1069317969e0bf58d4b35572c7fef1c nmdc:dobj-11-5wr8pg83 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b17d51b78c9968df0408febb80cc9b00 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b17d51b78c9968df0408febb80cc9b00 nmdc:dobj-11-zrsk1065 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b17d51b78c9968df0408febb80cc9b00 nmdc:dobj-11-2p06yh79 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:901f4ef845f6b1a8b2f7c86702e3cae0 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:901f4ef845f6b1a8b2f7c86702e3cae0 nmdc:dobj-11-jbfppg41 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:901f4ef845f6b1a8b2f7c86702e3cae0 nmdc:dobj-11-22hyjq58 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0674278738def7a9236bd7835dec3560 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0674278738def7a9236bd7835dec3560 nmdc:dobj-11-hv96v419 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0674278738def7a9236bd7835dec3560 nmdc:dobj-11-5m3fxf06 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10d3cf3416ffabbfc57ef646dfef5794 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10d3cf3416ffabbfc57ef646dfef5794 nmdc:dobj-11-7qqewy93 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10d3cf3416ffabbfc57ef646dfef5794 nmdc:dobj-11-w1xvf074 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ba6b3b97535f8a5aff0eef041442f32 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ba6b3b97535f8a5aff0eef041442f32 nmdc:dobj-11-wmn59s67 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-e0vf0h32.1/nmdc_wfrbt-11-e0vf0h32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ba6b3b97535f8a5aff0eef041442f32 nmdc:dobj-11-wkqtp662 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:62d798b0bc7f186c279aed20d9dfe0d0 nmdc:wfrbt-11-fxm2hg03.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e0vf0h32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:62d798b0bc7f186c279aed20d9dfe0d0 nmdc:wfrbt-11-e0vf0h32.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-f4eray08 INFO:root:omics_processing_id: nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49b6ab7f5a43b171f4b6de616624fe02 nmdc:dobj-11-v1efvt69 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49b6ab7f5a43b171f4b6de616624fe02 nmdc:dobj-11-bdab6b19 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ynq39f38 -INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dqpecp83.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrqc-11-dqpecp83.1 +INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-x8gk3f06.1 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nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfrqc-11-dqpecp83.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x8gk3f06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfrqc-11-x8gk3f06.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ynq39f38 -INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-y9p92g91.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1 +INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-tehwg183.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-tehwg183.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2136555c4e8c6cf99f7de4bd3cda9fd4 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2136555c4e8c6cf99f7de4bd3cda9fd4 nmdc:dobj-11-jq6hkz04 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-tehwg183.1/nmdc_wfmgas-11-tehwg183.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2136555c4e8c6cf99f7de4bd3cda9fd4 nmdc:dobj-11-d1gemp66 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tehwg183.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fb0980ccfee06658b6d808ec232245e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fb0980ccfee06658b6d808ec232245e nmdc:dobj-11-amyw3z90 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-tehwg183.1/nmdc_wfmgas-11-tehwg183.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fb0980ccfee06658b6d808ec232245e nmdc:dobj-11-4jbad919 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tehwg183.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a179c7b8c2d4faa8774aa9d55c29cd84 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a179c7b8c2d4faa8774aa9d55c29cd84 nmdc:dobj-11-ppgtg673 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-tehwg183.1/nmdc_wfmgas-11-tehwg183.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a179c7b8c2d4faa8774aa9d55c29cd84 nmdc:dobj-11-9g94tz23 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tehwg183.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aef2f1ad1fb1a52a929fe7bb532729df -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aef2f1ad1fb1a52a929fe7bb532729df nmdc:dobj-11-t1v4js19 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-tehwg183.1/nmdc_wfmgas-11-tehwg183.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aef2f1ad1fb1a52a929fe7bb532729df nmdc:dobj-11-ghzt4b37 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tehwg183.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c9812d71dda10c62034bfbda53bd31c -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c9812d71dda10c62034bfbda53bd31c nmdc:dobj-11-rsetd423 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-tehwg183.1/nmdc_wfmgas-11-tehwg183.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c9812d71dda10c62034bfbda53bd31c nmdc:dobj-11-3kxr9g32 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfmgas-11-y9p92g91.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tehwg183.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfmgas-11-tehwg183.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ynq39f38 -INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kt6ha622.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1 +INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-xdxbm618.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f068fba7ce9a1b7af877a0a49d5948a2 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f068fba7ce9a1b7af877a0a49d5948a2 nmdc:dobj-11-g2vpnh59 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f068fba7ce9a1b7af877a0a49d5948a2 nmdc:dobj-11-n42mwm92 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32c79918dafb7609623d1f23dc7b4bc5 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32c79918dafb7609623d1f23dc7b4bc5 nmdc:dobj-11-gwa5qx35 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32c79918dafb7609623d1f23dc7b4bc5 nmdc:dobj-11-z4bndg85 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b64574b49b04ae5e4e4e5b43d7d274b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b64574b49b04ae5e4e4e5b43d7d274b nmdc:dobj-11-aaswq210 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b64574b49b04ae5e4e4e5b43d7d274b nmdc:dobj-11-ezcqdc15 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:00fafd896809d58767b902d1c5915db8 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00fafd896809d58767b902d1c5915db8 nmdc:dobj-11-qs8vs428 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00fafd896809d58767b902d1c5915db8 nmdc:dobj-11-91x80t35 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a76377ff252e930286d7f4a7e13103b4 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a76377ff252e930286d7f4a7e13103b4 nmdc:dobj-11-qq1znb80 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a76377ff252e930286d7f4a7e13103b4 nmdc:dobj-11-ksna6n92 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71336e0a19a89c8826ee4fce1620ede2 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71336e0a19a89c8826ee4fce1620ede2 nmdc:dobj-11-mm2bc233 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71336e0a19a89c8826ee4fce1620ede2 nmdc:dobj-11-njrpar92 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:981fa88038f8c9863c4c07a68491b9d8 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:981fa88038f8c9863c4c07a68491b9d8 nmdc:dobj-11-zv06fz09 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:981fa88038f8c9863c4c07a68491b9d8 nmdc:dobj-11-5a3f3w24 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e3820736b404c3ae54aefcd887eaaad -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e3820736b404c3ae54aefcd887eaaad nmdc:dobj-11-g7gj0732 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e3820736b404c3ae54aefcd887eaaad nmdc:dobj-11-mdkdj765 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd406700f630317282ce5bca93db8e01 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd406700f630317282ce5bca93db8e01 nmdc:dobj-11-nz20xy04 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-xdxbm618.1/nmdc_wfrbt-11-xdxbm618.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd406700f630317282ce5bca93db8e01 nmdc:dobj-11-sx0ywj78 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfrbt-11-kt6ha622.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xdxbm618.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfrbt-11-xdxbm618.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ynq39f38 INFO:root:omics_processing_id: nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:452104acaf8a6d065f9a8fdbd64ee882 nmdc:dobj-11-wnpaaz52 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:452104acaf8a6d065f9a8fdbd64ee882 nmdc:dobj-11-w9r6c731 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-r2n4hp61 -INFO:root:New activity id created for nmdc:omprc-11-r2n4hp61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hzjzhr96.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrqc-11-hzjzhr96.1 +INFO:root:New activity id created for nmdc:omprc-11-r2n4hp61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-af6mdq20.1 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-ztszje97.1/nmdc_wfmgas-11-ztszje97.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c127fb0bfbbb33cecda3574d1506dc1a nmdc:dobj-11-syg17y36 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-wffkjf29.1/nmdc_wfmgas-11-wffkjf29.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c127fb0bfbbb33cecda3574d1506dc1a nmdc:dobj-11-bhb2fh92 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ztszje97.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wffkjf29.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:81d6d8b2bc024d33b02c2bbfaf893e43 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-ztszje97.1/nmdc_wfmgas-11-ztszje97.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ad64c80eb358337a7eab45d7afbf150 nmdc:dobj-11-8rqxe734 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-wffkjf29.1/nmdc_wfmgas-11-wffkjf29.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ad64c80eb358337a7eab45d7afbf150 nmdc:dobj-11-gjx8my70 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ztszje97.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wffkjf29.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36bbbe90278c8b6e8004bd4930e8b27d -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-ztszje97.1/nmdc_wfmgas-11-ztszje97.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36bbbe90278c8b6e8004bd4930e8b27d nmdc:dobj-11-hvckg986 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-wffkjf29.1/nmdc_wfmgas-11-wffkjf29.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36bbbe90278c8b6e8004bd4930e8b27d nmdc:dobj-11-shwmq856 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ztszje97.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wffkjf29.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1eb1dda732d8ea0bfc97e1c0dc1e3dab -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1de94e79e1c2712b2de6a06043f3c6c nmdc:dobj-11-qcv0qa16 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1de94e79e1c2712b2de6a06043f3c6c nmdc:dobj-11-ccxb5p65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fdf29ba4cc43ca7736c46067a9f3351 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fdf29ba4cc43ca7736c46067a9f3351 nmdc:dobj-11-z92vev57 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fdf29ba4cc43ca7736c46067a9f3351 nmdc:dobj-11-4k4vzp49 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26245482f5eda14a16009f36c78a468a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26245482f5eda14a16009f36c78a468a nmdc:dobj-11-nvwgpn72 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26245482f5eda14a16009f36c78a468a nmdc:dobj-11-zdaxsv07 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:264bbbabc0400e955a1ee47b23899b85 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:264bbbabc0400e955a1ee47b23899b85 nmdc:dobj-11-wfz6ab93 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:264bbbabc0400e955a1ee47b23899b85 nmdc:dobj-11-hgdqw990 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7917ca1612bc2183c379fd41630fc868 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7917ca1612bc2183c379fd41630fc868 nmdc:dobj-11-7t0emg92 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7917ca1612bc2183c379fd41630fc868 nmdc:dobj-11-dntm0387 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4afce32f5922f3d24974731cffa0e072 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4afce32f5922f3d24974731cffa0e072 nmdc:dobj-11-n99wmw22 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4afce32f5922f3d24974731cffa0e072 nmdc:dobj-11-qm01fd78 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c31fd3626fcc7433c2ca7ec8cc7d5be -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c31fd3626fcc7433c2ca7ec8cc7d5be nmdc:dobj-11-4444et39 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c31fd3626fcc7433c2ca7ec8cc7d5be nmdc:dobj-11-9pwwrd15 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:28a110a5930d4437e661d088fccd2e5b -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28a110a5930d4437e661d088fccd2e5b nmdc:dobj-11-4368e371 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28a110a5930d4437e661d088fccd2e5b nmdc:dobj-11-nk5wj775 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc821ed55b3013746236929f35c07653 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc821ed55b3013746236929f35c07653 nmdc:dobj-11-j4gtmp38 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-nh9fbn56.1/nmdc_wfrbt-11-nh9fbn56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc821ed55b3013746236929f35c07653 nmdc:dobj-11-fd97bh42 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:496e20a5a725b9fe78cf583f35ed221f nmdc:wfrbt-11-wjkzqv59.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nh9fbn56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:496e20a5a725b9fe78cf583f35ed221f nmdc:wfrbt-11-nh9fbn56.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-r2n4hp61 INFO:root:omics_processing_id: nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:340ba2dc2e14b38bf653cbc8dcedaf9b nmdc:dobj-11-880b0c27 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:340ba2dc2e14b38bf653cbc8dcedaf9b nmdc:dobj-11-7dqp7a83 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zdmbqr75 -INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-tp401g27.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-tp401g27.1 +INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ddvtcw26.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-ddvtcw26.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9574a9d240faa7d14b437a54f781aae5 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-tp401g27.1/nmdc_wfrqc-11-tp401g27.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9574a9d240faa7d14b437a54f781aae5 nmdc:dobj-11-er80yx28 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-ddvtcw26.1/nmdc_wfrqc-11-ddvtcw26.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9574a9d240faa7d14b437a54f781aae5 nmdc:dobj-11-3kyvq729 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tp401g27.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ddvtcw26.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6be4dde34892f494951c3aa6b1ef20f5 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-tp401g27.1/nmdc_wfrqc-11-tp401g27.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6be4dde34892f494951c3aa6b1ef20f5 nmdc:dobj-11-3g0s4n84 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-ddvtcw26.1/nmdc_wfrqc-11-ddvtcw26.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6be4dde34892f494951c3aa6b1ef20f5 nmdc:dobj-11-2cmezx08 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tp401g27.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:819322fc2eb4d2ac7c0a660a09753c1a nmdc:wfrqc-11-tp401g27.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ddvtcw26.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:819322fc2eb4d2ac7c0a660a09753c1a nmdc:wfrqc-11-ddvtcw26.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zdmbqr75 -INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8355pd20.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-8355pd20.1 +INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-nmt7x939.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-nmt7x939.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6ca88412432aab946d39d1acc219493 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-8355pd20.1/nmdc_wfmgas-11-8355pd20.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6ca88412432aab946d39d1acc219493 nmdc:dobj-11-e7x5y648 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-nmt7x939.1/nmdc_wfmgas-11-nmt7x939.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6ca88412432aab946d39d1acc219493 nmdc:dobj-11-hfhdj603 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8355pd20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nmt7x939.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f1473374ec89d68b1ec2040b0f1ea69d -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-8355pd20.1/nmdc_wfmgas-11-8355pd20.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1473374ec89d68b1ec2040b0f1ea69d nmdc:dobj-11-np30aa67 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-nmt7x939.1/nmdc_wfmgas-11-nmt7x939.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1473374ec89d68b1ec2040b0f1ea69d nmdc:dobj-11-kzebtg61 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8355pd20.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nmt7x939.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc67b77cd5d0477b393cb14b7d951f2e -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-8355pd20.1/nmdc_wfmgas-11-8355pd20.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc67b77cd5d0477b393cb14b7d951f2e nmdc:dobj-11-3mwde340 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-nmt7x939.1/nmdc_wfmgas-11-nmt7x939.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc67b77cd5d0477b393cb14b7d951f2e nmdc:dobj-11-mjjxte32 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8355pd20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nmt7x939.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12d3fc6a3b428e42b5f4a5dcfffe331e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-8355pd20.1/nmdc_wfmgas-11-8355pd20.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12d3fc6a3b428e42b5f4a5dcfffe331e nmdc:dobj-11-10wdx509 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-nmt7x939.1/nmdc_wfmgas-11-nmt7x939.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12d3fc6a3b428e42b5f4a5dcfffe331e nmdc:dobj-11-cnvr8959 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8355pd20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nmt7x939.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7460ccce72e5cca71c16eed12f2606f3 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-8355pd20.1/nmdc_wfmgas-11-8355pd20.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7460ccce72e5cca71c16eed12f2606f3 nmdc:dobj-11-36aydp97 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-nmt7x939.1/nmdc_wfmgas-11-nmt7x939.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7460ccce72e5cca71c16eed12f2606f3 nmdc:dobj-11-m2b84r91 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8355pd20.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:819322fc2eb4d2ac7c0a660a09753c1a nmdc:wfmgas-11-8355pd20.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nmt7x939.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:819322fc2eb4d2ac7c0a660a09753c1a nmdc:wfmgas-11-nmt7x939.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-zdmbqr75 -INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-d5ztsj41.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1 +INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-amannn95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8009808473b4d07d26158a4b78e5adc6 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8009808473b4d07d26158a4b78e5adc6 nmdc:dobj-11-a2efdk53 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8009808473b4d07d26158a4b78e5adc6 nmdc:dobj-11-gw3gjv10 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:875dd6dee6a4037f6b8e1f9ddca12adb -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:875dd6dee6a4037f6b8e1f9ddca12adb nmdc:dobj-11-hv6efp47 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:875dd6dee6a4037f6b8e1f9ddca12adb nmdc:dobj-11-q3d8qt18 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9541adfd8828f5845b5dac50624ee85 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9541adfd8828f5845b5dac50624ee85 nmdc:dobj-11-37cpt107 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9541adfd8828f5845b5dac50624ee85 nmdc:dobj-11-e8r3n772 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80bd31c1a4547a82af98201bce0a62cb -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80bd31c1a4547a82af98201bce0a62cb nmdc:dobj-11-y9dsk473 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80bd31c1a4547a82af98201bce0a62cb nmdc:dobj-11-f1j4m126 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31763cdf3ec24a41415be8fe6b8a74f0 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31763cdf3ec24a41415be8fe6b8a74f0 nmdc:dobj-11-wh8yz316 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31763cdf3ec24a41415be8fe6b8a74f0 nmdc:dobj-11-b4jw7f79 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39b61c73ee7a96e6ed87665e511a5c36 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39b61c73ee7a96e6ed87665e511a5c36 nmdc:dobj-11-cczat034 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39b61c73ee7a96e6ed87665e511a5c36 nmdc:dobj-11-9h37dg03 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa45d91d913487c869787b2b0f212cff -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa45d91d913487c869787b2b0f212cff nmdc:dobj-11-r7k6fz92 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa45d91d913487c869787b2b0f212cff nmdc:dobj-11-gd2tw249 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2fa167e49f18a399b4714c4d0faef45f -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2fa167e49f18a399b4714c4d0faef45f nmdc:dobj-11-73fsxm16 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2fa167e49f18a399b4714c4d0faef45f nmdc:dobj-11-bjbh7d73 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2736512ac9420d3b84d858f8a6498b14 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2736512ac9420d3b84d858f8a6498b14 nmdc:dobj-11-aa6j3z12 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-amannn95.1/nmdc_wfrbt-11-amannn95.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2736512ac9420d3b84d858f8a6498b14 nmdc:dobj-11-m7fp2y63 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:819322fc2eb4d2ac7c0a660a09753c1a nmdc:wfrbt-11-d5ztsj41.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amannn95.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:819322fc2eb4d2ac7c0a660a09753c1a nmdc:wfrbt-11-amannn95.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-zdmbqr75 INFO:root:omics_processing_id: nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e0e0b9582935ccbf60eab11942ee902b nmdc:dobj-11-nxa9e447 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e0e0b9582935ccbf60eab11942ee902b nmdc:dobj-11-snk6rx55 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a9bm9657 -INFO:root:New activity id created for nmdc:omprc-11-a9bm9657 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g459k020.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrqc-11-g459k020.1 +INFO:root:New activity id created for nmdc:omprc-11-a9bm9657 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-y7hhc074.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-y7hhc074.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0507c7f724fc6486434173e867e70b60 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrqc-11-g459k020.1/nmdc_wfrqc-11-g459k020.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0507c7f724fc6486434173e867e70b60 nmdc:dobj-11-tfnck066 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrqc-11-y7hhc074.1/nmdc_wfrqc-11-y7hhc074.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0507c7f724fc6486434173e867e70b60 nmdc:dobj-11-bfg29734 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g459k020.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c814a61c3b6db425d1be7c1130f7d74a nmdc:wfrqc-11-g459k020.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-y7hhc074.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c814a61c3b6db425d1be7c1130f7d74a nmdc:wfrqc-11-y7hhc074.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-a9bm9657 -INFO:root:New activity id created for nmdc:omprc-11-a9bm9657 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xppe6x73.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-xppe6x73.1 +INFO:root:New activity id created for nmdc:omprc-11-a9bm9657 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-04jhc196.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-04jhc196.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb55be8fa6bd6fbfc25b18d8d3e5f6a2 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-xppe6x73.1/nmdc_wfmgas-11-xppe6x73.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb55be8fa6bd6fbfc25b18d8d3e5f6a2 nmdc:dobj-11-h83jz922 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-04jhc196.1/nmdc_wfmgas-11-04jhc196.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb55be8fa6bd6fbfc25b18d8d3e5f6a2 nmdc:dobj-11-13bmjm78 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xppe6x73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-04jhc196.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9d27e1e5a576e1b05566d9a0d104a4f5 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-xppe6x73.1/nmdc_wfmgas-11-xppe6x73.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a7bfc78ce8d5949459cd1fc1d38a14f nmdc:dobj-11-cyv5qf62 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-04jhc196.1/nmdc_wfmgas-11-04jhc196.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a7bfc78ce8d5949459cd1fc1d38a14f nmdc:dobj-11-aenqtp87 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xppe6x73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-04jhc196.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f088c7e9b432749259d69bd53adaa219 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-xppe6x73.1/nmdc_wfmgas-11-xppe6x73.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f088c7e9b432749259d69bd53adaa219 nmdc:dobj-11-r1fs1x02 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-04jhc196.1/nmdc_wfmgas-11-04jhc196.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f088c7e9b432749259d69bd53adaa219 nmdc:dobj-11-harawt34 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xppe6x73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-04jhc196.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a868f3f8fabbcc34c3151e698428131e -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-xppe6x73.1/nmdc_wfmgas-11-xppe6x73.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a868f3f8fabbcc34c3151e698428131e nmdc:dobj-11-vpj91k98 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-04jhc196.1/nmdc_wfmgas-11-04jhc196.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a868f3f8fabbcc34c3151e698428131e nmdc:dobj-11-n7r3g536 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xppe6x73.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c814a61c3b6db425d1be7c1130f7d74a nmdc:wfmgas-11-xppe6x73.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-04jhc196.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c814a61c3b6db425d1be7c1130f7d74a nmdc:wfmgas-11-04jhc196.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-a9bm9657 -INFO:root:New activity id created for nmdc:omprc-11-a9bm9657 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-rhncej56.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1 +INFO:root:New activity id created for nmdc:omprc-11-a9bm9657 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dcejkv66.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b9fb2a2248fc685d9bc638da2282f3ec -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9fb2a2248fc685d9bc638da2282f3ec nmdc:dobj-11-rj489690 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9fb2a2248fc685d9bc638da2282f3ec nmdc:dobj-11-pn5h2959 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8567bfd74a6af58671e4bf628b8d1f55 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8567bfd74a6af58671e4bf628b8d1f55 nmdc:dobj-11-trfc5w64 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8567bfd74a6af58671e4bf628b8d1f55 nmdc:dobj-11-7t22x067 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:609193d1827fe0bf84b2619482b9516b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:609193d1827fe0bf84b2619482b9516b nmdc:dobj-11-rgp0pa67 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:609193d1827fe0bf84b2619482b9516b nmdc:dobj-11-hehpm232 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bdd0a982ee857564d4a5b2034350745f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdd0a982ee857564d4a5b2034350745f nmdc:dobj-11-ea7v0177 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdd0a982ee857564d4a5b2034350745f nmdc:dobj-11-54jm6n59 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:83c139787bbf71432e75394b91245fbd -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83c139787bbf71432e75394b91245fbd nmdc:dobj-11-v7nb7366 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83c139787bbf71432e75394b91245fbd nmdc:dobj-11-9x4vrj98 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12a138a940e31fb8b2d795f5d96faffe -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12a138a940e31fb8b2d795f5d96faffe nmdc:dobj-11-cwxqry59 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12a138a940e31fb8b2d795f5d96faffe nmdc:dobj-11-cm680875 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:33fc7959840a415b298e740ba687ff1b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33fc7959840a415b298e740ba687ff1b nmdc:dobj-11-jg3c1h26 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33fc7959840a415b298e740ba687ff1b nmdc:dobj-11-dttyg342 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c49776b0c1e9a723028d64765d461dde -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c49776b0c1e9a723028d64765d461dde nmdc:dobj-11-qxph0y95 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c49776b0c1e9a723028d64765d461dde nmdc:dobj-11-8771nq91 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:897f78d77df302e2725502f48a8da32f -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:897f78d77df302e2725502f48a8da32f nmdc:dobj-11-bcdrdg25 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-dcejkv66.1/nmdc_wfrbt-11-dcejkv66.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:897f78d77df302e2725502f48a8da32f nmdc:dobj-11-qsawy670 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c814a61c3b6db425d1be7c1130f7d74a nmdc:wfrbt-11-rhncej56.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dcejkv66.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c814a61c3b6db425d1be7c1130f7d74a nmdc:wfrbt-11-dcejkv66.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a9bm9657 INFO:root:omics_processing_id: nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22afa3d49b73eaec2e9787a6b88fbdc3 nmdc:dobj-11-zg3a0b57 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22afa3d49b73eaec2e9787a6b88fbdc3 nmdc:dobj-11-57bdgq86 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-xzrs8q03 -INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xje7g653.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-xje7g653.1 +INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-c3xdvd49.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-c3xdvd49.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f107af0a000ec0b90e157fc09473c337 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-xje7g653.1/nmdc_wfrqc-11-xje7g653.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f107af0a000ec0b90e157fc09473c337 nmdc:dobj-11-jbwjpp15 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-c3xdvd49.1/nmdc_wfrqc-11-c3xdvd49.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f107af0a000ec0b90e157fc09473c337 nmdc:dobj-11-dm2qsq34 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xje7g653.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-c3xdvd49.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71528f677698dd6657ea7ddcc3105184 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-xje7g653.1/nmdc_wfrqc-11-xje7g653.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71528f677698dd6657ea7ddcc3105184 nmdc:dobj-11-x8yg5422 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-c3xdvd49.1/nmdc_wfrqc-11-c3xdvd49.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71528f677698dd6657ea7ddcc3105184 nmdc:dobj-11-sjn28j09 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xje7g653.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fdefb3fa15098906cf788f5cadf17bb3 nmdc:wfrqc-11-xje7g653.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-c3xdvd49.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fdefb3fa15098906cf788f5cadf17bb3 nmdc:wfrqc-11-c3xdvd49.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-xzrs8q03 -INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-v6fyr976.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1 +INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-cg9xm831.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-cg9xm831.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37573bca240f88091720ae61ae5c9452 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37573bca240f88091720ae61ae5c9452 nmdc:dobj-11-pzf2xk33 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-cg9xm831.1/nmdc_wfmgas-11-cg9xm831.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37573bca240f88091720ae61ae5c9452 nmdc:dobj-11-fcdwxk87 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cg9xm831.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:220c85a9e2d470157aed7a7556f85656 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:220c85a9e2d470157aed7a7556f85656 nmdc:dobj-11-eh58kr58 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-cg9xm831.1/nmdc_wfmgas-11-cg9xm831.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:220c85a9e2d470157aed7a7556f85656 nmdc:dobj-11-j58eyr81 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cg9xm831.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3298d022868e8b0e7cfb783015b93ed -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3298d022868e8b0e7cfb783015b93ed nmdc:dobj-11-h099ww45 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-cg9xm831.1/nmdc_wfmgas-11-cg9xm831.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3298d022868e8b0e7cfb783015b93ed nmdc:dobj-11-vycehq85 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cg9xm831.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fc528f0105fc163876d68df26d35b29 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc528f0105fc163876d68df26d35b29 nmdc:dobj-11-z79cjc40 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-cg9xm831.1/nmdc_wfmgas-11-cg9xm831.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc528f0105fc163876d68df26d35b29 nmdc:dobj-11-xk60j563 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cg9xm831.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da186671c5a581af0a7d195bd857c871 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da186671c5a581af0a7d195bd857c871 nmdc:dobj-11-drpt5d81 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-cg9xm831.1/nmdc_wfmgas-11-cg9xm831.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da186671c5a581af0a7d195bd857c871 nmdc:dobj-11-77bywf96 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:fdefb3fa15098906cf788f5cadf17bb3 nmdc:wfmgas-11-v6fyr976.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cg9xm831.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:fdefb3fa15098906cf788f5cadf17bb3 nmdc:wfmgas-11-cg9xm831.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-xzrs8q03 -INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2xgmaf87.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1 +INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-mm4vem19.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a4ea037d55cc51cf0755a93b39065c8d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4ea037d55cc51cf0755a93b39065c8d nmdc:dobj-11-cd1v4e40 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4ea037d55cc51cf0755a93b39065c8d nmdc:dobj-11-thr7s523 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e5e80996fc502919f163e2d31ecc4a4 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e5e80996fc502919f163e2d31ecc4a4 nmdc:dobj-11-qr5wav26 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e5e80996fc502919f163e2d31ecc4a4 nmdc:dobj-11-vgf4kk96 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5739a086e797487fdaa68c071642442 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5739a086e797487fdaa68c071642442 nmdc:dobj-11-yv30vq09 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5739a086e797487fdaa68c071642442 nmdc:dobj-11-tqt4dm64 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36092d7c1c12826904bc9f9553eba0ae -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36092d7c1c12826904bc9f9553eba0ae nmdc:dobj-11-6q8rg936 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36092d7c1c12826904bc9f9553eba0ae nmdc:dobj-11-3t657y49 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd8140150b0e48fe4362a5913e6b9da2 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd8140150b0e48fe4362a5913e6b9da2 nmdc:dobj-11-x5xvhz14 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd8140150b0e48fe4362a5913e6b9da2 nmdc:dobj-11-zjs5e029 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6af7a12aa288d87b1e9076bb1f68e81e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6af7a12aa288d87b1e9076bb1f68e81e nmdc:dobj-11-167k9021 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6af7a12aa288d87b1e9076bb1f68e81e nmdc:dobj-11-kmczpk02 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5e611fda82e08c4f002a38bc71066fc -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5e611fda82e08c4f002a38bc71066fc nmdc:dobj-11-qppc3b24 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5e611fda82e08c4f002a38bc71066fc nmdc:dobj-11-wb5vqy68 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c192f8b1fe0cd1348659af4d81ec1d48 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c192f8b1fe0cd1348659af4d81ec1d48 nmdc:dobj-11-az1tsz30 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c192f8b1fe0cd1348659af4d81ec1d48 nmdc:dobj-11-6rbcr995 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3453c837bad5cfc5b37ec0f6b40772c7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3453c837bad5cfc5b37ec0f6b40772c7 nmdc:dobj-11-b1yq8e43 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-mm4vem19.1/nmdc_wfrbt-11-mm4vem19.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3453c837bad5cfc5b37ec0f6b40772c7 nmdc:dobj-11-fgpvz334 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-xzrs8q03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fdefb3fa15098906cf788f5cadf17bb3 nmdc:wfrbt-11-2xgmaf87.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mm4vem19.1_kraken2_krona.html 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-jvvmbz87.1/nmdc_wfrbt-11-jvvmbz87.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b4e0bc10933d603310e2d6212bd8368 nmdc:dobj-11-yr6kwh76 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-vbn2j405.1/nmdc_wfrbt-11-vbn2j405.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b4e0bc10933d603310e2d6212bd8368 nmdc:dobj-11-hbewy326 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-99yaxg68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbn2j405.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ab8214f4c30e07cd531a1047382ccdf -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-jvvmbz87.1/nmdc_wfrbt-11-jvvmbz87.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ab8214f4c30e07cd531a1047382ccdf nmdc:dobj-11-1bf7t772 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-vbn2j405.1/nmdc_wfrbt-11-vbn2j405.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ab8214f4c30e07cd531a1047382ccdf nmdc:dobj-11-dmwrtj31 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-99yaxg68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbn2j405.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-jvvmbz87.1/nmdc_wfrbt-11-jvvmbz87.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 nmdc:dobj-11-hptxrj69 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-vbn2j405.1/nmdc_wfrbt-11-vbn2j405.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 nmdc:dobj-11-rejcqp42 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-99yaxg68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fa1a0488d644f315d70f72be2890c210 nmdc:wfrbt-11-jvvmbz87.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbn2j405.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fa1a0488d644f315d70f72be2890c210 nmdc:wfrbt-11-vbn2j405.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-99yaxg68 INFO:root:omics_processing_id: nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:995c8b403d4ae43206bcd9cb0168d7a7 nmdc:dobj-11-tj0apk21 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:995c8b403d4ae43206bcd9cb0168d7a7 nmdc:dobj-11-4zfdve96 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-6xbw1f88 -INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8n3m3s13.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-8n3m3s13.1 +INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-trkvk664.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-trkvk664.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3a37b36f633811e92deca2b8825a5c21 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-8n3m3s13.1/nmdc_wfrqc-11-8n3m3s13.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a37b36f633811e92deca2b8825a5c21 nmdc:dobj-11-e24eak84 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-trkvk664.1/nmdc_wfrqc-11-trkvk664.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a37b36f633811e92deca2b8825a5c21 nmdc:dobj-11-f22jqc47 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8n3m3s13.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-trkvk664.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d98a508ec377e189bf67fcc3431e8b88 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-8n3m3s13.1/nmdc_wfrqc-11-8n3m3s13.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d98a508ec377e189bf67fcc3431e8b88 nmdc:dobj-11-g959ee77 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-trkvk664.1/nmdc_wfrqc-11-trkvk664.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d98a508ec377e189bf67fcc3431e8b88 nmdc:dobj-11-28sp8t10 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8n3m3s13.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfrqc-11-8n3m3s13.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-trkvk664.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfrqc-11-trkvk664.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-6xbw1f88 -INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6ap4gt44.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1 +INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qzkf3m60.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-qzkf3m60.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26026229fd13197a44f11b85645edd43 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26026229fd13197a44f11b85645edd43 nmdc:dobj-11-90vvmq97 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-qzkf3m60.1/nmdc_wfmgas-11-qzkf3m60.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26026229fd13197a44f11b85645edd43 nmdc:dobj-11-zejq5g48 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzkf3m60.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03fc202448c65de6e565ac5692b8dc99 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03fc202448c65de6e565ac5692b8dc99 nmdc:dobj-11-6mbw5f60 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-qzkf3m60.1/nmdc_wfmgas-11-qzkf3m60.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03fc202448c65de6e565ac5692b8dc99 nmdc:dobj-11-q68pfp49 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzkf3m60.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96435c6e9802f9ad5987d851d22abaa0 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96435c6e9802f9ad5987d851d22abaa0 nmdc:dobj-11-ew3nw928 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-qzkf3m60.1/nmdc_wfmgas-11-qzkf3m60.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96435c6e9802f9ad5987d851d22abaa0 nmdc:dobj-11-wcax1937 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzkf3m60.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9345663cca27d20f5657dad69d175d37 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9345663cca27d20f5657dad69d175d37 nmdc:dobj-11-e553f279 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-qzkf3m60.1/nmdc_wfmgas-11-qzkf3m60.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9345663cca27d20f5657dad69d175d37 nmdc:dobj-11-8zqzvw19 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzkf3m60.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc257584ae17f52d32a01e9a1d50c0fd -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc257584ae17f52d32a01e9a1d50c0fd nmdc:dobj-11-fdhhaf23 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-qzkf3m60.1/nmdc_wfmgas-11-qzkf3m60.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc257584ae17f52d32a01e9a1d50c0fd nmdc:dobj-11-rcdcny73 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfmgas-11-6ap4gt44.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzkf3m60.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfmgas-11-qzkf3m60.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-6xbw1f88 -INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-q3fw8c17.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1 +INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-fa5jaj34.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36bd9a52ed3e442caebd9f28f415a941 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36bd9a52ed3e442caebd9f28f415a941 nmdc:dobj-11-4szz1884 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36bd9a52ed3e442caebd9f28f415a941 nmdc:dobj-11-dzkche33 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e37082ea33aa54468afde0c0e6cb59f2 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e37082ea33aa54468afde0c0e6cb59f2 nmdc:dobj-11-xgz2y782 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e37082ea33aa54468afde0c0e6cb59f2 nmdc:dobj-11-pc02bm29 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:428b3ab09a9031d1fbd466c45aaaeca6 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428b3ab09a9031d1fbd466c45aaaeca6 nmdc:dobj-11-jrsa3n26 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428b3ab09a9031d1fbd466c45aaaeca6 nmdc:dobj-11-8vexfr26 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3f5c2553674a92ac266ba10f691fe5e -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3f5c2553674a92ac266ba10f691fe5e nmdc:dobj-11-g2yrea08 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3f5c2553674a92ac266ba10f691fe5e nmdc:dobj-11-38bvgk31 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fb3515d3cd4bc9c971745ad9e5a4408 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fb3515d3cd4bc9c971745ad9e5a4408 nmdc:dobj-11-04z3c256 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fb3515d3cd4bc9c971745ad9e5a4408 nmdc:dobj-11-r44hbj14 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea19d630f32fa0891964ab3bde5f893e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea19d630f32fa0891964ab3bde5f893e nmdc:dobj-11-g1p7kw68 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea19d630f32fa0891964ab3bde5f893e nmdc:dobj-11-8gs88p48 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc700ccae8797c8c7ce770b2210bd290 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc700ccae8797c8c7ce770b2210bd290 nmdc:dobj-11-0kr7fx40 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc700ccae8797c8c7ce770b2210bd290 nmdc:dobj-11-8te7fn28 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f5b9a1d0957b879d0c82e9f2a11914f -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f5b9a1d0957b879d0c82e9f2a11914f nmdc:dobj-11-p08dkb94 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f5b9a1d0957b879d0c82e9f2a11914f nmdc:dobj-11-p4xgnq54 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8787e5f46555ffac92b9a21be6d3a463 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8787e5f46555ffac92b9a21be6d3a463 nmdc:dobj-11-qq2pz859 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-fa5jaj34.1/nmdc_wfrbt-11-fa5jaj34.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8787e5f46555ffac92b9a21be6d3a463 nmdc:dobj-11-fzk4qr56 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfrbt-11-q3fw8c17.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fa5jaj34.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfrbt-11-fa5jaj34.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-6xbw1f88 INFO:root:omics_processing_id: nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:849a332324e4c8e23d5487d866ea8ac3 nmdc:dobj-11-0q9xaa11 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:849a332324e4c8e23d5487d866ea8ac3 nmdc:dobj-11-awdnct89 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-hxcj5q62 -INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-x4ggxb20.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-x4ggxb20.1 +INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hyjagy05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-hyjagy05.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c37ac17298f27be2fb79df5c9fd6cd9e -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-x4ggxb20.1/nmdc_wfrqc-11-x4ggxb20.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c37ac17298f27be2fb79df5c9fd6cd9e nmdc:dobj-11-057drk90 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-hyjagy05.1/nmdc_wfrqc-11-hyjagy05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c37ac17298f27be2fb79df5c9fd6cd9e nmdc:dobj-11-pf33p919 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x4ggxb20.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hyjagy05.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c50be41e97736244d5161d984422a2d -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-x4ggxb20.1/nmdc_wfrqc-11-x4ggxb20.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c50be41e97736244d5161d984422a2d nmdc:dobj-11-se0y5v07 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-hyjagy05.1/nmdc_wfrqc-11-hyjagy05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c50be41e97736244d5161d984422a2d nmdc:dobj-11-781rqz69 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x4ggxb20.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfrqc-11-x4ggxb20.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hyjagy05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfrqc-11-hyjagy05.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-hxcj5q62 -INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7xa15y08.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1 +INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4fwbvn31.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-4fwbvn31.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e0c8d776a3f21d577c5ab013ecbf07c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1/nmdc_wfmgas-11-7xa15y08.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0c8d776a3f21d577c5ab013ecbf07c nmdc:dobj-11-fqctqq44 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-4fwbvn31.1/nmdc_wfmgas-11-4fwbvn31.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0c8d776a3f21d577c5ab013ecbf07c nmdc:dobj-11-2qt78c35 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7xa15y08.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4fwbvn31.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:08c46e594044bd99912767da0ab6c912 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1/nmdc_wfmgas-11-7xa15y08.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08c46e594044bd99912767da0ab6c912 nmdc:dobj-11-hen7n454 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-4fwbvn31.1/nmdc_wfmgas-11-4fwbvn31.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08c46e594044bd99912767da0ab6c912 nmdc:dobj-11-c1gx0a71 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7xa15y08.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4fwbvn31.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8977a29ea63d280856e001d59a74786f -INFO:root:New file path computed for Assembly Coverage Stats: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd615655a16d0631c00edfb1b4794b8a nmdc:dobj-11-me7vgp91 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-2pa5m628.1/nmdc_wfrbt-11-2pa5m628.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd615655a16d0631c00edfb1b4794b8a nmdc:dobj-11-8zbcv205 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2pa5m628.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cbb6016f57f643796497809739dc31c6 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbb6016f57f643796497809739dc31c6 nmdc:dobj-11-j5s3kx39 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-2pa5m628.1/nmdc_wfrbt-11-2pa5m628.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbb6016f57f643796497809739dc31c6 nmdc:dobj-11-06b0zj76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2pa5m628.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59a25ae32482a78fc21a817b4c551da7 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59a25ae32482a78fc21a817b4c551da7 nmdc:dobj-11-fhyc3x56 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-2pa5m628.1/nmdc_wfrbt-11-2pa5m628.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59a25ae32482a78fc21a817b4c551da7 nmdc:dobj-11-e538dh84 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2pa5m628.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6548fd3eb77efb01cdabcfeb8817057f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6548fd3eb77efb01cdabcfeb8817057f nmdc:dobj-11-nn91hh39 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-2pa5m628.1/nmdc_wfrbt-11-2pa5m628.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6548fd3eb77efb01cdabcfeb8817057f nmdc:dobj-11-4mtqq082 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2pa5m628.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c2ff0fa755825ef34d1e16a446a5ae6b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2ff0fa755825ef34d1e16a446a5ae6b nmdc:dobj-11-0cfm4e33 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-2pa5m628.1/nmdc_wfrbt-11-2pa5m628.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2ff0fa755825ef34d1e16a446a5ae6b nmdc:dobj-11-6jyz5002 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2pa5m628.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5818a24d6afb5332a741be700acc060 -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dbc5139e3c05806778ab3450dbcb63ba nmdc:dobj-11-z066pd07 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-2pa5m628.1/nmdc_wfrbt-11-2pa5m628.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dbc5139e3c05806778ab3450dbcb63ba nmdc:dobj-11-pn47ag60 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2pa5m628.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b61b15ddd0a879bede3b73471849a3a4 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b61b15ddd0a879bede3b73471849a3a4 nmdc:dobj-11-53gn2a30 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-2pa5m628.1/nmdc_wfrbt-11-2pa5m628.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b61b15ddd0a879bede3b73471849a3a4 nmdc:dobj-11-hj9ce275 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2pa5m628.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 nmdc:dobj-11-f0gyav98 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-2pa5m628.1/nmdc_wfrbt-11-2pa5m628.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 nmdc:dobj-11-kmd3zy09 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfrbt-11-ebdwjw61.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2pa5m628.1_kraken2_krona.html 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