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"description": "metabat2 bin checkm quality assessment result for gold:Gp0138735", + "data_object_type": "CheckM Statistics" } ], "mags_activity_set": [ @@ -4937,15 +6714,6 @@ "file_size_bytes": 3417438863, "description": "Raw sequencer read data" }, - { - "id": "nmdc:ea8442421f1738797fb1085314cf67e9", - "file_size_bytes": 292, - "md5_checksum": "ea8442421f1738797fb1085314cf67e9", - "name": "gold:Gp0138736_Filtered Stats", - "url": "https://data.microbiomedata.org/data/nmdc:mga0gt36/qa/nmdc_mga0gt36_filterStats.txt", - "description": "Filtered Stats for gold:Gp0138736", - "data_object_type": "QC Statistics" - }, { "id": "nmdc:c35cfb19aa8ab125a2c23506526816ec", "file_size_bytes": 2391589656, @@ -4956,13 +6724,13 @@ "data_object_type": "Filtered Sequencing Reads" }, { - "id": "nmdc:2089bb738e19acf397b874c7ba1ee213", - "file_size_bytes": 2562607646, - "md5_checksum": "2089bb738e19acf397b874c7ba1ee213", - "name": "gold:Gp0138736_Centrifuge classification TSV report", - "url": 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gold:Gp0138736", + "data_object_type": "Centrifuge Krona Plot" }, { "id": "nmdc:b913564fdf48c173240c6cb1d43fab57", @@ -4998,15 +6757,6 @@ "url": "https://data.microbiomedata.org/data/nmdc:mga0gt36/ReadbasedAnalysis/nmdc_mga0gt36_gottcha2_report_full.tsv", "description": "Gottcha2 full TSV report for gold:Gp0138736" }, - { - "id": "nmdc:c4b16136fb23593be83b69ddd5286cbe", - "file_size_bytes": 1324302852, - "md5_checksum": "c4b16136fb23593be83b69ddd5286cbe", - "name": "gold:Gp0138736_Kraken classification TSV report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0gt36/ReadbasedAnalysis/nmdc_mga0gt36_kraken2_classification.tsv", - "description": "Kraken classification TSV report for gold:Gp0138736", - "data_object_type": "Kraken2 Taxonomic Classification" - }, { "id": "nmdc:1e1bb5efcfd144d7da2bc8e2578c3674", "file_size_bytes": 228435, @@ -5016,6 +6766,24 @@ "description": "Gottcha2 Krona HTML report for gold:Gp0138736", "data_object_type": "GOTTCHA2 Krona Plot" }, + { + "id": 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8.41, + "bin_name": "bins.36", + "gene_count": 415, "bin_quality": "LQ", "gtdbtk_species": "", "gtdbtk_order": "", @@ -28415,29 +29899,10 @@ "num_t_rna": 1 }, { - "number_of_contig": 45, - "completeness": 16.85, - "bin_name": "bins.16", - "gene_count": 214, - "bin_quality": "LQ", - "gtdbtk_species": "", - "gtdbtk_order": "", - "num_16s": 0, - "gtdbtk_family": "", - "gtdbtk_domain": "", - "contamination": 0.0, - "gtdbtk_class": "", - "gtdbtk_phylum": "", - "num_5s": 0, - "num_23s": 0, - "gtdbtk_genus": "", - "num_t_rna": 0 - }, - { - "number_of_contig": 76, - "completeness": 16.38, - "bin_name": "bins.38", - "gene_count": 382, + "number_of_contig": 189, + "completeness": 8.28, + "bin_name": "bins.24", + "gene_count": 1962, "bin_quality": "LQ", "gtdbtk_species": "", "gtdbtk_order": "", @@ -28448,15 +29913,15 @@ "gtdbtk_class": "", "gtdbtk_phylum": "", "num_5s": 0, - "num_23s": 0, + "num_23s": 1, "gtdbtk_genus": "", - "num_t_rna": 2 + "num_t_rna": 16 }, { - "number_of_contig": 133, - 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gold:Gp0213370", + "data_object_type": "Assembly Contigs" }, { - "id": "nmdc:7498ad8e88b071a3ebab9f911eb43dd9", - "file_size_bytes": 147324470, - "md5_checksum": "7498ad8e88b071a3ebab9f911eb43dd9", - "name": "gold:Gp0213370_PFAM GFF file", - "url": "https://data.microbiomedata.org/data/nmdc:mga0sg75/annotation/nmdc_mga0sg75_pfam.gff", - "description": "PFAM GFF file for gold:Gp0213370" + "id": "nmdc:1f6763c8022761b11e243c22d399eb76", + "file_size_bytes": 185511017, + "md5_checksum": "1f6763c8022761b11e243c22d399eb76", + "name": "gold:Gp0213370_Cath FunFam GFF file", + "url": "https://data.microbiomedata.org/data/nmdc:mga0sg75/annotation/nmdc_mga0sg75_cath_funfam.gff", + "description": "Cath FunFam GFF file for gold:Gp0213370" }, { "id": "nmdc:fe6d23ca26263913bfa5bc42e557789e", @@ -113430,12 +131438,20 @@ "description": "SuperFam GFF file for gold:Gp0213370" }, { - "id": "nmdc:0b0396569882306cec3167123aaaf42e", - "file_size_bytes": 309822, - "md5_checksum": 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Sequencing Reads" }, + { + "id": "nmdc:d98a508ec377e189bf67fcc3431e8b88", + "file_size_bytes": 280, + "md5_checksum": "d98a508ec377e189bf67fcc3431e8b88", + "name": "gold:Gp0213372_Filtered Stats", + "url": "https://data.microbiomedata.org/data/nmdc:mga0ap42/qa/nmdc_mga0ap42_filterStats.txt", + "description": "Filtered Stats for gold:Gp0213372", + "data_object_type": "QC Statistics" + }, { "id": "nmdc:3fb3515d3cd4bc9c971745ad9e5a4408", "file_size_bytes": 260356, @@ -126815,15 +145250,6 @@ "description": "Gottcha2 Krona HTML report for gold:Gp0213372", "data_object_type": "GOTTCHA2 Krona Plot" }, - { - "id": "nmdc:ea19d630f32fa0891964ab3bde5f893e", - "file_size_bytes": 2348346, - "md5_checksum": "ea19d630f32fa0891964ab3bde5f893e", - "name": "gold:Gp0213372_Centrifuge Krona HTML report", - "url": "https://data.microbiomedata.org/data/nmdc:mga0ap42/ReadbasedAnalysis/nmdc_mga0ap42_centrifuge_krona.html", - "description": "Centrifuge Krona HTML report for gold:Gp0213372", - 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"omics_type": { "has_raw_value": "Metatranscriptome" - } + }, + "has_output": [ + "nmdc:81179f0a1b0a2a6431ba6b8ab02b0191" + ] } ], "read_qc_analysis_activity_set": [ @@ -2933,6 +2942,14 @@ }, { "data_object_set": [ + { + "id": "nmdc:eacaebfb5cdb318f3d0d5b576f437bd3", + "file_size_bytes": 7863545491, + "md5_checksum": "eacaebfb5cdb318f3d0d5b576f437bd3", + "name": "gold:Gp0208352_Filtered Reads", + "url": "https://data.microbiomedata.org/data/nmdc_mta04n39/qa/nmdc_mta04n39.anqdpht.fastq.gz", + "description": "Filtered Reads for gold:Gp0208352" + }, { "id": "nmdc:5d0e5c5938464e83276f50ccf2486b64", "file_size_bytes": 291, @@ -2942,14 +2959,6 @@ "description": "Filtered Stats for gold:Gp0208352", "data_object_type": "QC Statistics" }, - { - "id": "nmdc:eacaebfb5cdb318f3d0d5b576f437bd3", - "file_size_bytes": 7863545491, - "md5_checksum": "eacaebfb5cdb318f3d0d5b576f437bd3", - "name": "gold:Gp0208352_Filtered Reads", - "url": 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gold:Gp0208352" }, { "id": "nmdc:5680ff887d7dc52ed7c9900b753cbae5", @@ -3145,14 +3162,6 @@ "name": "gold:Gp0208352_Sense RPKM", "url": "https://data.microbiomedata.org/data/nmdc_mta04n39/metat_output/nmdc_mta04n39_sense_out.json", "description": "Sense RPKM for gold:Gp0208352" - }, - { - "id": "nmdc:4eed4f388b380739686e118731d052a7", - "file_size_bytes": 172869222, - "md5_checksum": "4eed4f388b380739686e118731d052a7", - "name": "gold:Gp0208352_Anstisense RPKM", - "url": "https://data.microbiomedata.org/data/nmdc_mta04n39/metat_output/nmdc_mta04n39_antisense_out.json", - "description": "Anstisense RPKM for gold:Gp0208352" } ], "metagenome_annotation_activity_set": [ @@ -3347,7 +3356,10 @@ "ncbi_project_name": "Metatranscriptome of peatland microbial communities from MTU Mesocosm Facility, Houghton, MI, USA - PEATcosm2014_Bin10_30_metaT", "omics_type": { "has_raw_value": "Metatranscriptome" - } + }, + "has_output": [ + "nmdc:1cf305c52557833542ef65965b21036b" + ] } ], 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file for gold:Gp0208356" + }, + { + "id": "nmdc:baa368a4524eac2f52e707dc8ba1bae7", + "file_size_bytes": 3429608, + "md5_checksum": "baa368a4524eac2f52e707dc8ba1bae7", + "name": "gold:Gp0208356_RFAM rRNA GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0jh65/annotation/nmdc_mta0jh65_rfam_rrna.gff", + "description": "RFAM rRNA GFF file for gold:Gp0208356" + }, { "id": "nmdc:ec40248b6c5214211972a31d32d76dbc", "file_size_bytes": 53999102, @@ -4055,20 +4004,78 @@ "description": "Genemark GFF file for gold:Gp0208356" }, { - "id": "nmdc:8998233dc979f5dfb7de4b5443fda09a", - "file_size_bytes": 488858, - "md5_checksum": "8998233dc979f5dfb7de4b5443fda09a", - "name": "gold:Gp0208356_tRNA GFF File", - "url": "https://data.microbiomedata.org/data/nmdc_mta0jh65/annotation/nmdc_mta0jh65_trna.gff", - "description": "tRNA GFF File for gold:Gp0208356" + "id": "nmdc:9517e0185d22e097dde35b60b66968e7", + "file_size_bytes": 4605571, + "md5_checksum": "9517e0185d22e097dde35b60b66968e7", + 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"data_object_type": "Annotation Enzyme Commission" + "id": "nmdc:d985123a58e6659ffd6500cea7e240a8", + "file_size_bytes": 1242300, + "md5_checksum": "d985123a58e6659ffd6500cea7e240a8", + "name": "gold:Gp0208351_RFAM rmRNA GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0tg76/annotation/nmdc_mta0tg76_rfam_ncrna_tmrna.gff", + "description": "RFAM rmRNA GFF file for gold:Gp0208351" }, { - "id": "nmdc:af985bd51815d58c7fad1ac30fa5e16a", - "file_size_bytes": 64174649, - "md5_checksum": "af985bd51815d58c7fad1ac30fa5e16a", - "name": "gold:Gp0208351_KO_EC GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0tg76/annotation/nmdc_mta0tg76_ko_ec.gff", - "description": "KO_EC GFF file for gold:Gp0208351" + "id": "nmdc:4edd4cf498fcaf7de58f33f21df77ff0", + "file_size_bytes": 19589118, + "md5_checksum": "4edd4cf498fcaf7de58f33f21df77ff0", + "name": "gold:Gp0208351_KO TSV file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0tg76/annotation/nmdc_mta0tg76_ko.tsv", + "description": "KO TSV file for gold:Gp0208351", + "data_object_type": "Annotation KEGG Orthology" }, { "id": "nmdc:8c4cb9a4d0c7d5a085add7f8a84f5672", @@ -4476,12 +4438,44 @@ "description": "RFAM rRNA GFF file for gold:Gp0208351" }, { - "id": "nmdc:f4fed77a7455a09176453d174074cd55", - "file_size_bytes": 116371204, - "md5_checksum": "f4fed77a7455a09176453d174074cd55", - "name": "gold:Gp0208351_SuperFam GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0tg76/annotation/nmdc_mta0tg76_supfam.gff", - "description": "SuperFam GFF file for gold:Gp0208351" + "id": "nmdc:39005f30e08c4dda38573de0fc87e910", + "file_size_bytes": 27630899, + "md5_checksum": "39005f30e08c4dda38573de0fc87e910", + "name": "gold:Gp0208351_SMART GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0tg76/annotation/nmdc_mta0tg76_smart.gff", + "description": "SMART GFF file for gold:Gp0208351" + }, + { + "id": "nmdc:af985bd51815d58c7fad1ac30fa5e16a", + "file_size_bytes": 64174649, + 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gold:Gp0208351", "data_object_type": "Functional Annotation GFF" }, + { + "id": "nmdc:2384185a82ec0a0e1395562eeb3b3f0b", + "file_size_bytes": 13482137, + "md5_checksum": "2384185a82ec0a0e1395562eeb3b3f0b", + "name": "gold:Gp0208351_TigrFam GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0tg76/annotation/nmdc_mta0tg76_tigrfam.gff", + "description": "TigrFam GFF file for gold:Gp0208351" + }, + { + "id": "nmdc:0e76af51c0f224f2f5e81542adf298dd", + "file_size_bytes": 207340264, + "md5_checksum": "0e76af51c0f224f2f5e81542adf298dd", + "name": "gold:Gp0208351_Prodigal GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0tg76/annotation/nmdc_mta0tg76_prodigal.gff", + "description": "Prodigal GFF file for gold:Gp0208351" + }, + { + "id": "nmdc:1120d8feb888587f8b69ba57c9b0443e", + "file_size_bytes": 119741, + "md5_checksum": "1120d8feb888587f8b69ba57c9b0443e", + "name": "gold:Gp0208351_CRISPRS file", + "url": 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+ { + "id": "nmdc:46aa02710cb6a87d5be6de7dd55eed3e", + "file_size_bytes": 3325137, + "md5_checksum": "46aa02710cb6a87d5be6de7dd55eed3e", + "name": "gold:Gp0208349_RFAM rRNA GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0dy21/annotation/nmdc_mta0dy21_rfam_rrna.gff", + "description": "RFAM rRNA GFF file for gold:Gp0208349" }, { "id": "nmdc:a7c5f384baa013b730d2e6093ff88a8f", @@ -7280,13 +7284,20 @@ "data_object_type": "Structural Annotation GFF" }, { - "id": "nmdc:87703451501d0882cdf1a44898d33a45", - "file_size_bytes": 12435873, - "md5_checksum": "87703451501d0882cdf1a44898d33a45", - "name": "gold:Gp0208349_KO TSV file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0dy21/annotation/nmdc_mta0dy21_ko.tsv", - "description": "KO TSV file for gold:Gp0208349", - "data_object_type": "Annotation KEGG Orthology" + "id": "nmdc:09a0856b1629aea54ce8576bbbd5f430", + "file_size_bytes": 842655, + "md5_checksum": "09a0856b1629aea54ce8576bbbd5f430", + "name": 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"has_raw_value": "Metatranscriptome" - } + }, + "has_output": [ + "nmdc:ad10a5361539089a3381aa196fb89744" + ] } ], "read_qc_analysis_activity_set": [ @@ -7553,14 +7592,6 @@ }, { "data_object_set": [ - { - "id": "nmdc:ef5f9738c3612c740e2fbf391044aa5b", - "file_size_bytes": 8157361459, - "md5_checksum": "ef5f9738c3612c740e2fbf391044aa5b", - "name": "gold:Gp0208357_Filtered Reads", - "url": "https://data.microbiomedata.org/data/nmdc_mta0dx24/qa/nmdc_mta0dx24.anqdpht.fastq.gz", - "description": "Filtered Reads for gold:Gp0208357" - }, { "id": "nmdc:3628a9a93ecf059328ec403634155cce", "file_size_bytes": 294, @@ -7570,6 +7601,14 @@ "description": "Filtered Stats for gold:Gp0208357", "data_object_type": "QC Statistics" }, + { + "id": "nmdc:ef5f9738c3612c740e2fbf391044aa5b", + "file_size_bytes": 8157361459, + "md5_checksum": "ef5f9738c3612c740e2fbf391044aa5b", + "name": "gold:Gp0208357_Filtered Reads", + "url": 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gold:Gp0208357", + "data_object_type": "Structural Annotation GFF" }, { "id": "nmdc:809065700dde302d6a61064d10b2b2cc", @@ -7604,46 +7644,28 @@ "description": "PFAM GFF file for gold:Gp0208357" }, { - "id": "nmdc:82a55e2a9ff718fe6b6655e309762f5d", - "file_size_bytes": 8501131, - "md5_checksum": "82a55e2a9ff718fe6b6655e309762f5d", - "name": "gold:Gp0208357_EC TSV file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0dx24/annotation/nmdc_mta0dx24_ec.tsv", - "description": "EC TSV file for gold:Gp0208357", - "data_object_type": "Annotation Enzyme Commission" - }, - { - "id": "nmdc:f20279ab74d85c580dd9b21e274bd535", - "file_size_bytes": 53030720, - "md5_checksum": "f20279ab74d85c580dd9b21e274bd535", - "name": "gold:Gp0208357_KO_EC GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0dx24/annotation/nmdc_mta0dx24_ko_ec.gff", - "description": "KO_EC GFF file for gold:Gp0208357" - }, - { - "id": "nmdc:f2b5a14ab6c0f2dc446fe168a4229468", - "file_size_bytes": 159547937, - 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rmRNA GFF file for gold:Gp0208357" + "id": "nmdc:b98b737a52de2cb08d141a62df131c3a", + "file_size_bytes": 158146, + "md5_checksum": "b98b737a52de2cb08d141a62df131c3a", + "name": "gold:Gp0208357_CRT GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0dx24/annotation/nmdc_mta0dx24_crt.gff", + "description": "CRT GFF file for gold:Gp0208357" }, { - "id": "nmdc:2ac7b52005d8bb30fe3e9ea62fa809ab", - "file_size_bytes": 193547000, - "md5_checksum": "2ac7b52005d8bb30fe3e9ea62fa809ab", - "name": "gold:Gp0208357_Prodigal GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta0dx24/annotation/nmdc_mta0dx24_prodigal.gff", - "description": "Prodigal GFF file for gold:Gp0208357" + "id": "nmdc:6bd7c1829029bf1c0f47bc85e9945f20", + "file_size_bytes": 84269759, + "md5_checksum": "6bd7c1829029bf1c0f47bc85e9945f20", + "name": "gold:Gp0208357_Cath FunFam GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta0dx24/annotation/nmdc_mta0dx24_cath_funfam.gff", + 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from MTU Mesocosm Facility, Houghton, MI, USA - PEATcosm2014_Bin23_10_metaT", "omics_type": { "has_raw_value": "Metatranscriptome" - } + }, + "has_output": [ + "nmdc:38c3efee7e89f8a0a298226246b956c3" + ] } ], "read_qc_analysis_activity_set": [ @@ -8015,6 +8057,14 @@ }, { "data_object_set": [ + { + "id": "nmdc:566cc849f80d611c0a00d63a1908af88", + "file_size_bytes": 7854505288, + "md5_checksum": "566cc849f80d611c0a00d63a1908af88", + "name": "gold:Gp0208345_Filtered Reads", + "url": "https://data.microbiomedata.org/data/nmdc_mta00292/qa/nmdc_mta00292.anqdpht.fastq.gz", + "description": "Filtered Reads for gold:Gp0208345" + }, { "id": "nmdc:72af5ce2a69b702d8f2d37596aa13a80", "file_size_bytes": 291, @@ -8024,14 +8074,6 @@ "description": "Filtered Stats for gold:Gp0208345", "data_object_type": "QC Statistics" }, - { - "id": "nmdc:566cc849f80d611c0a00d63a1908af88", - "file_size_bytes": 7854505288, - "md5_checksum": "566cc849f80d611c0a00d63a1908af88", - "name": "gold:Gp0208345_Filtered Reads", 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+ "description": "RFAM misc binding GFF file for gold:Gp0208345" + }, { "id": "nmdc:8a4e682e5df809689438bb53e6653408", "file_size_bytes": 6101489, @@ -8075,28 +8133,20 @@ "data_object_type": "Annotation Enzyme Commission" }, { - "id": "nmdc:99d2a81cfbb0c533a153e01d3349c3ce", - "file_size_bytes": 101393824, - "md5_checksum": "99d2a81cfbb0c533a153e01d3349c3ce", - "name": "gold:Gp0208345_Genemark GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta00292/annotation/nmdc_mta00292_genemark.gff", - "description": "Genemark GFF file for gold:Gp0208345" - }, - { - "id": "nmdc:906abffa3f36f9041f062630da68d950", - "file_size_bytes": 78473464, - "md5_checksum": "906abffa3f36f9041f062630da68d950", - "name": "gold:Gp0208345_SuperFam GFF file", - "url": "https://data.microbiomedata.org/data/nmdc_mta00292/annotation/nmdc_mta00292_supfam.gff", - "description": "SuperFam GFF file for gold:Gp0208345" + "id": "nmdc:ab14d09a2602e6981ef4ebf38b416d09", + "file_size_bytes": 153811074, + 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annotation GFF file for gold:Gp0208345", + "data_object_type": "Structural Annotation GFF" + }, + { + "id": "nmdc:522640d449c649ace7ed55d3354a6285", + "file_size_bytes": 114639828, + "md5_checksum": "522640d449c649ace7ed55d3354a6285", + "name": "gold:Gp0208345_Protein FAA", + "url": "https://data.microbiomedata.org/data/nmdc_mta00292/annotation/nmdc_mta00292.faa", + "description": "Protein FAA for gold:Gp0208345" + }, + { + "id": "nmdc:f1250b9e4a1a0e530df60fc1324d9a0c", + "file_size_bytes": 158582, + "md5_checksum": "f1250b9e4a1a0e530df60fc1324d9a0c", + "name": "gold:Gp0208345_CRT GFF file", + "url": "https://data.microbiomedata.org/data/nmdc_mta00292/annotation/nmdc_mta00292_crt.gff", + "description": "CRT GFF file for gold:Gp0208345" }, { "id": "nmdc:7336e18ce9f6e4569688eaed17e51d83", @@ -8172,22 +8214,6 @@ "description": "Functional annotation GFF file for gold:Gp0208345", "data_object_type": "Functional Annotation GFF" }, - { - "id": "nmdc:ab14d09a2602e6981ef4ebf38b416d09", - 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MN, USA - PEATcosm2014_Bin02_30_metaG", @@ -9237,7 +11517,7 @@ ], "read_qc_analysis_activity_set": [ { - "id": "nmdc:wfrqc-11-c99f1x15.1", + "id": "nmdc:wfrqc-11-vcrpkc87.1", "name": "Read QC Activity for nmdc:omprc-11-62am2h65", "started_at_time": "2021-08-11T00:36:30+00:00", "ended_at_time": "2021-11-24T09:30:05+00:00", @@ -9245,11 +11525,11 @@ "execution_resource": "NERSC-Cori", "git_url": "https://github.com/microbiomedata/ReadsQC", "has_input": [ - "nmdc:dobj-11-5d8zfk15" + "nmdc:dobj-11-txr00q86" ], "has_output": [ - "nmdc:dobj-11-36f95h90", - "nmdc:dobj-11-21mkbk85" + "nmdc:dobj-11-nfqzd067", + "nmdc:dobj-11-zyd0f655" ], "type": "nmdc:ReadQcAnalysisActivity", "part_of": [ @@ -9264,7 +11544,7 @@ ], "read_based_taxonomy_analysis_activity_set": [ { - "id": "nmdc:wfrbt-11-b5yn7821.1", + "id": "nmdc:wfrbt-11-vvef1x51.1", "name": "Readbased Taxonomy Analysis Activity for nmdc:omprc-11-62am2h65", "started_at_time": "2021-08-11T00:36:30+00:00", "ended_at_time": 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Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2215js37/nmdc:wfmgas-11-83n00450.1/nmdc_wfmgas-11-83n00450.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b6c580fa3b89a237ed78aed65ba7d94 nmdc:dobj-11-mjddvr94 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-2215js37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83n00450.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:8819c871fff956f27a847055f8e943d2 nmdc:wfmgas-11-83n00450.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-2215js37 +INFO:root:New activity id created for nmdc:omprc-11-2215js37 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2m98t130.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2215js37/nmdc:wfrbt-11-2m98t130.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-2215js37/nmdc:wfrbt-11-2m98t130.1/nmdc_wfrbt-11-2m98t130.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1d902ea8791a103c9df085481bdd6da nmdc:dobj-11-0a51t634 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-2215js37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2m98t130.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93afebc2cf88de3f0cc904a037226650 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2215js37/nmdc:wfrbt-11-2m98t130.1/nmdc_wfrbt-11-2m98t130.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93afebc2cf88de3f0cc904a037226650 nmdc:dobj-11-4n9z2642 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-2215js37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2m98t130.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eec882650d010c19af9b40c51155f183 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2215js37/nmdc:wfrbt-11-2m98t130.1/nmdc_wfrbt-11-2m98t130.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eec882650d010c19af9b40c51155f183 nmdc:dobj-11-2vr50j56 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-2215js37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2m98t130.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:331758f55146d415a65ea585cb07e6f1 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2215js37/nmdc:wfrbt-11-2m98t130.1/nmdc_wfrbt-11-2m98t130.1_kraken2_classification.tsv 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nmdc:omprc-11-mbvmwv28 +INFO:root:New activity id created for nmdc:omprc-11-mbvmwv28 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8jm9hr68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrqc-11-8jm9hr68.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c587b01c7f8d336627cc79bca70c916d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrqc-11-8jm9hr68.1/nmdc_wfrqc-11-8jm9hr68.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c587b01c7f8d336627cc79bca70c916d nmdc:dobj-11-2g2ksd39 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8jm9hr68.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0489bde713acadcb75979a3aee42546 +INFO:root:New file path computed for QC Statistics: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfmgas-11-ndewb489.1/nmdc_wfmgas-11-ndewb489.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a63f679d563172b92a197b4af6174a17 nmdc:dobj-11-wez5xf86 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ndewb489.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c762dfb793f282f8d9693280b5033724 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfmgas-11-ndewb489.1/nmdc_wfmgas-11-ndewb489.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c762dfb793f282f8d9693280b5033724 nmdc:dobj-11-mdn9rj18 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ndewb489.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b281b2ba98a8e75838ec71b6a59c36c5 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfmgas-11-ndewb489.1/nmdc_wfmgas-11-ndewb489.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b281b2ba98a8e75838ec71b6a59c36c5 nmdc:dobj-11-0vbcq904 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ndewb489.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7fac49f0fdb60a5b169d8e5d3fbb04dc +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfmgas-11-ndewb489.1/nmdc_wfmgas-11-ndewb489.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fac49f0fdb60a5b169d8e5d3fbb04dc nmdc:dobj-11-tqy73426 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrbt-11-6f3s4a24.1/nmdc_wfrbt-11-6f3s4a24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ba805033a443245468f7188b190facc nmdc:dobj-11-456sfv23 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6f3s4a24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0a8d5cc4034dc8947b79877f57e6ca3 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrbt-11-6f3s4a24.1/nmdc_wfrbt-11-6f3s4a24.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0a8d5cc4034dc8947b79877f57e6ca3 nmdc:dobj-11-0hjhdq88 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6f3s4a24.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65a51073f8096f8280967d35839e3f91 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrbt-11-6f3s4a24.1/nmdc_wfrbt-11-6f3s4a24.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65a51073f8096f8280967d35839e3f91 nmdc:dobj-11-0zctzb48 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6f3s4a24.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e6b8f2e96081e54427c1b77ae1825c4 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrbt-11-6f3s4a24.1/nmdc_wfrbt-11-6f3s4a24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e6b8f2e96081e54427c1b77ae1825c4 nmdc:dobj-11-0hr39k69 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6f3s4a24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:afc7ef2e0c8aa6f57ff4a400dceab222 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrbt-11-6f3s4a24.1/nmdc_wfrbt-11-6f3s4a24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afc7ef2e0c8aa6f57ff4a400dceab222 nmdc:dobj-11-96egwz83 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6f3s4a24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72e1d84515968950764bbe6b62557b02 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrbt-11-6f3s4a24.1/nmdc_wfrbt-11-6f3s4a24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72e1d84515968950764bbe6b62557b02 nmdc:dobj-11-k3hapy67 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6f3s4a24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f6a0acc06f62e240d5ffbfbf995bb59 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrbt-11-6f3s4a24.1/nmdc_wfrbt-11-6f3s4a24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f6a0acc06f62e240d5ffbfbf995bb59 nmdc:dobj-11-8w40qp09 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6f3s4a24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fb76e7dc4c6239d9874d58fdc6f517b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mbvmwv28/nmdc:wfrbt-11-6f3s4a24.1/nmdc_wfrbt-11-6f3s4a24.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fb76e7dc4c6239d9874d58fdc6f517b nmdc:dobj-11-dx3vay18 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-mbvmwv28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6f3s4a24.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:219d812551f243e00a4a64870e700ac6 nmdc:wfrbt-11-6f3s4a24.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-mbvmwv28 +INFO:root:omics_processing_id: nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0941f80a9f52f40feeba2733f7dea1ad nmdc:dobj-11-7kkxf797 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-pgtgvr67 +INFO:root:New activity id created for nmdc:omprc-11-pgtgvr67 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sz2wby33.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrqc-11-sz2wby33.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29f9ffc849f1a0c04ac3e761531989d8 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrqc-11-sz2wby33.1/nmdc_wfrqc-11-sz2wby33.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29f9ffc849f1a0c04ac3e761531989d8 nmdc:dobj-11-w8b07f96 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sz2wby33.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03767f108eca06a90ab3ae014a5dee2f +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrqc-11-sz2wby33.1/nmdc_wfrqc-11-sz2wby33.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03767f108eca06a90ab3ae014a5dee2f nmdc:dobj-11-893r3b11 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sz2wby33.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:56c6d70b9ca166f9347fec0f4b0f3a96 nmdc:wfrqc-11-sz2wby33.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-pgtgvr67 +INFO:root:New activity id created for nmdc:omprc-11-pgtgvr67 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-m29ghk73.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfmgas-11-m29ghk73.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22a3c11a7360ff2a77d4c661ebeec256 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfmgas-11-m29ghk73.1/nmdc_wfmgas-11-m29ghk73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22a3c11a7360ff2a77d4c661ebeec256 nmdc:dobj-11-mywpnf27 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m29ghk73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:515f1149424950eb968fcfe6a970bbf1 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfmgas-11-m29ghk73.1/nmdc_wfmgas-11-m29ghk73.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:515f1149424950eb968fcfe6a970bbf1 nmdc:dobj-11-zz8t5t44 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m29ghk73.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d2e829924ad1f3e6e1c3b1ead3332caa +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfmgas-11-m29ghk73.1/nmdc_wfmgas-11-m29ghk73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2e829924ad1f3e6e1c3b1ead3332caa nmdc:dobj-11-70rgtv50 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m29ghk73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f2ffd380fd02083392a0972324cd7015 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfmgas-11-m29ghk73.1/nmdc_wfmgas-11-m29ghk73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2ffd380fd02083392a0972324cd7015 nmdc:dobj-11-bk8df491 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m29ghk73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4cacfe6aff90b0fca935d3f12a0c3a24 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfmgas-11-m29ghk73.1/nmdc_wfmgas-11-m29ghk73.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4cacfe6aff90b0fca935d3f12a0c3a24 nmdc:dobj-11-zeb59n53 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m29ghk73.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:56c6d70b9ca166f9347fec0f4b0f3a96 nmdc:wfmgas-11-m29ghk73.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-pgtgvr67 +INFO:root:New activity id created for nmdc:omprc-11-pgtgvr67 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8mcfaa21.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b18aa8828e8a209683ee73e6438e8f2c +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b18aa8828e8a209683ee73e6438e8f2c nmdc:dobj-11-950d5968 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b4fd68e9200bd7cfa27958c2a48f71c7 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b4fd68e9200bd7cfa27958c2a48f71c7 nmdc:dobj-11-xb04nr54 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcd27945994efa2ef2a3aa03125f0939 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcd27945994efa2ef2a3aa03125f0939 nmdc:dobj-11-0cjrb760 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:af1662698b0e23dc7a3cb4e3663d8a00 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:af1662698b0e23dc7a3cb4e3663d8a00 nmdc:dobj-11-em6drg53 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93510feae5ede49abda804d9fc5eaef3 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93510feae5ede49abda804d9fc5eaef3 nmdc:dobj-11-38mj0j22 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a6805ec107ea8e6bc7e36a74c1f2a4e7 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6805ec107ea8e6bc7e36a74c1f2a4e7 nmdc:dobj-11-k4x9ay71 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2490e0609d83f037e28c15b4cb2d1a94 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2490e0609d83f037e28c15b4cb2d1a94 nmdc:dobj-11-w07a0a61 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e473dbee796e4716b74d7f1359e91d2c +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e473dbee796e4716b74d7f1359e91d2c nmdc:dobj-11-cz3k5k39 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2239f32f7702e7c29529285ddbc224b5 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pgtgvr67/nmdc:wfrbt-11-8mcfaa21.1/nmdc_wfrbt-11-8mcfaa21.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2239f32f7702e7c29529285ddbc224b5 nmdc:dobj-11-sdfjgw71 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-pgtgvr67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8mcfaa21.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:56c6d70b9ca166f9347fec0f4b0f3a96 nmdc:wfrbt-11-8mcfaa21.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-pgtgvr67 +INFO:root:omics_processing_id: nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0e8b1da1dffe72e1eaeb6648c8e97b1 nmdc:dobj-11-dv12q995 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5va67478 +INFO:root:New activity id created for nmdc:omprc-11-5va67478 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-60c00006.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrqc-11-60c00006.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74f40182eca5df10287d437b89a6d27d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrqc-11-60c00006.1/nmdc_wfrqc-11-60c00006.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74f40182eca5df10287d437b89a6d27d nmdc:dobj-11-ebanhx59 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-60c00006.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6bceeca0c933b1b6372e867b37e95b5a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrqc-11-60c00006.1/nmdc_wfrqc-11-60c00006.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6bceeca0c933b1b6372e867b37e95b5a nmdc:dobj-11-m86vx224 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-60c00006.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d132f3e5312875f4c16ec846d6d9b6c9 nmdc:wfrqc-11-60c00006.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5va67478 +INFO:root:New activity id created for nmdc:omprc-11-5va67478 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ck40g060.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfmgas-11-ck40g060.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8eaf3c2bb228631c6960dc38fde6b81 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfmgas-11-ck40g060.1/nmdc_wfmgas-11-ck40g060.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8eaf3c2bb228631c6960dc38fde6b81 nmdc:dobj-11-t39zvp87 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ck40g060.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f8ae89d57c98fbd044fd238bbbeb122 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfmgas-11-ck40g060.1/nmdc_wfmgas-11-ck40g060.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f8ae89d57c98fbd044fd238bbbeb122 nmdc:dobj-11-22z5qq19 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ck40g060.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:baf66f63614eb21383d712a42a475042 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfmgas-11-ck40g060.1/nmdc_wfmgas-11-ck40g060.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baf66f63614eb21383d712a42a475042 nmdc:dobj-11-8q27nd46 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ck40g060.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c265309faa192d2ff6e372cc55b49efc +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfmgas-11-ck40g060.1/nmdc_wfmgas-11-ck40g060.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c265309faa192d2ff6e372cc55b49efc nmdc:dobj-11-63v3f582 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ck40g060.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4bf8281d870e2699446e9673f4bddc63 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfmgas-11-ck40g060.1/nmdc_wfmgas-11-ck40g060.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4bf8281d870e2699446e9673f4bddc63 nmdc:dobj-11-96tqn459 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ck40g060.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d132f3e5312875f4c16ec846d6d9b6c9 nmdc:wfmgas-11-ck40g060.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-5va67478 +INFO:root:New activity id created for nmdc:omprc-11-5va67478 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vaww0a33.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4663aec9aa0e60748c90dca8ad565903 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4663aec9aa0e60748c90dca8ad565903 nmdc:dobj-11-3rbyfm29 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62324aa19f7928f0d87733f22ee18c11 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62324aa19f7928f0d87733f22ee18c11 nmdc:dobj-11-f400jy44 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e2cd932e18c03a87bb05b133b5a8e7e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e2cd932e18c03a87bb05b133b5a8e7e nmdc:dobj-11-qx5vps19 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d2f9638a539460afedd392dcaf8e5775 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2f9638a539460afedd392dcaf8e5775 nmdc:dobj-11-xbpmfp08 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d9104a1ae29a7c186501d34f3d11280 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d9104a1ae29a7c186501d34f3d11280 nmdc:dobj-11-bkbca325 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b0c11cbca5df6ad0083256178dab5e0 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b0c11cbca5df6ad0083256178dab5e0 nmdc:dobj-11-3fhv7x93 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd4ea971b43bf80f244e57c5ea6ff2a2 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd4ea971b43bf80f244e57c5ea6ff2a2 nmdc:dobj-11-cp8tae36 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed2c195f76f22835239ab98a49d908de +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed2c195f76f22835239ab98a49d908de nmdc:dobj-11-0yaf9q33 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8032cf624748e74a812149ddcc7b28ba +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5va67478/nmdc:wfrbt-11-vaww0a33.1/nmdc_wfrbt-11-vaww0a33.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8032cf624748e74a812149ddcc7b28ba nmdc:dobj-11-h0azqd67 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5va67478 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vaww0a33.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d132f3e5312875f4c16ec846d6d9b6c9 nmdc:wfrbt-11-vaww0a33.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5va67478 +INFO:root:omics_processing_id: nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5628da197ab695960a216830c3270b35 nmdc:dobj-11-k38vhb80 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-jdrkg437 +INFO:root:New activity id created for nmdc:omprc-11-jdrkg437 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7wyphh83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrqc-11-7wyphh83.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a9650aeb0d4eef8aaeefe6d190b83b57 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrqc-11-7wyphh83.1/nmdc_wfrqc-11-7wyphh83.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9650aeb0d4eef8aaeefe6d190b83b57 nmdc:dobj-11-931nz273 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7wyphh83.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36ad3ea166cbd94ea5ee5fdffa640201 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrqc-11-7wyphh83.1/nmdc_wfrqc-11-7wyphh83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36ad3ea166cbd94ea5ee5fdffa640201 nmdc:dobj-11-vde86e32 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7wyphh83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d13b805052a8e9e513bbce5482f3d1ad nmdc:wfrqc-11-7wyphh83.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-jdrkg437 +INFO:root:New activity id created for nmdc:omprc-11-jdrkg437 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6zhe4073.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfmgas-11-6zhe4073.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b014d4c194e2958fedd486991ef7857 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfmgas-11-6zhe4073.1/nmdc_wfmgas-11-6zhe4073.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b014d4c194e2958fedd486991ef7857 nmdc:dobj-11-ndnmkt56 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6zhe4073.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:463f7b4917fadbb98e48bf5a868ee232 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfmgas-11-6zhe4073.1/nmdc_wfmgas-11-6zhe4073.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:463f7b4917fadbb98e48bf5a868ee232 nmdc:dobj-11-kcdpks85 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6zhe4073.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4346122bcea8b27a10762fb49f6fd24 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfmgas-11-6zhe4073.1/nmdc_wfmgas-11-6zhe4073.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4346122bcea8b27a10762fb49f6fd24 nmdc:dobj-11-s4k4pf46 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6zhe4073.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e00ddf8dd68b5d08edb2ee655322074 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfmgas-11-6zhe4073.1/nmdc_wfmgas-11-6zhe4073.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e00ddf8dd68b5d08edb2ee655322074 nmdc:dobj-11-tzfwm258 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6zhe4073.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aac9192018f6e6e4ea966d050baf5b95 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfmgas-11-6zhe4073.1/nmdc_wfmgas-11-6zhe4073.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aac9192018f6e6e4ea966d050baf5b95 nmdc:dobj-11-9wjdjs09 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6zhe4073.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d13b805052a8e9e513bbce5482f3d1ad nmdc:wfmgas-11-6zhe4073.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-jdrkg437 +INFO:root:New activity id created for nmdc:omprc-11-jdrkg437 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-b25abm87.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3f94c030cf1e1614f6a634c164a8641 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3f94c030cf1e1614f6a634c164a8641 nmdc:dobj-11-2ze9c414 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5b21e4cb19cbcd38a76431e860a3a7f +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5b21e4cb19cbcd38a76431e860a3a7f nmdc:dobj-11-dp2ddm63 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1495515ceb2f9a5bb3458a9d8897d574 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1495515ceb2f9a5bb3458a9d8897d574 nmdc:dobj-11-ewp8rs04 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a28d9e06d8a824a7d52bd8c4c082809f +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a28d9e06d8a824a7d52bd8c4c082809f nmdc:dobj-11-pgsc6712 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c78400f946b1d8845c791e1c4d3c0735 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c78400f946b1d8845c791e1c4d3c0735 nmdc:dobj-11-pdm8sb63 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8dac372e7893315bdffea0163790bc16 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dac372e7893315bdffea0163790bc16 nmdc:dobj-11-kf6zgx23 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84f88a6fe3301861e1e4aee8ac27f274 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84f88a6fe3301861e1e4aee8ac27f274 nmdc:dobj-11-1vbc8t41 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4d2da9da5d120b5e6bd97f2b32596fe +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4d2da9da5d120b5e6bd97f2b32596fe nmdc:dobj-11-2yf8k752 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:020bcdb11b80147b42772dda5e24309a +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jdrkg437/nmdc:wfrbt-11-b25abm87.1/nmdc_wfrbt-11-b25abm87.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:020bcdb11b80147b42772dda5e24309a nmdc:dobj-11-kmgxxc85 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-jdrkg437 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b25abm87.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d13b805052a8e9e513bbce5482f3d1ad nmdc:wfrbt-11-b25abm87.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-jdrkg437 +INFO:root:omics_processing_id: nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9005b01ee8d0ece5cb5921469bcf1195 nmdc:dobj-11-wz5hfg04 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-e2a44f94 +INFO:root:New activity id created for nmdc:omprc-11-e2a44f94 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-jrwdws06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrqc-11-jrwdws06.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e7ad808b3170c48254b94e93cd0917a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrqc-11-jrwdws06.1/nmdc_wfrqc-11-jrwdws06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e7ad808b3170c48254b94e93cd0917a nmdc:dobj-11-jbmpvn10 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jrwdws06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:144352c3fdcf639aeded64c01fa5c88f +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrqc-11-jrwdws06.1/nmdc_wfrqc-11-jrwdws06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:144352c3fdcf639aeded64c01fa5c88f nmdc:dobj-11-ced92g86 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jrwdws06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:478e0c4753e711036ab339ab21bfd359 nmdc:wfrqc-11-jrwdws06.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-e2a44f94 +INFO:root:New activity id created for nmdc:omprc-11-e2a44f94 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-n3qn7830.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfmgas-11-n3qn7830.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3a55e07fdf9f013f0a2be3524a1a5b6 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfmgas-11-n3qn7830.1/nmdc_wfmgas-11-n3qn7830.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3a55e07fdf9f013f0a2be3524a1a5b6 nmdc:dobj-11-5xn4bp37 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n3qn7830.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5236f7e51473db2bba6e9945ef2d972e +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfmgas-11-n3qn7830.1/nmdc_wfmgas-11-n3qn7830.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5236f7e51473db2bba6e9945ef2d972e nmdc:dobj-11-32vfft15 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n3qn7830.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:009edc89be66fdcefe05572ffa6f9526 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfmgas-11-n3qn7830.1/nmdc_wfmgas-11-n3qn7830.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:009edc89be66fdcefe05572ffa6f9526 nmdc:dobj-11-n6h0yr22 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n3qn7830.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89b23095094b56d0145830fb5bfc1005 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfmgas-11-n3qn7830.1/nmdc_wfmgas-11-n3qn7830.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89b23095094b56d0145830fb5bfc1005 nmdc:dobj-11-47rd7357 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n3qn7830.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56fcefe1b324b9e8691a641ba8ee4064 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfmgas-11-n3qn7830.1/nmdc_wfmgas-11-n3qn7830.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56fcefe1b324b9e8691a641ba8ee4064 nmdc:dobj-11-rnxq9914 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrbt-11-5cpzqv94.1/nmdc_wfrbt-11-5cpzqv94.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1f5dc3f01b57856ce06a1f218aa0b45 nmdc:dobj-11-0d7wta67 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cpzqv94.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7dab2a0826bf537569c38e0843fcd6d +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrbt-11-5cpzqv94.1/nmdc_wfrbt-11-5cpzqv94.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7dab2a0826bf537569c38e0843fcd6d nmdc:dobj-11-jpffzf19 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cpzqv94.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f94b33c6dc14a8c4cf263f23cfac9cf +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrbt-11-5cpzqv94.1/nmdc_wfrbt-11-5cpzqv94.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f94b33c6dc14a8c4cf263f23cfac9cf nmdc:dobj-11-y9z01045 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cpzqv94.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6c105f945b6c0db018ea912126fe6395 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrbt-11-5cpzqv94.1/nmdc_wfrbt-11-5cpzqv94.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6c105f945b6c0db018ea912126fe6395 nmdc:dobj-11-31m0r814 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cpzqv94.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb1d4daf26526dad04119b9dd5c784ad +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrbt-11-5cpzqv94.1/nmdc_wfrbt-11-5cpzqv94.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb1d4daf26526dad04119b9dd5c784ad nmdc:dobj-11-jk3ff812 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cpzqv94.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0342aa4486d1d42bad3ebcf82a7b4ce4 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrbt-11-5cpzqv94.1/nmdc_wfrbt-11-5cpzqv94.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0342aa4486d1d42bad3ebcf82a7b4ce4 nmdc:dobj-11-353x9252 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cpzqv94.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b967a7b0445e620f8dbc3f58864898a1 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e2a44f94/nmdc:wfrbt-11-5cpzqv94.1/nmdc_wfrbt-11-5cpzqv94.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b967a7b0445e620f8dbc3f58864898a1 nmdc:dobj-11-v85heb38 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-e2a44f94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cpzqv94.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:478e0c4753e711036ab339ab21bfd359 nmdc:wfrbt-11-5cpzqv94.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-e2a44f94 +INFO:root:omics_processing_id: nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fecb636f6fbcdcbb1ebb54844ad79a30 nmdc:dobj-11-b6xkdm49 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-7ebp2p55 +INFO:root:New activity id created for nmdc:omprc-11-7ebp2p55 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fdj0w372.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrqc-11-fdj0w372.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8a6c5cc07a9b4cecf0a3f6316fac763 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrqc-11-fdj0w372.1/nmdc_wfrqc-11-fdj0w372.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8a6c5cc07a9b4cecf0a3f6316fac763 nmdc:dobj-11-r46xc367 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fdj0w372.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45fac98a2ff5eed6567596f817c2eb55 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrqc-11-fdj0w372.1/nmdc_wfrqc-11-fdj0w372.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45fac98a2ff5eed6567596f817c2eb55 nmdc:dobj-11-y6603j55 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fdj0w372.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:165ea3b27e7a2a0937ea6c3dbceba6ab nmdc:wfrqc-11-fdj0w372.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-7ebp2p55 +INFO:root:New activity id created for nmdc:omprc-11-7ebp2p55 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qdrs4647.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfmgas-11-qdrs4647.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a058c1b944f87f000f817a7b24b8f649 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfmgas-11-qdrs4647.1/nmdc_wfmgas-11-qdrs4647.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a058c1b944f87f000f817a7b24b8f649 nmdc:dobj-11-1vp4he36 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qdrs4647.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:54917fba0beb50bbd69d138ccc361156 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfmgas-11-qdrs4647.1/nmdc_wfmgas-11-qdrs4647.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54917fba0beb50bbd69d138ccc361156 nmdc:dobj-11-4sbbb338 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qdrs4647.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b75379ef1612584e8c5bb4e67b8c4103 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfmgas-11-qdrs4647.1/nmdc_wfmgas-11-qdrs4647.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b75379ef1612584e8c5bb4e67b8c4103 nmdc:dobj-11-v1h1ar63 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qdrs4647.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa6139f3e7f79cf18e8a912aa755a576 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfmgas-11-qdrs4647.1/nmdc_wfmgas-11-qdrs4647.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa6139f3e7f79cf18e8a912aa755a576 nmdc:dobj-11-dv2m9738 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qdrs4647.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26738611f6c697365d4d73b258598252 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfmgas-11-qdrs4647.1/nmdc_wfmgas-11-qdrs4647.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26738611f6c697365d4d73b258598252 nmdc:dobj-11-p0p0sf40 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qdrs4647.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:165ea3b27e7a2a0937ea6c3dbceba6ab nmdc:wfmgas-11-qdrs4647.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-7ebp2p55 +INFO:root:New activity id created for nmdc:omprc-11-7ebp2p55 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-av3v6z29.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrbt-11-av3v6z29.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3a1f9976a628d6a5aab400fab57f7bc +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrbt-11-av3v6z29.1/nmdc_wfrbt-11-av3v6z29.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3a1f9976a628d6a5aab400fab57f7bc nmdc:dobj-11-5wczb790 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-av3v6z29.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d2fe68650e9274900801d6a62bb22ad +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrbt-11-av3v6z29.1/nmdc_wfrbt-11-av3v6z29.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d2fe68650e9274900801d6a62bb22ad nmdc:dobj-11-abhzdd98 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-av3v6z29.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:af3ad5bf96609332aeba9108b17f1b68 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrbt-11-av3v6z29.1/nmdc_wfrbt-11-av3v6z29.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:af3ad5bf96609332aeba9108b17f1b68 nmdc:dobj-11-0awqmd13 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-av3v6z29.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79a556c376bf29753fb9ecec78742dc4 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrbt-11-av3v6z29.1/nmdc_wfrbt-11-av3v6z29.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79a556c376bf29753fb9ecec78742dc4 nmdc:dobj-11-4wk7ht31 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-7ebp2p55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-av3v6z29.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:825dbfc5c0ab9eb3b1eed4bb5003183f +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7ebp2p55/nmdc:wfrbt-11-av3v6z29.1/nmdc_wfrbt-11-av3v6z29.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:825dbfc5c0ab9eb3b1eed4bb5003183f nmdc:dobj-11-eyqy4393 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-7ebp2p55 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrqc-11-vk3bbw68.1/nmdc_wfrqc-11-vk3bbw68.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:761e757c3afa0ae848f64f685bc28e73 nmdc:dobj-11-10b4pa42 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vk3bbw68.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:083120355ca0853d9090b0c89fae30af nmdc:wfrqc-11-vk3bbw68.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-tj5qjr09 +INFO:root:New activity id created for nmdc:omprc-11-tj5qjr09 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-1fsd1j92.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfmgas-11-1fsd1j92.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f791d456d71f2458f140b0f448726523 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfmgas-11-1fsd1j92.1/nmdc_wfmgas-11-1fsd1j92.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f791d456d71f2458f140b0f448726523 nmdc:dobj-11-snk8e778 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1fsd1j92.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:925ebf5a418d34fcd0bf4667463e338a +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfmgas-11-1fsd1j92.1/nmdc_wfmgas-11-1fsd1j92.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:925ebf5a418d34fcd0bf4667463e338a nmdc:dobj-11-8fbhfn93 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1fsd1j92.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e90fed659eeb68e2f52076116869c43d +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfmgas-11-1fsd1j92.1/nmdc_wfmgas-11-1fsd1j92.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e90fed659eeb68e2f52076116869c43d nmdc:dobj-11-dj34nc30 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1fsd1j92.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:794fc0ef1e8dea53401a6c5f5ad7ddf0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfmgas-11-1fsd1j92.1/nmdc_wfmgas-11-1fsd1j92.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:794fc0ef1e8dea53401a6c5f5ad7ddf0 nmdc:dobj-11-n3147y75 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nmdc:omprc-11-tj5qjr09 +INFO:root:New activity id created for nmdc:omprc-11-tj5qjr09 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qpect133.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a39b5945696b0289a5f3464b3e10be82 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a39b5945696b0289a5f3464b3e10be82 nmdc:dobj-11-b8axgb16 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71eb2ab1131c248b2855d330cf983c9d +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71eb2ab1131c248b2855d330cf983c9d nmdc:dobj-11-aqn0bn50 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdd40f15c7a4df4af0265601377a8446 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdd40f15c7a4df4af0265601377a8446 nmdc:dobj-11-5rcwx687 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37d269c9f646b321b500065e446ad527 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37d269c9f646b321b500065e446ad527 nmdc:dobj-11-n6k3rq29 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:845512d6a12b846828b10aaaadd33aa1 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:845512d6a12b846828b10aaaadd33aa1 nmdc:dobj-11-nysysn16 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02a52b227f3e0ca62f05fed177a1ab23 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02a52b227f3e0ca62f05fed177a1ab23 nmdc:dobj-11-0emgb188 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22ffc1e2c47c66c2a7e44064dbf8c4ee +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22ffc1e2c47c66c2a7e44064dbf8c4ee nmdc:dobj-11-6ff6yy30 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cba12b1c78814777df392ea7ce8d9ca9 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cba12b1c78814777df392ea7ce8d9ca9 nmdc:dobj-11-d1q6fh04 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d0389379bfe1d89dfa0b5dab83438ea +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tj5qjr09/nmdc:wfrbt-11-qpect133.1/nmdc_wfrbt-11-qpect133.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d0389379bfe1d89dfa0b5dab83438ea nmdc:dobj-11-s9x52t87 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-tj5qjr09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qpect133.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:083120355ca0853d9090b0c89fae30af nmdc:wfrbt-11-qpect133.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-tj5qjr09 +INFO:root:omics_processing_id: nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:427e876ab835340ff2162e32145f1ffc nmdc:dobj-11-wjz75m39 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-h7350f60 +INFO:root:New activity id created for nmdc:omprc-11-h7350f60 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gm5qzv14.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrqc-11-gm5qzv14.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44b30c7978e2706161d3e9f11dc1d49a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrqc-11-gm5qzv14.1/nmdc_wfrqc-11-gm5qzv14.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44b30c7978e2706161d3e9f11dc1d49a nmdc:dobj-11-pcvvme83 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gm5qzv14.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3185dd52bb4df3a30ec3e3e0ee5cff85 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrqc-11-gm5qzv14.1/nmdc_wfrqc-11-gm5qzv14.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3185dd52bb4df3a30ec3e3e0ee5cff85 nmdc:dobj-11-aajpc502 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gm5qzv14.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3162f3141b69b17625d21370a4d87341 nmdc:wfrqc-11-gm5qzv14.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-h7350f60 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfmgas-11-888tf311.1/nmdc_wfmgas-11-888tf311.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:933ed57a5e225a4fa347997112ebc473 nmdc:dobj-11-sssb3p79 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-888tf311.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52fa9d7b3c60ef261753723e99d73406 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfmgas-11-888tf311.1/nmdc_wfmgas-11-888tf311.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52fa9d7b3c60ef261753723e99d73406 nmdc:dobj-11-kp56sr37 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-888tf311.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0649b71fc97492c4721007b60513447a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfmgas-11-888tf311.1/nmdc_wfmgas-11-888tf311.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0649b71fc97492c4721007b60513447a nmdc:dobj-11-h5b42r83 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-888tf311.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9fcd8929350b73b56b6a266dc4d59409 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfmgas-11-888tf311.1/nmdc_wfmgas-11-888tf311.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9fcd8929350b73b56b6a266dc4d59409 nmdc:dobj-11-q3ts0k98 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrbt-11-3p3q7a13.1/nmdc_wfrbt-11-3p3q7a13.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21f083eeb49118bf2555d078d92bd962 nmdc:dobj-11-c3x6ar66 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3p3q7a13.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2373d9bd2a587547c11b1a23010bd97a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrbt-11-3p3q7a13.1/nmdc_wfrbt-11-3p3q7a13.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2373d9bd2a587547c11b1a23010bd97a nmdc:dobj-11-d47bn370 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3p3q7a13.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22a2479e4d14449f45f6be7c88326233 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrbt-11-3p3q7a13.1/nmdc_wfrbt-11-3p3q7a13.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22a2479e4d14449f45f6be7c88326233 nmdc:dobj-11-5pzabk31 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3p3q7a13.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3c9eb217b29501623f8851555621667a +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrbt-11-3p3q7a13.1/nmdc_wfrbt-11-3p3q7a13.1_centrifuge_krona.html 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nmdc:00f0d4655f18abb96489f6fe81b1d9a8 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrbt-11-3p3q7a13.1/nmdc_wfrbt-11-3p3q7a13.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00f0d4655f18abb96489f6fe81b1d9a8 nmdc:dobj-11-drh6aq19 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3p3q7a13.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58bbba432a13d6a4ff9787e8a7582107 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h7350f60/nmdc:wfrbt-11-3p3q7a13.1/nmdc_wfrbt-11-3p3q7a13.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58bbba432a13d6a4ff9787e8a7582107 nmdc:dobj-11-ckyj4t10 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-h7350f60 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3p3q7a13.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3162f3141b69b17625d21370a4d87341 nmdc:wfrbt-11-3p3q7a13.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-h7350f60 +INFO:root:omics_processing_id: nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f029a08011a7cf681b7d88178fd367c nmdc:dobj-11-hvnf2q97 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-d45hhv78 +INFO:root:New activity id created for nmdc:omprc-11-d45hhv78 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-14jess44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrqc-11-14jess44.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d63ed00b5c9bf4938e6360e5a3b707ec +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrqc-11-14jess44.1/nmdc_wfrqc-11-14jess44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d63ed00b5c9bf4938e6360e5a3b707ec nmdc:dobj-11-zv29y903 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-14jess44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:592d74e5fafeef7acab6dc0f4b26e6d4 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrqc-11-14jess44.1/nmdc_wfrqc-11-14jess44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:592d74e5fafeef7acab6dc0f4b26e6d4 nmdc:dobj-11-m1q2vm18 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-14jess44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2bee43fd852ca31094866ad15f7797cc nmdc:wfrqc-11-14jess44.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-d45hhv78 +INFO:root:New activity id created for nmdc:omprc-11-d45hhv78 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-mw0y1n30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfmgas-11-mw0y1n30.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d3a793a56e5aea153cfa752eef417f6 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfmgas-11-mw0y1n30.1/nmdc_wfmgas-11-mw0y1n30.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d3a793a56e5aea153cfa752eef417f6 nmdc:dobj-11-nsbfqd56 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-d45hhv78 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nmdc:b7464b409bac45980334e8b9582dde76 nmdc:dobj-11-ada24t66 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mw0y1n30.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1183943bf73d5f88c58d391c410c5720 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfmgas-11-mw0y1n30.1/nmdc_wfmgas-11-mw0y1n30.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1183943bf73d5f88c58d391c410c5720 nmdc:dobj-11-tj73da96 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mw0y1n30.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4513a498be127076fad59262470bbe10 +INFO:root:New file path computed for Assembly Coverage BAM: 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nmdc:257d57ff4b4873ce3c880616d3aa877d +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:257d57ff4b4873ce3c880616d3aa877d nmdc:dobj-11-52b0zw51 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b85c684a47dba91af40e043a5681e039 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b85c684a47dba91af40e043a5681e039 nmdc:dobj-11-w2h0dv13 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9ac885a5c1ac530afd276b4d4938abef +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ac885a5c1ac530afd276b4d4938abef nmdc:dobj-11-5h7at158 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d0286b2681e5a6474691c3d01c2203d +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d0286b2681e5a6474691c3d01c2203d nmdc:dobj-11-4fdexd22 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62d7528151f50669b66836a5891961ae +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62d7528151f50669b66836a5891961ae nmdc:dobj-11-5rtk0835 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1494c3033b51628bd663eb3e3cfabf7f +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1494c3033b51628bd663eb3e3cfabf7f nmdc:dobj-11-w67t1787 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e9dd04c9a60b8de52f4b5b21bba628b +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e9dd04c9a60b8de52f4b5b21bba628b nmdc:dobj-11-fnk0ck15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:57bf953e5032431330908daed02807df +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:57bf953e5032431330908daed02807df nmdc:dobj-11-wpt0rv53 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be54ee893a4fe181bad59cf224d4df41 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d45hhv78/nmdc:wfrbt-11-4ffptd92.1/nmdc_wfrbt-11-4ffptd92.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be54ee893a4fe181bad59cf224d4df41 nmdc:dobj-11-dg6mn388 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-d45hhv78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4ffptd92.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2bee43fd852ca31094866ad15f7797cc nmdc:wfrbt-11-4ffptd92.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-d45hhv78 +INFO:root:omics_processing_id: nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef236d37826d8d47414153ba6545cad6 nmdc:dobj-11-kv00z533 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gayt9438 +INFO:root:New activity id created for nmdc:omprc-11-gayt9438 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xy49db22.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrqc-11-xy49db22.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b057cb8547ba01753e500c36bf272f0e +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrqc-11-xy49db22.1/nmdc_wfrqc-11-xy49db22.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b057cb8547ba01753e500c36bf272f0e nmdc:dobj-11-0ewb9x80 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xy49db22.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:840c1d80996431e0ca43b1dcf557d29c +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrqc-11-xy49db22.1/nmdc_wfrqc-11-xy49db22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:840c1d80996431e0ca43b1dcf557d29c nmdc:dobj-11-wb4r1h32 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xy49db22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3425d885010aaefff4add4c1b7919c0f nmdc:wfrqc-11-xy49db22.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gayt9438 +INFO:root:New activity id created for nmdc:omprc-11-gayt9438 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vxs0ky47.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfmgas-11-vxs0ky47.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c5105444b821e7b992a7259c86fdd4e6 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfmgas-11-vxs0ky47.1/nmdc_wfmgas-11-vxs0ky47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5105444b821e7b992a7259c86fdd4e6 nmdc:dobj-11-wxkpex43 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vxs0ky47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f01bf6b3152c1d9cf35703ba8bf992f8 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfmgas-11-vxs0ky47.1/nmdc_wfmgas-11-vxs0ky47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f01bf6b3152c1d9cf35703ba8bf992f8 nmdc:dobj-11-k3b5tq93 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vxs0ky47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aea0d4138bccab68708d8b92c48e6f35 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfmgas-11-vxs0ky47.1/nmdc_wfmgas-11-vxs0ky47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aea0d4138bccab68708d8b92c48e6f35 nmdc:dobj-11-zpcb3t37 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vxs0ky47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2557a2f55f9ca983c694c81881c25caf +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfmgas-11-vxs0ky47.1/nmdc_wfmgas-11-vxs0ky47.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2557a2f55f9ca983c694c81881c25caf nmdc:dobj-11-keytzf70 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vxs0ky47.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58d0248538873cea124e1d481e5d69d4 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfmgas-11-vxs0ky47.1/nmdc_wfmgas-11-vxs0ky47.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58d0248538873cea124e1d481e5d69d4 nmdc:dobj-11-zw119c33 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vxs0ky47.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3425d885010aaefff4add4c1b7919c0f nmdc:wfmgas-11-vxs0ky47.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gayt9438 +INFO:root:New activity id created for nmdc:omprc-11-gayt9438 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-tf2ncs22.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9ae8ab102281f1e073acb667d291b389 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ae8ab102281f1e073acb667d291b389 nmdc:dobj-11-w4j9rb87 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eff3d53bad90cb59b02cf08df64c174b +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eff3d53bad90cb59b02cf08df64c174b nmdc:dobj-11-7cxxxy29 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4161c54bfcf513ba58c863eabb5711a1 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4161c54bfcf513ba58c863eabb5711a1 nmdc:dobj-11-8cjw6931 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5802d0beb488a98f8ff15fd97dc6c1a4 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5802d0beb488a98f8ff15fd97dc6c1a4 nmdc:dobj-11-t75bw293 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9128e37d150fa60f62cf6263f5f69a5c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9128e37d150fa60f62cf6263f5f69a5c nmdc:dobj-11-wgyyks77 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56898262a86a6558c77469c39f391aaf +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56898262a86a6558c77469c39f391aaf nmdc:dobj-11-nce6qy16 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b95ac57939ad81423885e3c78d1274a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b95ac57939ad81423885e3c78d1274a nmdc:dobj-11-p2hjta35 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58b3a633a4f8a34df1f586f541a00e37 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58b3a633a4f8a34df1f586f541a00e37 nmdc:dobj-11-gyer8t41 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:762be89f9a63efd1ce5dc13f3966188e +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gayt9438/nmdc:wfrbt-11-tf2ncs22.1/nmdc_wfrbt-11-tf2ncs22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:762be89f9a63efd1ce5dc13f3966188e nmdc:dobj-11-1r5g7364 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gayt9438 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tf2ncs22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3425d885010aaefff4add4c1b7919c0f nmdc:wfrbt-11-tf2ncs22.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-9cgqdx07/nmdc:wfmgas-11-sdxeeq33.1/nmdc_wfmgas-11-sdxeeq33.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4ff8da4bd95cc3529659ab028829c77 nmdc:dobj-11-xf7abb96 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-9cgqdx07 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sdxeeq33.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b03e9c9e06987b7b76ca779d53a3c29b +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9cgqdx07/nmdc:wfmgas-11-sdxeeq33.1/nmdc_wfmgas-11-sdxeeq33.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b03e9c9e06987b7b76ca779d53a3c29b nmdc:dobj-11-enw9sd38 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9cgqdx07 +INFO:nmdc_automation.re_iding.base:new_filename: 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9cgqdx07/nmdc:wfrbt-11-ftr3tb38.1/nmdc_wfrbt-11-ftr3tb38.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:232dbb17e195a5ec5e247a46f776d491 nmdc:dobj-11-hv39s577 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9cgqdx07 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ftr3tb38.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eed3eb41f63c9c07eeec6c916790c93c +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9cgqdx07/nmdc:wfrbt-11-ftr3tb38.1/nmdc_wfrbt-11-ftr3tb38.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eed3eb41f63c9c07eeec6c916790c93c nmdc:dobj-11-4jhg3x77 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for 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nmdc:ae90a85913cd6a42aca0d73c7786dad5 nmdc:dobj-11-7y8ezs48 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fnf89w25.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a82f8eb5d3dae64ee5fc8ca04d4d18ac +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfmgas-11-fnf89w25.1/nmdc_wfmgas-11-fnf89w25.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a82f8eb5d3dae64ee5fc8ca04d4d18ac nmdc:dobj-11-cgjw4h54 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fnf89w25.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cf2722d7b6db345d4ff61e80583771ab +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfmgas-11-fnf89w25.1/nmdc_wfmgas-11-fnf89w25.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf2722d7b6db345d4ff61e80583771ab nmdc:dobj-11-t0mcve54 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fnf89w25.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:10f7aee08c055ba546a2f93a0d3178e3 nmdc:wfmgas-11-fnf89w25.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-9dnv2t94 +INFO:root:New activity id created for nmdc:omprc-11-9dnv2t94 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-r768mv53.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:613711a1266e57ae9eef1bce9dc5fb8f +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:613711a1266e57ae9eef1bce9dc5fb8f nmdc:dobj-11-hjcf2a06 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b15f888391efd3d07413a332442f980c +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b15f888391efd3d07413a332442f980c nmdc:dobj-11-6r34yc83 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:55e2d71d835374bd71e629fee4666686 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:55e2d71d835374bd71e629fee4666686 nmdc:dobj-11-ev2atr78 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91820c354a8445c383fb670a9ccd70fe +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91820c354a8445c383fb670a9ccd70fe nmdc:dobj-11-72eb5c17 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9dac9a08078af23b74ab9668165545cc +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9dac9a08078af23b74ab9668165545cc nmdc:dobj-11-9fxn7t12 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:97552d1ac4011379a5c4885c0368895b +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97552d1ac4011379a5c4885c0368895b nmdc:dobj-11-6zdp4598 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a95037b31aee3696e4a7e95b8d3f04ab +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a95037b31aee3696e4a7e95b8d3f04ab nmdc:dobj-11-j10ry404 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:70a826d5653a75d9260d45c08e4e1c8f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:70a826d5653a75d9260d45c08e4e1c8f nmdc:dobj-11-wb4j5768 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:11e318611127f14cafdf60c94dc73ced +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9dnv2t94/nmdc:wfrbt-11-r768mv53.1/nmdc_wfrbt-11-r768mv53.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11e318611127f14cafdf60c94dc73ced nmdc:dobj-11-36qhzs04 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9dnv2t94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r768mv53.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:10f7aee08c055ba546a2f93a0d3178e3 nmdc:wfrbt-11-r768mv53.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9dnv2t94 +INFO:root:omics_processing_id: nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8f0061c3741771b64a39eb4c1bcfdb4 nmdc:dobj-11-s2scpg77 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-9zc7xt29 +INFO:root:New activity id created for nmdc:omprc-11-9zc7xt29 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-6scazq32.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrqc-11-6scazq32.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a74dfee7e91b7aa82a408de782c86564 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrqc-11-6scazq32.1/nmdc_wfrqc-11-6scazq32.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a74dfee7e91b7aa82a408de782c86564 nmdc:dobj-11-yc7d6k29 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6scazq32.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7642a4b4776066d0a8df66b23242b143 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrqc-11-6scazq32.1/nmdc_wfrqc-11-6scazq32.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7642a4b4776066d0a8df66b23242b143 nmdc:dobj-11-e9w82n78 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6scazq32.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:91552b423e601834ed40c067af5e9af7 nmdc:wfrqc-11-6scazq32.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-9zc7xt29 +INFO:root:New activity id created for nmdc:omprc-11-9zc7xt29 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-tzhata57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfmgas-11-tzhata57.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6f1c6cd51c27f44abd0fe11402d916e3 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfmgas-11-tzhata57.1/nmdc_wfmgas-11-tzhata57.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f1c6cd51c27f44abd0fe11402d916e3 nmdc:dobj-11-44hzrw57 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tzhata57.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75e462d62210807ac7e349dff685ce72 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfmgas-11-tzhata57.1/nmdc_wfmgas-11-tzhata57.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75e462d62210807ac7e349dff685ce72 nmdc:dobj-11-qe07xb10 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tzhata57.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ff1b4237f5f63ffefb5680e26f2ecff +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfmgas-11-tzhata57.1/nmdc_wfmgas-11-tzhata57.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ff1b4237f5f63ffefb5680e26f2ecff nmdc:dobj-11-6km9yr51 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tzhata57.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50528c81734b62fbd65e278b86cc787f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfmgas-11-tzhata57.1/nmdc_wfmgas-11-tzhata57.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50528c81734b62fbd65e278b86cc787f nmdc:dobj-11-mme1vm31 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrbt-11-ynpe6n24.1/nmdc_wfrbt-11-ynpe6n24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:63306a884ff6894e6dcbcd5b69332433 nmdc:dobj-11-s5qvkp83 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ynpe6n24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c387cb27d8b0c6e620582772577d531 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrbt-11-ynpe6n24.1/nmdc_wfrbt-11-ynpe6n24.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c387cb27d8b0c6e620582772577d531 nmdc:dobj-11-4qxwah92 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9zc7xt29 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrbt-11-ynpe6n24.1/nmdc_wfrbt-11-ynpe6n24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8a2ad5d5d67c6c7ef87f1733c89ad5f nmdc:dobj-11-txqvgr36 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ynpe6n24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed45f1f8fec32426aaee5876f2c1503d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrbt-11-ynpe6n24.1/nmdc_wfrbt-11-ynpe6n24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed45f1f8fec32426aaee5876f2c1503d nmdc:dobj-11-ayhnr844 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ynpe6n24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c19f7717ddeedb4190590fab42613943 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrbt-11-ynpe6n24.1/nmdc_wfrbt-11-ynpe6n24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c19f7717ddeedb4190590fab42613943 nmdc:dobj-11-e7jpw887 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ynpe6n24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58f0482d00c2583e252ec72fd2b26fb5 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrbt-11-ynpe6n24.1/nmdc_wfrbt-11-ynpe6n24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58f0482d00c2583e252ec72fd2b26fb5 nmdc:dobj-11-e8t9dp28 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ynpe6n24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f3f94454d814268a08dc1ed5598afec +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9zc7xt29/nmdc:wfrbt-11-ynpe6n24.1/nmdc_wfrbt-11-ynpe6n24.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f3f94454d814268a08dc1ed5598afec nmdc:dobj-11-1xxnhe49 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9zc7xt29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ynpe6n24.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:91552b423e601834ed40c067af5e9af7 nmdc:wfrbt-11-ynpe6n24.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9zc7xt29 +INFO:root:omics_processing_id: nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6e21468fe67462f6a8548285c641c2a nmdc:dobj-11-xd2jj158 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-g7rfq994 +INFO:root:New activity id created for nmdc:omprc-11-g7rfq994 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9ekt2t33.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfrqc-11-9ekt2t33.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1bebafacc9e8ac8560e3736cf1b4378 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfrqc-11-9ekt2t33.1/nmdc_wfrqc-11-9ekt2t33.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1bebafacc9e8ac8560e3736cf1b4378 nmdc:dobj-11-wjnhhj31 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ekt2t33.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22d167cfc76e709707f97166ccc10a3f +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfrqc-11-9ekt2t33.1/nmdc_wfrqc-11-9ekt2t33.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22d167cfc76e709707f97166ccc10a3f nmdc:dobj-11-epbfdq28 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ekt2t33.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c11c90ab249d3c16ca193ef0dceab530 nmdc:wfrqc-11-9ekt2t33.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-g7rfq994 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfmgas-11-c52h0150.1/nmdc_wfmgas-11-c52h0150.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee08c35854cd9c991db747418ed85f62 nmdc:dobj-11-6p76gw46 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c52h0150.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e0eff49b13e4b9508539187458fb0152 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfmgas-11-c52h0150.1/nmdc_wfmgas-11-c52h0150.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e0eff49b13e4b9508539187458fb0152 nmdc:dobj-11-69gpsy20 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c52h0150.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de69cde9ba5adc4eab29cd1827ffdf2f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfmgas-11-c52h0150.1/nmdc_wfmgas-11-c52h0150.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de69cde9ba5adc4eab29cd1827ffdf2f nmdc:dobj-11-xk304387 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c52h0150.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db08d344cb88595dd4331bc6af9c67da +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfmgas-11-c52h0150.1/nmdc_wfmgas-11-c52h0150.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db08d344cb88595dd4331bc6af9c67da nmdc:dobj-11-nh0wjg08 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nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2vn62758.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd9c0860b09deddf22de7ffb8ecfc3ff +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfrbt-11-2vn62758.1/nmdc_wfrbt-11-2vn62758.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd9c0860b09deddf22de7ffb8ecfc3ff nmdc:dobj-11-hxgy1m85 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2vn62758.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7393defb87ab915eae4976f837d87b87 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfrbt-11-2vn62758.1/nmdc_wfrbt-11-2vn62758.1_centrifuge_krona.html 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nmdc:0a1672cfd189c5ac3048f8b809e8905f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfrbt-11-2vn62758.1/nmdc_wfrbt-11-2vn62758.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a1672cfd189c5ac3048f8b809e8905f nmdc:dobj-11-zjnpsc41 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2vn62758.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da26e0e34a83877eb719fd76984aaf03 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g7rfq994/nmdc:wfrbt-11-2vn62758.1/nmdc_wfrbt-11-2vn62758.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da26e0e34a83877eb719fd76984aaf03 nmdc:dobj-11-6ns23h55 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g7rfq994 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2vn62758.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c11c90ab249d3c16ca193ef0dceab530 nmdc:wfrbt-11-2vn62758.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-g7rfq994 +INFO:root:omics_processing_id: nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ade12a1786a6d215107d699b099f42b nmdc:dobj-11-gas3gp52 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-9mj0tm51 +INFO:root:New activity id created for nmdc:omprc-11-9mj0tm51 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3t3sp826.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfrqc-11-3t3sp826.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff0dd51a4d9ad20a6794b2581c50b25d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfrqc-11-3t3sp826.1/nmdc_wfrqc-11-3t3sp826.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff0dd51a4d9ad20a6794b2581c50b25d nmdc:dobj-11-b09fna54 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3t3sp826.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a6f3714cca6b71c27370cf4ed9a84317 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfrqc-11-3t3sp826.1/nmdc_wfrqc-11-3t3sp826.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6f3714cca6b71c27370cf4ed9a84317 nmdc:dobj-11-tvwzn062 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3t3sp826.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:101af1b4cc82f4787116f31b82e3f073 nmdc:wfrqc-11-3t3sp826.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-9mj0tm51 +INFO:root:New activity id created for nmdc:omprc-11-9mj0tm51 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0mad9412.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfmgas-11-0mad9412.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e643549fc7d9e0786365b6aeeaac9fc5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfmgas-11-0mad9412.1/nmdc_wfmgas-11-0mad9412.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e643549fc7d9e0786365b6aeeaac9fc5 nmdc:dobj-11-axtxjs68 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0mad9412.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:452a10f5160a329eb727aaccbf7deb7f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfmgas-11-0mad9412.1/nmdc_wfmgas-11-0mad9412.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:452a10f5160a329eb727aaccbf7deb7f nmdc:dobj-11-h40ddy79 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0mad9412.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:594da93958eb5efd83fe0878ef218606 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfmgas-11-0mad9412.1/nmdc_wfmgas-11-0mad9412.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:594da93958eb5efd83fe0878ef218606 nmdc:dobj-11-1yme5806 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0mad9412.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b99ffe38e55b160bb9a5501ed8117730 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfmgas-11-0mad9412.1/nmdc_wfmgas-11-0mad9412.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b99ffe38e55b160bb9a5501ed8117730 nmdc:dobj-11-qrab4215 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0mad9412.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:238a0721c337741578bccd6637d1a847 +INFO:root:New file path computed for Assembly Coverage BAM: 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nmdc:98b5178b3c126b951aec854a8b434521 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfrbt-11-ar4ctc25.1/nmdc_wfrbt-11-ar4ctc25.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98b5178b3c126b951aec854a8b434521 nmdc:dobj-11-egp6tz43 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ar4ctc25.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:239ae32f6740ca931e740842532202d8 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfrbt-11-ar4ctc25.1/nmdc_wfrbt-11-ar4ctc25.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:239ae32f6740ca931e740842532202d8 nmdc:dobj-11-vcg86b70 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ar4ctc25.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61b80ebaf45c979a3a9e8f42b7f196ec +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfrbt-11-ar4ctc25.1/nmdc_wfrbt-11-ar4ctc25.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61b80ebaf45c979a3a9e8f42b7f196ec nmdc:dobj-11-5gtbjb29 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ar4ctc25.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a08b5ad3204c88e1410ee56e4b167f8 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfrbt-11-ar4ctc25.1/nmdc_wfrbt-11-ar4ctc25.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a08b5ad3204c88e1410ee56e4b167f8 nmdc:dobj-11-xqngwy84 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9mj0tm51 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ar4ctc25.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72a3ec406899c3c215dcf0c0e3cde0c7 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mj0tm51/nmdc:wfrbt-11-ar4ctc25.1/nmdc_wfrbt-11-ar4ctc25.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72a3ec406899c3c215dcf0c0e3cde0c7 nmdc:dobj-11-c8hvhf34 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9mj0tm51 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nmdc:omprc-11-exy1n557 +INFO:root:New activity id created for nmdc:omprc-11-exy1n557 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3dvbmm03.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfrqc-11-3dvbmm03.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22ad929d111a0c9adc37a8136da0e55c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfrqc-11-3dvbmm03.1/nmdc_wfrqc-11-3dvbmm03.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22ad929d111a0c9adc37a8136da0e55c nmdc:dobj-11-4r2vsd66 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-exy1n557 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3dvbmm03.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62b891748a18e7e2c0d384ec1bfdda1f +INFO:root:New file path computed for QC Statistics: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfmgas-11-b6ja0766.1/nmdc_wfmgas-11-b6ja0766.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7076af4f21bebe7df54795daa3f1882e nmdc:dobj-11-33g8tf96 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-exy1n557 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b6ja0766.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e7785385f7325d7498a26c16f9e0425 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfmgas-11-b6ja0766.1/nmdc_wfmgas-11-b6ja0766.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e7785385f7325d7498a26c16f9e0425 nmdc:dobj-11-qhf4xm61 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-exy1n557 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b6ja0766.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0013f57daa8e8041a3129852552a4168 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfmgas-11-b6ja0766.1/nmdc_wfmgas-11-b6ja0766.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0013f57daa8e8041a3129852552a4168 nmdc:dobj-11-xk6k6w08 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-exy1n557 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b6ja0766.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:472e4b15377697c3cdd7046c73100a3a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfmgas-11-b6ja0766.1/nmdc_wfmgas-11-b6ja0766.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:472e4b15377697c3cdd7046c73100a3a nmdc:dobj-11-2xfjv322 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfrbt-11-npgpke15.1/nmdc_wfrbt-11-npgpke15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:297cb81869aaba7b44d6df27b0a04857 nmdc:dobj-11-vrcdyz53 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-exy1n557 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-npgpke15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a836255fab811241eac158f9d0d81ab3 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfrbt-11-npgpke15.1/nmdc_wfrbt-11-npgpke15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a836255fab811241eac158f9d0d81ab3 nmdc:dobj-11-wg633f65 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-exy1n557 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nmdc_wfrbt-11-npgpke15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed44a1920de3effa548ecb1692b49ff3 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfrbt-11-npgpke15.1/nmdc_wfrbt-11-npgpke15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed44a1920de3effa548ecb1692b49ff3 nmdc:dobj-11-xhhaty73 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-exy1n557 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-npgpke15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f96fbbf63788211e7bd56d090930f90 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfrbt-11-npgpke15.1/nmdc_wfrbt-11-npgpke15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f96fbbf63788211e7bd56d090930f90 nmdc:dobj-11-t3dmb680 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-exy1n557 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-npgpke15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45ca2ca678b28a44a6b395a4a91dea87 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-exy1n557/nmdc:wfrbt-11-npgpke15.1/nmdc_wfrbt-11-npgpke15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45ca2ca678b28a44a6b395a4a91dea87 nmdc:dobj-11-rbdcz288 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-exy1n557 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-npgpke15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5dbaa81427d68341c54f30bbcc4bcb41 nmdc:wfrbt-11-npgpke15.1 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ga2wf354/nmdc:wfrbt-11-kxvf4274.1/nmdc_wfrbt-11-kxvf4274.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79b134233b8f1afdf94cfcbd921357fa nmdc:dobj-11-h4fsyb86 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ga2wf354 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kxvf4274.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:548f74ca9a9a3a6d7bc437569e9b0b0a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ga2wf354/nmdc:wfrbt-11-kxvf4274.1/nmdc_wfrbt-11-kxvf4274.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:548f74ca9a9a3a6d7bc437569e9b0b0a nmdc:dobj-11-yg2zqw59 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ga2wf354 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kxvf4274.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f51bd8c9e5fb00cb9b307b2cc29afeb4 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ga2wf354/nmdc:wfrbt-11-kxvf4274.1/nmdc_wfrbt-11-kxvf4274.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f51bd8c9e5fb00cb9b307b2cc29afeb4 nmdc:dobj-11-fc4emc38 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ga2wf354 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kxvf4274.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:363f58472a1d7f489d1ef2ac5c6b0735 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ga2wf354/nmdc:wfrbt-11-kxvf4274.1/nmdc_wfrbt-11-kxvf4274.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:363f58472a1d7f489d1ef2ac5c6b0735 nmdc:dobj-11-0zz59q53 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ga2wf354 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kxvf4274.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:195197af70a8a8ece10143fbb766cfef +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ga2wf354/nmdc:wfrbt-11-kxvf4274.1/nmdc_wfrbt-11-kxvf4274.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:195197af70a8a8ece10143fbb766cfef nmdc:dobj-11-hg21n752 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ga2wf354 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kxvf4274.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a188e123c8fe9d1957d3a4543b44eda6 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ga2wf354/nmdc:wfrbt-11-kxvf4274.1/nmdc_wfrbt-11-kxvf4274.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a188e123c8fe9d1957d3a4543b44eda6 nmdc:dobj-11-f8t9k688 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ga2wf354 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kxvf4274.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b445bb864f3e59632ae3639d47e589a6 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ga2wf354/nmdc:wfrbt-11-kxvf4274.1/nmdc_wfrbt-11-kxvf4274.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b445bb864f3e59632ae3639d47e589a6 nmdc:dobj-11-5m4amz37 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ga2wf354 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kxvf4274.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d51a6a557a849bd36a12d03b8af531e8 nmdc:wfrbt-11-kxvf4274.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ga2wf354 +INFO:root:omics_processing_id: nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:643bf02168121f5f3041a6bd3d95a7e8 nmdc:dobj-11-ze1wkm68 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-t48wym25 +INFO:root:New activity id created for nmdc:omprc-11-t48wym25 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-v25wg436.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfrqc-11-v25wg436.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:771a369376a94eb2ddff0469510b59d8 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfrqc-11-v25wg436.1/nmdc_wfrqc-11-v25wg436.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:771a369376a94eb2ddff0469510b59d8 nmdc:dobj-11-czksfh44 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-v25wg436.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1076aaa7d6fa697e71f838066abf392c +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfrqc-11-v25wg436.1/nmdc_wfrqc-11-v25wg436.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1076aaa7d6fa697e71f838066abf392c nmdc:dobj-11-pcj3f321 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-v25wg436.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e1e880de91ee0087a8e3d7d8410cfd96 nmdc:wfrqc-11-v25wg436.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-t48wym25 +INFO:root:New activity id created for nmdc:omprc-11-t48wym25 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-nc9yy805.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfmgas-11-nc9yy805.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c2cda8daa5a6e2ffe16171c086b38f1 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfmgas-11-nc9yy805.1/nmdc_wfmgas-11-nc9yy805.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c2cda8daa5a6e2ffe16171c086b38f1 nmdc:dobj-11-y8mn2v61 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nc9yy805.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02af63e6c2ce82387689155c8c0a492c +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfmgas-11-nc9yy805.1/nmdc_wfmgas-11-nc9yy805.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02af63e6c2ce82387689155c8c0a492c nmdc:dobj-11-9yp3dq64 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nc9yy805.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcf1559beb49b47b4c16319e1d59bfc1 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfmgas-11-nc9yy805.1/nmdc_wfmgas-11-nc9yy805.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcf1559beb49b47b4c16319e1d59bfc1 nmdc:dobj-11-gg3bex56 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nc9yy805.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1b68dd05c447af4233cc18a6fc96d3a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfmgas-11-nc9yy805.1/nmdc_wfmgas-11-nc9yy805.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1b68dd05c447af4233cc18a6fc96d3a nmdc:dobj-11-5jxf0a74 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nc9yy805.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c54e1a29e5043562e946de41a8e8ad8 +INFO:root:New file path computed for Assembly Coverage BAM: 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report for nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-se3bx927.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe0fcb58bac55546b180750e3c0a7230 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t48wym25/nmdc:wfrbt-11-se3bx927.1/nmdc_wfrbt-11-se3bx927.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe0fcb58bac55546b180750e3c0a7230 nmdc:dobj-11-h341bq45 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t48wym25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-se3bx927.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b395cb2977ade308a989e9804003b08 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfrqc-11-w2019t96.1/nmdc_wfrqc-11-w2019t96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdb84dab30f72c2966cab7a7ea94a513 nmdc:dobj-11-wcprkw98 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-57ee0a12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w2019t96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:095f9fe99326a149178e01d5397f1f5d nmdc:wfrqc-11-w2019t96.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-57ee0a12 +INFO:root:New activity id created for nmdc:omprc-11-57ee0a12 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-m6e0xm59.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfmgas-11-m6e0xm59.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6643d9036c04fbd51765dddfe8e63497 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfmgas-11-m6e0xm59.1/nmdc_wfmgas-11-m6e0xm59.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6643d9036c04fbd51765dddfe8e63497 nmdc:dobj-11-g3nzrr84 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-57ee0a12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m6e0xm59.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8133ce864601a43a9b30026ed98ba39f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfmgas-11-m6e0xm59.1/nmdc_wfmgas-11-m6e0xm59.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8133ce864601a43a9b30026ed98ba39f nmdc:dobj-11-xgpnd887 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-57ee0a12 +INFO:nmdc_automation.re_iding.base:new_filename: 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfrbt-11-9saehk68.1/nmdc_wfrbt-11-9saehk68.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00538e77cbc8b0869ad192355cd08770 nmdc:dobj-11-nhkzhn47 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-57ee0a12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9saehk68.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8cc88a83448fa8121a5d6e068f13d4d +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfrbt-11-9saehk68.1/nmdc_wfrbt-11-9saehk68.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8cc88a83448fa8121a5d6e068f13d4d nmdc:dobj-11-3swmna63 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-57ee0a12 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nmdc_wfrbt-11-9saehk68.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:19ec16e5bbcf5c74b61ef6b5b4434209 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfrbt-11-9saehk68.1/nmdc_wfrbt-11-9saehk68.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19ec16e5bbcf5c74b61ef6b5b4434209 nmdc:dobj-11-z6memt94 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-57ee0a12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9saehk68.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8b9bf82f67d64aee532300902f2b31b +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfrbt-11-9saehk68.1/nmdc_wfrbt-11-9saehk68.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8b9bf82f67d64aee532300902f2b31b nmdc:dobj-11-54e40940 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-57ee0a12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9saehk68.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1f76f7e66f1513ccac6aca571b76e49 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-57ee0a12/nmdc:wfrbt-11-9saehk68.1/nmdc_wfrbt-11-9saehk68.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1f76f7e66f1513ccac6aca571b76e49 nmdc:dobj-11-bkytqb33 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-57ee0a12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9saehk68.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:095f9fe99326a149178e01d5397f1f5d nmdc:wfrbt-11-9saehk68.1 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nmdc:dobj-11-qfa49158 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-55fkh988.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09e370973c872f36e48e2b456cdd5553 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrqc-11-55fkh988.1/nmdc_wfrqc-11-55fkh988.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e370973c872f36e48e2b456cdd5553 nmdc:dobj-11-112wmm80 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-55fkh988.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:67fba11decb4caaf6cb7c908c448d709 nmdc:wfrqc-11-55fkh988.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ngkm3d14 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfmgas-11-w4qxyc30.1/nmdc_wfmgas-11-w4qxyc30.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0cba565f917f5912ebe571089e293dc7 nmdc:dobj-11-0y73tv74 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w4qxyc30.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:67a90eeeb7f69e0569420055bb259f0c +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfmgas-11-w4qxyc30.1/nmdc_wfmgas-11-w4qxyc30.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:67a90eeeb7f69e0569420055bb259f0c nmdc:dobj-11-h0ps7y68 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w4qxyc30.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5b1535cb35cebdaecd9078355e2971f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfmgas-11-w4qxyc30.1/nmdc_wfmgas-11-w4qxyc30.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5b1535cb35cebdaecd9078355e2971f nmdc:dobj-11-5x7hp065 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w4qxyc30.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b1edcedf15dc45d66af862d3fbc8c59 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfmgas-11-w4qxyc30.1/nmdc_wfmgas-11-w4qxyc30.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b1edcedf15dc45d66af862d3fbc8c59 nmdc:dobj-11-vtafqd20 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c072f083678b3266e1e91b0abff8b8f5 nmdc:dobj-11-qzxedc20 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9cb799e9808649434cd51cfcd2e70dd0 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrbt-11-qqqpyh98.1/nmdc_wfrbt-11-qqqpyh98.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9cb799e9808649434cd51cfcd2e70dd0 nmdc:dobj-11-t4mycj46 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bf03e1b91f52cd55a484bf8c1f65dbfd +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrbt-11-qqqpyh98.1/nmdc_wfrbt-11-qqqpyh98.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf03e1b91f52cd55a484bf8c1f65dbfd nmdc:dobj-11-ma396e64 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b41ba6d7020accfbaf0c060c35177cf +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrbt-11-qqqpyh98.1/nmdc_wfrbt-11-qqqpyh98.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b41ba6d7020accfbaf0c060c35177cf nmdc:dobj-11-3ev0rh34 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebb5530c2995a8869f6ce717271bb906 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrbt-11-qqqpyh98.1/nmdc_wfrbt-11-qqqpyh98.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebb5530c2995a8869f6ce717271bb906 nmdc:dobj-11-1554wy59 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b870ae6455d32588b1d90a4c791bfc0e +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrbt-11-qqqpyh98.1/nmdc_wfrbt-11-qqqpyh98.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b870ae6455d32588b1d90a4c791bfc0e nmdc:dobj-11-wajkyj90 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37a1faa519ee2b6c6fe659147d1292fe +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrbt-11-qqqpyh98.1/nmdc_wfrbt-11-qqqpyh98.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37a1faa519ee2b6c6fe659147d1292fe nmdc:dobj-11-4swr7s41 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:215da2e234ba74e66f3cfb8d47dca0bd +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrbt-11-qqqpyh98.1/nmdc_wfrbt-11-qqqpyh98.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:215da2e234ba74e66f3cfb8d47dca0bd nmdc:dobj-11-cmh1p491 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec0e65ab889d9b3f141b0073eba99442 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ngkm3d14/nmdc:wfrbt-11-qqqpyh98.1/nmdc_wfrbt-11-qqqpyh98.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec0e65ab889d9b3f141b0073eba99442 nmdc:dobj-11-dywy7h27 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ngkm3d14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qqqpyh98.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:67fba11decb4caaf6cb7c908c448d709 nmdc:wfrbt-11-qqqpyh98.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ngkm3d14 +INFO:root:omics_processing_id: nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae31dc6025bd2f236bbbfcd532a5a27e nmdc:dobj-11-1r4v6370 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-yrdezq85 +INFO:root:New activity id created for nmdc:omprc-11-yrdezq85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8gbfzq21.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrqc-11-8gbfzq21.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb7837845522e99c6f1a1e2de9762c1b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrqc-11-8gbfzq21.1/nmdc_wfrqc-11-8gbfzq21.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb7837845522e99c6f1a1e2de9762c1b nmdc:dobj-11-59a70c15 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8gbfzq21.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e52d36ac8694bc847688980c358ee50 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrqc-11-8gbfzq21.1/nmdc_wfrqc-11-8gbfzq21.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e52d36ac8694bc847688980c358ee50 nmdc:dobj-11-r27hq666 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8gbfzq21.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ec1450d59fe14487beb840ab22f46b84 nmdc:wfrqc-11-8gbfzq21.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-yrdezq85 +INFO:root:New activity id created for nmdc:omprc-11-yrdezq85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-y67m4222.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfmgas-11-y67m4222.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85306750f69acc81c2f3a1d94a83140a +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfmgas-11-y67m4222.1/nmdc_wfmgas-11-y67m4222.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85306750f69acc81c2f3a1d94a83140a nmdc:dobj-11-9k4dbs87 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-yrdezq85 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nmdc:c3edabf0e9db3c68145e65e0578f0acb nmdc:dobj-11-ptaykc81 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y67m4222.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e646450d6c2125ee9677dc07b226d918 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfmgas-11-y67m4222.1/nmdc_wfmgas-11-y67m4222.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e646450d6c2125ee9677dc07b226d918 nmdc:dobj-11-q4pm9061 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y67m4222.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb4ba3bec6e27c2e6bbcd998ec540e46 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfmgas-11-y67m4222.1/nmdc_wfmgas-11-y67m4222.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb4ba3bec6e27c2e6bbcd998ec540e46 nmdc:dobj-11-ptt34r30 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y67m4222.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ec1450d59fe14487beb840ab22f46b84 nmdc:wfmgas-11-y67m4222.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-yrdezq85 +INFO:root:New activity id created for nmdc:omprc-11-yrdezq85 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-02zwmd91.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:754c47a659693a840dfd476e40a5caeb +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754c47a659693a840dfd476e40a5caeb nmdc:dobj-11-jc7tq932 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b58e6559a5039f55f29c8d29dded2531 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b58e6559a5039f55f29c8d29dded2531 nmdc:dobj-11-9v71bx97 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90e807ca54df8ab9ef35e88194d81bfd +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90e807ca54df8ab9ef35e88194d81bfd nmdc:dobj-11-sq4n6a19 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3f5c5c18e1759e1feab6ad8600e4a0ec +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3f5c5c18e1759e1feab6ad8600e4a0ec nmdc:dobj-11-kk0he137 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:175161e428a5665f5ee51db6f5ac3af2 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:175161e428a5665f5ee51db6f5ac3af2 nmdc:dobj-11-cnmfqk57 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d7f6465a025ef53d558c82fe556ac67 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d7f6465a025ef53d558c82fe556ac67 nmdc:dobj-11-j6336p05 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7f5001afcfc8610ac3c0dbd1a5d242ff +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f5001afcfc8610ac3c0dbd1a5d242ff nmdc:dobj-11-bxtjh863 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:efef96ed99ea4c19f55898ae06a41cc2 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efef96ed99ea4c19f55898ae06a41cc2 nmdc:dobj-11-h6fhdj47 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:459be4ab09704cd057c3b0a126f76e21 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yrdezq85/nmdc:wfrbt-11-02zwmd91.1/nmdc_wfrbt-11-02zwmd91.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:459be4ab09704cd057c3b0a126f76e21 nmdc:dobj-11-x0q8g913 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-yrdezq85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-02zwmd91.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ec1450d59fe14487beb840ab22f46b84 nmdc:wfrbt-11-02zwmd91.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-yrdezq85 +INFO:root:omics_processing_id: nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3258359bdd9edd6c959ba8ceac422549 nmdc:dobj-11-eqnhw116 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-jy14hv75 +INFO:root:New activity id created for nmdc:omprc-11-jy14hv75 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fv9y0b48.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrqc-11-fv9y0b48.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c5cdcb3167350f52b5bcdf186c4b5e3b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrqc-11-fv9y0b48.1/nmdc_wfrqc-11-fv9y0b48.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5cdcb3167350f52b5bcdf186c4b5e3b nmdc:dobj-11-m21br224 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fv9y0b48.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92ba48ef478d0e9f62e96a9e122070ca +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrqc-11-fv9y0b48.1/nmdc_wfrqc-11-fv9y0b48.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92ba48ef478d0e9f62e96a9e122070ca nmdc:dobj-11-gwjxpt79 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fv9y0b48.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:f57280c61265b321fa6b01b16c99c011 nmdc:wfrqc-11-fv9y0b48.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-jy14hv75 +INFO:root:New activity id created for nmdc:omprc-11-jy14hv75 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x7w2xr30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfmgas-11-x7w2xr30.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:850ada5bad3f85a5c6cb114bf970fb72 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfmgas-11-x7w2xr30.1/nmdc_wfmgas-11-x7w2xr30.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:850ada5bad3f85a5c6cb114bf970fb72 nmdc:dobj-11-36sp1802 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x7w2xr30.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b41e15f211fd109e65c220fc3e0eb52a +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfmgas-11-x7w2xr30.1/nmdc_wfmgas-11-x7w2xr30.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b41e15f211fd109e65c220fc3e0eb52a nmdc:dobj-11-9b3gyc40 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x7w2xr30.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6e95f07f7a6fea914e70b21a0f76a6c0 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfmgas-11-x7w2xr30.1/nmdc_wfmgas-11-x7w2xr30.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e95f07f7a6fea914e70b21a0f76a6c0 nmdc:dobj-11-pay10r78 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x7w2xr30.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dda40e5371e2df4fe6ea829bcb7bdab9 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfmgas-11-x7w2xr30.1/nmdc_wfmgas-11-x7w2xr30.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dda40e5371e2df4fe6ea829bcb7bdab9 nmdc:dobj-11-f8n73w60 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nmdc:omprc-11-jy14hv75 +INFO:root:New activity id created for nmdc:omprc-11-jy14hv75 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-d0f68v38.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrbt-11-d0f68v38.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5617779e91fb4b8f9ea3075c71140426 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrbt-11-d0f68v38.1/nmdc_wfrbt-11-d0f68v38.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5617779e91fb4b8f9ea3075c71140426 nmdc:dobj-11-1092ps19 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d0f68v38.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec3b76ac0e1bcaf13aaf07626a0ce557 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrbt-11-d0f68v38.1/nmdc_wfrbt-11-d0f68v38.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec3b76ac0e1bcaf13aaf07626a0ce557 nmdc:dobj-11-fetvwv17 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d0f68v38.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ba683d128a4112fab4234e21e13e5773 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrbt-11-d0f68v38.1/nmdc_wfrbt-11-d0f68v38.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba683d128a4112fab4234e21e13e5773 nmdc:dobj-11-jkqfpy63 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-jy14hv75 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nmdc_wfrbt-11-d0f68v38.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8224096637aa29521aeb4829c53472a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrbt-11-d0f68v38.1/nmdc_wfrbt-11-d0f68v38.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8224096637aa29521aeb4829c53472a nmdc:dobj-11-1qag9169 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d0f68v38.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:402c77eae0b0dd5d6a1a6cde3e8ff047 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrbt-11-d0f68v38.1/nmdc_wfrbt-11-d0f68v38.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:402c77eae0b0dd5d6a1a6cde3e8ff047 nmdc:dobj-11-d7n96k63 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d0f68v38.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ff7b52a0de2affb4b57ed0a92e71515 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jy14hv75/nmdc:wfrbt-11-d0f68v38.1/nmdc_wfrbt-11-d0f68v38.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ff7b52a0de2affb4b57ed0a92e71515 nmdc:dobj-11-eqv9xf43 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-jy14hv75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d0f68v38.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f57280c61265b321fa6b01b16c99c011 nmdc:wfrbt-11-d0f68v38.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-jy14hv75 +INFO:root:omics_processing_id: nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfde68e9fbc62ecaccfffbcbb325dff3 nmdc:dobj-11-24a4q826 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-y7w2th54 +INFO:root:New activity id created for nmdc:omprc-11-y7w2th54 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-pssqb422.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrqc-11-pssqb422.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8184faad0a3ba673703e92c1f1bf18be +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrqc-11-pssqb422.1/nmdc_wfrqc-11-pssqb422.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8184faad0a3ba673703e92c1f1bf18be nmdc:dobj-11-hhw4e869 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pssqb422.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:749e862cdaacc50b3b6c7229a7bf00fe +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrqc-11-pssqb422.1/nmdc_wfrqc-11-pssqb422.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:749e862cdaacc50b3b6c7229a7bf00fe nmdc:dobj-11-pq73bj53 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pssqb422.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e2ee5f18dff9bc1d18d579605a8b47f5 nmdc:wfrqc-11-pssqb422.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-y7w2th54 +INFO:root:New activity id created for nmdc:omprc-11-y7w2th54 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rgzzwm66.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfmgas-11-rgzzwm66.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86bf954bda274899129a7d9a9e612dbf +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfmgas-11-rgzzwm66.1/nmdc_wfmgas-11-rgzzwm66.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bf954bda274899129a7d9a9e612dbf nmdc:dobj-11-vt907v10 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rgzzwm66.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:255585187558cecf78e15eccadcb8c1a +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfmgas-11-rgzzwm66.1/nmdc_wfmgas-11-rgzzwm66.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:255585187558cecf78e15eccadcb8c1a nmdc:dobj-11-sq61we79 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rgzzwm66.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ef1ad87945ac3d3fb3c5c1301f75926a +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfmgas-11-rgzzwm66.1/nmdc_wfmgas-11-rgzzwm66.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef1ad87945ac3d3fb3c5c1301f75926a nmdc:dobj-11-m9y99518 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rgzzwm66.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a35e3ad1a61d5a8d11e30a31c429c94d +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfmgas-11-rgzzwm66.1/nmdc_wfmgas-11-rgzzwm66.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a35e3ad1a61d5a8d11e30a31c429c94d nmdc:dobj-11-zgycty93 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rgzzwm66.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c43f9b214be06f882132e4e86824a461 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfmgas-11-rgzzwm66.1/nmdc_wfmgas-11-rgzzwm66.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c43f9b214be06f882132e4e86824a461 nmdc:dobj-11-72bmqj46 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfea131c5fe09ae14744a58ca1289407 nmdc:dobj-11-yc0znp39 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b40af7191752948813e038f5421a97a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrbt-11-0enbwd60.1/nmdc_wfrbt-11-0enbwd60.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b40af7191752948813e038f5421a97a nmdc:dobj-11-z55xcb13 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a9f527726d5c6df8da6ad34078e5a28 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrbt-11-0enbwd60.1/nmdc_wfrbt-11-0enbwd60.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a9f527726d5c6df8da6ad34078e5a28 nmdc:dobj-11-84cpta64 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee6442ae2152b519785cef75dc0fe9b6 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrbt-11-0enbwd60.1/nmdc_wfrbt-11-0enbwd60.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee6442ae2152b519785cef75dc0fe9b6 nmdc:dobj-11-1872e222 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8399d2d12e8c7665f1039e49da34994 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrbt-11-0enbwd60.1/nmdc_wfrbt-11-0enbwd60.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8399d2d12e8c7665f1039e49da34994 nmdc:dobj-11-fvx6g215 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50b3efa43b361ca941c8379298975e16 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrbt-11-0enbwd60.1/nmdc_wfrbt-11-0enbwd60.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50b3efa43b361ca941c8379298975e16 nmdc:dobj-11-tys0z222 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39ad8be91988612c64d011da97343de6 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrbt-11-0enbwd60.1/nmdc_wfrbt-11-0enbwd60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39ad8be91988612c64d011da97343de6 nmdc:dobj-11-19rjnx02 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44cb3692ac6598312240284640f3b640 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrbt-11-0enbwd60.1/nmdc_wfrbt-11-0enbwd60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44cb3692ac6598312240284640f3b640 nmdc:dobj-11-2453v916 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdd42e3d43bc92c2da7eede4d284aa8a +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7w2th54/nmdc:wfrbt-11-0enbwd60.1/nmdc_wfrbt-11-0enbwd60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdd42e3d43bc92c2da7eede4d284aa8a nmdc:dobj-11-5dhmm211 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-y7w2th54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0enbwd60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e2ee5f18dff9bc1d18d579605a8b47f5 nmdc:wfrbt-11-0enbwd60.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-y7w2th54 +INFO:root:omics_processing_id: nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:493d35a34cf9aefdc491e2cc47634dc2 nmdc:dobj-11-arw5p644 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-tf2dnc08 +INFO:root:New activity id created for nmdc:omprc-11-tf2dnc08 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0tk13q40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrqc-11-0tk13q40.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b1c9c8144319c30024d01a0fa391015 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrqc-11-0tk13q40.1/nmdc_wfrqc-11-0tk13q40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b1c9c8144319c30024d01a0fa391015 nmdc:dobj-11-pg2z6563 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0tk13q40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:520467e43a8a983f71b88885e24b6b82 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrqc-11-0tk13q40.1/nmdc_wfrqc-11-0tk13q40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:520467e43a8a983f71b88885e24b6b82 nmdc:dobj-11-ybvjmg49 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0tk13q40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ece6ccdd25627b649188d8300321940d nmdc:wfrqc-11-0tk13q40.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-tf2dnc08 +INFO:root:New activity id created for nmdc:omprc-11-tf2dnc08 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-q9gcca43.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfmgas-11-q9gcca43.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:202f110a59c3f890960dec3a17be40e0 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfmgas-11-q9gcca43.1/nmdc_wfmgas-11-q9gcca43.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:202f110a59c3f890960dec3a17be40e0 nmdc:dobj-11-n6qr6b62 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q9gcca43.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d62e1e8e72f5add5d113cb374f7fdf5f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfmgas-11-q9gcca43.1/nmdc_wfmgas-11-q9gcca43.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d62e1e8e72f5add5d113cb374f7fdf5f nmdc:dobj-11-dptms685 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q9gcca43.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e33280d700f1bfe69c63063a1c0933a +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfmgas-11-q9gcca43.1/nmdc_wfmgas-11-q9gcca43.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e33280d700f1bfe69c63063a1c0933a nmdc:dobj-11-xegx0n03 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q9gcca43.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6f1580a16096ded7e06c22d91126f8d +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfmgas-11-q9gcca43.1/nmdc_wfmgas-11-q9gcca43.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6f1580a16096ded7e06c22d91126f8d nmdc:dobj-11-5dvdaj75 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q9gcca43.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea98f7df5ad7521834001d609f982532 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfmgas-11-q9gcca43.1/nmdc_wfmgas-11-q9gcca43.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea98f7df5ad7521834001d609f982532 nmdc:dobj-11-nc9c0684 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q9gcca43.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ece6ccdd25627b649188d8300321940d nmdc:wfmgas-11-q9gcca43.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-tf2dnc08 +INFO:root:New activity id created for nmdc:omprc-11-tf2dnc08 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-fk2faf11.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c7c0922eed5f83494404206c325727e +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c7c0922eed5f83494404206c325727e nmdc:dobj-11-e8800g34 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3af0790a9a5f7bf63b5e201bc7b9f22e +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3af0790a9a5f7bf63b5e201bc7b9f22e nmdc:dobj-11-13909s82 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:abdb16e00e174663cfba8dd3aaca8514 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abdb16e00e174663cfba8dd3aaca8514 nmdc:dobj-11-rsh6wh06 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9164816c59a5480183da1c817b27c5be +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9164816c59a5480183da1c817b27c5be nmdc:dobj-11-840vcm17 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6135371d3b22cd3e67f13ef1cdce7f1c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6135371d3b22cd3e67f13ef1cdce7f1c nmdc:dobj-11-a3gyeq30 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:443d0316daec54638d05be7b0d17f565 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:443d0316daec54638d05be7b0d17f565 nmdc:dobj-11-pg5pb442 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:633ab133ac5949341a7c7c14744f52f9 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:633ab133ac5949341a7c7c14744f52f9 nmdc:dobj-11-w5q8hj85 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:757bb8990155bc5a33588a1dbbe6295a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:757bb8990155bc5a33588a1dbbe6295a nmdc:dobj-11-zx5ccg89 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32f35f1b87c88f614bd5f1fa96fcb6ae +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tf2dnc08/nmdc:wfrbt-11-fk2faf11.1/nmdc_wfrbt-11-fk2faf11.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32f35f1b87c88f614bd5f1fa96fcb6ae nmdc:dobj-11-61b8c590 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-tf2dnc08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fk2faf11.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ece6ccdd25627b649188d8300321940d nmdc:wfrbt-11-fk2faf11.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-tf2dnc08 +INFO:root:omics_processing_id: nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:711873b6a8c8f46db92feaf0fbc22ce9 nmdc:dobj-11-5d9bxr10 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-66xfp736 +INFO:root:New activity id created for nmdc:omprc-11-66xfp736 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4f8v9b57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfrqc-11-4f8v9b57.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f444734779801a58fd7b35ef64a272a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfrqc-11-4f8v9b57.1/nmdc_wfrqc-11-4f8v9b57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f444734779801a58fd7b35ef64a272a nmdc:dobj-11-hq23hr32 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4f8v9b57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:920d4cfbe9491263b6d5518363829468 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfrqc-11-4f8v9b57.1/nmdc_wfrqc-11-4f8v9b57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:920d4cfbe9491263b6d5518363829468 nmdc:dobj-11-bj3jw703 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4f8v9b57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1e7364029d428a3dc25e870719ff3f79 nmdc:wfrqc-11-4f8v9b57.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-66xfp736 +INFO:root:New activity id created for nmdc:omprc-11-66xfp736 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3gftdt47.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfmgas-11-3gftdt47.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b63d9718f6835ea34f786f017c5ca3fe +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfmgas-11-3gftdt47.1/nmdc_wfmgas-11-3gftdt47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b63d9718f6835ea34f786f017c5ca3fe nmdc:dobj-11-9eh51w22 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3gftdt47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b21a35edac8f66fec9edf67fbffb5d4 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfmgas-11-3gftdt47.1/nmdc_wfmgas-11-3gftdt47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b21a35edac8f66fec9edf67fbffb5d4 nmdc:dobj-11-sndfvv28 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3gftdt47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2aef00c1fbbc8f41e491505df8f316c +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfmgas-11-3gftdt47.1/nmdc_wfmgas-11-3gftdt47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2aef00c1fbbc8f41e491505df8f316c nmdc:dobj-11-z9wtfx66 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3gftdt47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90c12c5e9faa4958865b659fbdaef577 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfmgas-11-3gftdt47.1/nmdc_wfmgas-11-3gftdt47.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90c12c5e9faa4958865b659fbdaef577 nmdc:dobj-11-fqqqgg71 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfrbt-11-fz3zhe80.1/nmdc_wfrbt-11-fz3zhe80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:beb89634c816df86324d2ca5a21d1dd7 nmdc:dobj-11-7jjesz04 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fz3zhe80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb1fc36bb0b091e8bffcc9f733905e84 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfrbt-11-fz3zhe80.1/nmdc_wfrbt-11-fz3zhe80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb1fc36bb0b091e8bffcc9f733905e84 nmdc:dobj-11-q49psd79 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-66xfp736 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nmdc_wfrbt-11-fz3zhe80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb6f54cfcb1aff2c06402c094b1f4f86 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfrbt-11-fz3zhe80.1/nmdc_wfrbt-11-fz3zhe80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb6f54cfcb1aff2c06402c094b1f4f86 nmdc:dobj-11-8pgq2s16 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fz3zhe80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:680d280fa1f3ccf9b7c63be20b3b8d10 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfrbt-11-fz3zhe80.1/nmdc_wfrbt-11-fz3zhe80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:680d280fa1f3ccf9b7c63be20b3b8d10 nmdc:dobj-11-qdke3y31 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fz3zhe80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:745da0809ad7299cf4cc48598f8df373 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-66xfp736/nmdc:wfrbt-11-fz3zhe80.1/nmdc_wfrbt-11-fz3zhe80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:745da0809ad7299cf4cc48598f8df373 nmdc:dobj-11-ffqh5h09 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-66xfp736 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fz3zhe80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1e7364029d428a3dc25e870719ff3f79 nmdc:wfrbt-11-fz3zhe80.1 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nmdc:dobj-11-s6etn003 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-m94hx554 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4qm2sh50.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad8b8aca81e54f7c2c0c5f7fe236a196 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m94hx554/nmdc:wfrqc-11-4qm2sh50.1/nmdc_wfrqc-11-4qm2sh50.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad8b8aca81e54f7c2c0c5f7fe236a196 nmdc:dobj-11-wgp4gf04 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m94hx554 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4qm2sh50.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:be0d4d3c098a727e94ef101eb80a37e6 nmdc:wfrqc-11-4qm2sh50.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m94hx554 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nmdc:omprc-11-m94hx554 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xd2ba68.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0d19472ab9cec6af41d4a636ca76a98 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m94hx554/nmdc:wfrbt-11-6xd2ba68.1/nmdc_wfrbt-11-6xd2ba68.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0d19472ab9cec6af41d4a636ca76a98 nmdc:dobj-11-2vpt4193 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m94hx554 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xd2ba68.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:753b55122aa55b1503092c9e8c78a8cb +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m94hx554/nmdc:wfrbt-11-6xd2ba68.1/nmdc_wfrbt-11-6xd2ba68.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:753b55122aa55b1503092c9e8c78a8cb nmdc:dobj-11-rvbeg911 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m94hx554 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xd2ba68.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b8008da297189760917715674f061bc5 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m94hx554/nmdc:wfrbt-11-6xd2ba68.1/nmdc_wfrbt-11-6xd2ba68.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b8008da297189760917715674f061bc5 nmdc:dobj-11-bgaxtj55 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m94hx554 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xd2ba68.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1117844ac89a14d64b789319ce4e395 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m94hx554/nmdc:wfrbt-11-6xd2ba68.1/nmdc_wfrbt-11-6xd2ba68.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1117844ac89a14d64b789319ce4e395 nmdc:dobj-11-x9fh6e70 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m94hx554 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xd2ba68.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:76ca4bd3df85b1199dbc63f8e1b9956b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m94hx554/nmdc:wfrbt-11-6xd2ba68.1/nmdc_wfrbt-11-6xd2ba68.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:76ca4bd3df85b1199dbc63f8e1b9956b nmdc:dobj-11-s9xz9b98 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m94hx554 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xd2ba68.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:be0d4d3c098a727e94ef101eb80a37e6 nmdc:wfrbt-11-6xd2ba68.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m94hx554 +INFO:root:omics_processing_id: nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c2c26e3bd428f914f3e07a779cf37b7 nmdc:dobj-11-kv738z18 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-vtvcpz11 +INFO:root:New activity id created for nmdc:omprc-11-vtvcpz11 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hg3x8x50.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrqc-11-hg3x8x50.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:841b5bb81bc2b17847afd0c69c0c2365 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrqc-11-hg3x8x50.1/nmdc_wfrqc-11-hg3x8x50.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:841b5bb81bc2b17847afd0c69c0c2365 nmdc:dobj-11-pdxjaj57 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hg3x8x50.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0a469c8e2834f99259fbf828e2435be8 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrqc-11-hg3x8x50.1/nmdc_wfrqc-11-hg3x8x50.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a469c8e2834f99259fbf828e2435be8 nmdc:dobj-11-d732tc72 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hg3x8x50.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1d0fda503faa0f3918a503dc9b852711 nmdc:wfrqc-11-hg3x8x50.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-vtvcpz11 +INFO:root:New activity id created for nmdc:omprc-11-vtvcpz11 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hbk65h10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfmgas-11-hbk65h10.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75f0029889c657335cda50d17dab2c2a +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfmgas-11-hbk65h10.1/nmdc_wfmgas-11-hbk65h10.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75f0029889c657335cda50d17dab2c2a nmdc:dobj-11-1xa36030 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hbk65h10.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34e967af3b4937c6e8c0624721c254d0 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfmgas-11-hbk65h10.1/nmdc_wfmgas-11-hbk65h10.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34e967af3b4937c6e8c0624721c254d0 nmdc:dobj-11-m7adgk37 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hbk65h10.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa49cd4d73785496019d288872c58418 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfmgas-11-hbk65h10.1/nmdc_wfmgas-11-hbk65h10.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa49cd4d73785496019d288872c58418 nmdc:dobj-11-tnh97m59 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hbk65h10.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e01612ebac4a5a6cd03300d24e3a2e8f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfmgas-11-hbk65h10.1/nmdc_wfmgas-11-hbk65h10.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e01612ebac4a5a6cd03300d24e3a2e8f nmdc:dobj-11-argj8z14 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hbk65h10.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71641b7106f9657d488428e9fce8efcb +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfmgas-11-hbk65h10.1/nmdc_wfmgas-11-hbk65h10.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71641b7106f9657d488428e9fce8efcb nmdc:dobj-11-1bc71q31 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hbk65h10.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1d0fda503faa0f3918a503dc9b852711 nmdc:wfmgas-11-hbk65h10.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-vtvcpz11 +INFO:root:New activity id created for nmdc:omprc-11-vtvcpz11 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-zxrweg77.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9127ff4245ecd10754f93b8cd23f6382 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9127ff4245ecd10754f93b8cd23f6382 nmdc:dobj-11-w5jvdb52 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4ed3e648215aa79e90589c316446786 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4ed3e648215aa79e90589c316446786 nmdc:dobj-11-sz0zyy40 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d30ab14352148b8ca7146d74379e155 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d30ab14352148b8ca7146d74379e155 nmdc:dobj-11-znmntf87 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78485327f1153e698639f4c358e6a4a4 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78485327f1153e698639f4c358e6a4a4 nmdc:dobj-11-canwvn44 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe2b7de4ef493aafb5c9128634153ed6 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe2b7de4ef493aafb5c9128634153ed6 nmdc:dobj-11-qrt8p807 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b1981b87bff66e8459b24af55cc6c4d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b1981b87bff66e8459b24af55cc6c4d nmdc:dobj-11-yggz9982 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:703fde9e6e8b214ad969a2e7109e4901 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:703fde9e6e8b214ad969a2e7109e4901 nmdc:dobj-11-1q1ss084 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da5e749bb35af1e7c65dc63463578bc7 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da5e749bb35af1e7c65dc63463578bc7 nmdc:dobj-11-4sfkqt65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:17f877c9fcefd9b3a90cfac10ee9d4da +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vtvcpz11/nmdc:wfrbt-11-zxrweg77.1/nmdc_wfrbt-11-zxrweg77.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:17f877c9fcefd9b3a90cfac10ee9d4da nmdc:dobj-11-byq7zk94 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-vtvcpz11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zxrweg77.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1d0fda503faa0f3918a503dc9b852711 nmdc:wfrbt-11-zxrweg77.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-vtvcpz11 +INFO:root:omics_processing_id: nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00bcab4a30f052baf86a21020758c93d nmdc:dobj-11-zktdas48 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8a57gk31 +INFO:root:New activity id created for nmdc:omprc-11-8a57gk31 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-h8292r91.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrqc-11-h8292r91.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25e25a7649337a8e4f54efb41fd23ffb +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrqc-11-h8292r91.1/nmdc_wfrqc-11-h8292r91.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25e25a7649337a8e4f54efb41fd23ffb nmdc:dobj-11-6724hx77 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h8292r91.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:405f4fc55eb02669e37c613fd2abd61a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrqc-11-h8292r91.1/nmdc_wfrqc-11-h8292r91.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:405f4fc55eb02669e37c613fd2abd61a nmdc:dobj-11-rr5aw137 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h8292r91.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e0eaa0865ee0c22471f42e64aa146520 nmdc:wfrqc-11-h8292r91.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-8a57gk31 +INFO:root:New activity id created for nmdc:omprc-11-8a57gk31 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vernj636.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfmgas-11-vernj636.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:57381f31c013937acbc2371dcff601c9 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfmgas-11-vernj636.1/nmdc_wfmgas-11-vernj636.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:57381f31c013937acbc2371dcff601c9 nmdc:dobj-11-fy043x80 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vernj636.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:448ed06780547ebc001af94a95180ad3 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfmgas-11-vernj636.1/nmdc_wfmgas-11-vernj636.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:448ed06780547ebc001af94a95180ad3 nmdc:dobj-11-kqv1g043 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vernj636.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a785bcc787a6fdf654b0bc70e369295 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfmgas-11-vernj636.1/nmdc_wfmgas-11-vernj636.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a785bcc787a6fdf654b0bc70e369295 nmdc:dobj-11-p8wmra98 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vernj636.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a4f5ee03be11cf57946501fad4d644a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfmgas-11-vernj636.1/nmdc_wfmgas-11-vernj636.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a4f5ee03be11cf57946501fad4d644a nmdc:dobj-11-0x55ha90 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrbt-11-992s7d90.1/nmdc_wfrbt-11-992s7d90.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0208898b5621c944bcacaa21262c1b4c nmdc:dobj-11-d7xmc328 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-992s7d90.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7bd8da53f4ec7fe40146c777dfeff67 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrbt-11-992s7d90.1/nmdc_wfrbt-11-992s7d90.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7bd8da53f4ec7fe40146c777dfeff67 nmdc:dobj-11-58f5kc64 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8a57gk31 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrbt-11-992s7d90.1/nmdc_wfrbt-11-992s7d90.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ef11b971ae7c0a2d782cc1c78915169 nmdc:dobj-11-mhfrpk97 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-992s7d90.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5efda0f3212323cba592de9bf6520db8 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrbt-11-992s7d90.1/nmdc_wfrbt-11-992s7d90.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5efda0f3212323cba592de9bf6520db8 nmdc:dobj-11-se6bpm52 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-992s7d90.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41b79022f2fb689f0a76009a77d2bf5d +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrbt-11-992s7d90.1/nmdc_wfrbt-11-992s7d90.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41b79022f2fb689f0a76009a77d2bf5d nmdc:dobj-11-8n1bgx06 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-992s7d90.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65fd8988cc0ff95c781b4803d611bf71 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrbt-11-992s7d90.1/nmdc_wfrbt-11-992s7d90.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65fd8988cc0ff95c781b4803d611bf71 nmdc:dobj-11-hv0xbk14 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-992s7d90.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f25ee72f0201143f19438d8af6facf12 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8a57gk31/nmdc:wfrbt-11-992s7d90.1/nmdc_wfrbt-11-992s7d90.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f25ee72f0201143f19438d8af6facf12 nmdc:dobj-11-trew9c89 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-8a57gk31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-992s7d90.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e0eaa0865ee0c22471f42e64aa146520 nmdc:wfrbt-11-992s7d90.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8a57gk31 +INFO:root:omics_processing_id: nmdc:omprc-11-818v1067 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3127cf86e54f51afed44371b171dd66a nmdc:dobj-11-sr8m4x29 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-818v1067 +INFO:root:New activity id created for nmdc:omprc-11-818v1067 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9fak1c25.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-818v1067/nmdc:wfrqc-11-9fak1c25.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:656029691bb3a0ac95df780905e89a25 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-818v1067/nmdc:wfrqc-11-9fak1c25.1/nmdc_wfrqc-11-9fak1c25.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:656029691bb3a0ac95df780905e89a25 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-818v1067/nmdc:wfrbt-11-288hvh45.1/nmdc_wfrbt-11-288hvh45.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e61e408d7dbbc43a91d36c65e65b64a nmdc:dobj-11-7egs7977 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-818v1067 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-288hvh45.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46348011161794207c521a970f35950a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-818v1067/nmdc:wfrbt-11-288hvh45.1/nmdc_wfrbt-11-288hvh45.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46348011161794207c521a970f35950a nmdc:dobj-11-dxn6pz36 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-818v1067 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-288hvh45.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:600bc9aa1dea1675a8b5379e86ab9065 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-818v1067/nmdc:wfrbt-11-288hvh45.1/nmdc_wfrbt-11-288hvh45.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:600bc9aa1dea1675a8b5379e86ab9065 nmdc:dobj-11-p7c2wp02 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-818v1067 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-288hvh45.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44f7fbe28894cf1652645980adcd7e04 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-818v1067/nmdc:wfrbt-11-288hvh45.1/nmdc_wfrbt-11-288hvh45.1_centrifuge_krona.html 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nmdc:e300cc4d41058ab82aef0d64564c5483 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-818v1067/nmdc:wfrbt-11-288hvh45.1/nmdc_wfrbt-11-288hvh45.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e300cc4d41058ab82aef0d64564c5483 nmdc:dobj-11-nf77s775 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-818v1067 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-288hvh45.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cf4c07b1bc7071099555c11c1cdbe3e8 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-818v1067/nmdc:wfrbt-11-288hvh45.1/nmdc_wfrbt-11-288hvh45.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf4c07b1bc7071099555c11c1cdbe3e8 nmdc:dobj-11-t0h65496 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-818v1067 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-288hvh45.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d5051021e35b2b6d795a52965b2e7b18 nmdc:wfrbt-11-288hvh45.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-818v1067 +INFO:root:omics_processing_id: nmdc:omprc-11-bsere476 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bcc083d5cb5061eac85cc9c6e3f46f1 nmdc:dobj-11-31x8qd61 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-bsere476 +INFO:root:New activity id created for nmdc:omprc-11-bsere476 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-84x4jr65.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bsere476/nmdc:wfrqc-11-84x4jr65.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f577eb95b2df6c0ec209e19a3967b2d2 +INFO:root:New file path computed 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nmdc_wfrqc-11-84x4jr65.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:7c10275f37c5bf19fe26de48a33668f8 nmdc:wfrqc-11-84x4jr65.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-bsere476 +INFO:root:New activity id created for nmdc:omprc-11-bsere476 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bnqpyf68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bsere476/nmdc:wfmgas-11-bnqpyf68.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fd74384246a60803f1e9af77d9590fb +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bsere476/nmdc:wfmgas-11-bnqpyf68.1/nmdc_wfmgas-11-bnqpyf68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fd74384246a60803f1e9af77d9590fb nmdc:dobj-11-bt1nq930 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-bsere476 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6aae3c5e1d2e3df4c4ca7ce45c15272f nmdc:dobj-11-ef5gnk76 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-bsere476 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jj2yb37.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60043869c4bf120551d76ddc4e9ec732 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bsere476/nmdc:wfrbt-11-1jj2yb37.1/nmdc_wfrbt-11-1jj2yb37.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60043869c4bf120551d76ddc4e9ec732 nmdc:dobj-11-b38d2e45 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-bsere476 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jj2yb37.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f4dfad3a92e922aafe23bb008d7dfb9 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bsere476/nmdc:wfrbt-11-1jj2yb37.1/nmdc_wfrbt-11-1jj2yb37.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f4dfad3a92e922aafe23bb008d7dfb9 nmdc:dobj-11-ay4yvm82 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-bsere476 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jj2yb37.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7c10275f37c5bf19fe26de48a33668f8 nmdc:wfrbt-11-1jj2yb37.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-bsere476 +INFO:root:omics_processing_id: nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f088c9fda5c109d2855a0cea71d216f8 nmdc:dobj-11-0ahz5v06 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gvffjn80 +INFO:root:New activity id created for nmdc:omprc-11-gvffjn80 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-chmjvt14.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrqc-11-chmjvt14.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b85b3a02904f34050a99731bd6f9b3c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrqc-11-chmjvt14.1/nmdc_wfrqc-11-chmjvt14.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b85b3a02904f34050a99731bd6f9b3c nmdc:dobj-11-qet9r730 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-chmjvt14.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7febc33785d8f1c23f824fec9850d832 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrqc-11-chmjvt14.1/nmdc_wfrqc-11-chmjvt14.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7febc33785d8f1c23f824fec9850d832 nmdc:dobj-11-m55gp932 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-chmjvt14.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:611d8b875774b925bb88cfc42231389d nmdc:wfrqc-11-chmjvt14.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gvffjn80 +INFO:root:New activity id created for nmdc:omprc-11-gvffjn80 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-tzsqar71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfmgas-11-tzsqar71.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1578965d34e76d3e1c135e6730a592dc +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfmgas-11-tzsqar71.1/nmdc_wfmgas-11-tzsqar71.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1578965d34e76d3e1c135e6730a592dc nmdc:dobj-11-2y5djg32 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tzsqar71.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89013bbacd4cb476393cf5e537ae8019 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfmgas-11-tzsqar71.1/nmdc_wfmgas-11-tzsqar71.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89013bbacd4cb476393cf5e537ae8019 nmdc:dobj-11-btp4ey63 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tzsqar71.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b8b57a02bf6844e707bd0c6f313c0d15 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfmgas-11-tzsqar71.1/nmdc_wfmgas-11-tzsqar71.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b8b57a02bf6844e707bd0c6f313c0d15 nmdc:dobj-11-0169ky39 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tzsqar71.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a929d618795c33e9c625cf3a685566c6 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfmgas-11-tzsqar71.1/nmdc_wfmgas-11-tzsqar71.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a929d618795c33e9c625cf3a685566c6 nmdc:dobj-11-27stcg93 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tzsqar71.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:64d2d0d0b00be5573b27610d9e1d764c +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfmgas-11-tzsqar71.1/nmdc_wfmgas-11-tzsqar71.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64d2d0d0b00be5573b27610d9e1d764c nmdc:dobj-11-382k2s33 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tzsqar71.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:611d8b875774b925bb88cfc42231389d nmdc:wfmgas-11-tzsqar71.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gvffjn80 +INFO:root:New activity id created for nmdc:omprc-11-gvffjn80 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jppjwf05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b59fea69fea8bcd962daa1687345fc0 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b59fea69fea8bcd962daa1687345fc0 nmdc:dobj-11-p4b9er12 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89d8d22df23648545cfd98fa3523fa93 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89d8d22df23648545cfd98fa3523fa93 nmdc:dobj-11-hewye203 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5fb621527f82aa7e1d6c50b45fea5857 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fb621527f82aa7e1d6c50b45fea5857 nmdc:dobj-11-jssrv931 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc83142b0db33b03a915b5c635c014c7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc83142b0db33b03a915b5c635c014c7 nmdc:dobj-11-w5b9pj56 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9110f0539961af3d86cff48272514ea1 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9110f0539961af3d86cff48272514ea1 nmdc:dobj-11-53pe4z69 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8e48ab3651427233a0e8639fe7b1765 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8e48ab3651427233a0e8639fe7b1765 nmdc:dobj-11-wpavp617 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96f3c17d1ef62aa6c7383866564520d1 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96f3c17d1ef62aa6c7383866564520d1 nmdc:dobj-11-mbnw5f70 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:026ef1543b4d4302c911827dbdd67fec +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:026ef1543b4d4302c911827dbdd67fec nmdc:dobj-11-vzs98r15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6096b432b1ade5524f17d5635a39910c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvffjn80/nmdc:wfrbt-11-jppjwf05.1/nmdc_wfrbt-11-jppjwf05.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6096b432b1ade5524f17d5635a39910c nmdc:dobj-11-ftyn0557 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gvffjn80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jppjwf05.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:611d8b875774b925bb88cfc42231389d nmdc:wfrbt-11-jppjwf05.1 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nmdc:dobj-11-xt918h85 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-1yf90m20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0frapd69.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b325f340b8da596617d7494059edbc22 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1yf90m20/nmdc:wfrqc-11-0frapd69.1/nmdc_wfrqc-11-0frapd69.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b325f340b8da596617d7494059edbc22 nmdc:dobj-11-1wwfw068 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-1yf90m20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0frapd69.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a260737760b5f3e431e5dcf327980d1b nmdc:wfrqc-11-0frapd69.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-1yf90m20 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1yf90m20/nmdc:wfrbt-11-mtyecb51.1/nmdc_wfrbt-11-mtyecb51.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ac3394703831bba2d319ea040dd6e33 nmdc:dobj-11-kyz9nc67 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-1yf90m20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mtyecb51.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bdc150cb565aba6804291806fb2e5480 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1yf90m20/nmdc:wfrbt-11-mtyecb51.1/nmdc_wfrbt-11-mtyecb51.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdc150cb565aba6804291806fb2e5480 nmdc:dobj-11-jcj9gx15 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-1yf90m20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mtyecb51.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d43df591606e63c036855e538603f107 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1yf90m20/nmdc:wfrbt-11-mtyecb51.1/nmdc_wfrbt-11-mtyecb51.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d43df591606e63c036855e538603f107 nmdc:dobj-11-da0hv276 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-1yf90m20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mtyecb51.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9da8131ec45b0f4dc6e9e4338b839eb8 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1yf90m20/nmdc:wfrbt-11-mtyecb51.1/nmdc_wfrbt-11-mtyecb51.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9da8131ec45b0f4dc6e9e4338b839eb8 nmdc:dobj-11-9gmtqw66 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-1yf90m20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mtyecb51.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb2f3be3f25207cae2aceed3f41fc029 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1yf90m20/nmdc:wfrbt-11-mtyecb51.1/nmdc_wfrbt-11-mtyecb51.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb2f3be3f25207cae2aceed3f41fc029 nmdc:dobj-11-s23zd215 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-1yf90m20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mtyecb51.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: 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nmdc:omprc-11-1yf90m20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mtyecb51.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a260737760b5f3e431e5dcf327980d1b nmdc:wfrbt-11-mtyecb51.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-1yf90m20 +INFO:root:omics_processing_id: nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c36ac1e9dc01ebf5e47a891b3515d5fb nmdc:dobj-11-af308g10 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-32hbhj52 +INFO:root:New activity id created for nmdc:omprc-11-32hbhj52 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-kc2y3h46.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-32hbhj52/nmdc:wfrqc-11-kc2y3h46.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d2e38f97492eca5d914f4138c07aa07b +INFO:root:New file path computed 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report for nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e8hgae78.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dfe590f85f32fcdd7e960ae05e0cd71f +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-32hbhj52/nmdc:wfrbt-11-e8hgae78.1/nmdc_wfrbt-11-e8hgae78.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfe590f85f32fcdd7e960ae05e0cd71f nmdc:dobj-11-z86zqm61 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e8hgae78.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1ffb0f5a69283bf74ffe82bc582e1be +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-32hbhj52/nmdc:wfrbt-11-e8hgae78.1/nmdc_wfrbt-11-e8hgae78.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1ffb0f5a69283bf74ffe82bc582e1be nmdc:dobj-11-f869nm35 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e8hgae78.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df5bb98d0c54e4d9cf51ca63866bc442 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-32hbhj52/nmdc:wfrbt-11-e8hgae78.1/nmdc_wfrbt-11-e8hgae78.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df5bb98d0c54e4d9cf51ca63866bc442 nmdc:dobj-11-vg6tfb43 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e8hgae78.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aef2b71b198d05c28d500ccded534fcb +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-32hbhj52/nmdc:wfrbt-11-e8hgae78.1/nmdc_wfrbt-11-e8hgae78.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aef2b71b198d05c28d500ccded534fcb nmdc:dobj-11-hkzvpf45 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e8hgae78.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e146f54bf49faf263f9f7e410848cdcd +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-32hbhj52/nmdc:wfrbt-11-e8hgae78.1/nmdc_wfrbt-11-e8hgae78.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e146f54bf49faf263f9f7e410848cdcd nmdc:dobj-11-y2sk1358 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e8hgae78.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1bf9cd602b2fc6ddee9e533a91aa5e47 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-32hbhj52/nmdc:wfrbt-11-e8hgae78.1/nmdc_wfrbt-11-e8hgae78.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bf9cd602b2fc6ddee9e533a91aa5e47 nmdc:dobj-11-m1m75d15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e8hgae78.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be11c317adac8b7dc52c1cefe4d26f33 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-32hbhj52/nmdc:wfrbt-11-e8hgae78.1/nmdc_wfrbt-11-e8hgae78.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be11c317adac8b7dc52c1cefe4d26f33 nmdc:dobj-11-cxr9ne47 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-32hbhj52 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e8hgae78.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0693501bdd33e232424998461863687d nmdc:wfrbt-11-e8hgae78.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-32hbhj52 +INFO:root:omics_processing_id: nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2053780e4faed7cb530a98fd5b017bd7 nmdc:dobj-11-0j927719 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-w8fjn656 +INFO:root:New activity id created for nmdc:omprc-11-w8fjn656 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fa6daj25.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfrqc-11-fa6daj25.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a30ff6c4372901f526551e871fa0ecdc +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfrqc-11-fa6daj25.1/nmdc_wfrqc-11-fa6daj25.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a30ff6c4372901f526551e871fa0ecdc nmdc:dobj-11-sm58qj92 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fa6daj25.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25ac028c51de826d43f40eb3466ab1b7 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfrqc-11-fa6daj25.1/nmdc_wfrqc-11-fa6daj25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25ac028c51de826d43f40eb3466ab1b7 nmdc:dobj-11-nnpm1m63 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fa6daj25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d7f31fdc5639f2a3081c27373289ce62 nmdc:wfrqc-11-fa6daj25.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-w8fjn656 +INFO:root:New activity id created for nmdc:omprc-11-w8fjn656 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jac1re09.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfmgas-11-jac1re09.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e0f6292c445f2ba8937f27c73f49887d +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfmgas-11-jac1re09.1/nmdc_wfmgas-11-jac1re09.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e0f6292c445f2ba8937f27c73f49887d nmdc:dobj-11-szqat405 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jac1re09.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21153ecd493f8e124f01a550a9fa7a83 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfmgas-11-jac1re09.1/nmdc_wfmgas-11-jac1re09.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21153ecd493f8e124f01a550a9fa7a83 nmdc:dobj-11-792q0337 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jac1re09.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f68e17d1f8fd58f1358ac91fa6a7cfdd +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfmgas-11-jac1re09.1/nmdc_wfmgas-11-jac1re09.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f68e17d1f8fd58f1358ac91fa6a7cfdd nmdc:dobj-11-we7h6w82 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jac1re09.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2cd9dc34e660e36c6a898066a19b8f85 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfmgas-11-jac1re09.1/nmdc_wfmgas-11-jac1re09.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cd9dc34e660e36c6a898066a19b8f85 nmdc:dobj-11-va1bk311 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nmdc_wfrbt-11-8chsgz19.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e12c2b47b34d5d3c86556661451a65d +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfrbt-11-8chsgz19.1/nmdc_wfrbt-11-8chsgz19.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e12c2b47b34d5d3c86556661451a65d nmdc:dobj-11-mvkaxe95 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8chsgz19.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7c4f44a3310391bc1770b87c8e0a6311 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfrbt-11-8chsgz19.1/nmdc_wfrbt-11-8chsgz19.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c4f44a3310391bc1770b87c8e0a6311 nmdc:dobj-11-tgq5x039 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8chsgz19.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae1b4b6792eb5c4c5efb910405bb7a78 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w8fjn656/nmdc:wfrbt-11-8chsgz19.1/nmdc_wfrbt-11-8chsgz19.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae1b4b6792eb5c4c5efb910405bb7a78 nmdc:dobj-11-1qhfz634 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-w8fjn656 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8chsgz19.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d7f31fdc5639f2a3081c27373289ce62 nmdc:wfrbt-11-8chsgz19.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-w8fjn656 +INFO:root:omics_processing_id: nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:542bf743f10f7dfd756f200d2a93d8a2 nmdc:dobj-11-asv32973 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-fkgma293 +INFO:root:New activity id created for nmdc:omprc-11-fkgma293 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-y65qzs65.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrqc-11-y65qzs65.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:efcc105decbdb59dcb6fd3b6d8aaa388 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrqc-11-y65qzs65.1/nmdc_wfrqc-11-y65qzs65.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efcc105decbdb59dcb6fd3b6d8aaa388 nmdc:dobj-11-78r0mp82 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-y65qzs65.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3391d4b6f3e7181492ee8ec106e78d2b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrqc-11-y65qzs65.1/nmdc_wfrqc-11-y65qzs65.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3391d4b6f3e7181492ee8ec106e78d2b nmdc:dobj-11-3nkvmj42 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-y65qzs65.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:43d1a95814b030bc53588692b7854b8a nmdc:wfrqc-11-y65qzs65.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-fkgma293 +INFO:root:New activity id created for nmdc:omprc-11-fkgma293 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-z1by7h30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfmgas-11-z1by7h30.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7211b6377a054df95f078628d9c07f37 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfmgas-11-z1by7h30.1/nmdc_wfmgas-11-z1by7h30.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7211b6377a054df95f078628d9c07f37 nmdc:dobj-11-1weqhr67 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z1by7h30.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f6d3cb559d2b11ade90e61d61c65da9 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfmgas-11-z1by7h30.1/nmdc_wfmgas-11-z1by7h30.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f6d3cb559d2b11ade90e61d61c65da9 nmdc:dobj-11-n38fmv51 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z1by7h30.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9cef56746e1c0722dee226a294e9e498 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfmgas-11-z1by7h30.1/nmdc_wfmgas-11-z1by7h30.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9cef56746e1c0722dee226a294e9e498 nmdc:dobj-11-b023re59 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z1by7h30.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23d9151dbb48fb54cdbdc68241795245 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfmgas-11-z1by7h30.1/nmdc_wfmgas-11-z1by7h30.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23d9151dbb48fb54cdbdc68241795245 nmdc:dobj-11-9by64v40 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z1by7h30.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e738d4cfc662f8ec2f1115f2ababa037 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfmgas-11-z1by7h30.1/nmdc_wfmgas-11-z1by7h30.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e738d4cfc662f8ec2f1115f2ababa037 nmdc:dobj-11-atmhrr05 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eef65b57329e6d020a5768d12fec5bca nmdc:dobj-11-et8n7q77 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab94185ac6ccda1d54fe9ad62cf32512 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrbt-11-9q57xj13.1/nmdc_wfrbt-11-9q57xj13.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab94185ac6ccda1d54fe9ad62cf32512 nmdc:dobj-11-a1j94t65 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:14fc817e6d5aac7f307533a14eee5185 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrbt-11-9q57xj13.1/nmdc_wfrbt-11-9q57xj13.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14fc817e6d5aac7f307533a14eee5185 nmdc:dobj-11-y9823033 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ffa057821c0091ea1784df4b06df6ce5 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrbt-11-9q57xj13.1/nmdc_wfrbt-11-9q57xj13.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ffa057821c0091ea1784df4b06df6ce5 nmdc:dobj-11-jkqyxd19 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff737a139203071c94ef394457fee2ae +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrbt-11-9q57xj13.1/nmdc_wfrbt-11-9q57xj13.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff737a139203071c94ef394457fee2ae nmdc:dobj-11-rn658x75 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d847b74ef0c1153f57550b5616ae97dd +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrbt-11-9q57xj13.1/nmdc_wfrbt-11-9q57xj13.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d847b74ef0c1153f57550b5616ae97dd nmdc:dobj-11-ekk2zk31 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d0ae4ad2537ab71c6c2f48ac75ceb00e +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrbt-11-9q57xj13.1/nmdc_wfrbt-11-9q57xj13.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d0ae4ad2537ab71c6c2f48ac75ceb00e nmdc:dobj-11-b6xcky92 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3116d38438d8e7c6cc337fd9ef518c60 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrbt-11-9q57xj13.1/nmdc_wfrbt-11-9q57xj13.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3116d38438d8e7c6cc337fd9ef518c60 nmdc:dobj-11-csw9bf31 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f64f864f20448bfbb41d9d02dee426c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fkgma293/nmdc:wfrbt-11-9q57xj13.1/nmdc_wfrbt-11-9q57xj13.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f64f864f20448bfbb41d9d02dee426c nmdc:dobj-11-v0ws6638 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-fkgma293 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9q57xj13.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:43d1a95814b030bc53588692b7854b8a nmdc:wfrbt-11-9q57xj13.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-fkgma293 +INFO:root:omics_processing_id: nmdc:omprc-11-71nazq83 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8016d981405f965f63fc11d081fe999d nmdc:dobj-11-f1gkfm45 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-71nazq83 +INFO:root:New activity id created for nmdc:omprc-11-71nazq83 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-bj750087.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-71nazq83/nmdc:wfrqc-11-bj750087.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7efe7a7b24090007d60822a33840dbdc +INFO:root:New file path computed 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nmdc:f3a96c9728ae49829257e8094ee226e9 nmdc:dobj-11-etmbwr35 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-71nazq83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cqnwky66.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c9f40f22aafded704b55c9a811e38da +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-71nazq83/nmdc:wfmgas-11-cqnwky66.1/nmdc_wfmgas-11-cqnwky66.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c9f40f22aafded704b55c9a811e38da nmdc:dobj-11-hb4pct80 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-71nazq83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cqnwky66.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:483147c83ae938326b87a0b21447761f +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-71nazq83/nmdc:wfmgas-11-cqnwky66.1/nmdc_wfmgas-11-cqnwky66.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:483147c83ae938326b87a0b21447761f nmdc:dobj-11-0znnrs34 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-71nazq83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cqnwky66.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:dc884ed2a0b7625413220e905cf8a722 nmdc:wfmgas-11-cqnwky66.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-71nazq83 +INFO:root:New activity id created for nmdc:omprc-11-71nazq83 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-cscb3w57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-71nazq83/nmdc:wfrbt-11-cscb3w57.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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report for nmdc:omprc-11-71nazq83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cscb3w57.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d218b44952f8d4f96d0760d05a78f12 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-71nazq83/nmdc:wfrbt-11-cscb3w57.1/nmdc_wfrbt-11-cscb3w57.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d218b44952f8d4f96d0760d05a78f12 nmdc:dobj-11-12hdwp06 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-71nazq83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cscb3w57.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:916830a0df48ac06efb0a1a720fb55a7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-71nazq83/nmdc:wfrbt-11-cscb3w57.1/nmdc_wfrbt-11-cscb3w57.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:916830a0df48ac06efb0a1a720fb55a7 nmdc:dobj-11-emt19c67 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-71nazq83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cscb3w57.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a2c738b61bfe3041fd611c6e31d69a6 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-71nazq83/nmdc:wfrbt-11-cscb3w57.1/nmdc_wfrbt-11-cscb3w57.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a2c738b61bfe3041fd611c6e31d69a6 nmdc:dobj-11-p2akk585 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-71nazq83 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrqc-11-nw711n68.1/nmdc_wfrqc-11-nw711n68.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a98bca4166af387eb5c37bb6f35a93f8 nmdc:dobj-11-qh1x0m76 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-nw711n68.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bff87afdf41f7697748433f0693ba8d4 nmdc:wfrqc-11-nw711n68.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-e26ty847 +INFO:root:New activity id created for nmdc:omprc-11-e26ty847 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-psqh8410.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfmgas-11-psqh8410.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94cd5122d7b28c673f38e6da7185a735 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfmgas-11-psqh8410.1/nmdc_wfmgas-11-psqh8410.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94cd5122d7b28c673f38e6da7185a735 nmdc:dobj-11-j2ksek13 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-psqh8410.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab6fbfcedf054cb8e9b6912bec26bf12 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfmgas-11-psqh8410.1/nmdc_wfmgas-11-psqh8410.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab6fbfcedf054cb8e9b6912bec26bf12 nmdc:dobj-11-sw6jet95 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: 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nmdc:omprc-11-e26ty847 +INFO:root:New activity id created for nmdc:omprc-11-e26ty847 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-r0kbx873.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6164bec0aea1d0d76fa95d77d535784 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1/nmdc_wfrbt-11-r0kbx873.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6164bec0aea1d0d76fa95d77d535784 nmdc:dobj-11-v0swfn33 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r0kbx873.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3768ed98b2d73978aac75bf468c6f2f9 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1/nmdc_wfrbt-11-r0kbx873.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3768ed98b2d73978aac75bf468c6f2f9 nmdc:dobj-11-jjn6k936 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r0kbx873.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7233cff4201197492640c06006b67b46 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1/nmdc_wfrbt-11-r0kbx873.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7233cff4201197492640c06006b67b46 nmdc:dobj-11-j7ax1s19 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-e26ty847 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1/nmdc_wfrbt-11-r0kbx873.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:69686a06a6c823ee4378b9ff7a52ded3 nmdc:dobj-11-3m1qq763 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r0kbx873.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ccb4df627d1d2406e6ce3ebf96b78ad +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1/nmdc_wfrbt-11-r0kbx873.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ccb4df627d1d2406e6ce3ebf96b78ad nmdc:dobj-11-zkd3m566 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r0kbx873.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f81ae497da1e302bc7635cab65ac67e +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1/nmdc_wfrbt-11-r0kbx873.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f81ae497da1e302bc7635cab65ac67e nmdc:dobj-11-pdmknw69 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r0kbx873.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e8d1244c89775fa64ae4d4da38dd99b5 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1/nmdc_wfrbt-11-r0kbx873.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8d1244c89775fa64ae4d4da38dd99b5 nmdc:dobj-11-59dc3p19 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r0kbx873.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3506f77cb2445b3ebddb0783f5626908 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-e26ty847/nmdc:wfrbt-11-r0kbx873.1/nmdc_wfrbt-11-r0kbx873.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3506f77cb2445b3ebddb0783f5626908 nmdc:dobj-11-sge6gy58 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-e26ty847 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r0kbx873.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:bff87afdf41f7697748433f0693ba8d4 nmdc:wfrbt-11-r0kbx873.1 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nmdc:dobj-11-0ymvk163 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-hqxj2960 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9f79yz97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:116c3515bd2f4dad857c3bfa3a2693dc +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hqxj2960/nmdc:wfrqc-11-9f79yz97.1/nmdc_wfrqc-11-9f79yz97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:116c3515bd2f4dad857c3bfa3a2693dc nmdc:dobj-11-ncvhr773 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-hqxj2960 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9f79yz97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:349efc1d41dd1ab94740600999d92e19 nmdc:wfrqc-11-9f79yz97.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-hqxj2960 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nmdc:omprc-11-hqxj2960 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qh4g6x92.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a08b52e7dd7a3cd8cd4d784e4aa01431 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hqxj2960/nmdc:wfrbt-11-qh4g6x92.1/nmdc_wfrbt-11-qh4g6x92.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a08b52e7dd7a3cd8cd4d784e4aa01431 nmdc:dobj-11-px7fas16 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-hqxj2960 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qh4g6x92.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:becdc273dfdcdbd9b8fd86cf8cd90480 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hqxj2960/nmdc:wfrbt-11-qh4g6x92.1/nmdc_wfrbt-11-qh4g6x92.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:becdc273dfdcdbd9b8fd86cf8cd90480 nmdc:dobj-11-qjjyp508 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-hqxj2960 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qh4g6x92.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:daec1cb54b8a0580cc91c626e8168c90 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hqxj2960/nmdc:wfrbt-11-qh4g6x92.1/nmdc_wfrbt-11-qh4g6x92.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:daec1cb54b8a0580cc91c626e8168c90 nmdc:dobj-11-kwg83b22 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-hqxj2960 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qh4g6x92.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e90cfdf3829df519a4717153b6518821 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hqxj2960/nmdc:wfrbt-11-qh4g6x92.1/nmdc_wfrbt-11-qh4g6x92.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e90cfdf3829df519a4717153b6518821 nmdc:dobj-11-jg6jmk05 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-hqxj2960 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qh4g6x92.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:69f8a923d2f7f96a9d1bef4b89e139fd +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hqxj2960/nmdc:wfrbt-11-qh4g6x92.1/nmdc_wfrbt-11-qh4g6x92.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:69f8a923d2f7f96a9d1bef4b89e139fd nmdc:dobj-11-swbznj36 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-hqxj2960 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qh4g6x92.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:349efc1d41dd1ab94740600999d92e19 nmdc:wfrbt-11-qh4g6x92.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-hqxj2960 +INFO:root:omics_processing_id: nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b32d977bc4635c6bf5396ca01f8a6509 nmdc:dobj-11-43me7245 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-bcznwp25 +INFO:root:New activity id created for nmdc:omprc-11-bcznwp25 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-bsncas03.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrqc-11-bsncas03.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36899f02cc77d8e70ae04a4440c8e738 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrqc-11-bsncas03.1/nmdc_wfrqc-11-bsncas03.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36899f02cc77d8e70ae04a4440c8e738 nmdc:dobj-11-p6khmt82 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bsncas03.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dec22abe2eb2b96dae865a8e0b3e13f2 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrqc-11-bsncas03.1/nmdc_wfrqc-11-bsncas03.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dec22abe2eb2b96dae865a8e0b3e13f2 nmdc:dobj-11-tt67mq91 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bsncas03.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ea0a2d9c566ba7e15898b7ccb54ea744 nmdc:wfrqc-11-bsncas03.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-bcznwp25 +INFO:root:New activity id created for nmdc:omprc-11-bcznwp25 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-nj2v0c60.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfmgas-11-nj2v0c60.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6012850310c7e9bb0012a852eb867038 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfmgas-11-nj2v0c60.1/nmdc_wfmgas-11-nj2v0c60.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6012850310c7e9bb0012a852eb867038 nmdc:dobj-11-cfpe9c54 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nj2v0c60.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab146d7102b371f151b6222db1c1faa1 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfmgas-11-nj2v0c60.1/nmdc_wfmgas-11-nj2v0c60.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab146d7102b371f151b6222db1c1faa1 nmdc:dobj-11-x7sa4365 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nj2v0c60.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:af3bcb0adb16a8293c73583a01d47903 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfmgas-11-nj2v0c60.1/nmdc_wfmgas-11-nj2v0c60.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:af3bcb0adb16a8293c73583a01d47903 nmdc:dobj-11-nxmfqt43 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nj2v0c60.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39f0802e6827626341a7168fdee6db80 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfmgas-11-nj2v0c60.1/nmdc_wfmgas-11-nj2v0c60.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39f0802e6827626341a7168fdee6db80 nmdc:dobj-11-z58xae67 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nj2v0c60.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e91cfe6176af45f24bfc4a6b4d397de +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfmgas-11-nj2v0c60.1/nmdc_wfmgas-11-nj2v0c60.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e91cfe6176af45f24bfc4a6b4d397de nmdc:dobj-11-egs1r233 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nj2v0c60.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ea0a2d9c566ba7e15898b7ccb54ea744 nmdc:wfmgas-11-nj2v0c60.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-bcznwp25 +INFO:root:New activity id created for nmdc:omprc-11-bcznwp25 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-234qeb19.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0532a4ffdc33dca132ad392871714ef +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0532a4ffdc33dca132ad392871714ef nmdc:dobj-11-zz0z4j86 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:616a9499463e3e9ca7e6f7450565c055 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:616a9499463e3e9ca7e6f7450565c055 nmdc:dobj-11-jw6bkm46 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:235910939e685c2fa62de17c1c4c1103 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:235910939e685c2fa62de17c1c4c1103 nmdc:dobj-11-g8xtcz39 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51d2ca7ab268cc1de9389ee1bba56742 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51d2ca7ab268cc1de9389ee1bba56742 nmdc:dobj-11-djrsvr60 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:474aac9aa60777652f1ce8ec210aad9b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:474aac9aa60777652f1ce8ec210aad9b nmdc:dobj-11-1ye5sw33 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39371caa1b4f17ffadd1283555117493 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39371caa1b4f17ffadd1283555117493 nmdc:dobj-11-kbcm7727 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b7e3879e22131395adaf5aa85a6093e +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b7e3879e22131395adaf5aa85a6093e nmdc:dobj-11-3xk0at67 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c4f57b8c119769010bab20ad084ef6a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c4f57b8c119769010bab20ad084ef6a nmdc:dobj-11-fj3xrv24 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09361628af4ed28ec0304b17998d5352 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bcznwp25/nmdc:wfrbt-11-234qeb19.1/nmdc_wfrbt-11-234qeb19.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09361628af4ed28ec0304b17998d5352 nmdc:dobj-11-gex3b451 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-bcznwp25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-234qeb19.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ea0a2d9c566ba7e15898b7ccb54ea744 nmdc:wfrbt-11-234qeb19.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-bcznwp25 +INFO:root:omics_processing_id: nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d42c6ec8149e42bc40930dd5e426dee nmdc:dobj-11-sjzhnj72 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zr692563 +INFO:root:New activity id created for nmdc:omprc-11-zr692563 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mk1ft436.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrqc-11-mk1ft436.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ba1f4e6c3f7fc72cfbcae7ba869ee1f9 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrqc-11-mk1ft436.1/nmdc_wfrqc-11-mk1ft436.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba1f4e6c3f7fc72cfbcae7ba869ee1f9 nmdc:dobj-11-repm5659 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mk1ft436.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8529d61b1a8c28224e972daf2ded72c3 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrqc-11-mk1ft436.1/nmdc_wfrqc-11-mk1ft436.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8529d61b1a8c28224e972daf2ded72c3 nmdc:dobj-11-j9ngfn90 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mk1ft436.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d89aca8e8e95f5f4032b7673d3321efb nmdc:wfrqc-11-mk1ft436.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zr692563 +INFO:root:New activity id created for nmdc:omprc-11-zr692563 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5h1gtr51.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfmgas-11-5h1gtr51.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8199736defcc1717648d5457aeacb39 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfmgas-11-5h1gtr51.1/nmdc_wfmgas-11-5h1gtr51.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8199736defcc1717648d5457aeacb39 nmdc:dobj-11-xddpys41 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5h1gtr51.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5cdb3e41c620111caa129aef252739bd +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfmgas-11-5h1gtr51.1/nmdc_wfmgas-11-5h1gtr51.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5cdb3e41c620111caa129aef252739bd nmdc:dobj-11-vtyq1n49 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5h1gtr51.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb70e645b80848ea4c2ca6323712a0fc +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfmgas-11-5h1gtr51.1/nmdc_wfmgas-11-5h1gtr51.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb70e645b80848ea4c2ca6323712a0fc nmdc:dobj-11-991j4r67 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5h1gtr51.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec4ff6e08c5185aa5227118e08f99184 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfmgas-11-5h1gtr51.1/nmdc_wfmgas-11-5h1gtr51.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec4ff6e08c5185aa5227118e08f99184 nmdc:dobj-11-pgxew044 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrbt-11-yk3k8617.1/nmdc_wfrbt-11-yk3k8617.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c732270d88e6ebea553cd755835bb53c nmdc:dobj-11-5fmg8e58 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk3k8617.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:951999ab65edf73514666dcd89ddbfe7 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrbt-11-yk3k8617.1/nmdc_wfrbt-11-yk3k8617.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:951999ab65edf73514666dcd89ddbfe7 nmdc:dobj-11-0cr0b025 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk3k8617.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6d26de150e4b33d13fd1e275d81bdf2 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrbt-11-yk3k8617.1/nmdc_wfrbt-11-yk3k8617.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6d26de150e4b33d13fd1e275d81bdf2 nmdc:dobj-11-2mrp6980 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk3k8617.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59d51c4fa1ba503a3c57e571cdbfea0b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrbt-11-yk3k8617.1/nmdc_wfrbt-11-yk3k8617.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59d51c4fa1ba503a3c57e571cdbfea0b nmdc:dobj-11-agzayh97 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk3k8617.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:204a9dba52c008bd16ded85590318e33 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrbt-11-yk3k8617.1/nmdc_wfrbt-11-yk3k8617.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:204a9dba52c008bd16ded85590318e33 nmdc:dobj-11-c4j3p218 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk3k8617.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e87639d6d0150df70772a4e54f68acee +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrbt-11-yk3k8617.1/nmdc_wfrbt-11-yk3k8617.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e87639d6d0150df70772a4e54f68acee nmdc:dobj-11-d8s37d88 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk3k8617.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d55b8a200cb8eea97d9bf27d15124104 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrbt-11-yk3k8617.1/nmdc_wfrbt-11-yk3k8617.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d55b8a200cb8eea97d9bf27d15124104 nmdc:dobj-11-5ehmrn37 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk3k8617.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fac02868b360275b13868a7903c07bf6 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr692563/nmdc:wfrbt-11-yk3k8617.1/nmdc_wfrbt-11-yk3k8617.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fac02868b360275b13868a7903c07bf6 nmdc:dobj-11-ek936b07 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zr692563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk3k8617.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d89aca8e8e95f5f4032b7673d3321efb nmdc:wfrbt-11-yk3k8617.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-zr692563 +INFO:root:omics_processing_id: nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d083ea14bad97a71536dd5c5185f5eb3 nmdc:dobj-11-afvav529 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ayjcw905 +INFO:root:New activity id created for nmdc:omprc-11-ayjcw905 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g0cm6t52.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrqc-11-g0cm6t52.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d3e8e220b66351e2fa13373035b5695 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrqc-11-g0cm6t52.1/nmdc_wfrqc-11-g0cm6t52.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d3e8e220b66351e2fa13373035b5695 nmdc:dobj-11-cedbey23 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g0cm6t52.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f38f93c81c4524f1817d56bfa473537b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrqc-11-g0cm6t52.1/nmdc_wfrqc-11-g0cm6t52.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f38f93c81c4524f1817d56bfa473537b nmdc:dobj-11-wm7y4084 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g0cm6t52.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:06e76e5e944f2268aa1c69ee93a3743a nmdc:wfrqc-11-g0cm6t52.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ayjcw905 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrbt-11-fcjdsf79.1/nmdc_wfrbt-11-fcjdsf79.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0d6796c1e0598f3f0d32d1dd8354c7 nmdc:dobj-11-qjd60n64 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fcjdsf79.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb4c74c5fa7331d6579e9c00224f8f40 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrbt-11-fcjdsf79.1/nmdc_wfrbt-11-fcjdsf79.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb4c74c5fa7331d6579e9c00224f8f40 nmdc:dobj-11-wem93221 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fcjdsf79.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4acb373fb81f22e0971f22a5ca9bc75b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrbt-11-fcjdsf79.1/nmdc_wfrbt-11-fcjdsf79.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4acb373fb81f22e0971f22a5ca9bc75b nmdc:dobj-11-25bsbj13 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fcjdsf79.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66da92efe5f6980a70a2abbedbc1fc31 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrbt-11-fcjdsf79.1/nmdc_wfrbt-11-fcjdsf79.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66da92efe5f6980a70a2abbedbc1fc31 nmdc:dobj-11-nvy4qq82 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fcjdsf79.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cbafb37e98edd6d264c491a2230bca16 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrbt-11-fcjdsf79.1/nmdc_wfrbt-11-fcjdsf79.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbafb37e98edd6d264c491a2230bca16 nmdc:dobj-11-t4zvjb86 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fcjdsf79.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29cb5f4c55d975afbb2fcbd01f2f8ca6 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrbt-11-fcjdsf79.1/nmdc_wfrbt-11-fcjdsf79.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29cb5f4c55d975afbb2fcbd01f2f8ca6 nmdc:dobj-11-qytv1h71 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fcjdsf79.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b697111579e21fe926968304ddbad7e1 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ayjcw905/nmdc:wfrbt-11-fcjdsf79.1/nmdc_wfrbt-11-fcjdsf79.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b697111579e21fe926968304ddbad7e1 nmdc:dobj-11-wx4d9870 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ayjcw905 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fcjdsf79.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:06e76e5e944f2268aa1c69ee93a3743a nmdc:wfrbt-11-fcjdsf79.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ayjcw905 +INFO:root:omics_processing_id: nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:473c3368a62939bef1dd0808070ec711 nmdc:dobj-11-b1gz0r87 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-hap3wz75 +INFO:root:New activity id created for nmdc:omprc-11-hap3wz75 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-yzap2q24.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrqc-11-yzap2q24.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9187159887f871ed15cb7fea1afb86d0 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrqc-11-yzap2q24.1/nmdc_wfrqc-11-yzap2q24.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9187159887f871ed15cb7fea1afb86d0 nmdc:dobj-11-1b9v4193 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-yzap2q24.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a30bb754073902c4ec4586cceabf8357 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrqc-11-yzap2q24.1/nmdc_wfrqc-11-yzap2q24.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a30bb754073902c4ec4586cceabf8357 nmdc:dobj-11-2j4f5z06 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-yzap2q24.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e0ea39edb52923316fdd756f84a99970 nmdc:wfrqc-11-yzap2q24.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-hap3wz75 +INFO:root:New activity id created for nmdc:omprc-11-hap3wz75 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-g2wf8j67.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfmgas-11-g2wf8j67.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f47a3a01982ec9834c3739563d7e0ac9 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfmgas-11-g2wf8j67.1/nmdc_wfmgas-11-g2wf8j67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f47a3a01982ec9834c3739563d7e0ac9 nmdc:dobj-11-q0hhex73 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-hap3wz75 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report for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wbb7ma03.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:112f32e4f3ae52f0a92b913e529c6662 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrbt-11-wbb7ma03.1/nmdc_wfrbt-11-wbb7ma03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:112f32e4f3ae52f0a92b913e529c6662 nmdc:dobj-11-pfg06v70 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wbb7ma03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f91de0127a144793c74de4915452921 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrbt-11-wbb7ma03.1/nmdc_wfrbt-11-wbb7ma03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f91de0127a144793c74de4915452921 nmdc:dobj-11-40ppqg49 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wbb7ma03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a04e98f2b0560a40925eb2fd2bac6f1 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrbt-11-wbb7ma03.1/nmdc_wfrbt-11-wbb7ma03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a04e98f2b0560a40925eb2fd2bac6f1 nmdc:dobj-11-111g6z80 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wbb7ma03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d02dedfc40b6b86070eb09684e3ab6f9 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrbt-11-wbb7ma03.1/nmdc_wfrbt-11-wbb7ma03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d02dedfc40b6b86070eb09684e3ab6f9 nmdc:dobj-11-4nd0mq09 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wbb7ma03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5314ab46ad2a0fc96e579a821e0e6b7f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrbt-11-wbb7ma03.1/nmdc_wfrbt-11-wbb7ma03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5314ab46ad2a0fc96e579a821e0e6b7f nmdc:dobj-11-tpc46r83 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wbb7ma03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e9e6c68cfcabdb7905835e81458520c4 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrbt-11-wbb7ma03.1/nmdc_wfrbt-11-wbb7ma03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9e6c68cfcabdb7905835e81458520c4 nmdc:dobj-11-mmss2943 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wbb7ma03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85f3b09e430c7e7c9e75e3b69c174d8d +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hap3wz75/nmdc:wfrbt-11-wbb7ma03.1/nmdc_wfrbt-11-wbb7ma03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85f3b09e430c7e7c9e75e3b69c174d8d nmdc:dobj-11-q6ac0v98 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-hap3wz75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wbb7ma03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e0ea39edb52923316fdd756f84a99970 nmdc:wfrbt-11-wbb7ma03.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-hap3wz75 +INFO:root:omics_processing_id: nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd5210c2646842354da5fcc8332d4b8b nmdc:dobj-11-xenytx16 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-nwztgb75 +INFO:root:New activity id created for nmdc:omprc-11-nwztgb75 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ks65qr03.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrqc-11-ks65qr03.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb6385c47efe0303d6a1154cc31d6eaf +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrqc-11-ks65qr03.1/nmdc_wfrqc-11-ks65qr03.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb6385c47efe0303d6a1154cc31d6eaf nmdc:dobj-11-ppcne392 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ks65qr03.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7fbb5e756f8ddbab3ff0f6c284572baf +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrqc-11-ks65qr03.1/nmdc_wfrqc-11-ks65qr03.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fbb5e756f8ddbab3ff0f6c284572baf nmdc:dobj-11-sd1eh242 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ks65qr03.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d5958e84e37473ce871d822ce5fd1d61 nmdc:wfrqc-11-ks65qr03.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-nwztgb75 +INFO:root:New activity id created for nmdc:omprc-11-nwztgb75 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4xj1v534.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfmgas-11-4xj1v534.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2013e652e50f3c0fdbf1c9a0fb392dc3 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfmgas-11-4xj1v534.1/nmdc_wfmgas-11-4xj1v534.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2013e652e50f3c0fdbf1c9a0fb392dc3 nmdc:dobj-11-jzbpa568 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xj1v534.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fcf2467545d86e1b5ca026ec817bd2b +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfmgas-11-4xj1v534.1/nmdc_wfmgas-11-4xj1v534.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fcf2467545d86e1b5ca026ec817bd2b nmdc:dobj-11-y95fjn45 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xj1v534.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2278c8277e8341fcd6187b875e792f93 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfmgas-11-4xj1v534.1/nmdc_wfmgas-11-4xj1v534.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2278c8277e8341fcd6187b875e792f93 nmdc:dobj-11-7x8v8f04 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xj1v534.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80031bf9b0441e70472e4b11b74245f0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfmgas-11-4xj1v534.1/nmdc_wfmgas-11-4xj1v534.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80031bf9b0441e70472e4b11b74245f0 nmdc:dobj-11-7h43f840 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xj1v534.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d75eb644b588042c86e162f82ba1f8b +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfmgas-11-4xj1v534.1/nmdc_wfmgas-11-4xj1v534.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d75eb644b588042c86e162f82ba1f8b nmdc:dobj-11-4nrhv350 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4xj1v534.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d5958e84e37473ce871d822ce5fd1d61 nmdc:wfmgas-11-4xj1v534.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-nwztgb75 +INFO:root:New activity id created for nmdc:omprc-11-nwztgb75 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-0mh71e63.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ac837057b78b08c9f0e17e78de26641 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ac837057b78b08c9f0e17e78de26641 nmdc:dobj-11-5nnn6j53 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d48bb747a396801f96dc284b4afa81ab +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d48bb747a396801f96dc284b4afa81ab nmdc:dobj-11-dtm58y90 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c3ad3482d2a4d61fd3f8e016aef4634 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c3ad3482d2a4d61fd3f8e016aef4634 nmdc:dobj-11-4v826p72 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61ed5e2ccf9c3e1a8ef873d620b8a85f +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61ed5e2ccf9c3e1a8ef873d620b8a85f nmdc:dobj-11-hk45j931 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d86c05dc3c959f6ee9d4d0a64cf80671 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d86c05dc3c959f6ee9d4d0a64cf80671 nmdc:dobj-11-3as9gt57 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0789268f951f3c8c6d098e28f912c724 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0789268f951f3c8c6d098e28f912c724 nmdc:dobj-11-pdsk6s42 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b3f09903921cb14f7ae4535273afbe2 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b3f09903921cb14f7ae4535273afbe2 nmdc:dobj-11-fbj4v244 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1cdad6afaa37f773b94201b9ff933cc +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1cdad6afaa37f773b94201b9ff933cc nmdc:dobj-11-c64sz236 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8aad04a386d422679d15e3b4b2fdf2ba +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nwztgb75/nmdc:wfrbt-11-0mh71e63.1/nmdc_wfrbt-11-0mh71e63.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8aad04a386d422679d15e3b4b2fdf2ba nmdc:dobj-11-0zgvfj65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-nwztgb75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0mh71e63.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d5958e84e37473ce871d822ce5fd1d61 nmdc:wfrbt-11-0mh71e63.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-nwztgb75 +INFO:root:omics_processing_id: nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad56b8aa7be717be6bcd30b1cc5b18fb nmdc:dobj-11-bq7ws370 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5931w091 +INFO:root:New activity id created for nmdc:omprc-11-5931w091 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9s9y2859.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfrqc-11-9s9y2859.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40e6fb25698e0a6b2b2b1eb56d7f3634 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfrqc-11-9s9y2859.1/nmdc_wfrqc-11-9s9y2859.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40e6fb25698e0a6b2b2b1eb56d7f3634 nmdc:dobj-11-ykv4jm25 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9s9y2859.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e1fb5933a936aba08a954751c7cd2d24 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfrqc-11-9s9y2859.1/nmdc_wfrqc-11-9s9y2859.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e1fb5933a936aba08a954751c7cd2d24 nmdc:dobj-11-z5vf9q35 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9s9y2859.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8468a2fcdfaca60fb1f908fc22968923 nmdc:wfrqc-11-9s9y2859.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5931w091 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfmgas-11-m2ftmc62.1/nmdc_wfmgas-11-m2ftmc62.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0619ff0ce02099141fa49d4471f4996 nmdc:dobj-11-apef2v46 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m2ftmc62.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:abe06278f8ea2e2f3eb2418fdd75d506 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfmgas-11-m2ftmc62.1/nmdc_wfmgas-11-m2ftmc62.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abe06278f8ea2e2f3eb2418fdd75d506 nmdc:dobj-11-zg907v20 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m2ftmc62.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1643698bf1faf6b354dc24620045c30 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfmgas-11-m2ftmc62.1/nmdc_wfmgas-11-m2ftmc62.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1643698bf1faf6b354dc24620045c30 nmdc:dobj-11-bg890f66 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m2ftmc62.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df687d55d8a0b76372d0da237b727c96 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfmgas-11-m2ftmc62.1/nmdc_wfmgas-11-m2ftmc62.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df687d55d8a0b76372d0da237b727c96 nmdc:dobj-11-pk5n8935 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfrbt-11-1k46hv09.1/nmdc_wfrbt-11-1k46hv09.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:30f77efa0fde8b31823c295904f6dd6c nmdc:dobj-11-xvn6qe26 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1k46hv09.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ba3ef166f9642aab06795bf73a29588 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfrbt-11-1k46hv09.1/nmdc_wfrbt-11-1k46hv09.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ba3ef166f9642aab06795bf73a29588 nmdc:dobj-11-r744qx08 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1k46hv09.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:555e1042af306ccc649f5733217a59ff +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfrbt-11-1k46hv09.1/nmdc_wfrbt-11-1k46hv09.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:555e1042af306ccc649f5733217a59ff nmdc:dobj-11-11rx9185 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1k46hv09.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a48c0fb04bf0fb4dc99d47265c9e1b89 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfrbt-11-1k46hv09.1/nmdc_wfrbt-11-1k46hv09.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a48c0fb04bf0fb4dc99d47265c9e1b89 nmdc:dobj-11-jmcsh147 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1k46hv09.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea1b78f54dd5d893fc1ab403e56f9705 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5931w091/nmdc:wfrbt-11-1k46hv09.1/nmdc_wfrbt-11-1k46hv09.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea1b78f54dd5d893fc1ab403e56f9705 nmdc:dobj-11-zfrfpv82 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1k46hv09.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: 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nmdc:omprc-11-5931w091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1k46hv09.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8468a2fcdfaca60fb1f908fc22968923 nmdc:wfrbt-11-1k46hv09.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5931w091 +INFO:root:omics_processing_id: nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:938d346f61089085c1bfa5c47c5a68b4 nmdc:dobj-11-y9txfs60 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-39jgg096 +INFO:root:New activity id created for nmdc:omprc-11-39jgg096 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sdaqxc22.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrqc-11-sdaqxc22.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2907f1ab0b0c864d85469a57daa232cc +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrqc-11-sdaqxc22.1/nmdc_wfrqc-11-sdaqxc22.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2907f1ab0b0c864d85469a57daa232cc nmdc:dobj-11-66hv4357 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sdaqxc22.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43f18483f45388e354e9761d96d901d6 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrqc-11-sdaqxc22.1/nmdc_wfrqc-11-sdaqxc22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43f18483f45388e354e9761d96d901d6 nmdc:dobj-11-qmxm7r77 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: 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nmdc:006324877cad46c9339a154870ba53f6 nmdc:dobj-11-w1k8g188 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h556aq28.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d17748d410880e3aaa64aea46846aa4d +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfmgas-11-h556aq28.1/nmdc_wfmgas-11-h556aq28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d17748d410880e3aaa64aea46846aa4d nmdc:dobj-11-ddf38d41 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h556aq28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66bf530ee44da7948f91c29fdbb6a1f6 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfmgas-11-h556aq28.1/nmdc_wfmgas-11-h556aq28.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66bf530ee44da7948f91c29fdbb6a1f6 nmdc:dobj-11-crn7rh02 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h556aq28.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:f439c06d2ae5369a57a2a27d76993426 nmdc:wfmgas-11-h556aq28.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-39jgg096 +INFO:root:New activity id created for nmdc:omprc-11-39jgg096 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kwc1gr41.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrbt-11-kwc1gr41.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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report for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kwc1gr41.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2be6937cfc4a49d882544cc91eb3e376 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrbt-11-kwc1gr41.1/nmdc_wfrbt-11-kwc1gr41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2be6937cfc4a49d882544cc91eb3e376 nmdc:dobj-11-2e2djn46 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kwc1gr41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18b8c0b3151d4843dc3ccfd369537a02 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrbt-11-kwc1gr41.1/nmdc_wfrbt-11-kwc1gr41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18b8c0b3151d4843dc3ccfd369537a02 nmdc:dobj-11-2sbfs953 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kwc1gr41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78412e6c7058c1c319ee777bbf7d149a +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrbt-11-kwc1gr41.1/nmdc_wfrbt-11-kwc1gr41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78412e6c7058c1c319ee777bbf7d149a nmdc:dobj-11-779bn388 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kwc1gr41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a02f14095ed06e18a1f4ec5c9803a398 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrbt-11-kwc1gr41.1/nmdc_wfrbt-11-kwc1gr41.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a02f14095ed06e18a1f4ec5c9803a398 nmdc:dobj-11-jrwq8k33 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-39jgg096 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kwc1gr41.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f10f0cf7751ab039602f0d2242c65c4 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-39jgg096/nmdc:wfrbt-11-kwc1gr41.1/nmdc_wfrbt-11-kwc1gr41.1_kraken2_classification.tsv 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfmgas-11-ym7fg792.1/nmdc_wfmgas-11-ym7fg792.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:805680281f79146af9fb3415e68972aa nmdc:dobj-11-2xhsyf30 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-yqe15172 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ym7fg792.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:effa6d3dc1bc85d094f7e6ae5e143b35 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfmgas-11-ym7fg792.1/nmdc_wfmgas-11-ym7fg792.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:effa6d3dc1bc85d094f7e6ae5e143b35 nmdc:dobj-11-9xqae624 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-yqe15172 +INFO:nmdc_automation.re_iding.base:new_filename: 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfrbt-11-cdhs7691.1/nmdc_wfrbt-11-cdhs7691.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f8779c53e81ae07711b1f7530a16244 nmdc:dobj-11-x46nct63 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-yqe15172 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cdhs7691.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98e870b9c6d397493c8c62c3e03a48c4 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfrbt-11-cdhs7691.1/nmdc_wfrbt-11-cdhs7691.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98e870b9c6d397493c8c62c3e03a48c4 nmdc:dobj-11-rgyn2z21 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-yqe15172 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfrbt-11-cdhs7691.1/nmdc_wfrbt-11-cdhs7691.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc1de961d0bc502570cbf1723536f048 nmdc:dobj-11-vg1d8y69 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-yqe15172 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cdhs7691.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3c4812c6a5823c6ee1936f90a48a25c0 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfrbt-11-cdhs7691.1/nmdc_wfrbt-11-cdhs7691.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c4812c6a5823c6ee1936f90a48a25c0 nmdc:dobj-11-6qe0vj61 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-yqe15172 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cdhs7691.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3bf4192f1d4a244b3010d630b6bac2a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfrbt-11-cdhs7691.1/nmdc_wfrbt-11-cdhs7691.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3bf4192f1d4a244b3010d630b6bac2a nmdc:dobj-11-rxbdaz65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-yqe15172 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cdhs7691.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:95750583bf4411e287d98f861ab03cd2 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfrbt-11-cdhs7691.1/nmdc_wfrbt-11-cdhs7691.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:95750583bf4411e287d98f861ab03cd2 nmdc:dobj-11-4bfk8j35 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-yqe15172 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cdhs7691.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7c01002a68b4fc194440c320ff53db7 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yqe15172/nmdc:wfrbt-11-cdhs7691.1/nmdc_wfrbt-11-cdhs7691.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7c01002a68b4fc194440c320ff53db7 nmdc:dobj-11-23ssy781 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-yqe15172 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cdhs7691.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c0a45d30b0a37b432ee5f2aadb6c407c nmdc:wfrbt-11-cdhs7691.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-yqe15172 +INFO:root:omics_processing_id: nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf40f5c64f1ad14aea338577c1f0519e nmdc:dobj-11-3sm3ma56 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-g9n2k085 +INFO:root:New activity id created for nmdc:omprc-11-g9n2k085 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-c65d6t94.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrqc-11-c65d6t94.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df7139a7f34350602a24e41283e07ed6 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrqc-11-c65d6t94.1/nmdc_wfrqc-11-c65d6t94.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df7139a7f34350602a24e41283e07ed6 nmdc:dobj-11-3vwj7561 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-c65d6t94.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd5a35fa7e5b8edd114dfbcce7c9dc62 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrqc-11-c65d6t94.1/nmdc_wfrqc-11-c65d6t94.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd5a35fa7e5b8edd114dfbcce7c9dc62 nmdc:dobj-11-rc3xxf33 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-c65d6t94.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:7c3a3de094a7d4a160354ff0f4916ff5 nmdc:wfrqc-11-c65d6t94.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-g9n2k085 +INFO:root:New activity id created for nmdc:omprc-11-g9n2k085 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-n1p4mr15.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfmgas-11-n1p4mr15.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e5cf5cf243d62cf9215f90a6374f699 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfmgas-11-n1p4mr15.1/nmdc_wfmgas-11-n1p4mr15.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e5cf5cf243d62cf9215f90a6374f699 nmdc:dobj-11-wsfqne80 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n1p4mr15.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ff6d2727a77162545efe0cf893815dd +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfmgas-11-n1p4mr15.1/nmdc_wfmgas-11-n1p4mr15.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ff6d2727a77162545efe0cf893815dd nmdc:dobj-11-yet1z329 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n1p4mr15.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48c0ac6f083f99b80d9c4fc0d64455f6 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfmgas-11-n1p4mr15.1/nmdc_wfmgas-11-n1p4mr15.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48c0ac6f083f99b80d9c4fc0d64455f6 nmdc:dobj-11-4v7hx490 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n1p4mr15.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7c190e604b412a696ee819f311148fb7 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfmgas-11-n1p4mr15.1/nmdc_wfmgas-11-n1p4mr15.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c190e604b412a696ee819f311148fb7 nmdc:dobj-11-yqwd1r72 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n1p4mr15.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13eddb2bf02c9746236f078825ae0e36 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfmgas-11-n1p4mr15.1/nmdc_wfmgas-11-n1p4mr15.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13eddb2bf02c9746236f078825ae0e36 nmdc:dobj-11-xg73m090 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n1p4mr15.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:7c3a3de094a7d4a160354ff0f4916ff5 nmdc:wfmgas-11-n1p4mr15.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-g9n2k085 +INFO:root:New activity id created for nmdc:omprc-11-g9n2k085 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-w3n91277.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e9496f0b21b87a64d8bc2b1834dd6d23 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9496f0b21b87a64d8bc2b1834dd6d23 nmdc:dobj-11-ahsa6a43 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cae710a5d57a933f9d25531ad75f81d4 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cae710a5d57a933f9d25531ad75f81d4 nmdc:dobj-11-s2gf6x20 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d982ed173de5a9f81efe67edc8bdc29d +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d982ed173de5a9f81efe67edc8bdc29d nmdc:dobj-11-en3c6t84 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1983b6a0303b9749d3379b9b165dfd7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1983b6a0303b9749d3379b9b165dfd7 nmdc:dobj-11-sxzrba15 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48c62f4958bad5ac527c81986bb37954 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48c62f4958bad5ac527c81986bb37954 nmdc:dobj-11-483eyy43 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24aa6bfb442a9b87cfb55d197e6f4b6e +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24aa6bfb442a9b87cfb55d197e6f4b6e nmdc:dobj-11-sngfce20 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d39628480d505ab6fe414093a78aec9 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d39628480d505ab6fe414093a78aec9 nmdc:dobj-11-g9c59k16 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e087ae51c9017fbd2ee83c87ffdbde50 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e087ae51c9017fbd2ee83c87ffdbde50 nmdc:dobj-11-jt5zc139 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74e26b9064666c97fff5b0e4ea04587f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9n2k085/nmdc:wfrbt-11-w3n91277.1/nmdc_wfrbt-11-w3n91277.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74e26b9064666c97fff5b0e4ea04587f nmdc:dobj-11-crzb7k65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g9n2k085 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w3n91277.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7c3a3de094a7d4a160354ff0f4916ff5 nmdc:wfrbt-11-w3n91277.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-g9n2k085 +INFO:root:omics_processing_id: nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23021128e5cb499b365ed93cd2ba0090 nmdc:dobj-11-pxyjzd53 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-hz4jc252 +INFO:root:New activity id created for nmdc:omprc-11-hz4jc252 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-jfbr2m76.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrqc-11-jfbr2m76.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40ebbae96dc7fc068c89011644cb3838 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrqc-11-jfbr2m76.1/nmdc_wfrqc-11-jfbr2m76.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40ebbae96dc7fc068c89011644cb3838 nmdc:dobj-11-z8y64889 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jfbr2m76.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4e95f26f8c2484bd92938da21eb8502 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrqc-11-jfbr2m76.1/nmdc_wfrqc-11-jfbr2m76.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4e95f26f8c2484bd92938da21eb8502 nmdc:dobj-11-9jka2012 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jfbr2m76.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:7d506a7d2ba1d5802b72a5553f679502 nmdc:wfrqc-11-jfbr2m76.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-hz4jc252 +INFO:root:New activity id created for nmdc:omprc-11-hz4jc252 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-q29cr027.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfmgas-11-q29cr027.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3fc2f35db0f613b716ca1efde88ce92 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfmgas-11-q29cr027.1/nmdc_wfmgas-11-q29cr027.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3fc2f35db0f613b716ca1efde88ce92 nmdc:dobj-11-tgnk0z63 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q29cr027.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:20050d471e050a264fcdb19daa740fbe +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfmgas-11-q29cr027.1/nmdc_wfmgas-11-q29cr027.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20050d471e050a264fcdb19daa740fbe nmdc:dobj-11-rvbk0q16 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q29cr027.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f27b091d78083115590b175092cbda34 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfmgas-11-q29cr027.1/nmdc_wfmgas-11-q29cr027.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f27b091d78083115590b175092cbda34 nmdc:dobj-11-3ar5mv70 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q29cr027.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:910d68b394d1c440c09619773a211e08 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfmgas-11-q29cr027.1/nmdc_wfmgas-11-q29cr027.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:910d68b394d1c440c09619773a211e08 nmdc:dobj-11-s99z3597 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q29cr027.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f1c2e347bba6c23fcc6d68ddb6ea1c46 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfmgas-11-q29cr027.1/nmdc_wfmgas-11-q29cr027.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1c2e347bba6c23fcc6d68ddb6ea1c46 nmdc:dobj-11-jf7v4r43 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q29cr027.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:7d506a7d2ba1d5802b72a5553f679502 nmdc:wfmgas-11-q29cr027.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-hz4jc252 +INFO:root:New activity id created for nmdc:omprc-11-hz4jc252 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-fd1zvz61.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4285d62e67f9ba9ecfaed28c0403d7c8 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4285d62e67f9ba9ecfaed28c0403d7c8 nmdc:dobj-11-5zywsf29 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8a77727ac4d93c3fa3f4b6c7e8527a8 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8a77727ac4d93c3fa3f4b6c7e8527a8 nmdc:dobj-11-cydq9s32 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:238e15ce75c41cdbb8f4d7e86f281ac9 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:238e15ce75c41cdbb8f4d7e86f281ac9 nmdc:dobj-11-b93v9k10 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36a74f8995dce8122bb59d66de5f75c8 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36a74f8995dce8122bb59d66de5f75c8 nmdc:dobj-11-4yy1a274 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:516bc8aea74b257463418fc3f19c34a5 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:516bc8aea74b257463418fc3f19c34a5 nmdc:dobj-11-dx6tqk97 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9df36c4e6004f1c4d6ff5342bca28945 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9df36c4e6004f1c4d6ff5342bca28945 nmdc:dobj-11-rgwr8r36 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6919bd610e0777b678b0f8059c710155 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6919bd610e0777b678b0f8059c710155 nmdc:dobj-11-rj976v68 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:718c9cf410f776a1e522ed3a71d6537f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:718c9cf410f776a1e522ed3a71d6537f nmdc:dobj-11-t2g2gc59 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65ce17dc986f5c59d7072c9d9a170c68 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hz4jc252/nmdc:wfrbt-11-fd1zvz61.1/nmdc_wfrbt-11-fd1zvz61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65ce17dc986f5c59d7072c9d9a170c68 nmdc:dobj-11-q0kh6s88 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-hz4jc252 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd1zvz61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7d506a7d2ba1d5802b72a5553f679502 nmdc:wfrbt-11-fd1zvz61.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-hz4jc252 +INFO:root:omics_processing_id: nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00c588f48981d15cbd05923f7577c6f1 nmdc:dobj-11-rwcke329 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m09ghg21 +INFO:root:New activity id created for nmdc:omprc-11-m09ghg21 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9fps1125.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrqc-11-9fps1125.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ad86890af3c256044e74cd7f12ceb6e +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrqc-11-9fps1125.1/nmdc_wfrqc-11-9fps1125.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ad86890af3c256044e74cd7f12ceb6e nmdc:dobj-11-mth9kb69 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9fps1125.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed6bc2204915c2404f5aad17d806fd98 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrqc-11-9fps1125.1/nmdc_wfrqc-11-9fps1125.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed6bc2204915c2404f5aad17d806fd98 nmdc:dobj-11-d6ffhb81 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9fps1125.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:29088ce9f3c19a82a2c81b6fb4cc97e9 nmdc:wfrqc-11-9fps1125.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m09ghg21 +INFO:root:New activity id created for nmdc:omprc-11-m09ghg21 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-a3689p45.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfmgas-11-a3689p45.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a39661554972463b4017d48e4161e8f6 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfmgas-11-a3689p45.1/nmdc_wfmgas-11-a3689p45.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a39661554972463b4017d48e4161e8f6 nmdc:dobj-11-vyye8h96 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a3689p45.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b4f0c2df3f1acc9fd14baba438330c9 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfmgas-11-a3689p45.1/nmdc_wfmgas-11-a3689p45.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b4f0c2df3f1acc9fd14baba438330c9 nmdc:dobj-11-aspdyh30 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a3689p45.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:535fc2d513fbef1b3f7548a6968e5f7a +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfmgas-11-a3689p45.1/nmdc_wfmgas-11-a3689p45.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:535fc2d513fbef1b3f7548a6968e5f7a nmdc:dobj-11-3y4msg21 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a3689p45.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f1fe013705491cbee6115cbc0838b4a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfmgas-11-a3689p45.1/nmdc_wfmgas-11-a3689p45.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f1fe013705491cbee6115cbc0838b4a nmdc:dobj-11-55d9vw98 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a3689p45.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d7fdcac530d0fe76612720a3ce6e8fbd +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfmgas-11-a3689p45.1/nmdc_wfmgas-11-a3689p45.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7fdcac530d0fe76612720a3ce6e8fbd nmdc:dobj-11-53m74f76 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a3689p45.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:29088ce9f3c19a82a2c81b6fb4cc97e9 nmdc:wfmgas-11-a3689p45.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m09ghg21 +INFO:root:New activity id created for nmdc:omprc-11-m09ghg21 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-y1v3zw15.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd7929ed905e2fd55141baeef7ea0ee4 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd7929ed905e2fd55141baeef7ea0ee4 nmdc:dobj-11-3h6kpt07 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6774328e8fd53b32a7ad2d5c18905521 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6774328e8fd53b32a7ad2d5c18905521 nmdc:dobj-11-9ptnc777 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0461ebe8863d2e3f692088c1ce904ea4 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0461ebe8863d2e3f692088c1ce904ea4 nmdc:dobj-11-c1pbk644 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c00b59d5ebf8796ccd063d6729165be5 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c00b59d5ebf8796ccd063d6729165be5 nmdc:dobj-11-grzr7077 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd77c4d3ab3d5af3bbcbf09a79740817 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd77c4d3ab3d5af3bbcbf09a79740817 nmdc:dobj-11-wxwrtd71 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b2f2ccc4e0a8881327166b9de62ef67f +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2f2ccc4e0a8881327166b9de62ef67f nmdc:dobj-11-nva88r82 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74491bcb109ce6623ff9b66cf91998c4 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74491bcb109ce6623ff9b66cf91998c4 nmdc:dobj-11-nv4pky05 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2887354241af7e335fc0cdf37e7ef8db +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2887354241af7e335fc0cdf37e7ef8db nmdc:dobj-11-nejxh046 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c363cc21c6c8a699b54de7ef340afc41 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m09ghg21/nmdc:wfrbt-11-y1v3zw15.1/nmdc_wfrbt-11-y1v3zw15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c363cc21c6c8a699b54de7ef340afc41 nmdc:dobj-11-5h4ky773 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m09ghg21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y1v3zw15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:29088ce9f3c19a82a2c81b6fb4cc97e9 nmdc:wfrbt-11-y1v3zw15.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m09ghg21 +INFO:root:omics_processing_id: nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c9716a26890ae553d9faa59d08cf4d5 nmdc:dobj-11-xdchbk20 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-rfprax08 +INFO:root:New activity id created for nmdc:omprc-11-rfprax08 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9a6h9m13.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrqc-11-9a6h9m13.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4588d2c6ad8e466b913dd532f731508 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrqc-11-9a6h9m13.1/nmdc_wfrqc-11-9a6h9m13.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4588d2c6ad8e466b913dd532f731508 nmdc:dobj-11-hk0mcq53 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9a6h9m13.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eae6f2cfe59f97bd988c933789d84d17 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrqc-11-9a6h9m13.1/nmdc_wfrqc-11-9a6h9m13.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eae6f2cfe59f97bd988c933789d84d17 nmdc:dobj-11-q1zv7k87 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9a6h9m13.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4b28818dbf51fdb368603f061714bd0c nmdc:wfrqc-11-9a6h9m13.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-rfprax08 +INFO:root:New activity id created for nmdc:omprc-11-rfprax08 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-r2mr0h63.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfmgas-11-r2mr0h63.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:17de69da5acd9a54b2fb05fd5a2a1b1a +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfmgas-11-r2mr0h63.1/nmdc_wfmgas-11-r2mr0h63.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:17de69da5acd9a54b2fb05fd5a2a1b1a nmdc:dobj-11-gr7awd61 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r2mr0h63.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aaba5b64e6e275ff7a9b69d8c13a0a2a +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfmgas-11-r2mr0h63.1/nmdc_wfmgas-11-r2mr0h63.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aaba5b64e6e275ff7a9b69d8c13a0a2a nmdc:dobj-11-440nee15 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r2mr0h63.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9d580bfa7d120f9a480be9d7f88b16b +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfmgas-11-r2mr0h63.1/nmdc_wfmgas-11-r2mr0h63.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9d580bfa7d120f9a480be9d7f88b16b nmdc:dobj-11-e6pbx576 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r2mr0h63.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cfb51a68289da3de3802dbcf5744b6c0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfmgas-11-r2mr0h63.1/nmdc_wfmgas-11-r2mr0h63.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfb51a68289da3de3802dbcf5744b6c0 nmdc:dobj-11-g1r4vw88 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r2mr0h63.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bbbf00ce262e1df0299c3a9729513ec +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfmgas-11-r2mr0h63.1/nmdc_wfmgas-11-r2mr0h63.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bbbf00ce262e1df0299c3a9729513ec nmdc:dobj-11-c5va3t37 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r2mr0h63.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4b28818dbf51fdb368603f061714bd0c nmdc:wfmgas-11-r2mr0h63.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-rfprax08 +INFO:root:New activity id created for nmdc:omprc-11-rfprax08 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8s4fgt39.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c67604aa9e94852f026b95166be9befa +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67604aa9e94852f026b95166be9befa nmdc:dobj-11-rky5hh94 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c82e02adf3407080f1fa99cefc4cd503 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c82e02adf3407080f1fa99cefc4cd503 nmdc:dobj-11-7kb74038 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f4cb0e6776d0eab7f1383ef8a118e338 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f4cb0e6776d0eab7f1383ef8a118e338 nmdc:dobj-11-pfq0vy72 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59ff6812939706e0436690481f5ab96d +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59ff6812939706e0436690481f5ab96d nmdc:dobj-11-tkrfpp92 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:83eb6e886cc9ce7079d627869f8fe01c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83eb6e886cc9ce7079d627869f8fe01c nmdc:dobj-11-57wh1216 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7334ba0460d8d4767386aad599698096 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7334ba0460d8d4767386aad599698096 nmdc:dobj-11-b33y4w85 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31f7ac372e322bbafb2817fa5e7679f3 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31f7ac372e322bbafb2817fa5e7679f3 nmdc:dobj-11-jc49h026 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1007571bb8590db2bbe9b52b11e3c614 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1007571bb8590db2bbe9b52b11e3c614 nmdc:dobj-11-cfrm5a65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6cd588384b75f1e0f9433ea4bbd18e02 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rfprax08/nmdc:wfrbt-11-8s4fgt39.1/nmdc_wfrbt-11-8s4fgt39.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6cd588384b75f1e0f9433ea4bbd18e02 nmdc:dobj-11-yr6w7c67 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-rfprax08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8s4fgt39.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4b28818dbf51fdb368603f061714bd0c nmdc:wfrbt-11-8s4fgt39.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-rfprax08 +INFO:root:omics_processing_id: nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fda8884ae9e2cd51d03483310ea883b9 nmdc:dobj-11-9zn4qa73 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a68j4w08 +INFO:root:New activity id created for nmdc:omprc-11-a68j4w08 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-6xa7v403.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfrqc-11-6xa7v403.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b323c9bc97f3829b15b593eb7b90cc81 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfrqc-11-6xa7v403.1/nmdc_wfrqc-11-6xa7v403.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b323c9bc97f3829b15b593eb7b90cc81 nmdc:dobj-11-afg4f410 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6xa7v403.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b9045e999bf86576d8f8a8782cae0514 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfrqc-11-6xa7v403.1/nmdc_wfrqc-11-6xa7v403.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9045e999bf86576d8f8a8782cae0514 nmdc:dobj-11-bdc4bx48 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6xa7v403.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fa545fc704bb7ce470e6c42e06240cda nmdc:wfrqc-11-6xa7v403.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-a68j4w08 +INFO:root:New activity id created for nmdc:omprc-11-a68j4w08 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rscbvb10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfmgas-11-rscbvb10.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0830ac7bc523cc4c4743958f437e8948 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfmgas-11-rscbvb10.1/nmdc_wfmgas-11-rscbvb10.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0830ac7bc523cc4c4743958f437e8948 nmdc:dobj-11-41a4p988 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a68j4w08 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nmdc:cb0d94ccadd5501ff6909f8f93cdf548 nmdc:dobj-11-9fegbv13 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rscbvb10.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24b872bcc7ff33c9b623434645da463a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfmgas-11-rscbvb10.1/nmdc_wfmgas-11-rscbvb10.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24b872bcc7ff33c9b623434645da463a nmdc:dobj-11-j8w6gg85 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rscbvb10.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:20257484dc8a05cba11a486e64096532 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfmgas-11-rscbvb10.1/nmdc_wfmgas-11-rscbvb10.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20257484dc8a05cba11a486e64096532 nmdc:dobj-11-f8qfat49 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rscbvb10.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:fa545fc704bb7ce470e6c42e06240cda nmdc:wfmgas-11-rscbvb10.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-a68j4w08 +INFO:root:New activity id created for nmdc:omprc-11-a68j4w08 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ygzp6j89.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfrbt-11-ygzp6j89.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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report for nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygzp6j89.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd809dcbdecb56883a18387a840b8b5e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfrbt-11-ygzp6j89.1/nmdc_wfrbt-11-ygzp6j89.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd809dcbdecb56883a18387a840b8b5e nmdc:dobj-11-ssnbq240 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygzp6j89.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9ef4724d2a7e03324a48265ba2925d8a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfrbt-11-ygzp6j89.1/nmdc_wfrbt-11-ygzp6j89.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ef4724d2a7e03324a48265ba2925d8a nmdc:dobj-11-vv8xdg32 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a68j4w08 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ygzp6j89.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d15b9d1112dd9c8d48f965aaf815d2cc +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a68j4w08/nmdc:wfrbt-11-ygzp6j89.1/nmdc_wfrbt-11-ygzp6j89.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d15b9d1112dd9c8d48f965aaf815d2cc nmdc:dobj-11-fy3gt542 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a68j4w08 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xnxj0387/nmdc:wfmgas-11-zpke6883.1/nmdc_wfmgas-11-zpke6883.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f82a54eb8905b30177e3b8345464389 nmdc:dobj-11-xaq37j25 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-xnxj0387 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zpke6883.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02702c292e55b46a3392938af43216de +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xnxj0387/nmdc:wfmgas-11-zpke6883.1/nmdc_wfmgas-11-zpke6883.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02702c292e55b46a3392938af43216de nmdc:dobj-11-an90v681 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-xnxj0387 +INFO:nmdc_automation.re_iding.base:new_filename: 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xnxj0387/nmdc:wfrbt-11-ch08k527.1/nmdc_wfrbt-11-ch08k527.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7f158dd995bdb07dd3fe9b765b51ef0 nmdc:dobj-11-2fjytd13 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-xnxj0387 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ch08k527.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:289f073166fb44aa7e30fe7b0be1310b +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xnxj0387/nmdc:wfrbt-11-ch08k527.1/nmdc_wfrbt-11-ch08k527.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:289f073166fb44aa7e30fe7b0be1310b nmdc:dobj-11-1zmwka56 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-xnxj0387 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nmdc_wfrbt-11-ch08k527.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:68306e5004e58078545ed52039ea4297 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xnxj0387/nmdc:wfrbt-11-ch08k527.1/nmdc_wfrbt-11-ch08k527.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68306e5004e58078545ed52039ea4297 nmdc:dobj-11-sa8c6b81 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-xnxj0387 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ch08k527.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50360a9aa4faf639a4c748db62a5217f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xnxj0387/nmdc:wfrbt-11-ch08k527.1/nmdc_wfrbt-11-ch08k527.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50360a9aa4faf639a4c748db62a5217f nmdc:dobj-11-wvkfkv60 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-xnxj0387 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ch08k527.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:202315a0d2bd3fe0364c579143d5e7e5 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xnxj0387/nmdc:wfrbt-11-ch08k527.1/nmdc_wfrbt-11-ch08k527.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:202315a0d2bd3fe0364c579143d5e7e5 nmdc:dobj-11-00bdvv84 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-xnxj0387 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ch08k527.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:86ccadae811e01ecf8c701228b22b384 nmdc:wfrbt-11-ch08k527.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfmgas-11-w3c8s171.1/nmdc_wfmgas-11-w3c8s171.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2c4a66dd163fbb0073a580fa36d65e5 nmdc:dobj-11-ac1j8t17 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w3c8s171.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee6a929ce8072effe3e64c8466db7a29 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfmgas-11-w3c8s171.1/nmdc_wfmgas-11-w3c8s171.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee6a929ce8072effe3e64c8466db7a29 nmdc:dobj-11-sd56g492 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w3c8s171.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74c6e24286c53e56fb5de0792beabd2b +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfmgas-11-w3c8s171.1/nmdc_wfmgas-11-w3c8s171.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74c6e24286c53e56fb5de0792beabd2b nmdc:dobj-11-e3x95p78 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w3c8s171.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:565527f95d29d86fc75493910e0b5eb8 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfmgas-11-w3c8s171.1/nmdc_wfmgas-11-w3c8s171.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:565527f95d29d86fc75493910e0b5eb8 nmdc:dobj-11-tfatnx29 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfrbt-11-cnezrw25.1/nmdc_wfrbt-11-cnezrw25.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cce1947a2f31cc1b5c574818540ce1f5 nmdc:dobj-11-20c3d479 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cnezrw25.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:851b48b8b3303468660e861a43f52e5e +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfrbt-11-cnezrw25.1/nmdc_wfrbt-11-cnezrw25.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:851b48b8b3303468660e861a43f52e5e nmdc:dobj-11-qd160w67 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cnezrw25.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd3e855f0e10c051079309239559812f +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfrbt-11-cnezrw25.1/nmdc_wfrbt-11-cnezrw25.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd3e855f0e10c051079309239559812f nmdc:dobj-11-w2mg4k23 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cnezrw25.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a77f8b18cf9fccef3ff2a92cfec75536 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfrbt-11-cnezrw25.1/nmdc_wfrbt-11-cnezrw25.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a77f8b18cf9fccef3ff2a92cfec75536 nmdc:dobj-11-8pb1ew15 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cnezrw25.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e24f89c0cd24fee648ae4bdfd9ead282 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfrbt-11-cnezrw25.1/nmdc_wfrbt-11-cnezrw25.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e24f89c0cd24fee648ae4bdfd9ead282 nmdc:dobj-11-gsvrr830 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cnezrw25.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c94ae6173428dfb66fbfde108cb656c4 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfrbt-11-cnezrw25.1/nmdc_wfrbt-11-cnezrw25.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c94ae6173428dfb66fbfde108cb656c4 nmdc:dobj-11-srq6az03 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cnezrw25.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c5871468905e780cb41fdfa55c45e6f2 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5s2eha27/nmdc:wfrbt-11-cnezrw25.1/nmdc_wfrbt-11-cnezrw25.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5871468905e780cb41fdfa55c45e6f2 nmdc:dobj-11-1nz1ae42 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5s2eha27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cnezrw25.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b8ad51398e656548aed73cf2a0e65f20 nmdc:wfrbt-11-cnezrw25.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5s2eha27 +INFO:root:omics_processing_id: nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:362f68ee88989bd6c74ce6202a991e74 nmdc:dobj-11-ajh3cw97 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ap39kt56 +INFO:root:New activity id created for nmdc:omprc-11-ap39kt56 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vawk3q97.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfrqc-11-vawk3q97.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9ef5ae6facbbf465414f58ced679ec52 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfrqc-11-vawk3q97.1/nmdc_wfrqc-11-vawk3q97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ef5ae6facbbf465414f58ced679ec52 nmdc:dobj-11-fehre957 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vawk3q97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b19fb4528e42b384da9e2807cab50d2 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfrqc-11-vawk3q97.1/nmdc_wfrqc-11-vawk3q97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b19fb4528e42b384da9e2807cab50d2 nmdc:dobj-11-cevbhe54 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vawk3q97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c59c024abd875b58fc1211aa87a859c8 nmdc:wfrqc-11-vawk3q97.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ap39kt56 +INFO:root:New activity id created for nmdc:omprc-11-ap39kt56 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-zw9k9h56.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfmgas-11-zw9k9h56.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dde51aa9c5e2486101b8804829df0f44 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfmgas-11-zw9k9h56.1/nmdc_wfmgas-11-zw9k9h56.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dde51aa9c5e2486101b8804829df0f44 nmdc:dobj-11-jx8yqq60 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ap39kt56 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nmdc:ea3fb83c4e83fa49f9468cb3b0e3c8c4 nmdc:dobj-11-ybjjhx06 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zw9k9h56.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09f9a5ceb4f69bc4ab6dac70d6c2ea1f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfmgas-11-zw9k9h56.1/nmdc_wfmgas-11-zw9k9h56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09f9a5ceb4f69bc4ab6dac70d6c2ea1f nmdc:dobj-11-56msm659 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zw9k9h56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4aeba0cc6f3be6621e6c047cf3422b9a +INFO:root:New file path computed for Assembly Coverage BAM: 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report for nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x97keh89.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51251a271c6da1c6aeda2571a8e8841e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfrbt-11-x97keh89.1/nmdc_wfrbt-11-x97keh89.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51251a271c6da1c6aeda2571a8e8841e nmdc:dobj-11-4drq6c47 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x97keh89.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1044505b70fdf4b08655f78c0fe0b5a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfrbt-11-x97keh89.1/nmdc_wfrbt-11-x97keh89.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1044505b70fdf4b08655f78c0fe0b5a nmdc:dobj-11-n27a8118 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x97keh89.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:944d94eaa4b8a7bc139ee0bd4dd6905c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfrbt-11-x97keh89.1/nmdc_wfrbt-11-x97keh89.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:944d94eaa4b8a7bc139ee0bd4dd6905c nmdc:dobj-11-fztsrc76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ap39kt56 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+INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ap39kt56/nmdc:wfrbt-11-x97keh89.1/nmdc_wfrbt-11-x97keh89.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a0a2538331dafe673ebaf227479a2a2 nmdc:dobj-11-57defx13 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ap39kt56 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x97keh89.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c59c024abd875b58fc1211aa87a859c8 nmdc:wfrbt-11-x97keh89.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ap39kt56 +INFO:root:omics_processing_id: nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8091e742f19fb03643595ed2d23f9502 nmdc:dobj-11-17xz0014 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ckb6rr81 +INFO:root:New activity id created for nmdc:omprc-11-ckb6rr81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-m2z4ds79.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrqc-11-m2z4ds79.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac5a01adb831a11c34d120a1ec53761f +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrqc-11-m2z4ds79.1/nmdc_wfrqc-11-m2z4ds79.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac5a01adb831a11c34d120a1ec53761f nmdc:dobj-11-09txg732 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-m2z4ds79.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac78092a104bfbff706a787a852a694a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrqc-11-m2z4ds79.1/nmdc_wfrqc-11-m2z4ds79.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac78092a104bfbff706a787a852a694a nmdc:dobj-11-09p3ms98 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-m2z4ds79.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1f7976f270dba12a6b312967202f3168 nmdc:wfrqc-11-m2z4ds79.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ckb6rr81 +INFO:root:New activity id created for nmdc:omprc-11-ckb6rr81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ndx71908.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfmgas-11-ndx71908.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc06be19f09b87737dcd9019b0044011 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfmgas-11-ndx71908.1/nmdc_wfmgas-11-ndx71908.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc06be19f09b87737dcd9019b0044011 nmdc:dobj-11-6k5t7998 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ndx71908.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1d379e31bec8d52688f1a8128f0aa6e9 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfmgas-11-ndx71908.1/nmdc_wfmgas-11-ndx71908.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d379e31bec8d52688f1a8128f0aa6e9 nmdc:dobj-11-7ztk0818 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ndx71908.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b7e748dff3a072f7157886d7f752019 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfmgas-11-ndx71908.1/nmdc_wfmgas-11-ndx71908.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b7e748dff3a072f7157886d7f752019 nmdc:dobj-11-cjz3hs06 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ndx71908.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7ba228b6cdf846e56c29074dcde9a65 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfmgas-11-ndx71908.1/nmdc_wfmgas-11-ndx71908.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7ba228b6cdf846e56c29074dcde9a65 nmdc:dobj-11-q8thaq41 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nmdc:omprc-11-ckb6rr81 +INFO:root:New activity id created for nmdc:omprc-11-ckb6rr81 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-zpsz6p36.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrbt-11-zpsz6p36.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f22232028891ff12bb1a27f361304dfe +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrbt-11-zpsz6p36.1/nmdc_wfrbt-11-zpsz6p36.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f22232028891ff12bb1a27f361304dfe nmdc:dobj-11-k04bxs55 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zpsz6p36.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ca16f5a35d3af840e2c1973dc653d7c +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrbt-11-zpsz6p36.1/nmdc_wfrbt-11-zpsz6p36.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ca16f5a35d3af840e2c1973dc653d7c nmdc:dobj-11-c3k97079 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zpsz6p36.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f59a4fb2a4ba1efb655ed5885867f5d2 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrbt-11-zpsz6p36.1/nmdc_wfrbt-11-zpsz6p36.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f59a4fb2a4ba1efb655ed5885867f5d2 nmdc:dobj-11-6592n518 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ckb6rr81 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nmdc_wfrbt-11-zpsz6p36.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86f2be96352f2d8e2d54c5532caee177 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrbt-11-zpsz6p36.1/nmdc_wfrbt-11-zpsz6p36.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86f2be96352f2d8e2d54c5532caee177 nmdc:dobj-11-zhyjdc17 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zpsz6p36.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74c3f426f7b7ed64fc244d86208829ca +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrbt-11-zpsz6p36.1/nmdc_wfrbt-11-zpsz6p36.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74c3f426f7b7ed64fc244d86208829ca nmdc:dobj-11-jyfcpv25 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zpsz6p36.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3577497fcf11d85bb7dcccb959c0720 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ckb6rr81/nmdc:wfrbt-11-zpsz6p36.1/nmdc_wfrbt-11-zpsz6p36.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3577497fcf11d85bb7dcccb959c0720 nmdc:dobj-11-g098rm27 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ckb6rr81 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zpsz6p36.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1f7976f270dba12a6b312967202f3168 nmdc:wfrbt-11-zpsz6p36.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ckb6rr81 +INFO:root:omics_processing_id: nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0e59b441fa5c71b4e32b8ede7bc814a nmdc:dobj-11-n6rekr61 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8mevj163 +INFO:root:New activity id created for nmdc:omprc-11-8mevj163 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rwta1j51.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrqc-11-rwta1j51.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9056f6b21f5bb61cf91770746e0952c4 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrqc-11-rwta1j51.1/nmdc_wfrqc-11-rwta1j51.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9056f6b21f5bb61cf91770746e0952c4 nmdc:dobj-11-7fjj0w73 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rwta1j51.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2bd673d358cb60e44d4f301fd8623db5 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrqc-11-rwta1j51.1/nmdc_wfrqc-11-rwta1j51.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2bd673d358cb60e44d4f301fd8623db5 nmdc:dobj-11-a8nexb40 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rwta1j51.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:989ef5735e8fe73e890fdd709bacb35c nmdc:wfrqc-11-rwta1j51.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-8mevj163 +INFO:root:New activity id created for nmdc:omprc-11-8mevj163 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wfggee83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfmgas-11-wfggee83.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f519d8bc805bf5cfde2f83632768a7ac +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfmgas-11-wfggee83.1/nmdc_wfmgas-11-wfggee83.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f519d8bc805bf5cfde2f83632768a7ac nmdc:dobj-11-5021pz03 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wfggee83.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:339b4886c9b1bfef9e1475797c8bbe9e +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfmgas-11-wfggee83.1/nmdc_wfmgas-11-wfggee83.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:339b4886c9b1bfef9e1475797c8bbe9e nmdc:dobj-11-8tbajd86 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wfggee83.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c92903508f7a272b242895091c0310f +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfmgas-11-wfggee83.1/nmdc_wfmgas-11-wfggee83.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c92903508f7a272b242895091c0310f nmdc:dobj-11-r7rpxj54 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wfggee83.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f8742da78f7d53b5a0d692a9404f01e +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfmgas-11-wfggee83.1/nmdc_wfmgas-11-wfggee83.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f8742da78f7d53b5a0d692a9404f01e nmdc:dobj-11-y66f4590 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wfggee83.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1fca5095497bb79003f36ca4e5968c24 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfmgas-11-wfggee83.1/nmdc_wfmgas-11-wfggee83.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1fca5095497bb79003f36ca4e5968c24 nmdc:dobj-11-vvvwzj68 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:05e80e1771c73e59248c52fb55fd1f44 nmdc:dobj-11-3xvav914 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcf63046d719c8ded335370d86aaf996 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrbt-11-10k06w82.1/nmdc_wfrbt-11-10k06w82.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcf63046d719c8ded335370d86aaf996 nmdc:dobj-11-gzj2pw28 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb43f190f3e30bfa958353fa5e3a02fd +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrbt-11-10k06w82.1/nmdc_wfrbt-11-10k06w82.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb43f190f3e30bfa958353fa5e3a02fd nmdc:dobj-11-2tm05145 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b06cd0a503698f264b0823a12f473b2a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrbt-11-10k06w82.1/nmdc_wfrbt-11-10k06w82.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b06cd0a503698f264b0823a12f473b2a nmdc:dobj-11-yvvdbr53 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd6f61aabce20c3465348de82748ff9e +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrbt-11-10k06w82.1/nmdc_wfrbt-11-10k06w82.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd6f61aabce20c3465348de82748ff9e nmdc:dobj-11-b6vw8k33 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a06e5e91986f7bdf7d6c6e450a0644d1 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrbt-11-10k06w82.1/nmdc_wfrbt-11-10k06w82.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a06e5e91986f7bdf7d6c6e450a0644d1 nmdc:dobj-11-9caccx09 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d2c8147114efc35d7b241e6d0b188d7 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrbt-11-10k06w82.1/nmdc_wfrbt-11-10k06w82.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d2c8147114efc35d7b241e6d0b188d7 nmdc:dobj-11-dy2h5002 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2e36bfcd8ff26b4c5b716a6bda5632f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrbt-11-10k06w82.1/nmdc_wfrbt-11-10k06w82.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2e36bfcd8ff26b4c5b716a6bda5632f nmdc:dobj-11-yv8gsj28 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8606d6f4da6fc67d1e821ff785e843ac +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8mevj163/nmdc:wfrbt-11-10k06w82.1/nmdc_wfrbt-11-10k06w82.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8606d6f4da6fc67d1e821ff785e843ac nmdc:dobj-11-mj57wn62 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-8mevj163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10k06w82.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:989ef5735e8fe73e890fdd709bacb35c nmdc:wfrbt-11-10k06w82.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8mevj163 +INFO:root:omics_processing_id: nmdc:omprc-11-pzcn7805 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b02af5b182fd42623b3a0b0c01664669 nmdc:dobj-11-mw6wm566 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-pzcn7805 +INFO:root:New activity id created for nmdc:omprc-11-pzcn7805 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-tmbn8x14.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pzcn7805/nmdc:wfrqc-11-tmbn8x14.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c13715a8dcaf76edc2a6719bb80bd480 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pzcn7805/nmdc:wfrqc-11-tmbn8x14.1/nmdc_wfrqc-11-tmbn8x14.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c13715a8dcaf76edc2a6719bb80bd480 nmdc:dobj-11-b2jak469 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-pzcn7805 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tmbn8x14.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:57d9ec28bc07ffd08eb45eb2bfd7d367 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pzcn7805/nmdc:wfrqc-11-tmbn8x14.1/nmdc_wfrqc-11-tmbn8x14.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:57d9ec28bc07ffd08eb45eb2bfd7d367 nmdc:dobj-11-thchty09 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pzcn7805 +INFO:nmdc_automation.re_iding.base:new_filename: 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nmdc:cd5d85f6e6f606d6ec8ef3e9d43883de nmdc:dobj-11-ymy1nv55 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pzcn7805 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83drwe93.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89a1aaefde0a6f5357d5d666d9aa70a0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pzcn7805/nmdc:wfmgas-11-83drwe93.1/nmdc_wfmgas-11-83drwe93.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89a1aaefde0a6f5357d5d666d9aa70a0 nmdc:dobj-11-66a7rt57 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-pzcn7805 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83drwe93.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b318b6c05ae58f99f0bc48efd308e54 +INFO:root:New file path computed for Assembly Coverage BAM: 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report for nmdc:omprc-11-pzcn7805 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whsqmz33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:949ef9cc37b29828665056e20ff01aaf +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pzcn7805/nmdc:wfrbt-11-whsqmz33.1/nmdc_wfrbt-11-whsqmz33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:949ef9cc37b29828665056e20ff01aaf nmdc:dobj-11-xwmwtc85 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-pzcn7805 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whsqmz33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78fe1bd626419afcfe7a49f166be311e +INFO:root:New file path computed for Centrifuge Taxonomic Classification: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ag3zfm09/nmdc:wfmgas-11-g8necp26.1/nmdc_wfmgas-11-g8necp26.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:643703fb946767d9fcd8985a1bbedcd6 nmdc:dobj-11-zka7ak77 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ag3zfm09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g8necp26.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad166ac7916b77e73b4f1e4b12237b5b +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ag3zfm09/nmdc:wfmgas-11-g8necp26.1/nmdc_wfmgas-11-g8necp26.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad166ac7916b77e73b4f1e4b12237b5b nmdc:dobj-11-4rzzhb12 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ag3zfm09 +INFO:nmdc_automation.re_iding.base:new_filename: 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ag3zfm09/nmdc:wfrbt-11-r2p6s641.1/nmdc_wfrbt-11-r2p6s641.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19a59734af16e66d245bebccc6f4ce53 nmdc:dobj-11-m1wdsp50 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ag3zfm09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r2p6s641.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21ff0887ed8e09c52cbc49a7a998f262 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ag3zfm09/nmdc:wfrbt-11-r2p6s641.1/nmdc_wfrbt-11-r2p6s641.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21ff0887ed8e09c52cbc49a7a998f262 nmdc:dobj-11-kgkmx649 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ag3zfm09 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nmdc_wfrbt-11-r2p6s641.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f6cc33b1a98a52630f4fd54f85ac49ef +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ag3zfm09/nmdc:wfrbt-11-r2p6s641.1/nmdc_wfrbt-11-r2p6s641.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f6cc33b1a98a52630f4fd54f85ac49ef nmdc:dobj-11-esmv1b92 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ag3zfm09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r2p6s641.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:870df67025a18dcfc0e1d8c4925e4c61 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ag3zfm09/nmdc:wfrbt-11-r2p6s641.1/nmdc_wfrbt-11-r2p6s641.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:870df67025a18dcfc0e1d8c4925e4c61 nmdc:dobj-11-91xtsv51 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ag3zfm09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r2p6s641.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b74b8090b78e3660a6bae90671b43f2b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ag3zfm09/nmdc:wfrbt-11-r2p6s641.1/nmdc_wfrbt-11-r2p6s641.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b74b8090b78e3660a6bae90671b43f2b nmdc:dobj-11-1bvjz419 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ag3zfm09 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-r2p6s641.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:042554b6db1f3e2760502ad890582993 nmdc:wfrbt-11-r2p6s641.1 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nmdc:dobj-11-s981hw95 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-yt6w0642 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h4qzvd22.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bbd26926763e3aadacb22ed7c41217c4 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yt6w0642/nmdc:wfrqc-11-h4qzvd22.1/nmdc_wfrqc-11-h4qzvd22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bbd26926763e3aadacb22ed7c41217c4 nmdc:dobj-11-t567vq88 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-yt6w0642 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h4qzvd22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e0e1a769a350e3468d43c3e9e91ee2d1 nmdc:wfrqc-11-h4qzvd22.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-yt6w0642 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nmdc_wfmgas-11-31ek8d73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e740d1cc9a676d76d5463e1a2a66925b +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yt6w0642/nmdc:wfmgas-11-31ek8d73.1/nmdc_wfmgas-11-31ek8d73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e740d1cc9a676d76d5463e1a2a66925b nmdc:dobj-11-2se39w49 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-yt6w0642 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-31ek8d73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eda7df87a7974565e6678a12a3352961 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yt6w0642/nmdc:wfmgas-11-31ek8d73.1/nmdc_wfmgas-11-31ek8d73.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eda7df87a7974565e6678a12a3352961 nmdc:dobj-11-dw343w75 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nmdc:omprc-11-yt6w0642 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5nn17n84.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e0e1a769a350e3468d43c3e9e91ee2d1 nmdc:wfrbt-11-5nn17n84.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-yt6w0642 +INFO:root:omics_processing_id: nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c4393100f69aa36881085404e15c085 nmdc:dobj-11-3h3z1m32 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-qe4cww43 +INFO:root:New activity id created for nmdc:omprc-11-qe4cww43 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-b9css117.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrqc-11-b9css117.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1d6f7e515b139651d01fa4fd9909b044 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrqc-11-b9css117.1/nmdc_wfrqc-11-b9css117.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d6f7e515b139651d01fa4fd9909b044 nmdc:dobj-11-tyap0e43 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b9css117.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c05b5a0ac6650157a634774a39fe6bb +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrqc-11-b9css117.1/nmdc_wfrqc-11-b9css117.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c05b5a0ac6650157a634774a39fe6bb nmdc:dobj-11-yzk1de70 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b9css117.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:097b298c3497992f826e6ca665d5b771 nmdc:wfrqc-11-b9css117.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-qe4cww43 +INFO:root:New activity id created for nmdc:omprc-11-qe4cww43 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vf52vw73.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfmgas-11-vf52vw73.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa6c4eec0c869503438a8a1050465fd0 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfmgas-11-vf52vw73.1/nmdc_wfmgas-11-vf52vw73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa6c4eec0c869503438a8a1050465fd0 nmdc:dobj-11-zg4zpr87 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vf52vw73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31f61260dcd6f128e14973668d3a9697 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfmgas-11-vf52vw73.1/nmdc_wfmgas-11-vf52vw73.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31f61260dcd6f128e14973668d3a9697 nmdc:dobj-11-cs06nh76 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vf52vw73.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cfca243318bb93fcc2cbb2265472f2ec +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfmgas-11-vf52vw73.1/nmdc_wfmgas-11-vf52vw73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfca243318bb93fcc2cbb2265472f2ec nmdc:dobj-11-f7kmjv16 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vf52vw73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9481efa84935d3021619722e0cae92ca +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfmgas-11-vf52vw73.1/nmdc_wfmgas-11-vf52vw73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9481efa84935d3021619722e0cae92ca nmdc:dobj-11-tnew4j23 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vf52vw73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c27af872eface177a54baa102799cfc3 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfmgas-11-vf52vw73.1/nmdc_wfmgas-11-vf52vw73.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c27af872eface177a54baa102799cfc3 nmdc:dobj-11-8e0g1795 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vf52vw73.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:097b298c3497992f826e6ca665d5b771 nmdc:wfmgas-11-vf52vw73.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-qe4cww43 +INFO:root:New activity id created for nmdc:omprc-11-qe4cww43 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-txbnaw51.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrbt-11-txbnaw51.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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report for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-txbnaw51.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ac2b761f0f963284feabd25bbf30b56 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrbt-11-txbnaw51.1/nmdc_wfrbt-11-txbnaw51.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ac2b761f0f963284feabd25bbf30b56 nmdc:dobj-11-6agkpt12 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-txbnaw51.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0fe1a61235660e51aaf91d8540735cc +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrbt-11-txbnaw51.1/nmdc_wfrbt-11-txbnaw51.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0fe1a61235660e51aaf91d8540735cc nmdc:dobj-11-s8j63e65 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-txbnaw51.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d77e86e9291639049fc143db3d24e2c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrbt-11-txbnaw51.1/nmdc_wfrbt-11-txbnaw51.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d77e86e9291639049fc143db3d24e2c nmdc:dobj-11-r8f5gn51 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-txbnaw51.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7686f3eae4bc280c427c2dc631ee0df +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrbt-11-txbnaw51.1/nmdc_wfrbt-11-txbnaw51.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7686f3eae4bc280c427c2dc631ee0df nmdc:dobj-11-rkc5r344 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-txbnaw51.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7f0cbadd2c285e872341deca161b0b52 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrbt-11-txbnaw51.1/nmdc_wfrbt-11-txbnaw51.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f0cbadd2c285e872341deca161b0b52 nmdc:dobj-11-v58pjw76 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-txbnaw51.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48ab5fbb952f47e67bab47dfc02ec8b8 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrbt-11-txbnaw51.1/nmdc_wfrbt-11-txbnaw51.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48ab5fbb952f47e67bab47dfc02ec8b8 nmdc:dobj-11-4emh0q67 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-txbnaw51.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2420df855fdd6dce3a5b8c39012e4c09 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qe4cww43/nmdc:wfrbt-11-txbnaw51.1/nmdc_wfrbt-11-txbnaw51.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2420df855fdd6dce3a5b8c39012e4c09 nmdc:dobj-11-26knkb37 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-qe4cww43 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-txbnaw51.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:097b298c3497992f826e6ca665d5b771 nmdc:wfrbt-11-txbnaw51.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-qe4cww43 +INFO:root:omics_processing_id: nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d49fe5d67dcc8ab618ac5c11848b0d0 nmdc:dobj-11-x0g0q286 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-beeje094 +INFO:root:New activity id created for nmdc:omprc-11-beeje094 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-f5p66126.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrqc-11-f5p66126.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbc8153b6f00752881e53c5207fde5ee +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrqc-11-f5p66126.1/nmdc_wfrqc-11-f5p66126.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbc8153b6f00752881e53c5207fde5ee nmdc:dobj-11-xz7m6s81 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-f5p66126.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:81f8cee97e40042a0c5eec9f4d302627 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrqc-11-f5p66126.1/nmdc_wfrqc-11-f5p66126.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81f8cee97e40042a0c5eec9f4d302627 nmdc:dobj-11-x5jjzx25 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-f5p66126.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2f3cdb6322a3b242a13ea6200c8ab43b nmdc:wfrqc-11-f5p66126.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-beeje094 +INFO:root:New activity id created for nmdc:omprc-11-beeje094 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-01wp6w84.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfmgas-11-01wp6w84.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a799b0a3e87beb42a5df90451f5852b5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfmgas-11-01wp6w84.1/nmdc_wfmgas-11-01wp6w84.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a799b0a3e87beb42a5df90451f5852b5 nmdc:dobj-11-0djk3r17 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-01wp6w84.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e746b135c43cff69f88e5cf35028cf2 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfmgas-11-01wp6w84.1/nmdc_wfmgas-11-01wp6w84.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e746b135c43cff69f88e5cf35028cf2 nmdc:dobj-11-vww78q73 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-01wp6w84.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:06e7d4f77e52fd60d61998142ebb858f +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfmgas-11-01wp6w84.1/nmdc_wfmgas-11-01wp6w84.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06e7d4f77e52fd60d61998142ebb858f nmdc:dobj-11-bzjnwz21 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-01wp6w84.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42a176270a328ab95d4de998f8e6ea66 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfmgas-11-01wp6w84.1/nmdc_wfmgas-11-01wp6w84.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42a176270a328ab95d4de998f8e6ea66 nmdc:dobj-11-194a5a65 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nmdc:omprc-11-beeje094 +INFO:root:New activity id created for nmdc:omprc-11-beeje094 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-cgbd7d84.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrbt-11-cgbd7d84.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3a3a5325c3dfe6b06eabcf50414fba7 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrbt-11-cgbd7d84.1/nmdc_wfrbt-11-cgbd7d84.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b3a3a5325c3dfe6b06eabcf50414fba7 nmdc:dobj-11-xqgjbs70 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cgbd7d84.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1930871c15c9957862d9b58a4b31b6d8 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrbt-11-cgbd7d84.1/nmdc_wfrbt-11-cgbd7d84.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1930871c15c9957862d9b58a4b31b6d8 nmdc:dobj-11-94vwa698 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cgbd7d84.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fccfe0559ed5879d2e9fce7c934e90b6 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrbt-11-cgbd7d84.1/nmdc_wfrbt-11-cgbd7d84.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fccfe0559ed5879d2e9fce7c934e90b6 nmdc:dobj-11-1p6fne06 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-beeje094 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nmdc_wfrbt-11-cgbd7d84.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:523668abb8904044657acacce8686746 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrbt-11-cgbd7d84.1/nmdc_wfrbt-11-cgbd7d84.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:523668abb8904044657acacce8686746 nmdc:dobj-11-1wj3pr36 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cgbd7d84.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7a75a07ae529137035e9c73a40a5dfe +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrbt-11-cgbd7d84.1/nmdc_wfrbt-11-cgbd7d84.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7a75a07ae529137035e9c73a40a5dfe nmdc:dobj-11-cswha525 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cgbd7d84.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09a8aad77e6e68f3cffe55d50c86dc99 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-beeje094/nmdc:wfrbt-11-cgbd7d84.1/nmdc_wfrbt-11-cgbd7d84.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09a8aad77e6e68f3cffe55d50c86dc99 nmdc:dobj-11-bcqkb451 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-beeje094 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cgbd7d84.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2f3cdb6322a3b242a13ea6200c8ab43b nmdc:wfrbt-11-cgbd7d84.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfmgas-11-e8x84312.1/nmdc_wfmgas-11-e8x84312.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dad6da8db6525463245a45f8030a1b1b nmdc:dobj-11-14arvq37 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e8x84312.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6ae95518a16450b4180cb9446444e78a +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfmgas-11-e8x84312.1/nmdc_wfmgas-11-e8x84312.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ae95518a16450b4180cb9446444e78a nmdc:dobj-11-xawnjx73 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfrbt-11-g26c1q22.1/nmdc_wfrbt-11-g26c1q22.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13a20daeb0b02c3b6a6ae0bbf3b3c49a nmdc:dobj-11-g5412p94 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g26c1q22.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f2c34fbaa9a7e7c877e1bad58e9f3848 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfrbt-11-g26c1q22.1/nmdc_wfrbt-11-g26c1q22.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2c34fbaa9a7e7c877e1bad58e9f3848 nmdc:dobj-11-0ntex728 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g26c1q22.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:208310496e2982ed50f74655aa72ece9 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfrbt-11-g26c1q22.1/nmdc_wfrbt-11-g26c1q22.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:208310496e2982ed50f74655aa72ece9 nmdc:dobj-11-5qhby238 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g26c1q22.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c64ebef0c770f703ba062de01ce1c130 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfrbt-11-g26c1q22.1/nmdc_wfrbt-11-g26c1q22.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c64ebef0c770f703ba062de01ce1c130 nmdc:dobj-11-7t2kn603 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g26c1q22.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a01ed9ca03981fe01c83b2771658e65 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfrbt-11-g26c1q22.1/nmdc_wfrbt-11-g26c1q22.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a01ed9ca03981fe01c83b2771658e65 nmdc:dobj-11-6tm89y48 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g26c1q22.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9acfde66b4bff0bf89bd4626c6a68746 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfrbt-11-g26c1q22.1/nmdc_wfrbt-11-g26c1q22.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9acfde66b4bff0bf89bd4626c6a68746 nmdc:dobj-11-q7qh2n89 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g26c1q22.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:256a6fab692e14102d0dbf4dc752012f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8s9kbz29/nmdc:wfrbt-11-g26c1q22.1/nmdc_wfrbt-11-g26c1q22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:256a6fab692e14102d0dbf4dc752012f nmdc:dobj-11-et9kjn84 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-8s9kbz29 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g26c1q22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7768f9064d8fc58a9e45c332c127dbb9 nmdc:wfrbt-11-g26c1q22.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8s9kbz29 +INFO:root:omics_processing_id: nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f67fa9ab4d22a53b2c6020c2ba33403e nmdc:dobj-11-ks7m0p35 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-fax98124 +INFO:root:New activity id created for nmdc:omprc-11-fax98124 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-p2tvae05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfrqc-11-p2tvae05.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22e1cce972030a9e3697b5c33471105b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfrqc-11-p2tvae05.1/nmdc_wfrqc-11-p2tvae05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22e1cce972030a9e3697b5c33471105b nmdc:dobj-11-q5bjs759 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p2tvae05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3a40ee1d9e0677fd568436a7365e0ff +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfrqc-11-p2tvae05.1/nmdc_wfrqc-11-p2tvae05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3a40ee1d9e0677fd568436a7365e0ff nmdc:dobj-11-dhadk748 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p2tvae05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:5087370f5f34ee02f2b2abe523109519 nmdc:wfrqc-11-p2tvae05.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-fax98124 +INFO:root:New activity id created for nmdc:omprc-11-fax98124 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-f0256462.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfmgas-11-f0256462.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f2af1bb2f7f352e36094c7c8765f6a3 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfmgas-11-f0256462.1/nmdc_wfmgas-11-f0256462.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f2af1bb2f7f352e36094c7c8765f6a3 nmdc:dobj-11-49brew88 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-f0256462.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebbdabb25c14d2986f663bf20c7fe1d4 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfmgas-11-f0256462.1/nmdc_wfmgas-11-f0256462.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebbdabb25c14d2986f663bf20c7fe1d4 nmdc:dobj-11-8pz7mv35 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-f0256462.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0946bb677b04bdd35629e214c29b5c77 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfmgas-11-f0256462.1/nmdc_wfmgas-11-f0256462.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0946bb677b04bdd35629e214c29b5c77 nmdc:dobj-11-rr730w06 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-f0256462.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80f9f124f9f32513cc824afb20612fa9 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfmgas-11-f0256462.1/nmdc_wfmgas-11-f0256462.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80f9f124f9f32513cc824afb20612fa9 nmdc:dobj-11-m5h27a20 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-f0256462.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71b84ec83fcba28ccff7c781a9fa7e49 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfmgas-11-f0256462.1/nmdc_wfmgas-11-f0256462.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71b84ec83fcba28ccff7c781a9fa7e49 nmdc:dobj-11-gj355d61 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-f0256462.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:5087370f5f34ee02f2b2abe523109519 nmdc:wfmgas-11-f0256462.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-fax98124 +INFO:root:New activity id created for nmdc:omprc-11-fax98124 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-n2ftpy16.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfrbt-11-n2ftpy16.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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report for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-n2ftpy16.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b2c60d6b88c0da58405d308f0a5f68dc +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfrbt-11-n2ftpy16.1/nmdc_wfrbt-11-n2ftpy16.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2c60d6b88c0da58405d308f0a5f68dc nmdc:dobj-11-93vr0t15 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-n2ftpy16.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4630ec4403fe5999a10a5c40bb29a2d3 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: 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+INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fax98124/nmdc:wfrbt-11-n2ftpy16.1/nmdc_wfrbt-11-n2ftpy16.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c55de70818037b961eebb4003ceed9ed nmdc:dobj-11-g2pkqq65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-fax98124 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-n2ftpy16.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5087370f5f34ee02f2b2abe523109519 nmdc:wfrbt-11-n2ftpy16.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-fax98124 +INFO:root:omics_processing_id: nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a9796745d172441fac7f339da2cca60 nmdc:dobj-11-afhws660 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-kdn7hr20 +INFO:root:New activity id created for nmdc:omprc-11-kdn7hr20 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-m8gj8g19.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrqc-11-m8gj8g19.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:789829c9d7f31b60f282ac29bca096c9 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrqc-11-m8gj8g19.1/nmdc_wfrqc-11-m8gj8g19.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:789829c9d7f31b60f282ac29bca096c9 nmdc:dobj-11-5wv1kp97 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-m8gj8g19.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0797c8d07a58ad691b6671e3bdda06c6 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrqc-11-m8gj8g19.1/nmdc_wfrqc-11-m8gj8g19.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0797c8d07a58ad691b6671e3bdda06c6 nmdc:dobj-11-w09v9364 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-m8gj8g19.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2a987a5493d236b90ffceab8ce866297 nmdc:wfrqc-11-m8gj8g19.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-kdn7hr20 +INFO:root:New activity id created for nmdc:omprc-11-kdn7hr20 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-dw7xvx45.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfmgas-11-dw7xvx45.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79ef62bf8b7a75e5fe77afbf83e39e8f +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfmgas-11-dw7xvx45.1/nmdc_wfmgas-11-dw7xvx45.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79ef62bf8b7a75e5fe77afbf83e39e8f nmdc:dobj-11-d6m0df49 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dw7xvx45.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ae970adc6c46511a5a3a13c8041a1a7 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfmgas-11-dw7xvx45.1/nmdc_wfmgas-11-dw7xvx45.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ae970adc6c46511a5a3a13c8041a1a7 nmdc:dobj-11-r7a5fx65 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dw7xvx45.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:38ecd74d4a04cbd1d955bcb4bc8fd1d2 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfmgas-11-dw7xvx45.1/nmdc_wfmgas-11-dw7xvx45.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ecd74d4a04cbd1d955bcb4bc8fd1d2 nmdc:dobj-11-6wky0e22 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dw7xvx45.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b834f6586bec8477280ad5307c3ae55 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfmgas-11-dw7xvx45.1/nmdc_wfmgas-11-dw7xvx45.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b834f6586bec8477280ad5307c3ae55 nmdc:dobj-11-e1z86742 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nmdc:omprc-11-kdn7hr20 +INFO:root:New activity id created for nmdc:omprc-11-kdn7hr20 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dmfkg377.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fcecb0a18ffb202b1938bae0110266e +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fcecb0a18ffb202b1938bae0110266e nmdc:dobj-11-3zqdyp16 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b95bfe627382ae6526f45f732fe853f9 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b95bfe627382ae6526f45f732fe853f9 nmdc:dobj-11-a1jk2170 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b90c16beb5b9ede9a4241c2d132b40e1 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b90c16beb5b9ede9a4241c2d132b40e1 nmdc:dobj-11-6vpcgz76 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15729d61dd0e52338db0d0421deab653 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15729d61dd0e52338db0d0421deab653 nmdc:dobj-11-t6ja8g40 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ddb9fe52a4da5962ae29fe6c3b647c6 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ddb9fe52a4da5962ae29fe6c3b647c6 nmdc:dobj-11-6cztn602 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1af4fd4ab15aae1aeac67f235cb7e0c3 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1af4fd4ab15aae1aeac67f235cb7e0c3 nmdc:dobj-11-xh2jzg51 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bc7e8b7a65cb4832e21192e8728dacf6 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bc7e8b7a65cb4832e21192e8728dacf6 nmdc:dobj-11-4yr4qy66 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fda07d1bcef146b99a0b9df7a48c7d01 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fda07d1bcef146b99a0b9df7a48c7d01 nmdc:dobj-11-faabkv62 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5b48033f6d4bdd9740f337e1ad825e8 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kdn7hr20/nmdc:wfrbt-11-dmfkg377.1/nmdc_wfrbt-11-dmfkg377.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5b48033f6d4bdd9740f337e1ad825e8 nmdc:dobj-11-6ge39n62 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-kdn7hr20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dmfkg377.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2a987a5493d236b90ffceab8ce866297 nmdc:wfrbt-11-dmfkg377.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-kdn7hr20 +INFO:root:omics_processing_id: nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d22999e7d15c9c17c04da2547841734 nmdc:dobj-11-thbm4798 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-4gx7pv13 +INFO:root:New activity id created for nmdc:omprc-11-4gx7pv13 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-wn4wr054.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrqc-11-wn4wr054.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a413597127e05795310166c59be05eb8 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrqc-11-wn4wr054.1/nmdc_wfrqc-11-wn4wr054.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a413597127e05795310166c59be05eb8 nmdc:dobj-11-gct4kd35 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wn4wr054.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a5a50e6361298fd8ffd6d2232d9f861 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrqc-11-wn4wr054.1/nmdc_wfrqc-11-wn4wr054.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a5a50e6361298fd8ffd6d2232d9f861 nmdc:dobj-11-m5v35p69 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wn4wr054.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:116c33b7515d3d498357df5732ed0d51 nmdc:wfrqc-11-wn4wr054.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-4gx7pv13 +INFO:root:New activity id created for nmdc:omprc-11-4gx7pv13 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-dwgaej40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfmgas-11-dwgaej40.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:304d51177b1da0a097554e758f09cad3 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfmgas-11-dwgaej40.1/nmdc_wfmgas-11-dwgaej40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:304d51177b1da0a097554e758f09cad3 nmdc:dobj-11-eabd0h88 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dwgaej40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f5d43c4a05e7f6019fb9417a0f1de7d +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfmgas-11-dwgaej40.1/nmdc_wfmgas-11-dwgaej40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f5d43c4a05e7f6019fb9417a0f1de7d nmdc:dobj-11-f5vdpr79 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dwgaej40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41b23c81cfe97465dd71ef701f3ec21e +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfmgas-11-dwgaej40.1/nmdc_wfmgas-11-dwgaej40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41b23c81cfe97465dd71ef701f3ec21e nmdc:dobj-11-7q5nh297 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dwgaej40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ab8a2e66b85181d095f6138c542548c +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfmgas-11-dwgaej40.1/nmdc_wfmgas-11-dwgaej40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ab8a2e66b85181d095f6138c542548c nmdc:dobj-11-4xza3821 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dwgaej40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6367fae5697344053361bc6304b25240 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfmgas-11-dwgaej40.1/nmdc_wfmgas-11-dwgaej40.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6367fae5697344053361bc6304b25240 nmdc:dobj-11-9bzat325 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrbt-11-y0300y59.1/nmdc_wfrbt-11-y0300y59.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:683b367f802143b6f1eedae25a52c9f0 nmdc:dobj-11-qvwfxd83 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0300y59.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:607143968612689e1c244960eaa7f0f8 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrbt-11-y0300y59.1/nmdc_wfrbt-11-y0300y59.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:607143968612689e1c244960eaa7f0f8 nmdc:dobj-11-ea016g89 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0300y59.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:316f0b3578bcc1c1ffd77f8af143fe85 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrbt-11-y0300y59.1/nmdc_wfrbt-11-y0300y59.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:316f0b3578bcc1c1ffd77f8af143fe85 nmdc:dobj-11-62xvvy40 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0300y59.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39554ac712c82a12159d43e32c3884e3 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrbt-11-y0300y59.1/nmdc_wfrbt-11-y0300y59.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39554ac712c82a12159d43e32c3884e3 nmdc:dobj-11-83pv7t36 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0300y59.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:55f55008ab7e4e8ef1450d0faebe00af +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrbt-11-y0300y59.1/nmdc_wfrbt-11-y0300y59.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:55f55008ab7e4e8ef1450d0faebe00af nmdc:dobj-11-7qayp181 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0300y59.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2150c1998f3f1c7ef9f9084ceb2ab1c7 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrbt-11-y0300y59.1/nmdc_wfrbt-11-y0300y59.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2150c1998f3f1c7ef9f9084ceb2ab1c7 nmdc:dobj-11-d3vyhp66 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0300y59.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d095fa658e8f1fe3e8987536119339a5 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4gx7pv13/nmdc:wfrbt-11-y0300y59.1/nmdc_wfrbt-11-y0300y59.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d095fa658e8f1fe3e8987536119339a5 nmdc:dobj-11-z3gdjr98 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-4gx7pv13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y0300y59.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:116c33b7515d3d498357df5732ed0d51 nmdc:wfrbt-11-y0300y59.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-4gx7pv13 +INFO:root:omics_processing_id: nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a8c29ae8922883bd39422aeb8face29 nmdc:dobj-11-ye1npj41 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-nsvbdn79 +INFO:root:New activity id created for nmdc:omprc-11-nsvbdn79 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0yjes906.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrqc-11-0yjes906.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c12d03741fbfef37c974700413c7c18a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrqc-11-0yjes906.1/nmdc_wfrqc-11-0yjes906.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c12d03741fbfef37c974700413c7c18a nmdc:dobj-11-6h9t2v97 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0yjes906.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e8c99895a38739e4ef1e23c808fa516a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrqc-11-0yjes906.1/nmdc_wfrqc-11-0yjes906.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8c99895a38739e4ef1e23c808fa516a nmdc:dobj-11-dn0r4376 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0yjes906.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8185231e1930dba5fd59a799c423b301 nmdc:wfrqc-11-0yjes906.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-nsvbdn79 +INFO:root:New activity id created for nmdc:omprc-11-nsvbdn79 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vyda1646.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfmgas-11-vyda1646.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:254213d13ac1da75507644362def0eca +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfmgas-11-vyda1646.1/nmdc_wfmgas-11-vyda1646.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:254213d13ac1da75507644362def0eca nmdc:dobj-11-4nft0t47 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-nsvbdn79 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nmdc:770850ef46f2628e658e4add06e7aed3 nmdc:dobj-11-c80m6m30 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vyda1646.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e91a9028510f8cc4ec4bbcf507ff0cc3 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfmgas-11-vyda1646.1/nmdc_wfmgas-11-vyda1646.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e91a9028510f8cc4ec4bbcf507ff0cc3 nmdc:dobj-11-xec7m718 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vyda1646.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1eb8e9d73fdef28298399548182c0eeb +INFO:root:New file path computed for Assembly Coverage BAM: 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nmdc:cf4e96da52f5de157d0b71ad9f36fee8 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf4e96da52f5de157d0b71ad9f36fee8 nmdc:dobj-11-k2hwae18 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b54561e88013c81bb787973c28913a2 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b54561e88013c81bb787973c28913a2 nmdc:dobj-11-mnx5ze03 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4043bf7c6a288affa9920b94d1f108ca +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4043bf7c6a288affa9920b94d1f108ca nmdc:dobj-11-099hmz20 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:219a3468f95c7ab158b2a2429503862a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:219a3468f95c7ab158b2a2429503862a nmdc:dobj-11-hr4d5308 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa19aca33096a1275a112d9adcb675b1 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa19aca33096a1275a112d9adcb675b1 nmdc:dobj-11-c24pv596 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f1c1f28ca827ff8361f2db3097792bb +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f1c1f28ca827ff8361f2db3097792bb nmdc:dobj-11-9nr93v19 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a97cb1c777990f682d49c1989a0c2fe8 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a97cb1c777990f682d49c1989a0c2fe8 nmdc:dobj-11-nshnxm72 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b909cb6dd45428d7452027befa687200 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b909cb6dd45428d7452027befa687200 nmdc:dobj-11-z2tahg98 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d732a3c9c792361c9bdfbf2fc82a254 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nsvbdn79/nmdc:wfrbt-11-wzpfb029.1/nmdc_wfrbt-11-wzpfb029.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d732a3c9c792361c9bdfbf2fc82a254 nmdc:dobj-11-0618s228 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-nsvbdn79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wzpfb029.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8185231e1930dba5fd59a799c423b301 nmdc:wfrbt-11-wzpfb029.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-nsvbdn79 +INFO:root:omics_processing_id: nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c375644753f4e7c9adb35f5598105fe3 nmdc:dobj-11-atg47h56 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-t6bx8a94 +INFO:root:New activity id created for nmdc:omprc-11-t6bx8a94 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-439pfz16.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrqc-11-439pfz16.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7236963d17031b5851b0181e953ccaea +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrqc-11-439pfz16.1/nmdc_wfrqc-11-439pfz16.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7236963d17031b5851b0181e953ccaea nmdc:dobj-11-rmpsb038 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-439pfz16.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:278acae2e73db6c9907f3f5a6b156441 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrqc-11-439pfz16.1/nmdc_wfrqc-11-439pfz16.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:278acae2e73db6c9907f3f5a6b156441 nmdc:dobj-11-cfn7eb75 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-439pfz16.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:612aa86138825967b8bdf14304174cb8 nmdc:wfrqc-11-439pfz16.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-t6bx8a94 +INFO:root:New activity id created for nmdc:omprc-11-t6bx8a94 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-n7t7vp38.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfmgas-11-n7t7vp38.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f820398fe2b0e83d59737d6bc5887ba +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfmgas-11-n7t7vp38.1/nmdc_wfmgas-11-n7t7vp38.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f820398fe2b0e83d59737d6bc5887ba nmdc:dobj-11-8nb52a09 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n7t7vp38.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f97beba7accb48163b611fbd539d8cce +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfmgas-11-n7t7vp38.1/nmdc_wfmgas-11-n7t7vp38.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f97beba7accb48163b611fbd539d8cce nmdc:dobj-11-gyqr1p47 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n7t7vp38.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0722f856027813d579298cb7df73441e +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfmgas-11-n7t7vp38.1/nmdc_wfmgas-11-n7t7vp38.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0722f856027813d579298cb7df73441e nmdc:dobj-11-ma786e54 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n7t7vp38.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b13549a47cd51c0d95bd6e79611ddc9 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfmgas-11-n7t7vp38.1/nmdc_wfmgas-11-n7t7vp38.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b13549a47cd51c0d95bd6e79611ddc9 nmdc:dobj-11-qmdssz49 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nmdc:omprc-11-t6bx8a94 +INFO:root:New activity id created for nmdc:omprc-11-t6bx8a94 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vsq9cg43.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b252f44346b1572bb41c233c8a3c2392 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b252f44346b1572bb41c233c8a3c2392 nmdc:dobj-11-65287r52 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcd88c9242171b9f687ad09b83ceb056 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcd88c9242171b9f687ad09b83ceb056 nmdc:dobj-11-8fazv174 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e1f5aaf1ea4ce813e0348ef5c60b7a54 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e1f5aaf1ea4ce813e0348ef5c60b7a54 nmdc:dobj-11-bwra4c80 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59c702c73c5ff1fa2b773d85be5d1f0e +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59c702c73c5ff1fa2b773d85be5d1f0e nmdc:dobj-11-8kbxjw96 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:777eb30f166907f50565205216f88f18 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:777eb30f166907f50565205216f88f18 nmdc:dobj-11-akxmbq24 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8c388f1c914d6050bc7da5798ed5afe +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8c388f1c914d6050bc7da5798ed5afe nmdc:dobj-11-0k6zd503 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3c526e986ff37d15121b32d3f36a860b +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c526e986ff37d15121b32d3f36a860b nmdc:dobj-11-m32zdg65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:860aa0703b7f1c13549d3a77bd9474d7 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:860aa0703b7f1c13549d3a77bd9474d7 nmdc:dobj-11-e8es3e03 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ecdd5bd4344acc6899dfd83133618bcb +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6bx8a94/nmdc:wfrbt-11-vsq9cg43.1/nmdc_wfrbt-11-vsq9cg43.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ecdd5bd4344acc6899dfd83133618bcb nmdc:dobj-11-4zzxz451 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t6bx8a94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vsq9cg43.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:612aa86138825967b8bdf14304174cb8 nmdc:wfrbt-11-vsq9cg43.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-t6bx8a94 +INFO:root:omics_processing_id: nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e6d6c02aeb54c89babc6f0a07e00ae2 nmdc:dobj-11-ahh5xa56 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-qpt8n163 +INFO:root:New activity id created for nmdc:omprc-11-qpt8n163 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-j5b4rs11.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrqc-11-j5b4rs11.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed3569e5fff7505d26ce00a3e99d18e0 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrqc-11-j5b4rs11.1/nmdc_wfrqc-11-j5b4rs11.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed3569e5fff7505d26ce00a3e99d18e0 nmdc:dobj-11-y6z8gh28 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j5b4rs11.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:356b089ee96251a5d6a66ff13dd6ed7e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrqc-11-j5b4rs11.1/nmdc_wfrqc-11-j5b4rs11.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:356b089ee96251a5d6a66ff13dd6ed7e nmdc:dobj-11-yw1x9c50 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j5b4rs11.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e3b72aff00532673d929233b3fd7f2b4 nmdc:wfrqc-11-j5b4rs11.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-qpt8n163 +INFO:root:New activity id created for nmdc:omprc-11-qpt8n163 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5x134t70.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfmgas-11-5x134t70.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0552ecda40c02ef39e7a51e912c119a4 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfmgas-11-5x134t70.1/nmdc_wfmgas-11-5x134t70.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0552ecda40c02ef39e7a51e912c119a4 nmdc:dobj-11-a9kzph45 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5x134t70.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae1d4390ac3c6e52b72f34c3f8a9ab1f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfmgas-11-5x134t70.1/nmdc_wfmgas-11-5x134t70.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae1d4390ac3c6e52b72f34c3f8a9ab1f nmdc:dobj-11-25eq9m06 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5x134t70.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a507c52e9ddc78d3baef5513044f5e20 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfmgas-11-5x134t70.1/nmdc_wfmgas-11-5x134t70.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a507c52e9ddc78d3baef5513044f5e20 nmdc:dobj-11-7adcnm37 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5x134t70.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5ebc26b6fe65b386aa26ebdd7c8a2fd +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfmgas-11-5x134t70.1/nmdc_wfmgas-11-5x134t70.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5ebc26b6fe65b386aa26ebdd7c8a2fd nmdc:dobj-11-27pqyf50 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5x134t70.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:af4a88c72dabcc994f2f12a343a4ea86 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfmgas-11-5x134t70.1/nmdc_wfmgas-11-5x134t70.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:af4a88c72dabcc994f2f12a343a4ea86 nmdc:dobj-11-h21c0k60 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fee9878b7c3371f3cd61296866c7a7d8 nmdc:dobj-11-nvz80b83 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bd052240cc3999a9f522915d0e7900b +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrbt-11-bqmaq106.1/nmdc_wfrbt-11-bqmaq106.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bd052240cc3999a9f522915d0e7900b nmdc:dobj-11-vpcepa79 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa6694f05f4bd4723381613e9db0d4ce +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrbt-11-bqmaq106.1/nmdc_wfrbt-11-bqmaq106.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa6694f05f4bd4723381613e9db0d4ce nmdc:dobj-11-0g3kxt46 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:794255024a25a0c3192c6f43912731e7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrbt-11-bqmaq106.1/nmdc_wfrbt-11-bqmaq106.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:794255024a25a0c3192c6f43912731e7 nmdc:dobj-11-ab4zhr46 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ce05cbc3681e8089f9fd5fae3a89cf74 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrbt-11-bqmaq106.1/nmdc_wfrbt-11-bqmaq106.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce05cbc3681e8089f9fd5fae3a89cf74 nmdc:dobj-11-jzkbch17 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d56586c5132a054503d94c3cdc48dc53 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrbt-11-bqmaq106.1/nmdc_wfrbt-11-bqmaq106.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d56586c5132a054503d94c3cdc48dc53 nmdc:dobj-11-ar6k6q13 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:743bfc4bb3270921c75ce54e15a37dc0 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrbt-11-bqmaq106.1/nmdc_wfrbt-11-bqmaq106.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:743bfc4bb3270921c75ce54e15a37dc0 nmdc:dobj-11-1qbc0f41 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b4c6a24108e24e65b227d185ce854bb +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrbt-11-bqmaq106.1/nmdc_wfrbt-11-bqmaq106.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b4c6a24108e24e65b227d185ce854bb nmdc:dobj-11-pvsara50 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e4ecfe41fcbe9420ec808087d35aa54 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qpt8n163/nmdc:wfrbt-11-bqmaq106.1/nmdc_wfrbt-11-bqmaq106.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e4ecfe41fcbe9420ec808087d35aa54 nmdc:dobj-11-37tr3710 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-qpt8n163 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqmaq106.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e3b72aff00532673d929233b3fd7f2b4 nmdc:wfrbt-11-bqmaq106.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-qpt8n163 +INFO:root:omics_processing_id: nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c382b274024654e4d144ac18e9173dcd nmdc:dobj-11-z861cg72 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a8wqzf17 +INFO:root:New activity id created for nmdc:omprc-11-a8wqzf17 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-phg2ak29.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrqc-11-phg2ak29.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4dd67f816e7c598e051cf940a7bb039b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrqc-11-phg2ak29.1/nmdc_wfrqc-11-phg2ak29.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd67f816e7c598e051cf940a7bb039b nmdc:dobj-11-bexf3z25 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-phg2ak29.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a054fc9591ef5368756cad401455e7d5 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrqc-11-phg2ak29.1/nmdc_wfrqc-11-phg2ak29.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a054fc9591ef5368756cad401455e7d5 nmdc:dobj-11-rdym7t63 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-phg2ak29.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:83094909ffa6cb953e83acce2df3d510 nmdc:wfrqc-11-phg2ak29.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-a8wqzf17 +INFO:root:New activity id created for nmdc:omprc-11-a8wqzf17 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-a9kr9441.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfmgas-11-a9kr9441.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6c1411164490b78c63b266858a538d2a +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfmgas-11-a9kr9441.1/nmdc_wfmgas-11-a9kr9441.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6c1411164490b78c63b266858a538d2a nmdc:dobj-11-ef4rhm77 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a9kr9441.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:05f620376bdfbafc8beba3a72d08d100 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfmgas-11-a9kr9441.1/nmdc_wfmgas-11-a9kr9441.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:05f620376bdfbafc8beba3a72d08d100 nmdc:dobj-11-np91q466 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a9kr9441.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a55112fbc8924ce4abe2c605289b2131 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfmgas-11-a9kr9441.1/nmdc_wfmgas-11-a9kr9441.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a55112fbc8924ce4abe2c605289b2131 nmdc:dobj-11-wwpk6x22 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a9kr9441.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:587196752d466b85487ab744c52e150b +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfmgas-11-a9kr9441.1/nmdc_wfmgas-11-a9kr9441.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:587196752d466b85487ab744c52e150b nmdc:dobj-11-qymy7m34 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a9kr9441.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89b89039c67e748426cce3ab0d22cde5 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfmgas-11-a9kr9441.1/nmdc_wfmgas-11-a9kr9441.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89b89039c67e748426cce3ab0d22cde5 nmdc:dobj-11-dg7pj309 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a9kr9441.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:83094909ffa6cb953e83acce2df3d510 nmdc:wfmgas-11-a9kr9441.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-a8wqzf17 +INFO:root:New activity id created for nmdc:omprc-11-a8wqzf17 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-zyzxya18.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c8b6edda6311a60639ddaed2fab2178 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c8b6edda6311a60639ddaed2fab2178 nmdc:dobj-11-k57rn610 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ba1b47f8dc0008b153f81954aa921533 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba1b47f8dc0008b153f81954aa921533 nmdc:dobj-11-0rcp9736 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88c9c0fc5ed3e33bb09e68d6252f7e77 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88c9c0fc5ed3e33bb09e68d6252f7e77 nmdc:dobj-11-5tce0m17 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9655cb5f564767b449588f97a537567 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9655cb5f564767b449588f97a537567 nmdc:dobj-11-t8csws56 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d7cab5833b7c9e73bae684df9fe7b30e +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7cab5833b7c9e73bae684df9fe7b30e nmdc:dobj-11-n0xrz067 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e1d31c6384d1547391af45a5cfd08ec7 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e1d31c6384d1547391af45a5cfd08ec7 nmdc:dobj-11-bde46j87 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc1ca2915393629a37c8f5624d4cc858 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc1ca2915393629a37c8f5624d4cc858 nmdc:dobj-11-tfyrv362 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9754a792e299060de625e6b7d4521ca1 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9754a792e299060de625e6b7d4521ca1 nmdc:dobj-11-sqxtcs35 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6237db68c6059132c58177e0545f8a44 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a8wqzf17/nmdc:wfrbt-11-zyzxya18.1/nmdc_wfrbt-11-zyzxya18.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6237db68c6059132c58177e0545f8a44 nmdc:dobj-11-2v353s68 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a8wqzf17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zyzxya18.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:83094909ffa6cb953e83acce2df3d510 nmdc:wfrbt-11-zyzxya18.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a8wqzf17 +INFO:root:omics_processing_id: nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bd6aa13604e5f84693d8fc16bb198a7 nmdc:dobj-11-zp74ns49 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-se1vxx80 +INFO:root:New activity id created for nmdc:omprc-11-se1vxx80 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zg504658.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrqc-11-zg504658.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f6d24238d08dffade88d1ce66014de7 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrqc-11-zg504658.1/nmdc_wfrqc-11-zg504658.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f6d24238d08dffade88d1ce66014de7 nmdc:dobj-11-wz36k857 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zg504658.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8dce34d60f348ad951c6715e12acd4d +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrqc-11-zg504658.1/nmdc_wfrqc-11-zg504658.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8dce34d60f348ad951c6715e12acd4d nmdc:dobj-11-7fzqq266 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zg504658.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ef75edae55c7ab0df3a868000db8d10f nmdc:wfrqc-11-zg504658.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-se1vxx80 +INFO:root:New activity id created for nmdc:omprc-11-se1vxx80 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-g4qz8m73.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfmgas-11-g4qz8m73.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89e544b99041278a3298a1d1e063833c +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfmgas-11-g4qz8m73.1/nmdc_wfmgas-11-g4qz8m73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89e544b99041278a3298a1d1e063833c nmdc:dobj-11-nka82a68 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4qz8m73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4318275e7b45e297fdc984541426f451 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfmgas-11-g4qz8m73.1/nmdc_wfmgas-11-g4qz8m73.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4318275e7b45e297fdc984541426f451 nmdc:dobj-11-86r36s03 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4qz8m73.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6bda392f0707bdcb3196338220737ad2 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfmgas-11-g4qz8m73.1/nmdc_wfmgas-11-g4qz8m73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6bda392f0707bdcb3196338220737ad2 nmdc:dobj-11-knnb4p94 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4qz8m73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65b3444b8d46933d5c433304c40e8ba2 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfmgas-11-g4qz8m73.1/nmdc_wfmgas-11-g4qz8m73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65b3444b8d46933d5c433304c40e8ba2 nmdc:dobj-11-8rhxf023 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nmdc:omprc-11-se1vxx80 +INFO:root:New activity id created for nmdc:omprc-11-se1vxx80 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ka74w081.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d93abbe081ae1aa602602562e2ee691c +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1/nmdc_wfrbt-11-ka74w081.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d93abbe081ae1aa602602562e2ee691c nmdc:dobj-11-941b3586 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ka74w081.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ad89d4c9f471d3f9e77d73f7de40b27 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1/nmdc_wfrbt-11-ka74w081.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ad89d4c9f471d3f9e77d73f7de40b27 nmdc:dobj-11-ttd50066 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ka74w081.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8707f0db26749459c4d4697e8b958f9c +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1/nmdc_wfrbt-11-ka74w081.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8707f0db26749459c4d4697e8b958f9c nmdc:dobj-11-dh1skw77 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-se1vxx80 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1/nmdc_wfrbt-11-ka74w081.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:027d3e559ad01c0ecd8683bafe33b5fe nmdc:dobj-11-a0bj9p10 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ka74w081.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:845b97f81553ab76a3a04813422023a9 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1/nmdc_wfrbt-11-ka74w081.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:845b97f81553ab76a3a04813422023a9 nmdc:dobj-11-wa9bcr88 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ka74w081.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:432b0e11441b382395953b673dc1b304 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1/nmdc_wfrbt-11-ka74w081.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:432b0e11441b382395953b673dc1b304 nmdc:dobj-11-6gb5fk73 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ka74w081.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32c6f266e53cd268961e46a2b0d9ae10 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1/nmdc_wfrbt-11-ka74w081.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32c6f266e53cd268961e46a2b0d9ae10 nmdc:dobj-11-cw20sc54 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ka74w081.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fd7f83ad1278d7945e58a46a4948a0c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-se1vxx80/nmdc:wfrbt-11-ka74w081.1/nmdc_wfrbt-11-ka74w081.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fd7f83ad1278d7945e58a46a4948a0c nmdc:dobj-11-7xjxkr10 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-se1vxx80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ka74w081.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ef75edae55c7ab0df3a868000db8d10f nmdc:wfrbt-11-ka74w081.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-se1vxx80 +INFO:root:omics_processing_id: nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8cb57d6b0b818cf021749773bb24a65 nmdc:dobj-11-9xxnws75 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-c0hm7m26 +INFO:root:New activity id created for nmdc:omprc-11-c0hm7m26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-s6pyq759.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfrqc-11-s6pyq759.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8587fa53ae83bf01533cb5b5b13e88b6 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfrqc-11-s6pyq759.1/nmdc_wfrqc-11-s6pyq759.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8587fa53ae83bf01533cb5b5b13e88b6 nmdc:dobj-11-dtbj5689 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-s6pyq759.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df3a22eed25aff5cbe18609dd6fbac28 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfrqc-11-s6pyq759.1/nmdc_wfrqc-11-s6pyq759.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df3a22eed25aff5cbe18609dd6fbac28 nmdc:dobj-11-ar7tqk29 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-s6pyq759.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:41da919c926cec39c831c2bfb36b68d1 nmdc:wfrqc-11-s6pyq759.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-c0hm7m26 +INFO:root:New activity id created for nmdc:omprc-11-c0hm7m26 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5yz2zy06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfmgas-11-5yz2zy06.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a4c30ad38347a86cbf7c0ad25de2fd46 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfmgas-11-5yz2zy06.1/nmdc_wfmgas-11-5yz2zy06.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4c30ad38347a86cbf7c0ad25de2fd46 nmdc:dobj-11-49zvdg38 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5yz2zy06.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c006f8ad6d5d6a6a9bce1b836c02851a +INFO:root:New file path computed for Assembly Scaffolds: 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nmdc_wfmgas-11-5yz2zy06.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8403cf6bb7a246b36e4e4b5c771081a3 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfmgas-11-5yz2zy06.1/nmdc_wfmgas-11-5yz2zy06.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8403cf6bb7a246b36e4e4b5c771081a3 nmdc:dobj-11-emf1t302 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5yz2zy06.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e9fa0d0b48dce5473a33c789f544499 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfmgas-11-5yz2zy06.1/nmdc_wfmgas-11-5yz2zy06.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e9fa0d0b48dce5473a33c789f544499 nmdc:dobj-11-ner9hw34 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nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kttj2h26.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f12a0ef8b6c2634b4cf9cb3a2d4fd261 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfrbt-11-kttj2h26.1/nmdc_wfrbt-11-kttj2h26.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f12a0ef8b6c2634b4cf9cb3a2d4fd261 nmdc:dobj-11-wbc5hw33 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kttj2h26.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e060fb1e9254da3eb0b736cd3134a23 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfrbt-11-kttj2h26.1/nmdc_wfrbt-11-kttj2h26.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e060fb1e9254da3eb0b736cd3134a23 nmdc:dobj-11-tfcp7y89 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kttj2h26.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1827c9d5dcfd1fa162e46a0f4d04513b +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfrbt-11-kttj2h26.1/nmdc_wfrbt-11-kttj2h26.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1827c9d5dcfd1fa162e46a0f4d04513b nmdc:dobj-11-zy3wx734 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kttj2h26.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e49cd3f9087ef2b53ad49a698d7d36a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfrbt-11-kttj2h26.1/nmdc_wfrbt-11-kttj2h26.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e49cd3f9087ef2b53ad49a698d7d36a nmdc:dobj-11-4qwret81 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kttj2h26.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c86a36f02b69d0b9db967b9cfee9d72 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c0hm7m26/nmdc:wfrbt-11-kttj2h26.1/nmdc_wfrbt-11-kttj2h26.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c86a36f02b69d0b9db967b9cfee9d72 nmdc:dobj-11-zj90dw84 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-c0hm7m26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kttj2h26.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:41da919c926cec39c831c2bfb36b68d1 nmdc:wfrbt-11-kttj2h26.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-c0hm7m26 +INFO:root:omics_processing_id: nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:662c1168f06ffe7550ddbb8420e08125 nmdc:dobj-11-9twf5517 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-r78ghw23 +INFO:root:New activity id created for nmdc:omprc-11-r78ghw23 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rbj04p81.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrqc-11-rbj04p81.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:55cc27401b313aaaf9e2070314c2d115 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrqc-11-rbj04p81.1/nmdc_wfrqc-11-rbj04p81.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:55cc27401b313aaaf9e2070314c2d115 nmdc:dobj-11-6q6a3x86 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rbj04p81.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f847b83e4f6ca48923f62ae709b0a4c9 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrqc-11-rbj04p81.1/nmdc_wfrqc-11-rbj04p81.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f847b83e4f6ca48923f62ae709b0a4c9 nmdc:dobj-11-2fsgfg20 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rbj04p81.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:33b7b461a2f2af07dfbf9f3e37bf824a nmdc:wfrqc-11-rbj04p81.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-r78ghw23 +INFO:root:New activity id created for nmdc:omprc-11-r78ghw23 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8eermc44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfmgas-11-8eermc44.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7db2e9c70f20c04042106166f63b4947 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfmgas-11-8eermc44.1/nmdc_wfmgas-11-8eermc44.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7db2e9c70f20c04042106166f63b4947 nmdc:dobj-11-p0sphm10 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8eermc44.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0d99fd5734766265a265c7d6a93d7f62 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfmgas-11-8eermc44.1/nmdc_wfmgas-11-8eermc44.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d99fd5734766265a265c7d6a93d7f62 nmdc:dobj-11-gwnkc668 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8eermc44.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16c954d5cade3d8f0ded44fc2548ae92 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfmgas-11-8eermc44.1/nmdc_wfmgas-11-8eermc44.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16c954d5cade3d8f0ded44fc2548ae92 nmdc:dobj-11-erv0pt85 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8eermc44.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcfa389c734641d66a2a6f0cff3c1044 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfmgas-11-8eermc44.1/nmdc_wfmgas-11-8eermc44.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcfa389c734641d66a2a6f0cff3c1044 nmdc:dobj-11-6jjvn503 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8eermc44.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c14d747bf80116d28fd587b3175021a +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfmgas-11-8eermc44.1/nmdc_wfmgas-11-8eermc44.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c14d747bf80116d28fd587b3175021a nmdc:dobj-11-fs05zh72 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8eermc44.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:33b7b461a2f2af07dfbf9f3e37bf824a nmdc:wfmgas-11-8eermc44.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-r78ghw23 +INFO:root:New activity id created for nmdc:omprc-11-r78ghw23 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-d273v059.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e9d8fb9cb002364698d68b4145e1ef3 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e9d8fb9cb002364698d68b4145e1ef3 nmdc:dobj-11-310g0513 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:54009cb91c04a856f5926c941ac11dc1 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54009cb91c04a856f5926c941ac11dc1 nmdc:dobj-11-wxf1w517 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:025d7c5753d72d31d55f610423a6b9f5 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:025d7c5753d72d31d55f610423a6b9f5 nmdc:dobj-11-q4wdv179 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d743bd8cadfe21c309d781bf5c2c39c +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d743bd8cadfe21c309d781bf5c2c39c nmdc:dobj-11-bp7pc474 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93a97b8a925a529f42dc0237e4237daf +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93a97b8a925a529f42dc0237e4237daf nmdc:dobj-11-gnpf0s51 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45ab541763640ce7ba4b92d25e4b6d07 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45ab541763640ce7ba4b92d25e4b6d07 nmdc:dobj-11-2p60pw73 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a81d71acaf4e4360d182d68ea0a7b7c +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a81d71acaf4e4360d182d68ea0a7b7c nmdc:dobj-11-xsfzz006 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9be34de59e78dd9218a1f2fe36b4a4a9 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9be34de59e78dd9218a1f2fe36b4a4a9 nmdc:dobj-11-4dx6k404 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e573fe587bf028cff22043e0a045ac50 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r78ghw23/nmdc:wfrbt-11-d273v059.1/nmdc_wfrbt-11-d273v059.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e573fe587bf028cff22043e0a045ac50 nmdc:dobj-11-zzqn5n30 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-r78ghw23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d273v059.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:33b7b461a2f2af07dfbf9f3e37bf824a nmdc:wfrbt-11-d273v059.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-r78ghw23 +INFO:root:omics_processing_id: nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a59c2e51e68688909873b960fbcade60 nmdc:dobj-11-wq9zw388 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-4kyy5h83 +INFO:root:New activity id created for nmdc:omprc-11-4kyy5h83 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-eaq2da30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrqc-11-eaq2da30.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6f5298a8157870979e6b712b0d2dbcee +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrqc-11-eaq2da30.1/nmdc_wfrqc-11-eaq2da30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f5298a8157870979e6b712b0d2dbcee nmdc:dobj-11-0vffgh91 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-eaq2da30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:06f85b06f11ab75325f478057fda5bd5 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrqc-11-eaq2da30.1/nmdc_wfrqc-11-eaq2da30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06f85b06f11ab75325f478057fda5bd5 nmdc:dobj-11-h00z1b93 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-eaq2da30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:aeea9768aaac84b033af4d9f7cdc6e43 nmdc:wfrqc-11-eaq2da30.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-4kyy5h83 +INFO:root:New activity id created for nmdc:omprc-11-4kyy5h83 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-zebrn930.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfmgas-11-zebrn930.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6748ea668a6510c39493c50c45117df5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfmgas-11-zebrn930.1/nmdc_wfmgas-11-zebrn930.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6748ea668a6510c39493c50c45117df5 nmdc:dobj-11-j885mq23 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zebrn930.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:754a6d6b81de7e057a2099208fb3bde5 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfmgas-11-zebrn930.1/nmdc_wfmgas-11-zebrn930.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754a6d6b81de7e057a2099208fb3bde5 nmdc:dobj-11-78d6p815 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zebrn930.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d7f58ac7d84edab013d85f7be7ae19d0 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfmgas-11-zebrn930.1/nmdc_wfmgas-11-zebrn930.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7f58ac7d84edab013d85f7be7ae19d0 nmdc:dobj-11-sn82j675 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zebrn930.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62626e164e41185a97b007040abb17d8 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfmgas-11-zebrn930.1/nmdc_wfmgas-11-zebrn930.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62626e164e41185a97b007040abb17d8 nmdc:dobj-11-03f6ya76 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrbt-11-efrzta62.1/nmdc_wfrbt-11-efrzta62.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54b3454221210fa273418996b4ffecc0 nmdc:dobj-11-tncpz968 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-efrzta62.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:811907ae27f58e7f4bb2f1c9d5dd138b +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrbt-11-efrzta62.1/nmdc_wfrbt-11-efrzta62.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:811907ae27f58e7f4bb2f1c9d5dd138b nmdc:dobj-11-bba3p721 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-4kyy5h83 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrbt-11-efrzta62.1/nmdc_wfrbt-11-efrzta62.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0ede918744dedf62ae49083f16e2dc5 nmdc:dobj-11-6k3xff76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-efrzta62.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d95aeb2cf7af15588c2f5c2a39843fed +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrbt-11-efrzta62.1/nmdc_wfrbt-11-efrzta62.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d95aeb2cf7af15588c2f5c2a39843fed nmdc:dobj-11-hpeaay24 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-efrzta62.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c00db296fec0a0dbf9f2e1b9f658d23 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrbt-11-efrzta62.1/nmdc_wfrbt-11-efrzta62.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c00db296fec0a0dbf9f2e1b9f658d23 nmdc:dobj-11-41hmw041 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-efrzta62.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23f112fd8982d39a6dcd836682efed85 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrbt-11-efrzta62.1/nmdc_wfrbt-11-efrzta62.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23f112fd8982d39a6dcd836682efed85 nmdc:dobj-11-h20fbe31 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-efrzta62.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34033bb2103e9044480e6b757e77755d +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kyy5h83/nmdc:wfrbt-11-efrzta62.1/nmdc_wfrbt-11-efrzta62.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34033bb2103e9044480e6b757e77755d nmdc:dobj-11-e0qrr373 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-4kyy5h83 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-efrzta62.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:aeea9768aaac84b033af4d9f7cdc6e43 nmdc:wfrbt-11-efrzta62.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-4kyy5h83 +INFO:root:omics_processing_id: nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d5538abb50714cda9f3348524197bc1 nmdc:dobj-11-jb4x0m25 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-mthj7281 +INFO:root:New activity id created for nmdc:omprc-11-mthj7281 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gtg41s62.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrqc-11-gtg41s62.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:edbdf3fc9620f89efa8ec4aeb3a09fc4 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrqc-11-gtg41s62.1/nmdc_wfrqc-11-gtg41s62.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:edbdf3fc9620f89efa8ec4aeb3a09fc4 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nmdc_wfmgas-11-w4f2g502.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7a9515be39691c6101ac6e25028be3d4 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfmgas-11-w4f2g502.1/nmdc_wfmgas-11-w4f2g502.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7a9515be39691c6101ac6e25028be3d4 nmdc:dobj-11-3caejk73 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-w4f2g502.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:abf47e5b95bd9f3de637a023a537df52 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfmgas-11-w4f2g502.1/nmdc_wfmgas-11-w4f2g502.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abf47e5b95bd9f3de637a023a537df52 nmdc:dobj-11-yg5hc622 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d59401ef7307e23dfff2795add6022b nmdc:dobj-11-3ydjg191 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dbf6eb4338d0dcb043b9d6d0c7134371 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrbt-11-911azt73.1/nmdc_wfrbt-11-911azt73.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dbf6eb4338d0dcb043b9d6d0c7134371 nmdc:dobj-11-jv96dn57 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b4953e10a5307ad6470ceacaedd680e8 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrbt-11-911azt73.1/nmdc_wfrbt-11-911azt73.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b4953e10a5307ad6470ceacaedd680e8 nmdc:dobj-11-yvy47286 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8725aa4ef5d9863cd49d7e38fb32a5a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrbt-11-911azt73.1/nmdc_wfrbt-11-911azt73.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8725aa4ef5d9863cd49d7e38fb32a5a nmdc:dobj-11-w91t8x38 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7c10ab54d94fc4078e7583a2c827919a +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrbt-11-911azt73.1/nmdc_wfrbt-11-911azt73.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c10ab54d94fc4078e7583a2c827919a nmdc:dobj-11-29nrdt39 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd5e0a7eeb4f0aa19b624d1008698d89 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrbt-11-911azt73.1/nmdc_wfrbt-11-911azt73.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd5e0a7eeb4f0aa19b624d1008698d89 nmdc:dobj-11-0hmf1771 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ea9a969e732ee7bb7fd412bc4897001 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrbt-11-911azt73.1/nmdc_wfrbt-11-911azt73.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ea9a969e732ee7bb7fd412bc4897001 nmdc:dobj-11-fjvt1w34 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:767a0eabf823b4f2f78c47d1137604a8 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrbt-11-911azt73.1/nmdc_wfrbt-11-911azt73.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:767a0eabf823b4f2f78c47d1137604a8 nmdc:dobj-11-n86c2m51 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8bdcccf8df18558728bfdc3f060074e6 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mthj7281/nmdc:wfrbt-11-911azt73.1/nmdc_wfrbt-11-911azt73.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8bdcccf8df18558728bfdc3f060074e6 nmdc:dobj-11-zxe3f338 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-mthj7281 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-911azt73.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ab4424448f381faae7005674452f9044 nmdc:wfrbt-11-911azt73.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-mthj7281 +INFO:root:omics_processing_id: nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba4c04b832d41fd4d6a3869ee62efa80 nmdc:dobj-11-kdvqz845 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-cpkj0m55 +INFO:root:New activity id created for nmdc:omprc-11-cpkj0m55 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-kdj41q40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrqc-11-kdj41q40.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:393bf2bc597f26554d32d1f94ad04164 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrqc-11-kdj41q40.1/nmdc_wfrqc-11-kdj41q40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:393bf2bc597f26554d32d1f94ad04164 nmdc:dobj-11-400a8353 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kdj41q40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:856ca2e8662c198a6332c41d9aba4d96 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrqc-11-kdj41q40.1/nmdc_wfrqc-11-kdj41q40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:856ca2e8662c198a6332c41d9aba4d96 nmdc:dobj-11-dfafvy87 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kdj41q40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ecc9ab8da1a08fbe886a179aef6fde4f nmdc:wfrqc-11-kdj41q40.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-cpkj0m55 +INFO:root:New activity id created for nmdc:omprc-11-cpkj0m55 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-t2gmd571.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfmgas-11-t2gmd571.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:285d6dd1a0316c2963ffd1aa35847d36 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfmgas-11-t2gmd571.1/nmdc_wfmgas-11-t2gmd571.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:285d6dd1a0316c2963ffd1aa35847d36 nmdc:dobj-11-8vd7tm67 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t2gmd571.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53a39ff73617ead15c26a37f73a2beea +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfmgas-11-t2gmd571.1/nmdc_wfmgas-11-t2gmd571.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53a39ff73617ead15c26a37f73a2beea nmdc:dobj-11-4zjp9x95 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t2gmd571.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3c64bb2d8838e1cd17526264199e6c88 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfmgas-11-t2gmd571.1/nmdc_wfmgas-11-t2gmd571.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c64bb2d8838e1cd17526264199e6c88 nmdc:dobj-11-5m08hp72 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t2gmd571.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7d210a6d529946cb490777ad196cfd3 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfmgas-11-t2gmd571.1/nmdc_wfmgas-11-t2gmd571.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7d210a6d529946cb490777ad196cfd3 nmdc:dobj-11-5m56e632 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t2gmd571.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:feaea4de1fb170c888dc9795112929a4 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfmgas-11-t2gmd571.1/nmdc_wfmgas-11-t2gmd571.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:feaea4de1fb170c888dc9795112929a4 nmdc:dobj-11-51p7kh35 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t2gmd571.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ecc9ab8da1a08fbe886a179aef6fde4f nmdc:wfmgas-11-t2gmd571.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-cpkj0m55 +INFO:root:New activity id created for nmdc:omprc-11-cpkj0m55 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ecjmvf08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a080001aa8294d2fa03efbaad082ca76 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a080001aa8294d2fa03efbaad082ca76 nmdc:dobj-11-fqrfzd87 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c053ded0c5978064e6e67d306a9b94c8 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c053ded0c5978064e6e67d306a9b94c8 nmdc:dobj-11-fn2ne604 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:abd7ae4c2001fa1efe61492662d4e91f +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abd7ae4c2001fa1efe61492662d4e91f nmdc:dobj-11-r22yrh83 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:69c2d61f1660c009caf739d192d490f2 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:69c2d61f1660c009caf739d192d490f2 nmdc:dobj-11-ymc2gy71 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52ccb649c98f1ca8b7d722afded8ec15 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52ccb649c98f1ca8b7d722afded8ec15 nmdc:dobj-11-f771gp34 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0a27bb9925d5a5444a3bab9a4e1f5e3 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0a27bb9925d5a5444a3bab9a4e1f5e3 nmdc:dobj-11-tkmts006 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8cb7d7fadfc3b868eed70276ca8c368 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8cb7d7fadfc3b868eed70276ca8c368 nmdc:dobj-11-f0nhew50 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7bb093ade703bf6884ff6acb107841b3 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bb093ade703bf6884ff6acb107841b3 nmdc:dobj-11-znb3ze03 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da7f7b895071e15ad16f88540411ae99 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cpkj0m55/nmdc:wfrbt-11-ecjmvf08.1/nmdc_wfrbt-11-ecjmvf08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da7f7b895071e15ad16f88540411ae99 nmdc:dobj-11-vhk4t067 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-cpkj0m55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ecjmvf08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ecc9ab8da1a08fbe886a179aef6fde4f nmdc:wfrbt-11-ecjmvf08.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-cpkj0m55 +INFO:root:omics_processing_id: nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cdcf3dca009870a1cc9cc6112b3c6759 nmdc:dobj-11-wxyy2095 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-sn66gy21 +INFO:root:New activity id created for nmdc:omprc-11-sn66gy21 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mvv7sf36.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrqc-11-mvv7sf36.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31c3174bb0bd7c2a9761c3cf37d28786 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrqc-11-mvv7sf36.1/nmdc_wfrqc-11-mvv7sf36.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31c3174bb0bd7c2a9761c3cf37d28786 nmdc:dobj-11-z37r7s47 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mvv7sf36.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fe1b9edd18ed77f1e9c0ddd5aa1a1ba +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrqc-11-mvv7sf36.1/nmdc_wfrqc-11-mvv7sf36.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fe1b9edd18ed77f1e9c0ddd5aa1a1ba nmdc:dobj-11-ek8t4235 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mvv7sf36.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6936ebfc70fb45862a1a1de93d183d10 nmdc:wfrqc-11-mvv7sf36.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-sn66gy21 +INFO:root:New activity id created for nmdc:omprc-11-sn66gy21 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-gxng7v80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfmgas-11-gxng7v80.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e90ecbb2e2273cb3a1505fb7e154f044 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfmgas-11-gxng7v80.1/nmdc_wfmgas-11-gxng7v80.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e90ecbb2e2273cb3a1505fb7e154f044 nmdc:dobj-11-cryvv891 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gxng7v80.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb1c7f86d90992230a2f024f5645963e +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfmgas-11-gxng7v80.1/nmdc_wfmgas-11-gxng7v80.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb1c7f86d90992230a2f024f5645963e nmdc:dobj-11-7pys0z34 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gxng7v80.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:018b15277e8897654e91a147a1b68996 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfmgas-11-gxng7v80.1/nmdc_wfmgas-11-gxng7v80.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:018b15277e8897654e91a147a1b68996 nmdc:dobj-11-zmp0q747 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gxng7v80.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6a9a6af329a0d0225b55b56c13bbdc5 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfmgas-11-gxng7v80.1/nmdc_wfmgas-11-gxng7v80.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6a9a6af329a0d0225b55b56c13bbdc5 nmdc:dobj-11-x40bpa59 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nmdc:omprc-11-sn66gy21 +INFO:root:New activity id created for nmdc:omprc-11-sn66gy21 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-hz6p9d58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dbe71762f6873a1b2e6711c299d285d7 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dbe71762f6873a1b2e6711c299d285d7 nmdc:dobj-11-xvv64d43 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bf089a8272c5f4c3ee89b1779f372797 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf089a8272c5f4c3ee89b1779f372797 nmdc:dobj-11-nk6hz975 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea72a63add7b51cc9b76f5ea94321988 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea72a63add7b51cc9b76f5ea94321988 nmdc:dobj-11-71p7zv29 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0303563d28924f20d44ff9d8f0231b9d +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0303563d28924f20d44ff9d8f0231b9d nmdc:dobj-11-wzaxyg91 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdd4f8abd2e1954ec2183e2f83fea284 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdd4f8abd2e1954ec2183e2f83fea284 nmdc:dobj-11-ha8y8p93 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff685ef5ac3ea2442d80805e7c045bd7 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff685ef5ac3ea2442d80805e7c045bd7 nmdc:dobj-11-8xxwx951 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48fde9c36cd8284e7aeed0be80072986 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48fde9c36cd8284e7aeed0be80072986 nmdc:dobj-11-ne0fmq15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e617ecc2397830745043129b0ad3914 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e617ecc2397830745043129b0ad3914 nmdc:dobj-11-w08vxh85 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8cd20130866ad47a71b14cc7279082e8 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sn66gy21/nmdc:wfrbt-11-hz6p9d58.1/nmdc_wfrbt-11-hz6p9d58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8cd20130866ad47a71b14cc7279082e8 nmdc:dobj-11-6gywta30 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-sn66gy21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hz6p9d58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6936ebfc70fb45862a1a1de93d183d10 nmdc:wfrbt-11-hz6p9d58.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-9th2rh57/nmdc:wfmgas-11-sk02fb49.1/nmdc_wfmgas-11-sk02fb49.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:197ca0e0315253fd546c3cd074435787 nmdc:dobj-11-1jjh9s66 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-9th2rh57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sk02fb49.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7fb2a430bae23a78655068190e656b46 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9th2rh57/nmdc:wfmgas-11-sk02fb49.1/nmdc_wfmgas-11-sk02fb49.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fb2a430bae23a78655068190e656b46 nmdc:dobj-11-da8maj54 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9th2rh57 +INFO:nmdc_automation.re_iding.base:new_filename: 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9th2rh57/nmdc:wfrbt-11-sxrvpa35.1/nmdc_wfrbt-11-sxrvpa35.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6d6446d08a4b8818d1fb4232a9bc2a9 nmdc:dobj-11-0fg1yt94 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9th2rh57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxrvpa35.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0a59dcf578bcff57cad6ed139873515b +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9th2rh57/nmdc:wfrbt-11-sxrvpa35.1/nmdc_wfrbt-11-sxrvpa35.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a59dcf578bcff57cad6ed139873515b nmdc:dobj-11-86cpdh91 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9th2rh57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxrvpa35.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ceae5f5cf9b2a13aba7ba43711605f3 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9th2rh57/nmdc:wfrbt-11-sxrvpa35.1/nmdc_wfrbt-11-sxrvpa35.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ceae5f5cf9b2a13aba7ba43711605f3 nmdc:dobj-11-b5zznb12 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9th2rh57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxrvpa35.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85609520868ab0dbfa799df336435830 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9th2rh57/nmdc:wfrbt-11-sxrvpa35.1/nmdc_wfrbt-11-sxrvpa35.1_centrifuge_krona.html 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nmdc:9203eedde3915f276bead4c4cdb7c1ee nmdc:dobj-11-q5sh5881 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-65m95r84.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d0e5b9f3af0b8d150200b39f6e282f2 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfmgas-11-65m95r84.1/nmdc_wfmgas-11-65m95r84.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d0e5b9f3af0b8d150200b39f6e282f2 nmdc:dobj-11-fjhcp606 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-65m95r84.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad11192f6278e0887651a6045b2c543d +INFO:root:New file path computed for Assembly Coverage BAM: 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nmdc:bf4923aa1e34686dc603f86d6d740d7b +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf4923aa1e34686dc603f86d6d740d7b nmdc:dobj-11-5xpemt20 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0faf7a60bf8dc7bd30d555ae7b1b805 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0faf7a60bf8dc7bd30d555ae7b1b805 nmdc:dobj-11-w4b4dz60 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4219c0b2196ea56a7fdf54b5df756d48 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4219c0b2196ea56a7fdf54b5df756d48 nmdc:dobj-11-jzr26238 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc12c188ead4795ebc408a315da54705 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc12c188ead4795ebc408a315da54705 nmdc:dobj-11-jsz4ds41 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6512fdbceb373c00780bef6ef2a0b036 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6512fdbceb373c00780bef6ef2a0b036 nmdc:dobj-11-bprk9h78 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f3aaac311669064fb82f5aa96b1d1ac +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f3aaac311669064fb82f5aa96b1d1ac nmdc:dobj-11-896b1y86 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10c85b2b60321f12dbfa3d948173e7c4 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10c85b2b60321f12dbfa3d948173e7c4 nmdc:dobj-11-wgtk2246 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b97a7fb82a491b3a9f48986af33939b +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b97a7fb82a491b3a9f48986af33939b nmdc:dobj-11-bsj27175 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72503b130ec5f41dfa6a61f5d639e95f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v0cypx57/nmdc:wfrbt-11-t9v6fw24.1/nmdc_wfrbt-11-t9v6fw24.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72503b130ec5f41dfa6a61f5d639e95f nmdc:dobj-11-z5zwz176 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-v0cypx57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t9v6fw24.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:74ff56e6ebc9f4f07d1f916844d85cc0 nmdc:wfrbt-11-t9v6fw24.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-v0cypx57 +INFO:root:omics_processing_id: nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6fa010e48b16b03572e11278a1b1065 nmdc:dobj-11-9x3xrq93 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-mevp5p30 +INFO:root:New activity id created for nmdc:omprc-11-mevp5p30 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-w8j4a359.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrqc-11-w8j4a359.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:290d54f9b44813adb656b8cb6dd02fdf +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrqc-11-w8j4a359.1/nmdc_wfrqc-11-w8j4a359.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:290d54f9b44813adb656b8cb6dd02fdf nmdc:dobj-11-8zmm5j95 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w8j4a359.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b43756b2db7617d9a94d5046116aaee +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrqc-11-w8j4a359.1/nmdc_wfrqc-11-w8j4a359.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b43756b2db7617d9a94d5046116aaee nmdc:dobj-11-64te6756 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-w8j4a359.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8b2d7a6020afd474cabab4f05f824c3e nmdc:wfrqc-11-w8j4a359.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-mevp5p30 +INFO:root:New activity id created for nmdc:omprc-11-mevp5p30 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-b1q34s55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfmgas-11-b1q34s55.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b32d4b7cc7c3a4631ecb8dec3f19e1a +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfmgas-11-b1q34s55.1/nmdc_wfmgas-11-b1q34s55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b32d4b7cc7c3a4631ecb8dec3f19e1a nmdc:dobj-11-tcy26e37 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b1q34s55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d83bedb4b171e260646b5bdbac95dcc +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfmgas-11-b1q34s55.1/nmdc_wfmgas-11-b1q34s55.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d83bedb4b171e260646b5bdbac95dcc nmdc:dobj-11-9y6jqq78 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b1q34s55.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:328613f185eea1ff4498d7b242a6ce36 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfmgas-11-b1q34s55.1/nmdc_wfmgas-11-b1q34s55.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:328613f185eea1ff4498d7b242a6ce36 nmdc:dobj-11-8hvsm178 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b1q34s55.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:596e1a34a59b451f1b586d1c28108604 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfmgas-11-b1q34s55.1/nmdc_wfmgas-11-b1q34s55.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:596e1a34a59b451f1b586d1c28108604 nmdc:dobj-11-388v3m47 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrbt-11-mgs2yd74.1/nmdc_wfrbt-11-mgs2yd74.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22bc13faff7b6ff150afefbe612f0185 nmdc:dobj-11-r5eb7588 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mgs2yd74.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f92f5935ee5ed6922cff1dbbb5c69ad6 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrbt-11-mgs2yd74.1/nmdc_wfrbt-11-mgs2yd74.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f92f5935ee5ed6922cff1dbbb5c69ad6 nmdc:dobj-11-d9vy8e70 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-mevp5p30 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrbt-11-mgs2yd74.1/nmdc_wfrbt-11-mgs2yd74.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b57081d4b2b7ab1ec1c1ad7579751e9 nmdc:dobj-11-fr6set40 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mgs2yd74.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6c7b48ab7032fd09936de8859b3a22c4 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrbt-11-mgs2yd74.1/nmdc_wfrbt-11-mgs2yd74.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6c7b48ab7032fd09936de8859b3a22c4 nmdc:dobj-11-ykc5g663 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mgs2yd74.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:363fa86666d5b3a29bf31ca55cfa6be6 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrbt-11-mgs2yd74.1/nmdc_wfrbt-11-mgs2yd74.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:363fa86666d5b3a29bf31ca55cfa6be6 nmdc:dobj-11-78ykp306 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mgs2yd74.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0273e2ad35f92c0eb4f503156da1f67f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrbt-11-mgs2yd74.1/nmdc_wfrbt-11-mgs2yd74.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0273e2ad35f92c0eb4f503156da1f67f nmdc:dobj-11-mcvcmr46 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mgs2yd74.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:417c24be7cee1f2ebbe0f0f6cc5d9159 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mevp5p30/nmdc:wfrbt-11-mgs2yd74.1/nmdc_wfrbt-11-mgs2yd74.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:417c24be7cee1f2ebbe0f0f6cc5d9159 nmdc:dobj-11-gm63bp05 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-mevp5p30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mgs2yd74.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8b2d7a6020afd474cabab4f05f824c3e nmdc:wfrbt-11-mgs2yd74.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-mevp5p30 +INFO:root:omics_processing_id: nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ce0ac182f6b1d5e8e63d50fb7f6da4c nmdc:dobj-11-cbymnr47 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-p38ef780 +INFO:root:New activity id created for nmdc:omprc-11-p38ef780 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dy5frd80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrqc-11-dy5frd80.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d194a0c1d0d978630f55f8d447d8f0b7 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrqc-11-dy5frd80.1/nmdc_wfrqc-11-dy5frd80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d194a0c1d0d978630f55f8d447d8f0b7 nmdc:dobj-11-r5pbmf18 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dy5frd80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eac44708b0132985cec0f03ea3fce354 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrqc-11-dy5frd80.1/nmdc_wfrqc-11-dy5frd80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eac44708b0132985cec0f03ea3fce354 nmdc:dobj-11-w4chcc04 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dy5frd80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4864f56c83aa3d41fd8ebaac72d550a9 nmdc:wfrqc-11-dy5frd80.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-p38ef780 +INFO:root:New activity id created for nmdc:omprc-11-p38ef780 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rvta6t50.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfmgas-11-rvta6t50.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1fb83bac89e32d1934a4fea806921d9 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfmgas-11-rvta6t50.1/nmdc_wfmgas-11-rvta6t50.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1fb83bac89e32d1934a4fea806921d9 nmdc:dobj-11-crhyvq22 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rvta6t50.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a72d0ed74773ac7106b93198a7d0dcd +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfmgas-11-rvta6t50.1/nmdc_wfmgas-11-rvta6t50.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a72d0ed74773ac7106b93198a7d0dcd nmdc:dobj-11-68rdk557 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rvta6t50.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe37d79b634c9341707f5187a2f3a5bc +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfmgas-11-rvta6t50.1/nmdc_wfmgas-11-rvta6t50.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe37d79b634c9341707f5187a2f3a5bc nmdc:dobj-11-zhnds098 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rvta6t50.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94e37f9f3e4e1255addf3d1cce143f56 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfmgas-11-rvta6t50.1/nmdc_wfmgas-11-rvta6t50.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94e37f9f3e4e1255addf3d1cce143f56 nmdc:dobj-11-zs5b1166 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rvta6t50.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c7f4abaab76e3ccc170bd1dca356e7a9 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfmgas-11-rvta6t50.1/nmdc_wfmgas-11-rvta6t50.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7f4abaab76e3ccc170bd1dca356e7a9 nmdc:dobj-11-x2qf8t45 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrbt-11-t3bkd445.1/nmdc_wfrbt-11-t3bkd445.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72f169acb9d272cba89e91bacc0c2bd3 nmdc:dobj-11-sena4y06 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3bkd445.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ab9d13d2c30e4f651d8fa4e8aace279 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrbt-11-t3bkd445.1/nmdc_wfrbt-11-t3bkd445.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ab9d13d2c30e4f651d8fa4e8aace279 nmdc:dobj-11-5rfjk325 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3bkd445.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f116db35b6f29b67c40f7f819c6ecb2 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrbt-11-t3bkd445.1/nmdc_wfrbt-11-t3bkd445.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f116db35b6f29b67c40f7f819c6ecb2 nmdc:dobj-11-nsc7ry95 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3bkd445.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7a90a418ab75e3bf27057916d0673c3c +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrbt-11-t3bkd445.1/nmdc_wfrbt-11-t3bkd445.1_centrifuge_krona.html 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nmdc:531e963b7e8848c20b7005fb77920a69 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrbt-11-t3bkd445.1/nmdc_wfrbt-11-t3bkd445.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:531e963b7e8848c20b7005fb77920a69 nmdc:dobj-11-37ydmc70 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3bkd445.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed87e3a45688243403e73abb3a7c74bb +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p38ef780/nmdc:wfrbt-11-t3bkd445.1/nmdc_wfrbt-11-t3bkd445.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed87e3a45688243403e73abb3a7c74bb nmdc:dobj-11-32x0af59 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-p38ef780 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3bkd445.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4864f56c83aa3d41fd8ebaac72d550a9 nmdc:wfrbt-11-t3bkd445.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-p38ef780 +INFO:root:omics_processing_id: nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4890cb581312c33b0c79e9ca09a8327e nmdc:dobj-11-qr97dc06 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-08k5m384 +INFO:root:New activity id created for nmdc:omprc-11-08k5m384 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2xy2yq69.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrqc-11-2xy2yq69.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3de4a877fc4a8470f0f996d29a2f2e4 +INFO:root:New file path computed 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nmdc_wfrqc-11-2xy2yq69.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:f33cef64901e0b60a12f2a79b44fc02f nmdc:wfrqc-11-2xy2yq69.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-08k5m384 +INFO:root:New activity id created for nmdc:omprc-11-08k5m384 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-j1ygp693.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfmgas-11-j1ygp693.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cc8237e1e171d3c28f3206cee8b04b4 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfmgas-11-j1ygp693.1/nmdc_wfmgas-11-j1ygp693.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cc8237e1e171d3c28f3206cee8b04b4 nmdc:dobj-11-zke2ne62 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-08k5m384 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nmdc:ff854888370963e86e3e3953f99fbe8b nmdc:dobj-11-x3j3q727 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j1ygp693.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bde140c76437ac3dfd34e694b72ed24 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfmgas-11-j1ygp693.1/nmdc_wfmgas-11-j1ygp693.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bde140c76437ac3dfd34e694b72ed24 nmdc:dobj-11-g8t2na54 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j1ygp693.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22373fdbb98c6bfa0a4963b2fc543e35 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfmgas-11-j1ygp693.1/nmdc_wfmgas-11-j1ygp693.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22373fdbb98c6bfa0a4963b2fc543e35 nmdc:dobj-11-yqake832 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j1ygp693.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:f33cef64901e0b60a12f2a79b44fc02f nmdc:wfmgas-11-j1ygp693.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-08k5m384 +INFO:root:New activity id created for nmdc:omprc-11-08k5m384 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-5mv03647.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrbt-11-5mv03647.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e7b91e281cc5b895d334710146f4545 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrbt-11-5mv03647.1/nmdc_wfrbt-11-5mv03647.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e7b91e281cc5b895d334710146f4545 nmdc:dobj-11-5yf8k285 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mv03647.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8db09caae3abf57b3019de19d6d357a1 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrbt-11-5mv03647.1/nmdc_wfrbt-11-5mv03647.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8db09caae3abf57b3019de19d6d357a1 nmdc:dobj-11-9gbtxp89 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mv03647.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a0fe91d7e0c94fd3c621a296514e6bc +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrbt-11-5mv03647.1/nmdc_wfrbt-11-5mv03647.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a0fe91d7e0c94fd3c621a296514e6bc nmdc:dobj-11-e9x58y15 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mv03647.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad8fa15b5434e997ef11be4b7fd74128 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrbt-11-5mv03647.1/nmdc_wfrbt-11-5mv03647.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad8fa15b5434e997ef11be4b7fd74128 nmdc:dobj-11-yp5hca96 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mv03647.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb890d7fcb3691e5476298a4770513ad +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrbt-11-5mv03647.1/nmdc_wfrbt-11-5mv03647.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb890d7fcb3691e5476298a4770513ad nmdc:dobj-11-v1dqda14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mv03647.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e147adeba8c0002bf1098863c4270b90 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrbt-11-5mv03647.1/nmdc_wfrbt-11-5mv03647.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e147adeba8c0002bf1098863c4270b90 nmdc:dobj-11-e6h5j103 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-08k5m384 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mv03647.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:219b790038241dbef8ef4f7b911b013c +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-08k5m384/nmdc:wfrbt-11-5mv03647.1/nmdc_wfrbt-11-5mv03647.1_kraken2_classification.tsv 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nmdc:omprc-11-s7cb9r89 +INFO:root:New activity id created for nmdc:omprc-11-s7cb9r89 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qhzq2t33.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7cb9r89/nmdc:wfrqc-11-qhzq2t33.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:63f8837c8a3ae4a4a3876ebca7d1fb42 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7cb9r89/nmdc:wfrqc-11-qhzq2t33.1/nmdc_wfrqc-11-qhzq2t33.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:63f8837c8a3ae4a4a3876ebca7d1fb42 nmdc:dobj-11-nx5djr43 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-s7cb9r89 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qhzq2t33.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b4093449d60e97461f5cf4aa35b3f967 +INFO:root:New file path computed for QC Statistics: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7cb9r89/nmdc:wfmgas-11-2yzrx004.1/nmdc_wfmgas-11-2yzrx004.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d460b16901d1da48acaa28c10475c662 nmdc:dobj-11-zefv2k02 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-s7cb9r89 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2yzrx004.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2bae3ab8ae4171111159b9d3801d7b07 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7cb9r89/nmdc:wfmgas-11-2yzrx004.1/nmdc_wfmgas-11-2yzrx004.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2bae3ab8ae4171111159b9d3801d7b07 nmdc:dobj-11-b5x7zx62 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-s7cb9r89 +INFO:nmdc_automation.re_iding.base:new_filename: 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nmdc_wfrbt-11-z4ggsj07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6981dd6e1ed7c21163eb853accbd75fd +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7cb9r89/nmdc:wfrbt-11-z4ggsj07.1/nmdc_wfrbt-11-z4ggsj07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6981dd6e1ed7c21163eb853accbd75fd nmdc:dobj-11-4yn3eq78 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-s7cb9r89 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z4ggsj07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d731386227267d3e6cf8cb03d2e69e9a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7cb9r89/nmdc:wfrbt-11-z4ggsj07.1/nmdc_wfrbt-11-z4ggsj07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject 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nmdc:dobj-11-bezw8453 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zfq3wt41 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qefw7z52.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c541e27eb1eadfa581b56f305507a319 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zfq3wt41/nmdc:wfrqc-11-qefw7z52.1/nmdc_wfrqc-11-qefw7z52.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c541e27eb1eadfa581b56f305507a319 nmdc:dobj-11-5qd7aj14 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zfq3wt41 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qefw7z52.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:477a5fae679f957fa33f0c597cfc3037 nmdc:wfrqc-11-qefw7z52.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zfq3wt41 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nmdc:omprc-11-zfq3wt41 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j5f99d20.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b81cecc6f2bcb908d377117869c36dc +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zfq3wt41/nmdc:wfrbt-11-j5f99d20.1/nmdc_wfrbt-11-j5f99d20.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b81cecc6f2bcb908d377117869c36dc nmdc:dobj-11-kj901472 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zfq3wt41 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j5f99d20.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:164fa0daa94b00e84c0c5aa0abb12097 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zfq3wt41/nmdc:wfrbt-11-j5f99d20.1/nmdc_wfrbt-11-j5f99d20.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:164fa0daa94b00e84c0c5aa0abb12097 nmdc:dobj-11-gcjrw970 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zfq3wt41 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j5f99d20.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93356be0652ffc5fdb9b984bb182b38c +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zfq3wt41/nmdc:wfrbt-11-j5f99d20.1/nmdc_wfrbt-11-j5f99d20.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93356be0652ffc5fdb9b984bb182b38c nmdc:dobj-11-m55vrq53 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zfq3wt41 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j5f99d20.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6ce038b4bb4579569423330799012856 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zfq3wt41/nmdc:wfrbt-11-j5f99d20.1/nmdc_wfrbt-11-j5f99d20.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ce038b4bb4579569423330799012856 nmdc:dobj-11-qdwmaz34 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zfq3wt41 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j5f99d20.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72d8720d87afb23b2b4187211dc2c4eb +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zfq3wt41/nmdc:wfrbt-11-j5f99d20.1/nmdc_wfrbt-11-j5f99d20.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72d8720d87afb23b2b4187211dc2c4eb nmdc:dobj-11-ge9j3e92 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zfq3wt41 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j5f99d20.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:477a5fae679f957fa33f0c597cfc3037 nmdc:wfrbt-11-j5f99d20.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-zfq3wt41 +INFO:root:omics_processing_id: nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca08abf01531eb4e621b68cec5de570e nmdc:dobj-11-w7y9qj77 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-wp78xt67 +INFO:root:New activity id created for nmdc:omprc-11-wp78xt67 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-m6e80831.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrqc-11-m6e80831.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cca375dcb0d751f506fd8c50a2fe3216 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrqc-11-m6e80831.1/nmdc_wfrqc-11-m6e80831.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cca375dcb0d751f506fd8c50a2fe3216 nmdc:dobj-11-y30hbb67 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-m6e80831.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2b38e3279270b8a9410824874fd2db4 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrqc-11-m6e80831.1/nmdc_wfrqc-11-m6e80831.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2b38e3279270b8a9410824874fd2db4 nmdc:dobj-11-chdr6370 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-m6e80831.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d19a9bd9a70813a38bed7ef56fa40398 nmdc:wfrqc-11-m6e80831.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-wp78xt67 +INFO:root:New activity id created for nmdc:omprc-11-wp78xt67 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jeqns438.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfmgas-11-jeqns438.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:926e593ace590c6f77b326b356899ce8 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfmgas-11-jeqns438.1/nmdc_wfmgas-11-jeqns438.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:926e593ace590c6f77b326b356899ce8 nmdc:dobj-11-835evv77 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jeqns438.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:67404ebd257f1aa49ca7c28eeb6ad154 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfmgas-11-jeqns438.1/nmdc_wfmgas-11-jeqns438.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:67404ebd257f1aa49ca7c28eeb6ad154 nmdc:dobj-11-qpw9zq50 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jeqns438.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1c3eb82ea5e5a99e7ce59b3ddb32b93 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfmgas-11-jeqns438.1/nmdc_wfmgas-11-jeqns438.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1c3eb82ea5e5a99e7ce59b3ddb32b93 nmdc:dobj-11-2h8vv836 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jeqns438.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:69e05886d5029a433750613caa23496e +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfmgas-11-jeqns438.1/nmdc_wfmgas-11-jeqns438.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:69e05886d5029a433750613caa23496e nmdc:dobj-11-7wd27215 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jeqns438.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22355f2090b78e583bf4820d73960914 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfmgas-11-jeqns438.1/nmdc_wfmgas-11-jeqns438.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22355f2090b78e583bf4820d73960914 nmdc:dobj-11-jyqxex17 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jeqns438.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d19a9bd9a70813a38bed7ef56fa40398 nmdc:wfmgas-11-jeqns438.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-wp78xt67 +INFO:root:New activity id created for nmdc:omprc-11-wp78xt67 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-aav9r487.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51e147e014ca89235869b2b6da12d559 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1/nmdc_wfrbt-11-aav9r487.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e147e014ca89235869b2b6da12d559 nmdc:dobj-11-basct386 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aav9r487.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5a6f79c27f92b960eca4ccebed18906 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1/nmdc_wfrbt-11-aav9r487.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5a6f79c27f92b960eca4ccebed18906 nmdc:dobj-11-j2gzkv24 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aav9r487.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:04255fc5ef3a98a320a6d3f9c5e5352c +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1/nmdc_wfrbt-11-aav9r487.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04255fc5ef3a98a320a6d3f9c5e5352c nmdc:dobj-11-r7e6q990 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aav9r487.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d637402398d4c21ae52bb89984b61ae8 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1/nmdc_wfrbt-11-aav9r487.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d637402398d4c21ae52bb89984b61ae8 nmdc:dobj-11-qffty668 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aav9r487.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:942f6291c99f405327412d149c2f7d83 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1/nmdc_wfrbt-11-aav9r487.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:942f6291c99f405327412d149c2f7d83 nmdc:dobj-11-42cn3b18 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aav9r487.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e684ba3782174db2aa987c3cd363915b +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1/nmdc_wfrbt-11-aav9r487.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e684ba3782174db2aa987c3cd363915b nmdc:dobj-11-9cazzh90 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aav9r487.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29280e943b61769beccedd20627c21f9 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1/nmdc_wfrbt-11-aav9r487.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29280e943b61769beccedd20627c21f9 nmdc:dobj-11-yy684d89 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aav9r487.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26725e1d22c2ebb05211b8388e243946 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wp78xt67/nmdc:wfrbt-11-aav9r487.1/nmdc_wfrbt-11-aav9r487.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26725e1d22c2ebb05211b8388e243946 nmdc:dobj-11-1c703c39 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-wp78xt67 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aav9r487.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e29dd24388be81e18a2ea75ddffb79ea 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nmdc:omprc-11-d33tzp14 +INFO:root:New activity id created for nmdc:omprc-11-d33tzp14 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8cjav473.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrqc-11-8cjav473.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7f9e112d876e3f20dc10433181efc764 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrqc-11-8cjav473.1/nmdc_wfrqc-11-8cjav473.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f9e112d876e3f20dc10433181efc764 nmdc:dobj-11-ed8h9933 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8cjav473.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9246b17b120db751164674c2b799e92 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrqc-11-8cjav473.1/nmdc_wfrqc-11-8cjav473.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9246b17b120db751164674c2b799e92 nmdc:dobj-11-naxkeh47 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8cjav473.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:356644fc47cdd7591fd8aa27bc4cc6af nmdc:wfrqc-11-8cjav473.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-d33tzp14 +INFO:root:New activity id created for nmdc:omprc-11-d33tzp14 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hayq5s75.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfmgas-11-hayq5s75.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96500b953047ace9969f1f7b2765a6bf +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfmgas-11-hayq5s75.1/nmdc_wfmgas-11-hayq5s75.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96500b953047ace9969f1f7b2765a6bf nmdc:dobj-11-fsqx9559 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hayq5s75.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f24425a560ceb08692d9cb168b057076 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfmgas-11-hayq5s75.1/nmdc_wfmgas-11-hayq5s75.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f24425a560ceb08692d9cb168b057076 nmdc:dobj-11-tw5s6729 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hayq5s75.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a7b0d7fc4619a97a8c4ec603f932c72 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfmgas-11-hayq5s75.1/nmdc_wfmgas-11-hayq5s75.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a7b0d7fc4619a97a8c4ec603f932c72 nmdc:dobj-11-hvrexn66 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hayq5s75.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b37c41777384f149bec57d60689fdd3 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfmgas-11-hayq5s75.1/nmdc_wfmgas-11-hayq5s75.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b37c41777384f149bec57d60689fdd3 nmdc:dobj-11-2xrg5s65 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrbt-11-379cke61.1/nmdc_wfrbt-11-379cke61.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:932ec2318c0f69b7e72d302f079d5778 nmdc:dobj-11-dd1bgf28 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-379cke61.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f104025901dfc0986db162ea75f9a69e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrbt-11-379cke61.1/nmdc_wfrbt-11-379cke61.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f104025901dfc0986db162ea75f9a69e nmdc:dobj-11-2r0nvm26 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-379cke61.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6bd879a9386e55655013d72b44a21417 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrbt-11-379cke61.1/nmdc_wfrbt-11-379cke61.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6bd879a9386e55655013d72b44a21417 nmdc:dobj-11-09za0f42 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-379cke61.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f3a7312e2735d5a44f1d0f328c86fe8 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrbt-11-379cke61.1/nmdc_wfrbt-11-379cke61.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f3a7312e2735d5a44f1d0f328c86fe8 nmdc:dobj-11-3y4p2k53 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-379cke61.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b46557143429f0eef97426c0e3e990ca +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrbt-11-379cke61.1/nmdc_wfrbt-11-379cke61.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b46557143429f0eef97426c0e3e990ca nmdc:dobj-11-53jg6z16 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-379cke61.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9be65196a7c0cd298eb9cb161bdeb969 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrbt-11-379cke61.1/nmdc_wfrbt-11-379cke61.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9be65196a7c0cd298eb9cb161bdeb969 nmdc:dobj-11-atm6t503 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-379cke61.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:049ef839b931c8bac59425f8af3a3e9f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrbt-11-379cke61.1/nmdc_wfrbt-11-379cke61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:049ef839b931c8bac59425f8af3a3e9f nmdc:dobj-11-r0sjvc25 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-379cke61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:528effc91669d9935ec80237cbb4aa2b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d33tzp14/nmdc:wfrbt-11-379cke61.1/nmdc_wfrbt-11-379cke61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:528effc91669d9935ec80237cbb4aa2b nmdc:dobj-11-qrt37r75 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-d33tzp14 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-379cke61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:356644fc47cdd7591fd8aa27bc4cc6af nmdc:wfrbt-11-379cke61.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-d33tzp14 +INFO:root:omics_processing_id: nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c2a284bef9e01f300addbc05d5edf32 nmdc:dobj-11-e08jzb24 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-epze3h17 +INFO:root:New activity id created for nmdc:omprc-11-epze3h17 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g8061n83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrqc-11-g8061n83.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07e7fffbb9eaeac4619c5f7f10d58c74 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrqc-11-g8061n83.1/nmdc_wfrqc-11-g8061n83.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07e7fffbb9eaeac4619c5f7f10d58c74 nmdc:dobj-11-3tc5c565 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g8061n83.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0af065f3d3e4c9de37a4e4550c9fcde4 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrqc-11-g8061n83.1/nmdc_wfrqc-11-g8061n83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0af065f3d3e4c9de37a4e4550c9fcde4 nmdc:dobj-11-6h4v6n75 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g8061n83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e322a0db84bcf87f0e39888acce5802f nmdc:wfrqc-11-g8061n83.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-epze3h17 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfmgas-11-txmhd593.1/nmdc_wfmgas-11-txmhd593.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ab6ff970ef27561e3e5c1b7eba35f4e nmdc:dobj-11-zk7xjy12 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-txmhd593.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a50403fe2ccb66332011239a0eb3b03a +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfmgas-11-txmhd593.1/nmdc_wfmgas-11-txmhd593.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a50403fe2ccb66332011239a0eb3b03a nmdc:dobj-11-bdwdmd93 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-txmhd593.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a23e2f8dd3ad1133f6c8e284a4917d08 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfmgas-11-txmhd593.1/nmdc_wfmgas-11-txmhd593.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a23e2f8dd3ad1133f6c8e284a4917d08 nmdc:dobj-11-9my5n332 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-txmhd593.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e244d7bdd697d639169de47e7a73f90 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfmgas-11-txmhd593.1/nmdc_wfmgas-11-txmhd593.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e244d7bdd697d639169de47e7a73f90 nmdc:dobj-11-z3p0ff30 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrbt-11-7v894k30.1/nmdc_wfrbt-11-7v894k30.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b4a89ead0594d214d71806f3b1752bf8 nmdc:dobj-11-554ghz11 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7v894k30.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a8e80c794da6225a5ed1ea146715c4b +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrbt-11-7v894k30.1/nmdc_wfrbt-11-7v894k30.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a8e80c794da6225a5ed1ea146715c4b nmdc:dobj-11-abxqwm96 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7v894k30.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:496760ece43c25f731294700d3f5d1d7 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrbt-11-7v894k30.1/nmdc_wfrbt-11-7v894k30.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:496760ece43c25f731294700d3f5d1d7 nmdc:dobj-11-fdek3c24 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7v894k30.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f587259a6eadadb999651f4d775444cd +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrbt-11-7v894k30.1/nmdc_wfrbt-11-7v894k30.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f587259a6eadadb999651f4d775444cd nmdc:dobj-11-sg29at94 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7v894k30.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3f5898150d472293ca2742b3ff3e8e86 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrbt-11-7v894k30.1/nmdc_wfrbt-11-7v894k30.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3f5898150d472293ca2742b3ff3e8e86 nmdc:dobj-11-twtaf519 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7v894k30.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d7bf56f33a70c3f2a6c18b6b175663f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrbt-11-7v894k30.1/nmdc_wfrbt-11-7v894k30.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d7bf56f33a70c3f2a6c18b6b175663f nmdc:dobj-11-kt65zd26 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7v894k30.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ee13c890436302d44f6c31d467cedf0 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epze3h17/nmdc:wfrbt-11-7v894k30.1/nmdc_wfrbt-11-7v894k30.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ee13c890436302d44f6c31d467cedf0 nmdc:dobj-11-np2b9j49 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-epze3h17 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7v894k30.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e322a0db84bcf87f0e39888acce5802f nmdc:wfrbt-11-7v894k30.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-epze3h17 +INFO:root:omics_processing_id: nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de403b44749af67c65b37e174610e0ec nmdc:dobj-11-hbjr6h48 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-wwkz5912 +INFO:root:New activity id created for nmdc:omprc-11-wwkz5912 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3ner0d59.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrqc-11-3ner0d59.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3ab2d081a5a00289249390e7b869f42 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrqc-11-3ner0d59.1/nmdc_wfrqc-11-3ner0d59.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b3ab2d081a5a00289249390e7b869f42 nmdc:dobj-11-rvbn7b26 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3ner0d59.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:028031802584e373609fa5e6413cf451 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrqc-11-3ner0d59.1/nmdc_wfrqc-11-3ner0d59.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:028031802584e373609fa5e6413cf451 nmdc:dobj-11-25fxmg81 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3ner0d59.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c9a7117bff3573d05d37c8d179fda3a4 nmdc:wfrqc-11-3ner0d59.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-wwkz5912 +INFO:root:New activity id created for nmdc:omprc-11-wwkz5912 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2mxe2b84.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfmgas-11-2mxe2b84.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02ecebfe80c471dc68e939c6765352e1 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfmgas-11-2mxe2b84.1/nmdc_wfmgas-11-2mxe2b84.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02ecebfe80c471dc68e939c6765352e1 nmdc:dobj-11-9q2vzr87 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-wwkz5912 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrbt-11-5pfpew12.1/nmdc_wfrbt-11-5pfpew12.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56ed058a0f17ec0b4435a46f74de5289 nmdc:dobj-11-y1xt2c05 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5pfpew12.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f6a66f1798435741db41f8f130c26fa1 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrbt-11-5pfpew12.1/nmdc_wfrbt-11-5pfpew12.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f6a66f1798435741db41f8f130c26fa1 nmdc:dobj-11-mmt8qg38 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5pfpew12.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5308b76ceff5219bf1c8b1315afc58a7 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrbt-11-5pfpew12.1/nmdc_wfrbt-11-5pfpew12.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5308b76ceff5219bf1c8b1315afc58a7 nmdc:dobj-11-xfz7m756 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5pfpew12.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4323412c85263f7144ea49ecd38ca5c4 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrbt-11-5pfpew12.1/nmdc_wfrbt-11-5pfpew12.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4323412c85263f7144ea49ecd38ca5c4 nmdc:dobj-11-t4w01b13 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5pfpew12.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:81aac68c4a25a462cd7f459a31634fa7 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrbt-11-5pfpew12.1/nmdc_wfrbt-11-5pfpew12.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81aac68c4a25a462cd7f459a31634fa7 nmdc:dobj-11-6a0sc863 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5pfpew12.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2249dd799883a0cd411a169d13bc5d52 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wwkz5912/nmdc:wfrbt-11-5pfpew12.1/nmdc_wfrbt-11-5pfpew12.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2249dd799883a0cd411a169d13bc5d52 nmdc:dobj-11-8zzbww06 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-wwkz5912 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5pfpew12.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c9a7117bff3573d05d37c8d179fda3a4 nmdc:wfrbt-11-5pfpew12.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-wwkz5912 +INFO:root:omics_processing_id: nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e1789bd5142ace6c8d6452cb6719384e nmdc:dobj-11-nwy4jx41 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-s7p7xq39 +INFO:root:New activity id created for nmdc:omprc-11-s7p7xq39 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zfzp3y74.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrqc-11-zfzp3y74.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b8871cd4c2cbf4689649f6d6e2638d3 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrqc-11-zfzp3y74.1/nmdc_wfrqc-11-zfzp3y74.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b8871cd4c2cbf4689649f6d6e2638d3 nmdc:dobj-11-5j71re02 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zfzp3y74.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:05514ee4c6fdd80c4c004e240149a12e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrqc-11-zfzp3y74.1/nmdc_wfrqc-11-zfzp3y74.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:05514ee4c6fdd80c4c004e240149a12e nmdc:dobj-11-sbyfps60 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zfzp3y74.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fc4e91a1080974f468af962d800a9e75 nmdc:wfrqc-11-zfzp3y74.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-s7p7xq39 +INFO:root:New activity id created for nmdc:omprc-11-s7p7xq39 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vdbze074.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfmgas-11-vdbze074.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f4e2a316f53268c0ddf7c147351b3f9 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfmgas-11-vdbze074.1/nmdc_wfmgas-11-vdbze074.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f4e2a316f53268c0ddf7c147351b3f9 nmdc:dobj-11-a8872t12 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vdbze074.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94fae9a291ea59828cf3775d719bc014 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfmgas-11-vdbze074.1/nmdc_wfmgas-11-vdbze074.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94fae9a291ea59828cf3775d719bc014 nmdc:dobj-11-rxea0408 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vdbze074.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71c3a07d4605985ce5f5140517531c65 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfmgas-11-vdbze074.1/nmdc_wfmgas-11-vdbze074.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71c3a07d4605985ce5f5140517531c65 nmdc:dobj-11-bp1v6w26 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vdbze074.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88df4abb6c77d661bf1a1bb762543c85 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfmgas-11-vdbze074.1/nmdc_wfmgas-11-vdbze074.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88df4abb6c77d661bf1a1bb762543c85 nmdc:dobj-11-1q77je74 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrbt-11-kt7yqd96.1/nmdc_wfrbt-11-kt7yqd96.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74feaa69884a42487cb8975cdfb9ac7e nmdc:dobj-11-p6txr247 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt7yqd96.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29c0af7c353e0f94322bcad90441c9cd +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrbt-11-kt7yqd96.1/nmdc_wfrbt-11-kt7yqd96.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29c0af7c353e0f94322bcad90441c9cd nmdc:dobj-11-f2azb046 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-s7p7xq39 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrbt-11-kt7yqd96.1/nmdc_wfrbt-11-kt7yqd96.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7fa03f24180cdaf75bba0fcf79ee7be nmdc:dobj-11-kg0m7w02 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt7yqd96.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82a57edec81b2efac4146c6a58167d99 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrbt-11-kt7yqd96.1/nmdc_wfrbt-11-kt7yqd96.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82a57edec81b2efac4146c6a58167d99 nmdc:dobj-11-gwgsdy16 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt7yqd96.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a81343aa299f14b83e3d7414082f7f91 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrbt-11-kt7yqd96.1/nmdc_wfrbt-11-kt7yqd96.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a81343aa299f14b83e3d7414082f7f91 nmdc:dobj-11-cra0z309 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-s7p7xq39 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt7yqd96.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:76a91a8c2e0ba0e5cd2984d10807fd24 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s7p7xq39/nmdc:wfrbt-11-kt7yqd96.1/nmdc_wfrbt-11-kt7yqd96.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject 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nmdc:dobj-11-yt8js843 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1k24vz29.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ce48813e3c281a0ceb0927d3e56322d0 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfrqc-11-1k24vz29.1/nmdc_wfrqc-11-1k24vz29.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce48813e3c281a0ceb0927d3e56322d0 nmdc:dobj-11-d1hvjk58 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1k24vz29.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a9daa35f673c2c756018165216d4c91b nmdc:wfrqc-11-1k24vz29.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-qtrrwm54 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfmgas-11-8y7cyk50.1/nmdc_wfmgas-11-8y7cyk50.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71295cf25672aa005e026f99a2b1b4fe nmdc:dobj-11-c91e7t51 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8y7cyk50.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:05a0fae5a13c4d6e57cc6498d20dfb87 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfmgas-11-8y7cyk50.1/nmdc_wfmgas-11-8y7cyk50.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:05a0fae5a13c4d6e57cc6498d20dfb87 nmdc:dobj-11-8csa2q78 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8y7cyk50.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:af15c645ced157d5ede65665d3bfb496 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfmgas-11-8y7cyk50.1/nmdc_wfmgas-11-8y7cyk50.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:af15c645ced157d5ede65665d3bfb496 nmdc:dobj-11-6ava8w07 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8y7cyk50.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c85dcbdda23019f3ece2f2825e8aa368 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfmgas-11-8y7cyk50.1/nmdc_wfmgas-11-8y7cyk50.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c85dcbdda23019f3ece2f2825e8aa368 nmdc:dobj-11-vez56y12 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfrbt-11-pgmvjf16.1/nmdc_wfrbt-11-pgmvjf16.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ffd2bdf6bc65ffddb1373ae858d4479 nmdc:dobj-11-70zmby47 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pgmvjf16.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:745edae1a91f14959c64b3509e66b7bb +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfrbt-11-pgmvjf16.1/nmdc_wfrbt-11-pgmvjf16.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:745edae1a91f14959c64b3509e66b7bb nmdc:dobj-11-rqa2wn09 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pgmvjf16.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e2b3f0bf349a22003d15abd96ba15f8 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfrbt-11-pgmvjf16.1/nmdc_wfrbt-11-pgmvjf16.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e2b3f0bf349a22003d15abd96ba15f8 nmdc:dobj-11-stxgxq72 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pgmvjf16.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b09b9b191a4b1326918ffa7c7910707 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfrbt-11-pgmvjf16.1/nmdc_wfrbt-11-pgmvjf16.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b09b9b191a4b1326918ffa7c7910707 nmdc:dobj-11-etx3m135 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pgmvjf16.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d0113c93ea162ec89845c2bb05fa492 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qtrrwm54/nmdc:wfrbt-11-pgmvjf16.1/nmdc_wfrbt-11-pgmvjf16.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d0113c93ea162ec89845c2bb05fa492 nmdc:dobj-11-4mxbx836 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pgmvjf16.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: 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nmdc:omprc-11-qtrrwm54 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pgmvjf16.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a9daa35f673c2c756018165216d4c91b nmdc:wfrbt-11-pgmvjf16.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-qtrrwm54 +INFO:root:omics_processing_id: nmdc:omprc-11-ha6ktt27 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa5384ed7b4b09b61895fd8967ec2e84 nmdc:dobj-11-8n5byw45 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ha6ktt27 +INFO:root:New activity id created for nmdc:omprc-11-ha6ktt27 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vdp10955.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ha6ktt27/nmdc:wfrqc-11-vdp10955.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b8bf03637ad6f8cce9c2bb9728dcfd28 +INFO:root:New file path computed 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nmdc:8948a2f1e2b60d43150a5f6fa02bf8a9 nmdc:dobj-11-3rnkk378 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ha6ktt27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-weejhs27.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cca600f556a3e23650d9dd0ec262a7ac +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ha6ktt27/nmdc:wfmgas-11-weejhs27.1/nmdc_wfmgas-11-weejhs27.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cca600f556a3e23650d9dd0ec262a7ac nmdc:dobj-11-38y28888 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ha6ktt27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-weejhs27.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fc31661a28c2c1efe196c202222718d +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ha6ktt27/nmdc:wfmgas-11-weejhs27.1/nmdc_wfmgas-11-weejhs27.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fc31661a28c2c1efe196c202222718d nmdc:dobj-11-sstj4909 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ha6ktt27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-weejhs27.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:75f3ba673f797a151ac89a4d604340bf nmdc:wfmgas-11-weejhs27.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ha6ktt27 +INFO:root:New activity id created for nmdc:omprc-11-ha6ktt27 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jqb36c64.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ha6ktt27/nmdc:wfrbt-11-jqb36c64.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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report for nmdc:omprc-11-ha6ktt27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jqb36c64.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d3cbfe0639884ada5096789e6da2b6d +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ha6ktt27/nmdc:wfrbt-11-jqb36c64.1/nmdc_wfrbt-11-jqb36c64.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d3cbfe0639884ada5096789e6da2b6d nmdc:dobj-11-vjsw4j95 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ha6ktt27 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jqb36c64.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a8bbd4cc3f7707380eba62bcf3996a4 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfmgas-11-ghb74g80.1/nmdc_wfmgas-11-ghb74g80.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0671cb1e231fd8206421af00b74c890c nmdc:dobj-11-qhwxz073 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ghb74g80.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d0996c84eaa34b57585559e9d701aec +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfmgas-11-ghb74g80.1/nmdc_wfmgas-11-ghb74g80.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d0996c84eaa34b57585559e9d701aec nmdc:dobj-11-bzp1y565 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ghb74g80.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:572fa838e1ae0e38c8497bca74c8cd40 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfmgas-11-ghb74g80.1/nmdc_wfmgas-11-ghb74g80.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:572fa838e1ae0e38c8497bca74c8cd40 nmdc:dobj-11-tfwgz196 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ghb74g80.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c498eca4a4d350cb026c6b7fda4fb50 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfmgas-11-ghb74g80.1/nmdc_wfmgas-11-ghb74g80.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c498eca4a4d350cb026c6b7fda4fb50 nmdc:dobj-11-84a62t51 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfrbt-11-wstn1m87.1/nmdc_wfrbt-11-wstn1m87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afe8ea175ab6f27e06031fe2ec5ce047 nmdc:dobj-11-fyddtw29 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wstn1m87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:76a5ddc0598168c35292d915798a1070 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfrbt-11-wstn1m87.1/nmdc_wfrbt-11-wstn1m87.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:76a5ddc0598168c35292d915798a1070 nmdc:dobj-11-njzavt97 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-y7skb569 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfrbt-11-wstn1m87.1/nmdc_wfrbt-11-wstn1m87.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1cbd9f2f4186d2dfee12cb3bedcb00c nmdc:dobj-11-vt588t54 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wstn1m87.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbc5a29bd882213203a5fc2bcc72be07 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfrbt-11-wstn1m87.1/nmdc_wfrbt-11-wstn1m87.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbc5a29bd882213203a5fc2bcc72be07 nmdc:dobj-11-51kaqc85 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wstn1m87.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12d8ea07ee01ee453502d10260b5cbf2 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfrbt-11-wstn1m87.1/nmdc_wfrbt-11-wstn1m87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12d8ea07ee01ee453502d10260b5cbf2 nmdc:dobj-11-dyb44p05 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wstn1m87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4559a4f6ede84470e15dbee9754568aa +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfrbt-11-wstn1m87.1/nmdc_wfrbt-11-wstn1m87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4559a4f6ede84470e15dbee9754568aa nmdc:dobj-11-y3rr0f12 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wstn1m87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:830f2636f78b3e332fd515c3199fd28b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y7skb569/nmdc:wfrbt-11-wstn1m87.1/nmdc_wfrbt-11-wstn1m87.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:830f2636f78b3e332fd515c3199fd28b nmdc:dobj-11-hbxrrv48 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-y7skb569 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wstn1m87.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3380650f67005a706f6f112ebd633b4 nmdc:wfrbt-11-wstn1m87.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-y7skb569 +INFO:root:omics_processing_id: nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1fe659df2351222a9634b74559ea1a02 nmdc:dobj-11-k41awm94 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-49x57s66 +INFO:root:New activity id created for nmdc:omprc-11-49x57s66 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rvvdn584.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrqc-11-rvvdn584.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bf96c472d7d3973ab8fc9f35d082f64d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrqc-11-rvvdn584.1/nmdc_wfrqc-11-rvvdn584.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf96c472d7d3973ab8fc9f35d082f64d nmdc:dobj-11-c416g069 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rvvdn584.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72cee075ff03249d5e15aa8288ada399 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrqc-11-rvvdn584.1/nmdc_wfrqc-11-rvvdn584.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72cee075ff03249d5e15aa8288ada399 nmdc:dobj-11-9406aw04 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rvvdn584.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:37516b6617cd4395195dfbccbb45297d nmdc:wfrqc-11-rvvdn584.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-49x57s66 +INFO:root:New activity id created for nmdc:omprc-11-49x57s66 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-geyqte51.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfmgas-11-geyqte51.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d7f8d8cda952f07da7817572d84a7e7 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfmgas-11-geyqte51.1/nmdc_wfmgas-11-geyqte51.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d7f8d8cda952f07da7817572d84a7e7 nmdc:dobj-11-4v2sqx92 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-geyqte51.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45aa1b1194a436b932867c2315e90766 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfmgas-11-geyqte51.1/nmdc_wfmgas-11-geyqte51.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45aa1b1194a436b932867c2315e90766 nmdc:dobj-11-8zypgq16 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-geyqte51.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:378b0ce20e01c903884132b65fc5fac7 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfmgas-11-geyqte51.1/nmdc_wfmgas-11-geyqte51.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:378b0ce20e01c903884132b65fc5fac7 nmdc:dobj-11-3xch4e69 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-geyqte51.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ed0f63e6e55eb4a6d8cd9bc89e9ebc3 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfmgas-11-geyqte51.1/nmdc_wfmgas-11-geyqte51.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ed0f63e6e55eb4a6d8cd9bc89e9ebc3 nmdc:dobj-11-e93nxr35 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-geyqte51.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f553020c97f3f0631c8f2b65837dacc +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfmgas-11-geyqte51.1/nmdc_wfmgas-11-geyqte51.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f553020c97f3f0631c8f2b65837dacc nmdc:dobj-11-p9z3yx35 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f99c3d0166dbc27127624be8490cd20 nmdc:dobj-11-msjsev18 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86135424e658797921abae85320b27e2 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrbt-11-hhqcvw08.1/nmdc_wfrbt-11-hhqcvw08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86135424e658797921abae85320b27e2 nmdc:dobj-11-ktp17680 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ebf495065278db17f2bf5022e8b7ef4 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrbt-11-hhqcvw08.1/nmdc_wfrbt-11-hhqcvw08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ebf495065278db17f2bf5022e8b7ef4 nmdc:dobj-11-nsm1hq58 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d40c288eb463731fd020681a8ecf75ac +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrbt-11-hhqcvw08.1/nmdc_wfrbt-11-hhqcvw08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d40c288eb463731fd020681a8ecf75ac nmdc:dobj-11-qmsxyy57 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:493517f3c831523d9dcb14ff7fe71dd9 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrbt-11-hhqcvw08.1/nmdc_wfrbt-11-hhqcvw08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:493517f3c831523d9dcb14ff7fe71dd9 nmdc:dobj-11-7mh4cm02 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:28a98f6d277371628c4b9e35066389e8 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrbt-11-hhqcvw08.1/nmdc_wfrbt-11-hhqcvw08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28a98f6d277371628c4b9e35066389e8 nmdc:dobj-11-2e1nfn51 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a34f3e4ec75ac0d6a390a49c54677dc +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrbt-11-hhqcvw08.1/nmdc_wfrbt-11-hhqcvw08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a34f3e4ec75ac0d6a390a49c54677dc nmdc:dobj-11-t02mm149 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:08186cbc0a5b4f77c5ce851da6ead8e9 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrbt-11-hhqcvw08.1/nmdc_wfrbt-11-hhqcvw08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08186cbc0a5b4f77c5ce851da6ead8e9 nmdc:dobj-11-vh1rzh77 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7409ed18f5d3dc8452b82a1e27f2391f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49x57s66/nmdc:wfrbt-11-hhqcvw08.1/nmdc_wfrbt-11-hhqcvw08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7409ed18f5d3dc8452b82a1e27f2391f nmdc:dobj-11-tm1vx162 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-49x57s66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hhqcvw08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:37516b6617cd4395195dfbccbb45297d nmdc:wfrbt-11-hhqcvw08.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-49x57s66 +INFO:root:omics_processing_id: nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cbb0fed50849dfea6c870537aee0518 nmdc:dobj-11-e453qg63 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-edc20563 +INFO:root:New activity id created for nmdc:omprc-11-edc20563 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dbnvzh16.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrqc-11-dbnvzh16.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a292993781fb3e9bb39d09b9d33cc3b7 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrqc-11-dbnvzh16.1/nmdc_wfrqc-11-dbnvzh16.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a292993781fb3e9bb39d09b9d33cc3b7 nmdc:dobj-11-c8pqb603 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dbnvzh16.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4cffabdea6d98998b95c645f496b32ce +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrqc-11-dbnvzh16.1/nmdc_wfrqc-11-dbnvzh16.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4cffabdea6d98998b95c645f496b32ce nmdc:dobj-11-mzab5654 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dbnvzh16.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3213458d0d410972d9ccf896cd15798f nmdc:wfrqc-11-dbnvzh16.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-edc20563 +INFO:root:New activity id created for nmdc:omprc-11-edc20563 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-t1etkg49.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfmgas-11-t1etkg49.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:747cab91283faffe19ee52ecad6eba1b +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfmgas-11-t1etkg49.1/nmdc_wfmgas-11-t1etkg49.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:747cab91283faffe19ee52ecad6eba1b nmdc:dobj-11-5pdqv809 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-edc20563 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfmgas-11-t1etkg49.1/nmdc_wfmgas-11-t1etkg49.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ffc49aa9ec8b5327192099c72f1564c3 nmdc:dobj-11-xwvfyn24 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t1etkg49.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3213458d0d410972d9ccf896cd15798f nmdc:wfmgas-11-t1etkg49.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-edc20563 +INFO:root:New activity id created for nmdc:omprc-11-edc20563 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-frst6m41.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrbt-11-frst6m41.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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report for nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-frst6m41.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:321775529dc101530645ff46b261d7bc +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrbt-11-frst6m41.1/nmdc_wfrbt-11-frst6m41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:321775529dc101530645ff46b261d7bc nmdc:dobj-11-jp9hwz96 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-frst6m41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c56a50ddd7dbd56e13094fa3740890f +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrbt-11-frst6m41.1/nmdc_wfrbt-11-frst6m41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c56a50ddd7dbd56e13094fa3740890f nmdc:dobj-11-v67f0f92 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-frst6m41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e4929e11f275e69b84fadbb3b779430 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrbt-11-frst6m41.1/nmdc_wfrbt-11-frst6m41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e4929e11f275e69b84fadbb3b779430 nmdc:dobj-11-tj75xd70 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-frst6m41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f07acf50f8cec101790731b1bb84eabb +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrbt-11-frst6m41.1/nmdc_wfrbt-11-frst6m41.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f07acf50f8cec101790731b1bb84eabb nmdc:dobj-11-1h7seg69 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-edc20563 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-frst6m41.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7f41f4d136f8c22aa667d54db3295b4 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edc20563/nmdc:wfrbt-11-frst6m41.1/nmdc_wfrbt-11-frst6m41.1_kraken2_classification.tsv 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfmgas-11-6ycx6x22.1/nmdc_wfmgas-11-6ycx6x22.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9877d229a243670968a3f826b8cc74b9 nmdc:dobj-11-bw8xya50 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-atg8yc28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ycx6x22.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:893bbf06a51f6543f79cc96bdd3a1de3 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfmgas-11-6ycx6x22.1/nmdc_wfmgas-11-6ycx6x22.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:893bbf06a51f6543f79cc96bdd3a1de3 nmdc:dobj-11-661gpt51 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-atg8yc28 +INFO:nmdc_automation.re_iding.base:new_filename: 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfrbt-11-16kgcr19.1/nmdc_wfrbt-11-16kgcr19.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a655be17142b78c0e50b8949eb399535 nmdc:dobj-11-0dvpv986 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-atg8yc28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-16kgcr19.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1fa308af4bb68ef5aee19c5b1b3b58c +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfrbt-11-16kgcr19.1/nmdc_wfrbt-11-16kgcr19.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1fa308af4bb68ef5aee19c5b1b3b58c nmdc:dobj-11-e4askb78 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-atg8yc28 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfrbt-11-16kgcr19.1/nmdc_wfrbt-11-16kgcr19.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f1ec69e73e3c3ea92ecef462fe05822 nmdc:dobj-11-7gr88h03 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-atg8yc28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-16kgcr19.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:853f3b73417a9efb094fc5a63fdb713d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfrbt-11-16kgcr19.1/nmdc_wfrbt-11-16kgcr19.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:853f3b73417a9efb094fc5a63fdb713d nmdc:dobj-11-337ghc60 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-atg8yc28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-16kgcr19.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6f06e9629d96ecf48f7ce1d69e993c3 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfrbt-11-16kgcr19.1/nmdc_wfrbt-11-16kgcr19.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6f06e9629d96ecf48f7ce1d69e993c3 nmdc:dobj-11-g3d2c530 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-atg8yc28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-16kgcr19.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1bf435e0c6f9299146ebc8f07b707434 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfrbt-11-16kgcr19.1/nmdc_wfrbt-11-16kgcr19.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bf435e0c6f9299146ebc8f07b707434 nmdc:dobj-11-sz8jqd03 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-atg8yc28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-16kgcr19.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d0081f23160bedbd793bc714298451e +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-atg8yc28/nmdc:wfrbt-11-16kgcr19.1/nmdc_wfrbt-11-16kgcr19.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d0081f23160bedbd793bc714298451e nmdc:dobj-11-x2243863 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-atg8yc28 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-16kgcr19.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:81d3c6d09acdd4428b3bec01ccebb110 nmdc:wfrbt-11-16kgcr19.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-atg8yc28 +INFO:root:omics_processing_id: nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bee00bbc8f08d836aecb75a055a618f nmdc:dobj-11-p2qdw231 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a6chj969 +INFO:root:New activity id created for nmdc:omprc-11-a6chj969 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-k9gj0s57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrqc-11-k9gj0s57.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:935fbad3df72e7c4071222ebb72e261f +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrqc-11-k9gj0s57.1/nmdc_wfrqc-11-k9gj0s57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:935fbad3df72e7c4071222ebb72e261f nmdc:dobj-11-bdtkr511 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k9gj0s57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f36fb28e84d70038acd9d017e610ab6 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrqc-11-k9gj0s57.1/nmdc_wfrqc-11-k9gj0s57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f36fb28e84d70038acd9d017e610ab6 nmdc:dobj-11-gzhvjz82 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k9gj0s57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:33758c16adb098e1e9f9431a5031738e nmdc:wfrqc-11-k9gj0s57.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-a6chj969 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfmgas-11-rqr30a26.1/nmdc_wfmgas-11-rqr30a26.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2dcd3027120fd85203adf5eb3e398911 nmdc:dobj-11-nd08jp04 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rqr30a26.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a537f8ba78f6f2f2ca65036a7f51abba +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfmgas-11-rqr30a26.1/nmdc_wfmgas-11-rqr30a26.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a537f8ba78f6f2f2ca65036a7f51abba nmdc:dobj-11-n3f25f34 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rqr30a26.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a955946114ba89bc2c79b2e7fca3f15 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfmgas-11-rqr30a26.1/nmdc_wfmgas-11-rqr30a26.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a955946114ba89bc2c79b2e7fca3f15 nmdc:dobj-11-7rdsa541 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rqr30a26.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1aa40c2095d57c9dbb6d5306c5dbedc +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfmgas-11-rqr30a26.1/nmdc_wfmgas-11-rqr30a26.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1aa40c2095d57c9dbb6d5306c5dbedc nmdc:dobj-11-80xnhk16 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrbt-11-vkvg2j90.1/nmdc_wfrbt-11-vkvg2j90.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f54e533b52a69f1928fbb3f461f7aa2b nmdc:dobj-11-bzm3jc85 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vkvg2j90.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1abf3fce3fe1caeb9f1a57a8a0a7b9d2 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrbt-11-vkvg2j90.1/nmdc_wfrbt-11-vkvg2j90.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1abf3fce3fe1caeb9f1a57a8a0a7b9d2 nmdc:dobj-11-4qcqe621 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vkvg2j90.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45aea22f399ecb6bc963d797f2e04d98 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrbt-11-vkvg2j90.1/nmdc_wfrbt-11-vkvg2j90.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45aea22f399ecb6bc963d797f2e04d98 nmdc:dobj-11-3pxjxr73 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vkvg2j90.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b74b43c1e11090b88458987ae15f3bfc +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrbt-11-vkvg2j90.1/nmdc_wfrbt-11-vkvg2j90.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b74b43c1e11090b88458987ae15f3bfc nmdc:dobj-11-q0w05a74 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vkvg2j90.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d83c96f2b3dfd78419591a1bee554d05 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrbt-11-vkvg2j90.1/nmdc_wfrbt-11-vkvg2j90.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d83c96f2b3dfd78419591a1bee554d05 nmdc:dobj-11-gqvxna23 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vkvg2j90.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7a419fb2fd9c16ec6606cefb5ac402f9 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrbt-11-vkvg2j90.1/nmdc_wfrbt-11-vkvg2j90.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7a419fb2fd9c16ec6606cefb5ac402f9 nmdc:dobj-11-zpg6q579 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vkvg2j90.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:30f1d36e5fdb1e62a464884ccc5e21b6 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a6chj969/nmdc:wfrbt-11-vkvg2j90.1/nmdc_wfrbt-11-vkvg2j90.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:30f1d36e5fdb1e62a464884ccc5e21b6 nmdc:dobj-11-1a350x62 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a6chj969 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vkvg2j90.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:33758c16adb098e1e9f9431a5031738e nmdc:wfrbt-11-vkvg2j90.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a6chj969 +INFO:root:omics_processing_id: nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9873cc631388508c5ed9c9a8e2f55c6c nmdc:dobj-11-k9vvmt83 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-cagh2v58 +INFO:root:New activity id created for nmdc:omprc-11-cagh2v58 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vcb6yv03.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrqc-11-vcb6yv03.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d44e811f823e9bbda3f31906ec6d2fc +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrqc-11-vcb6yv03.1/nmdc_wfrqc-11-vcb6yv03.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d44e811f823e9bbda3f31906ec6d2fc nmdc:dobj-11-wmhbtf90 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcb6yv03.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab1fd3438524619ba3eb55e2a59d4283 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrqc-11-vcb6yv03.1/nmdc_wfrqc-11-vcb6yv03.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab1fd3438524619ba3eb55e2a59d4283 nmdc:dobj-11-0kpq9t59 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcb6yv03.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:f0eb01be2fa845939c28a79a4e441b54 nmdc:wfrqc-11-vcb6yv03.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-cagh2v58 +INFO:root:New activity id created for nmdc:omprc-11-cagh2v58 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-n105bb53.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfmgas-11-n105bb53.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa5165f5429c08bbd538cecbf2334792 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfmgas-11-n105bb53.1/nmdc_wfmgas-11-n105bb53.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa5165f5429c08bbd538cecbf2334792 nmdc:dobj-11-peja1e65 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n105bb53.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c90dd598f7489dbc463ca79bfee7de76 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfmgas-11-n105bb53.1/nmdc_wfmgas-11-n105bb53.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c90dd598f7489dbc463ca79bfee7de76 nmdc:dobj-11-evya1085 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n105bb53.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e925ef5a3e51fa7a9ad83e34749e2182 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfmgas-11-n105bb53.1/nmdc_wfmgas-11-n105bb53.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e925ef5a3e51fa7a9ad83e34749e2182 nmdc:dobj-11-161vnz66 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n105bb53.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ad11ddc903e4bbce7e6553044019594 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfmgas-11-n105bb53.1/nmdc_wfmgas-11-n105bb53.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ad11ddc903e4bbce7e6553044019594 nmdc:dobj-11-trw2d926 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n105bb53.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b99f2d219bf555ec21f33639cee2da03 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfmgas-11-n105bb53.1/nmdc_wfmgas-11-n105bb53.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b99f2d219bf555ec21f33639cee2da03 nmdc:dobj-11-2szds126 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n105bb53.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:f0eb01be2fa845939c28a79a4e441b54 nmdc:wfmgas-11-n105bb53.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-cagh2v58 +INFO:root:New activity id created for nmdc:omprc-11-cagh2v58 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qcwm0r63.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrbt-11-qcwm0r63.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f94fbac5441df8ed2483fdafe7a7ff5a +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrbt-11-qcwm0r63.1/nmdc_wfrbt-11-qcwm0r63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f94fbac5441df8ed2483fdafe7a7ff5a nmdc:dobj-11-4paxrr79 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcwm0r63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bc3ba778badb99fc7497248cc661d4a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrbt-11-qcwm0r63.1/nmdc_wfrbt-11-qcwm0r63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bc3ba778badb99fc7497248cc661d4a nmdc:dobj-11-zknxk374 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcwm0r63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c5dfa2f8aeb6be451c4ba76553c32eec +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrbt-11-qcwm0r63.1/nmdc_wfrbt-11-qcwm0r63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5dfa2f8aeb6be451c4ba76553c32eec nmdc:dobj-11-ytpmyq47 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcwm0r63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75db62c9031a9ce8fb90257d9322ea2d +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrbt-11-qcwm0r63.1/nmdc_wfrbt-11-qcwm0r63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75db62c9031a9ce8fb90257d9322ea2d nmdc:dobj-11-cm2yxj77 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcwm0r63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ba1332675fcca99bb1226b677cd76a7b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrbt-11-qcwm0r63.1/nmdc_wfrbt-11-qcwm0r63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba1332675fcca99bb1226b677cd76a7b nmdc:dobj-11-wqa98z13 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcwm0r63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3433314e8d4d9cbc30a702df944e3b4f +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrbt-11-qcwm0r63.1/nmdc_wfrbt-11-qcwm0r63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3433314e8d4d9cbc30a702df944e3b4f nmdc:dobj-11-bzmm7m12 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-cagh2v58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcwm0r63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3c7b7999d222f662f5475acddbb2c48 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cagh2v58/nmdc:wfrbt-11-qcwm0r63.1/nmdc_wfrbt-11-qcwm0r63.1_kraken2_classification.tsv 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfrqc-11-qrmqqw07.1/nmdc_wfrqc-11-qrmqqw07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0cacb8c42fce1b20c067cb581daad4d nmdc:dobj-11-wrhdcm53 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qrmqqw07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cb5928cbc2c278d55ec9d28ac64bdda4 nmdc:wfrqc-11-qrmqqw07.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-hab7pc48 +INFO:root:New activity id created for nmdc:omprc-11-hab7pc48 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x5wy4427.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfmgas-11-x5wy4427.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4482aa62698c27c52d27e5a832ea93c9 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfmgas-11-x5wy4427.1/nmdc_wfmgas-11-x5wy4427.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4482aa62698c27c52d27e5a832ea93c9 nmdc:dobj-11-r9wfgy58 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x5wy4427.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:569026d3828fb961b6e84082b0288774 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfmgas-11-x5wy4427.1/nmdc_wfmgas-11-x5wy4427.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:569026d3828fb961b6e84082b0288774 nmdc:dobj-11-9zrc6c80 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x5wy4427.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9188c7d31856d296ab906f1a4c1ae8a3 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfmgas-11-x5wy4427.1/nmdc_wfmgas-11-x5wy4427.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9188c7d31856d296ab906f1a4c1ae8a3 nmdc:dobj-11-2jbyr782 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x5wy4427.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c31defa61ed5cf998ef155c18e2438e0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfmgas-11-x5wy4427.1/nmdc_wfmgas-11-x5wy4427.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c31defa61ed5cf998ef155c18e2438e0 nmdc:dobj-11-9qgwys95 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfrbt-11-w9my6986.1/nmdc_wfrbt-11-w9my6986.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2bd56713eb53200af06ecc24e356f02 nmdc:dobj-11-fv3vj455 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w9my6986.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a588c351806ab9619736e8858315c55a +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfrbt-11-w9my6986.1/nmdc_wfrbt-11-w9my6986.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a588c351806ab9619736e8858315c55a nmdc:dobj-11-bbjy8g15 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w9my6986.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c4724d87cc5827d5c8955b733fc5be9 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfrbt-11-w9my6986.1/nmdc_wfrbt-11-w9my6986.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c4724d87cc5827d5c8955b733fc5be9 nmdc:dobj-11-h386dc68 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w9my6986.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9437c15ecdabda0e04eb8efd36a66e3 +INFO:root:New file path computed for Centrifuge Classification Report: 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nmdc_wfrbt-11-w9my6986.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dfed7e464544df0db7a61fdb488ddd1e +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfrbt-11-w9my6986.1/nmdc_wfrbt-11-w9my6986.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfed7e464544df0db7a61fdb488ddd1e nmdc:dobj-11-0m6qx730 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w9my6986.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60a0f750e5ff0e9166bd125047bb1252 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfrbt-11-w9my6986.1/nmdc_wfrbt-11-w9my6986.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60a0f750e5ff0e9166bd125047bb1252 nmdc:dobj-11-yjq78m10 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w9my6986.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9375c83c1aa95317650725bfeca6684d +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hab7pc48/nmdc:wfrbt-11-w9my6986.1/nmdc_wfrbt-11-w9my6986.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9375c83c1aa95317650725bfeca6684d nmdc:dobj-11-7ct35r96 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-hab7pc48 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-w9my6986.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cb5928cbc2c278d55ec9d28ac64bdda4 nmdc:wfrbt-11-w9my6986.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-hab7pc48 +INFO:root:omics_processing_id: nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c50aea4e1dc6d96a81f0e5bc0d61ffa0 nmdc:dobj-11-dms4nr79 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-tqg7h363 +INFO:root:New activity id created for nmdc:omprc-11-tqg7h363 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qmh0q720.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrqc-11-qmh0q720.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de8df953ac1dbf8b6df6f89635fdd583 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrqc-11-qmh0q720.1/nmdc_wfrqc-11-qmh0q720.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de8df953ac1dbf8b6df6f89635fdd583 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfmgas-11-j1atb504.1/nmdc_wfmgas-11-j1atb504.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:862c027bbfca798f3f23dd3435bf2bcb nmdc:dobj-11-eebqqs44 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j1atb504.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c369bdbe9c509bbd9b8883fca2b50b7 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfmgas-11-j1atb504.1/nmdc_wfmgas-11-j1atb504.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c369bdbe9c509bbd9b8883fca2b50b7 nmdc:dobj-11-xvqrwn15 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j1atb504.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9f8731290ac9c7db53803a44f2bf119 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfmgas-11-j1atb504.1/nmdc_wfmgas-11-j1atb504.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9f8731290ac9c7db53803a44f2bf119 nmdc:dobj-11-j2ht2m19 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j1atb504.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d20f1665b02a260b0cde69aa787a99f +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfmgas-11-j1atb504.1/nmdc_wfmgas-11-j1atb504.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d20f1665b02a260b0cde69aa787a99f nmdc:dobj-11-ma1waz32 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrbt-11-10gbgr03.1/nmdc_wfrbt-11-10gbgr03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c01b5639fb7adc880530a3f747c24c6 nmdc:dobj-11-ak67ey94 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10gbgr03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:add263cda7d109795b99c81d3a1cce63 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrbt-11-10gbgr03.1/nmdc_wfrbt-11-10gbgr03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:add263cda7d109795b99c81d3a1cce63 nmdc:dobj-11-13mr4n93 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10gbgr03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b29433340de82fd48cfcdf96a415477 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrbt-11-10gbgr03.1/nmdc_wfrbt-11-10gbgr03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b29433340de82fd48cfcdf96a415477 nmdc:dobj-11-6zfx7f15 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10gbgr03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff3b28f39393584a719f654ef72c4ed3 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrbt-11-10gbgr03.1/nmdc_wfrbt-11-10gbgr03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff3b28f39393584a719f654ef72c4ed3 nmdc:dobj-11-8enpbp28 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10gbgr03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:513dee09a3993b8909cc1474f50646fd +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrbt-11-10gbgr03.1/nmdc_wfrbt-11-10gbgr03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:513dee09a3993b8909cc1474f50646fd nmdc:dobj-11-3z30bg71 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10gbgr03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22152dc67282c812b34edc5c439760d6 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrbt-11-10gbgr03.1/nmdc_wfrbt-11-10gbgr03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22152dc67282c812b34edc5c439760d6 nmdc:dobj-11-entp7367 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10gbgr03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae88126c009639c48172501b928f1465 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tqg7h363/nmdc:wfrbt-11-10gbgr03.1/nmdc_wfrbt-11-10gbgr03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae88126c009639c48172501b928f1465 nmdc:dobj-11-ebzqqk32 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-tqg7h363 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-10gbgr03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:760ddab9b3e58e6307bc302a90e203d6 nmdc:wfrbt-11-10gbgr03.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-tqg7h363 +INFO:root:omics_processing_id: nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06dc2e01a1cfcac71bd9423f5e52ec99 nmdc:dobj-11-bypw3d23 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-k9p35n15 +INFO:root:New activity id created for nmdc:omprc-11-k9p35n15 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ms1kaq80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfrqc-11-ms1kaq80.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c8a07a1b76aa898632d122b3c0bb998 +INFO:root:New file path computed 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nmdc_wfrqc-11-ms1kaq80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2f2727451fb56ba2a0fe6feccb58ddd1 nmdc:wfrqc-11-ms1kaq80.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-k9p35n15 +INFO:root:New activity id created for nmdc:omprc-11-k9p35n15 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0b1xg219.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfmgas-11-0b1xg219.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f417c421a01f25a87d87ac57d51ff2a2 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfmgas-11-0b1xg219.1/nmdc_wfmgas-11-0b1xg219.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f417c421a01f25a87d87ac57d51ff2a2 nmdc:dobj-11-7zrp0709 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-k9p35n15 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nmdc:1c9ade143a421baa05de173f6e32a257 nmdc:dobj-11-4ydy9a59 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0b1xg219.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa553e38082734526e08ce73de417cce +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfmgas-11-0b1xg219.1/nmdc_wfmgas-11-0b1xg219.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa553e38082734526e08ce73de417cce nmdc:dobj-11-hggj2n30 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0b1xg219.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c675648c7a964a10fa4f067fa6a62b4 +INFO:root:New file path computed for Assembly Coverage BAM: 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report for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zs436w68.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0d31bdcf698459ea6ea99aa1d193c60a +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfrbt-11-zs436w68.1/nmdc_wfrbt-11-zs436w68.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d31bdcf698459ea6ea99aa1d193c60a nmdc:dobj-11-nh6qss55 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zs436w68.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4859a295bd190bcafef10644fd89e597 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfrbt-11-zs436w68.1/nmdc_wfrbt-11-zs436w68.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4859a295bd190bcafef10644fd89e597 nmdc:dobj-11-nv2ka658 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zs436w68.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86efaf41cd6aa32547042110418dfc71 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfrbt-11-zs436w68.1/nmdc_wfrbt-11-zs436w68.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86efaf41cd6aa32547042110418dfc71 nmdc:dobj-11-xsngjx41 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zs436w68.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b345b017d3a3a881604219eb97a99552 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfrbt-11-zs436w68.1/nmdc_wfrbt-11-zs436w68.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b345b017d3a3a881604219eb97a99552 nmdc:dobj-11-zjxw4w14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zs436w68.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0a38acc807bed37fc61fe6e8fb314214 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfrbt-11-zs436w68.1/nmdc_wfrbt-11-zs436w68.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a38acc807bed37fc61fe6e8fb314214 nmdc:dobj-11-gexmrc02 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zs436w68.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9d25ff8d322f964bf595ea833eb968cd +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfrbt-11-zs436w68.1/nmdc_wfrbt-11-zs436w68.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d25ff8d322f964bf595ea833eb968cd nmdc:dobj-11-ewm15s41 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zs436w68.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36f551a7713e7c70272f770c1563080f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k9p35n15/nmdc:wfrbt-11-zs436w68.1/nmdc_wfrbt-11-zs436w68.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36f551a7713e7c70272f770c1563080f nmdc:dobj-11-r331wc83 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-k9p35n15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zs436w68.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2f2727451fb56ba2a0fe6feccb58ddd1 nmdc:wfrbt-11-zs436w68.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-k9p35n15 +INFO:root:omics_processing_id: nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d81fe2397138a504ee160e16f207e728 nmdc:dobj-11-70np4b09 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-61e5wm30 +INFO:root:New activity id created for nmdc:omprc-11-61e5wm30 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dxqr8r48.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrqc-11-dxqr8r48.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:447331bccd3fc400ecda2fa4b33e6237 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrqc-11-dxqr8r48.1/nmdc_wfrqc-11-dxqr8r48.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:447331bccd3fc400ecda2fa4b33e6237 nmdc:dobj-11-f6h6jx54 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dxqr8r48.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eaca9428f07a435d5156333c5639e7e7 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrqc-11-dxqr8r48.1/nmdc_wfrqc-11-dxqr8r48.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eaca9428f07a435d5156333c5639e7e7 nmdc:dobj-11-hhze5469 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dxqr8r48.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:87de623d5bb6d7fd5dad1654f96bdb39 nmdc:wfrqc-11-dxqr8r48.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-61e5wm30 +INFO:root:New activity id created for nmdc:omprc-11-61e5wm30 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-s6cb0h22.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfmgas-11-s6cb0h22.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:620434a8c5508336f9bddf5e724ba639 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfmgas-11-s6cb0h22.1/nmdc_wfmgas-11-s6cb0h22.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:620434a8c5508336f9bddf5e724ba639 nmdc:dobj-11-snbz8979 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s6cb0h22.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3849b42933037ac10a32992c814d4c2d +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfmgas-11-s6cb0h22.1/nmdc_wfmgas-11-s6cb0h22.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3849b42933037ac10a32992c814d4c2d nmdc:dobj-11-4ekrz337 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s6cb0h22.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d47e63ebf156d6f0f7af64299f6529f1 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfmgas-11-s6cb0h22.1/nmdc_wfmgas-11-s6cb0h22.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d47e63ebf156d6f0f7af64299f6529f1 nmdc:dobj-11-3rxcac56 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s6cb0h22.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e85a9cfa8c33bc0309156826f6e88ea +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfmgas-11-s6cb0h22.1/nmdc_wfmgas-11-s6cb0h22.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e85a9cfa8c33bc0309156826f6e88ea nmdc:dobj-11-7q8rnb41 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nmdc:omprc-11-61e5wm30 +INFO:root:New activity id created for nmdc:omprc-11-61e5wm30 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-xvv78603.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c7bbe51f9645b8ded5b1a73a53efe405 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1/nmdc_wfrbt-11-xvv78603.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7bbe51f9645b8ded5b1a73a53efe405 nmdc:dobj-11-3hpj0c83 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xvv78603.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa0d0b0101bd2d27feaa0c1fa974f5d1 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1/nmdc_wfrbt-11-xvv78603.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa0d0b0101bd2d27feaa0c1fa974f5d1 nmdc:dobj-11-n97rv556 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xvv78603.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5644baf8bed4857f30c6e9157726a6a2 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1/nmdc_wfrbt-11-xvv78603.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5644baf8bed4857f30c6e9157726a6a2 nmdc:dobj-11-q7z0k348 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-61e5wm30 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1/nmdc_wfrbt-11-xvv78603.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c974c169be52f44d2564cb9ac0f743ef nmdc:dobj-11-bvs1t698 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xvv78603.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:deec1e689a51ef841c93b47462792d63 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1/nmdc_wfrbt-11-xvv78603.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:deec1e689a51ef841c93b47462792d63 nmdc:dobj-11-41z8jp46 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xvv78603.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3d78b56598c3488d77de3878b9a1e9f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1/nmdc_wfrbt-11-xvv78603.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3d78b56598c3488d77de3878b9a1e9f nmdc:dobj-11-yc6qk074 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xvv78603.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a857378c02615bad7a4d20a9cd4c1692 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1/nmdc_wfrbt-11-xvv78603.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a857378c02615bad7a4d20a9cd4c1692 nmdc:dobj-11-q70a6533 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xvv78603.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1da77c7e61983064fcca1a4cf8df9e4c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-61e5wm30/nmdc:wfrbt-11-xvv78603.1/nmdc_wfrbt-11-xvv78603.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1da77c7e61983064fcca1a4cf8df9e4c nmdc:dobj-11-k7hqz510 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-61e5wm30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xvv78603.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:87de623d5bb6d7fd5dad1654f96bdb39 nmdc:wfrbt-11-xvv78603.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-61e5wm30 +INFO:root:omics_processing_id: nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f6607f52667292d99ae74f74a5baec nmdc:dobj-11-r38wq472 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-tc43pg33 +INFO:root:New activity id created for nmdc:omprc-11-tc43pg33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sazdgk80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrqc-11-sazdgk80.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3a4f85490e049984996ac6b2f02fd3a1 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrqc-11-sazdgk80.1/nmdc_wfrqc-11-sazdgk80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a4f85490e049984996ac6b2f02fd3a1 nmdc:dobj-11-m19xtj34 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sazdgk80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:609e9f58e68ecc252e3a99b1cf125ff9 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrqc-11-sazdgk80.1/nmdc_wfrqc-11-sazdgk80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:609e9f58e68ecc252e3a99b1cf125ff9 nmdc:dobj-11-cxmypd22 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sazdgk80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cb9109c10c4a12be7fbe80ae522ff279 nmdc:wfrqc-11-sazdgk80.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-tc43pg33 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfmgas-11-d5x97x17.1/nmdc_wfmgas-11-d5x97x17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84da9803babb00afac6bd41ee70e4b0c nmdc:dobj-11-j5zp6v91 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d5x97x17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6f77f0956c4595801c4d69b5f83330b6 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfmgas-11-d5x97x17.1/nmdc_wfmgas-11-d5x97x17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f77f0956c4595801c4d69b5f83330b6 nmdc:dobj-11-7hg0fj77 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d5x97x17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f158a3bff46fd7e8c35ffebb22e50c8e +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfmgas-11-d5x97x17.1/nmdc_wfmgas-11-d5x97x17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f158a3bff46fd7e8c35ffebb22e50c8e nmdc:dobj-11-8p26sk18 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d5x97x17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4bc95046ea7693d2a61886ce007c60ef +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfmgas-11-d5x97x17.1/nmdc_wfmgas-11-d5x97x17.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4bc95046ea7693d2a61886ce007c60ef nmdc:dobj-11-s40tbb16 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da138fca5d794f58d79d56ab5072544e nmdc:dobj-11-2kjhce90 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f2qypy55.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56acb0aa3ce45532a9e2dbc1a561fa98 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrbt-11-f2qypy55.1/nmdc_wfrbt-11-f2qypy55.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56acb0aa3ce45532a9e2dbc1a561fa98 nmdc:dobj-11-3b816776 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f2qypy55.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:402085cdc09bb149d5769f7cd0058691 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrbt-11-f2qypy55.1/nmdc_wfrbt-11-f2qypy55.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:402085cdc09bb149d5769f7cd0058691 nmdc:dobj-11-bwxrfz73 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f2qypy55.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a50fcffcefc446fae48ff2cdedf90df8 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrbt-11-f2qypy55.1/nmdc_wfrbt-11-f2qypy55.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a50fcffcefc446fae48ff2cdedf90df8 nmdc:dobj-11-24dqeb02 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f2qypy55.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:151fba5ce977f097ff406554d2bfec75 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrbt-11-f2qypy55.1/nmdc_wfrbt-11-f2qypy55.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:151fba5ce977f097ff406554d2bfec75 nmdc:dobj-11-p1fqgg77 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f2qypy55.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d46405137892b3ab5fd842e7a1b18e5d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrbt-11-f2qypy55.1/nmdc_wfrbt-11-f2qypy55.1_centrifuge_krona.html 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nmdc:e5f720c41b7b879274fcc8cb60a19200 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrbt-11-f2qypy55.1/nmdc_wfrbt-11-f2qypy55.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5f720c41b7b879274fcc8cb60a19200 nmdc:dobj-11-wbx6f580 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f2qypy55.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5657bcfecfff34d1ac9be5a0de8c1043 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tc43pg33/nmdc:wfrbt-11-f2qypy55.1/nmdc_wfrbt-11-f2qypy55.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5657bcfecfff34d1ac9be5a0de8c1043 nmdc:dobj-11-at92ms88 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-tc43pg33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f2qypy55.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cb9109c10c4a12be7fbe80ae522ff279 nmdc:wfrbt-11-f2qypy55.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-tc43pg33 +INFO:root:omics_processing_id: nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a127286846b0130f0cbc576517adddd nmdc:dobj-11-nwp59f62 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-asz73v73 +INFO:root:New activity id created for nmdc:omprc-11-asz73v73 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xgmegm13.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrqc-11-xgmegm13.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fab27cbb21c02241758613ed8d8cd1d7 +INFO:root:New file path computed 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nmdc_wfrqc-11-xgmegm13.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b971887b90ad8e3abee5d88ecfe2d53d nmdc:wfrqc-11-xgmegm13.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-asz73v73 +INFO:root:New activity id created for nmdc:omprc-11-asz73v73 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ezfefz28.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfmgas-11-ezfefz28.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9aaf56f937c204de0c55fc66f90eddb5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfmgas-11-ezfefz28.1/nmdc_wfmgas-11-ezfefz28.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9aaf56f937c204de0c55fc66f90eddb5 nmdc:dobj-11-758m7256 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ezfefz28.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d67663a216595dc31b6b2f2fbeff8537 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfmgas-11-ezfefz28.1/nmdc_wfmgas-11-ezfefz28.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d67663a216595dc31b6b2f2fbeff8537 nmdc:dobj-11-5bkxqf19 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ezfefz28.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ff2096c5794b256b5408770949b299c +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfmgas-11-ezfefz28.1/nmdc_wfmgas-11-ezfefz28.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ff2096c5794b256b5408770949b299c nmdc:dobj-11-g9dt2g65 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ezfefz28.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f2d7619bc33a077d67568921ee649b1 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfmgas-11-ezfefz28.1/nmdc_wfmgas-11-ezfefz28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f2d7619bc33a077d67568921ee649b1 nmdc:dobj-11-vd8tsp85 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ezfefz28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d020e38fa6f10b98b42c37b188fc39c0 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfmgas-11-ezfefz28.1/nmdc_wfmgas-11-ezfefz28.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d020e38fa6f10b98b42c37b188fc39c0 nmdc:dobj-11-atfe7z86 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ezfefz28.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b971887b90ad8e3abee5d88ecfe2d53d nmdc:wfmgas-11-ezfefz28.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-asz73v73 +INFO:root:New activity id created for nmdc:omprc-11-asz73v73 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-04r0cn10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dfb57bc44e093b721b9f79be0bbe210d +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfb57bc44e093b721b9f79be0bbe210d nmdc:dobj-11-smnyrc30 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:068496325f4ec328b8d25953df5e1c24 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:068496325f4ec328b8d25953df5e1c24 nmdc:dobj-11-m0r9e749 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:584890c2e22adcff9f7cf3faef14e9a6 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:584890c2e22adcff9f7cf3faef14e9a6 nmdc:dobj-11-myywsw98 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db9ead78e383dcb4be7dfe75fade435a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db9ead78e383dcb4be7dfe75fade435a nmdc:dobj-11-p0zexw66 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43cfb18c8a12fb93c31a7f43ade2d309 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43cfb18c8a12fb93c31a7f43ade2d309 nmdc:dobj-11-1rqpee38 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65e2f037616da7e19d758b474a1ba48b +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65e2f037616da7e19d758b474a1ba48b nmdc:dobj-11-7tkshy67 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0210bc778eebd45d321ef83521513a8 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0210bc778eebd45d321ef83521513a8 nmdc:dobj-11-k14pbx68 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a675fb8e76ce7ccfb0b6cd2b7fb0d27 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a675fb8e76ce7ccfb0b6cd2b7fb0d27 nmdc:dobj-11-cw1yxx40 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7a7437264a52f066b5239e7f7b05bae +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-asz73v73/nmdc:wfrbt-11-04r0cn10.1/nmdc_wfrbt-11-04r0cn10.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7a7437264a52f066b5239e7f7b05bae nmdc:dobj-11-pvv7rv11 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-asz73v73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-04r0cn10.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b971887b90ad8e3abee5d88ecfe2d53d nmdc:wfrbt-11-04r0cn10.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-asz73v73 +INFO:root:Writing 103 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-076c9980_re_ided_record_dump.json +INFO:root:Elapsed time: 1152.5817959308624 diff --git a/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_extract_records.log b/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_extract_records.log index 7b75af88..a8ebab93 100644 --- a/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_extract_records.log +++ b/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_extract_records.log @@ -5,637 +5,708 @@ INFO:root:study_id: nmdc:sty-11-33fbta56 INFO:root:Retrieved 192 OmicsProcessing records for study nmdc:sty-11-33fbta56 INFO:root:omics_processing_record: nmdc:omprc-11-av2pt607 INFO:root:legacy_id: gold:Gp0138727 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-av2pt607 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8d16af5ca7671f7dc42de14deb8b0dd5 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138727 INFO:root:found 1 records INFO:root:record: nmdc:b23607de481eac9d93776f1eb805e989, Read QC Activity for nmdc:mga0ac72 -INFO:root:PassingDataObject: nmdc:56ba958be56af80bb4fc27f4635edaa5 INFO:root:PassingDataObject: nmdc:3bcffdf80842f9fcb2c9c62c35ad28c6 +INFO:root:PassingDataObject: nmdc:56ba958be56af80bb4fc27f4635edaa5 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138727 INFO:root:found 1 records INFO:root:record: nmdc:b23607de481eac9d93776f1eb805e989, ReadBased Analysis Activity for nmdc:mga0ac72 -INFO:root:PassingDataObject: nmdc:a1fd51f1e8db0648782ae6d29e583d5b -INFO:root:PassingDataObject: nmdc:11bee827a9abef578eb6610dc515fe04 -INFO:root:PassingDataObject: nmdc:fa401a0a97e73130ebfffcb25efef945 +INFO:root:PassingDataObject: nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 INFO:root:PassingDataObject: nmdc:a3d3f0f87d622ef5a110bb494b8c95f0 -INFO:root:PassingDataObject: nmdc:9a9b94f65b6f0af2208735238ddeb02c INFO:root:PassingDataObject: nmdc:a5468325ed4b6b62bb116ff5142ff33d -INFO:root:PassingDataObject: nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 -INFO:root:PassingDataObject: nmdc:dce7c900d1ab453a1d95bd3979c7a017 +INFO:root:PassingDataObject: nmdc:fa401a0a97e73130ebfffcb25efef945 +INFO:root:PassingDataObject: nmdc:a1fd51f1e8db0648782ae6d29e583d5b +INFO:root:PassingDataObject: nmdc:9a9b94f65b6f0af2208735238ddeb02c +INFO:root:PassingDataObject: nmdc:11bee827a9abef578eb6610dc515fe04 INFO:root:PassingDataObject: nmdc:920790e781e64cd3eed3a32c521ffda7 +INFO:root:PassingDataObject: nmdc:dce7c900d1ab453a1d95bd3979c7a017 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138727 INFO:root:found 1 records INFO:root:record: nmdc:b23607de481eac9d93776f1eb805e989, Assembly Activity for nmdc:mga0ac72 -INFO:root:PassingDataObject: nmdc:623f8105bab94519da3d5a620b8bf6da +INFO:root:PassingDataObject: nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de +INFO:root:PassingDataObject: nmdc:3393ec1177ba82d1b16364a757a19173 INFO:root:PassingDataObject: nmdc:19023d87b3cdd9de7b40dbfc23e38c89 INFO:root:PassingDataObject: nmdc:582604e1df5f4337462b29ce34f2c02e -INFO:root:PassingDataObject: nmdc:3393ec1177ba82d1b16364a757a19173 -INFO:root:PassingDataObject: nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de +INFO:root:PassingDataObject: nmdc:623f8105bab94519da3d5a620b8bf6da INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138727 INFO:root:found 1 records INFO:root:record: nmdc:b23607de481eac9d93776f1eb805e989, Annotation Activity for nmdc:mga0ac72 -INFO:root:PassingDataObject: nmdc:48f158b9bdcee0135669cd2c5a5ccc25 +INFO:root:PassingDataObject: nmdc:a28899511c3daa0b6aced1e11a875548 INFO:root:PassingDataObject: nmdc:7fd3eb7eaae276c4822f5ce2de5a766c +INFO:root:PassingDataObject: nmdc:54ac7bde0d6b18bc7b1c0cafecd787d1 +INFO:root:PassingDataObject: nmdc:48f158b9bdcee0135669cd2c5a5ccc25 +INFO:root:PassingDataObject: nmdc:94edd28d2b641ba4f0e885ef0bc72b00 +INFO:root:PassingDataObject: nmdc:d998a307658a2c4f556721492358ad3d +INFO:root:PassingDataObject: nmdc:60e047950ea225f6ac8f677dbae225ed INFO:root:PassingDataObject: nmdc:6d9f0228e3ff9158b6fbac9518ffaba6 INFO:root:PassingDataObject: nmdc:a947acf706f9fc7539d50169d72e015f +INFO:root:PassingDataObject: nmdc:f5d3de8796889a3d67fc83aeff5bd9f9 INFO:root:PassingDataObject: nmdc:8c8bba0eee92f65c928071da947057c5 -INFO:root:PassingDataObject: nmdc:60e047950ea225f6ac8f677dbae225ed -INFO:root:PassingDataObject: nmdc:d998a307658a2c4f556721492358ad3d -INFO:root:PassingDataObject: nmdc:54ac7bde0d6b18bc7b1c0cafecd787d1 -INFO:root:PassingDataObject: nmdc:baad9903d8f79540001fdf080a5cd297 -INFO:root:PassingDataObject: nmdc:a28899511c3daa0b6aced1e11a875548 -INFO:root:PassingDataObject: nmdc:cb256fb69ba245f710adeeaad8f4a16a +INFO:root:PassingDataObject: nmdc:b42299646345d5801fe7b5a579f434cc +INFO:root:PassingDataObject: nmdc:3ac986bab3bb921e02aadcada39a64cd INFO:root:PassingDataObject: nmdc:2864325ac58cd499a110e262de3e892c -INFO:root:PassingDataObject: nmdc:f6b443fde046b113b1bb33cf0b23ba3b -INFO:root:PassingDataObject: nmdc:94edd28d2b641ba4f0e885ef0bc72b00 -INFO:root:PassingDataObject: nmdc:2a483528125e727ebb6b1c95269fcc97 -INFO:root:PassingDataObject: nmdc:f5d3de8796889a3d67fc83aeff5bd9f9 INFO:root:PassingDataObject: nmdc:38cf4f39b765c7165cf4d4b72313d28d -INFO:root:PassingDataObject: nmdc:3ac986bab3bb921e02aadcada39a64cd -INFO:root:PassingDataObject: nmdc:b42299646345d5801fe7b5a579f434cc +INFO:root:PassingDataObject: nmdc:cb256fb69ba245f710adeeaad8f4a16a +INFO:root:PassingDataObject: nmdc:2a483528125e727ebb6b1c95269fcc97 +INFO:root:PassingDataObject: nmdc:baad9903d8f79540001fdf080a5cd297 +INFO:root:PassingDataObject: nmdc:f6b443fde046b113b1bb33cf0b23ba3b INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138727 INFO:root:found 1 records INFO:root:record: nmdc:b23607de481eac9d93776f1eb805e989, MAGs Analysis Activity for nmdc:mga0ac72 -INFO:root:PassingDataObject: nmdc:4f622e5538026e174a99c87d851a66dd INFO:root:PassingDataObject: nmdc:63a391dcd3889a7ad308b45d2a062a12 +INFO:root:PassingDataObject: nmdc:4f622e5538026e174a99c87d851a66dd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138727 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-8nny2x31 INFO:root:legacy_id: gold:Gp0138728 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-8nny2x31 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2a3baceee6e3dd4c4fc13567c2fd5df3 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, Read QC Activity for nmdc:mga0k311 -INFO:root:PassingDataObject: nmdc:39dfcb6a3f2afed8306b3666ec98c75b INFO:root:PassingDataObject: nmdc:88f1d63bc4bbca5e443d53b878eea85a +INFO:root:PassingDataObject: nmdc:39dfcb6a3f2afed8306b3666ec98c75b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, ReadBased Analysis Activity for nmdc:mga0k311 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:a5fba8fca3b75c9e0b564a8e311adf46 -ERROR:root:FailedDataObject: nmdc:b2ebb165844db26924a6697e7047988b, -ERROR:root:FailedDataObject: nmdc:65ebc0e915b82640592a89c406f0465f, -ERROR:root:FailedDataObject: nmdc:b36e981c6d9031d6495c2691fe3523b1, -ERROR:root:FailedDataObject: nmdc:c8ed546d4bb69c4b6f122d933dcb79af, +INFO:root:PassingDataObject: nmdc:5f407fa0ab30bf4c41ed96f288084147 +INFO:root:PassingDataObject: nmdc:c8ed546d4bb69c4b6f122d933dcb79af +INFO:root:PassingDataObject: nmdc:e798be205cffa0dc38d93310fdaed9ca +INFO:root:PassingDataObject: nmdc:65ebc0e915b82640592a89c406f0465f ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:a5fba8fca3b75c9e0b564a8e311adf46 -ERROR:root:FailedDataObject: nmdc:e798be205cffa0dc38d93310fdaed9ca, -ERROR:root:FailedDataObject: nmdc:5f407fa0ab30bf4c41ed96f288084147, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:a5fba8fca3b75c9e0b564a8e311adf46 ERROR:root:FailedDataObject: nmdc:f61889342f732f8e12b5f818cfe02e7f, +ERROR:root:FailedDataObject: nmdc:b36e981c6d9031d6495c2691fe3523b1, +ERROR:root:FailedDataObject: nmdc:b2ebb165844db26924a6697e7047988b, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, ReadBased Analysis Activity for nmdc:mga0k311 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, Assembly Activity for nmdc:mga0k311 -INFO:root:PassingDataObject: nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d -INFO:root:PassingDataObject: nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 -INFO:root:PassingDataObject: nmdc:9a574224aebfebcc159a8eca738f9959 -INFO:root:PassingDataObject: nmdc:baacf8df3c4d301e397f4e2202cf68b1 INFO:root:PassingDataObject: nmdc:cb0d9e427179d63f3b38a5fc2eb53c02 +INFO:root:PassingDataObject: nmdc:baacf8df3c4d301e397f4e2202cf68b1 +INFO:root:PassingDataObject: nmdc:9a574224aebfebcc159a8eca738f9959 +INFO:root:PassingDataObject: nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 +INFO:root:PassingDataObject: nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, Annotation Activity for nmdc:mga0k311 -INFO:root:PassingDataObject: nmdc:935f7b73ddcc7c443a303224a2996d1d +INFO:root:PassingDataObject: nmdc:ec8e0a71e4458ace5d93de19227f5270 INFO:root:PassingDataObject: nmdc:ff8e4ec55aee5652030e1692c961aec6 +INFO:root:PassingDataObject: nmdc:935f7b73ddcc7c443a303224a2996d1d INFO:root:PassingDataObject: nmdc:bf7ae846284f9eba2f0e313d80159222 -INFO:root:PassingDataObject: nmdc:e78c0eb8617e1a8f11e1fbee4350c943 -INFO:root:PassingDataObject: nmdc:30757259de100a7b53499c95bbb12f7c -INFO:root:PassingDataObject: nmdc:9d3e249a48788b5d6d4fe62d9ccd7fb7 -INFO:root:PassingDataObject: nmdc:c8ccaac0f4893c7340e2fe81fd3ac06b -INFO:root:PassingDataObject: nmdc:1dbfe9b773cfaf29b1d2f95f98e184d2 -INFO:root:PassingDataObject: nmdc:c265c0a18455d5ff859731448fad914d -INFO:root:PassingDataObject: nmdc:6949bbccc09f9d533e206199f928c7db INFO:root:PassingDataObject: nmdc:83d0d400353ac4e8cb1b09e37f7fb259 -INFO:root:PassingDataObject: nmdc:6e10cc7a09702f641efe27df767c73bc -INFO:root:PassingDataObject: nmdc:9ba7a4c8fc71992eb1500790f2e9ae7b +INFO:root:PassingDataObject: nmdc:6949bbccc09f9d533e206199f928c7db +INFO:root:PassingDataObject: nmdc:e78c0eb8617e1a8f11e1fbee4350c943 INFO:root:PassingDataObject: nmdc:938023547f2caad03223922dfc17f638 -INFO:root:PassingDataObject: nmdc:ec8e0a71e4458ace5d93de19227f5270 INFO:root:PassingDataObject: nmdc:d4d9a50170ed9791ddc9d4609d6e7eb5 INFO:root:PassingDataObject: nmdc:20b14d6ade215c909859ed1e3d2b55ff -INFO:root:PassingDataObject: nmdc:dedd158aeae5fe6355593fa8c117dfbf INFO:root:PassingDataObject: nmdc:f544427535b0d9a31fd99ef78531092f +INFO:root:PassingDataObject: nmdc:c265c0a18455d5ff859731448fad914d +INFO:root:PassingDataObject: nmdc:30757259de100a7b53499c95bbb12f7c +INFO:root:PassingDataObject: nmdc:dedd158aeae5fe6355593fa8c117dfbf +INFO:root:PassingDataObject: nmdc:c8ccaac0f4893c7340e2fe81fd3ac06b +INFO:root:PassingDataObject: nmdc:6e10cc7a09702f641efe27df767c73bc +INFO:root:PassingDataObject: nmdc:1dbfe9b773cfaf29b1d2f95f98e184d2 +INFO:root:PassingDataObject: nmdc:9ba7a4c8fc71992eb1500790f2e9ae7b +INFO:root:PassingDataObject: nmdc:9d3e249a48788b5d6d4fe62d9ccd7fb7 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138728 INFO:root:found 1 records INFO:root:record: nmdc:a5fba8fca3b75c9e0b564a8e311adf46, MAGs Analysis Activity for nmdc:mga0k311 INFO:root:PassingDataObject: nmdc:0ae564e069e0eac70343b2892cf6063f INFO:root:PassingDataObject: nmdc:e387ccd75c4bfdbc6847fc54942e8f33 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138728 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-kehaxy70 INFO:root:legacy_id: gold:Gp0138731 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-kehaxy70 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:91ab0ce1ea61b477a64e57a872624cb4 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138731 INFO:root:found 1 records INFO:root:record: nmdc:892b1e4dcd8dc413236a1e008577156b, Read QC Activity for nmdc:mga02585 -INFO:root:PassingDataObject: nmdc:83dc80cba46c2e8979928b07d7cacc52 INFO:root:PassingDataObject: nmdc:86750c55b1a31ad521879421b0412a84 +INFO:root:PassingDataObject: nmdc:83dc80cba46c2e8979928b07d7cacc52 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138731 INFO:root:found 1 records INFO:root:record: nmdc:892b1e4dcd8dc413236a1e008577156b, ReadBased Analysis Activity for nmdc:mga02585 -INFO:root:PassingDataObject: nmdc:f19bb4b52cad7f784386f91e155f999a -INFO:root:PassingDataObject: nmdc:f5f2240a59f252bd85b05dfea67935a0 -INFO:root:PassingDataObject: nmdc:7ac7432d14596f5a627ec1335698f2a8 +INFO:root:PassingDataObject: nmdc:108ee81d2b63a8bfdcdffd57a2527449 +INFO:root:PassingDataObject: nmdc:0c58aef8eb55d4340c74407874ddd5d7 INFO:root:PassingDataObject: nmdc:457fd17d3206e438c0923d5a476e4da6 INFO:root:PassingDataObject: nmdc:9493a2d1a5bc0fa675a045672c2a0e81 INFO:root:PassingDataObject: nmdc:d6e2df5e68ee64e0b238c9933b63ab6f +INFO:root:PassingDataObject: nmdc:f19bb4b52cad7f784386f91e155f999a +INFO:root:PassingDataObject: nmdc:f5f2240a59f252bd85b05dfea67935a0 +INFO:root:PassingDataObject: nmdc:7ac7432d14596f5a627ec1335698f2a8 INFO:root:PassingDataObject: nmdc:3b149c1f7ee97c58fc80e9d1e846370c -INFO:root:PassingDataObject: nmdc:0c58aef8eb55d4340c74407874ddd5d7 -INFO:root:PassingDataObject: nmdc:108ee81d2b63a8bfdcdffd57a2527449 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138731 INFO:root:found 1 records INFO:root:record: nmdc:892b1e4dcd8dc413236a1e008577156b, Assembly Activity for nmdc:mga02585 -INFO:root:PassingDataObject: nmdc:c8aedb23e2b4fa5c601e57f6910396da -INFO:root:PassingDataObject: nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 -INFO:root:PassingDataObject: nmdc:53fd9f9a2c4c536c87a5019541a4fb0d INFO:root:PassingDataObject: nmdc:74d5bc61e3be4595a9ad0df3bbd3797f +INFO:root:PassingDataObject: nmdc:53fd9f9a2c4c536c87a5019541a4fb0d +INFO:root:PassingDataObject: nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 +INFO:root:PassingDataObject: nmdc:c8aedb23e2b4fa5c601e57f6910396da INFO:root:PassingDataObject: nmdc:47d64c1d12dbeb9f477a3d5136bb86c1 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138731 INFO:root:found 1 records INFO:root:record: nmdc:892b1e4dcd8dc413236a1e008577156b, Annotation Activity for nmdc:mga02585 -INFO:root:PassingDataObject: nmdc:15f2c98af9be32cf3d1a273a32ca0e6a +INFO:root:PassingDataObject: nmdc:201b1581ddd15df11983f81189bd117d INFO:root:PassingDataObject: nmdc:51ae744151fba7a6f5e048c6590f6cee -INFO:root:PassingDataObject: nmdc:f0e91d4dce7c6ded38b62ea25fc7a4f0 -INFO:root:PassingDataObject: nmdc:66837869020e8e7b2c11fcfa9bab03c8 -INFO:root:PassingDataObject: nmdc:a59f9c807b367af8a8d00291a7f13ad0 -INFO:root:PassingDataObject: nmdc:ec9f120e0da93e8a8bc81fee028fe058 INFO:root:PassingDataObject: nmdc:f3ee42e9abc87232e9f56a06a4681bf8 +INFO:root:PassingDataObject: nmdc:66837869020e8e7b2c11fcfa9bab03c8 INFO:root:PassingDataObject: nmdc:e831bf789934d693028cb3f0231c6792 -INFO:root:PassingDataObject: nmdc:201b1581ddd15df11983f81189bd117d -INFO:root:PassingDataObject: nmdc:cb704188f63145a2381fe3ac15385cfc -INFO:root:PassingDataObject: nmdc:e91fe62aaf7d798d8d99d34c2378ae12 -INFO:root:PassingDataObject: nmdc:b46f4fd87e0e5a42f22b5649633408f7 -INFO:root:PassingDataObject: nmdc:836146e1656dce189ac1f5128c647a0a -INFO:root:PassingDataObject: nmdc:35ae528f9a59e9bfa4c7f5075caa7c55 -INFO:root:PassingDataObject: nmdc:9a5200fc3667f94a26f9daff3e7896dc INFO:root:PassingDataObject: nmdc:c29a380d9a08d93143ff303542356a7e -INFO:root:PassingDataObject: nmdc:7100fadd3a1f4f7e7fac0f4d5a2de839 +INFO:root:PassingDataObject: nmdc:a59f9c807b367af8a8d00291a7f13ad0 +INFO:root:PassingDataObject: nmdc:35ae528f9a59e9bfa4c7f5075caa7c55 +INFO:root:PassingDataObject: nmdc:b46f4fd87e0e5a42f22b5649633408f7 INFO:root:PassingDataObject: nmdc:e27e6ee3918aef9fcd5bfd6b81cb9369 +INFO:root:PassingDataObject: nmdc:f0e91d4dce7c6ded38b62ea25fc7a4f0 +INFO:root:PassingDataObject: nmdc:e91fe62aaf7d798d8d99d34c2378ae12 +INFO:root:PassingDataObject: nmdc:15f2c98af9be32cf3d1a273a32ca0e6a INFO:root:PassingDataObject: nmdc:db35f8b1f1e3a99065fdb18be15c259e +INFO:root:PassingDataObject: nmdc:9a5200fc3667f94a26f9daff3e7896dc +INFO:root:PassingDataObject: nmdc:ec9f120e0da93e8a8bc81fee028fe058 +INFO:root:PassingDataObject: nmdc:836146e1656dce189ac1f5128c647a0a +INFO:root:PassingDataObject: nmdc:7100fadd3a1f4f7e7fac0f4d5a2de839 +INFO:root:PassingDataObject: nmdc:cb704188f63145a2381fe3ac15385cfc INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138731 INFO:root:found 1 records INFO:root:record: nmdc:892b1e4dcd8dc413236a1e008577156b, MAGs Analysis Activity for nmdc:mga02585 INFO:root:PassingDataObject: nmdc:0631d78bd9a6068c4182575e06dee00f INFO:root:PassingDataObject: nmdc:f81701e3622073ac34c6cc479b629138 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138731 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-vy356n82 INFO:root:legacy_id: gold:Gp0138730 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-vy356n82 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8f80860812e425dd92344f1f056d3d7e INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, Read QC Activity for nmdc:mga04g54 INFO:root:PassingDataObject: nmdc:6ff08bff105c41ebee127d980006ba79 INFO:root:PassingDataObject: nmdc:ad6ccb8e44538b418e5a90a47a3a95b8 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, ReadBased Analysis Activity for nmdc:mga04g54 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 -ERROR:root:FailedDataObject: nmdc:822c7442bc7abceae5907c25950df957, -ERROR:root:FailedDataObject: nmdc:5023f7fe5f6d3ee8d904bed0099a7b20, -ERROR:root:FailedDataObject: nmdc:e6c87c6ae4e81e8620ed9b1db2089544, -ERROR:root:FailedDataObject: nmdc:71f500ec517ea2cf44da02241e03c24b, -ERROR:root:FailedDataObject: nmdc:401b5cf24d453cd157a486bbf3b99736, +INFO:root:PassingDataObject: nmdc:71f500ec517ea2cf44da02241e03c24b +INFO:root:PassingDataObject: nmdc:822c7442bc7abceae5907c25950df957 +INFO:root:PassingDataObject: nmdc:401b5cf24d453cd157a486bbf3b99736 +INFO:root:PassingDataObject: nmdc:5023f7fe5f6d3ee8d904bed0099a7b20 +INFO:root:PassingDataObject: nmdc:1427b40ba7b82073434004c4ac58ce67 +INFO:root:PassingDataObject: nmdc:159bcc899b358d4240c5f5e43dbee9b5 +INFO:root:PassingDataObject: nmdc:e6c87c6ae4e81e8620ed9b1db2089544 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 -ERROR:root:FailedDataObject: nmdc:1427b40ba7b82073434004c4ac58ce67, -ERROR:root:FailedDataObject: nmdc:159bcc899b358d4240c5f5e43dbee9b5, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, ReadBased Analysis Activity for nmdc:mga04g54 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, Assembly Activity for nmdc:mga04g54 -INFO:root:PassingDataObject: nmdc:4c5a5690d01093f5eb72862fb98e0988 INFO:root:PassingDataObject: nmdc:7711cd75bbcab369e2b44f73b2c01fcb -INFO:root:PassingDataObject: nmdc:4babbf701f66184084f500079d31a005 INFO:root:PassingDataObject: nmdc:0c2acd3eec955d6680787392cd3793c5 +INFO:root:PassingDataObject: nmdc:4c5a5690d01093f5eb72862fb98e0988 +INFO:root:PassingDataObject: nmdc:4babbf701f66184084f500079d31a005 INFO:root:PassingDataObject: nmdc:48c2645a14aecfee5bcbcd5e650a49ad INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, Annotation Activity for nmdc:mga04g54 -INFO:root:PassingDataObject: nmdc:0ecd7301a9a005cbc7b03d47b17b2ef3 -INFO:root:PassingDataObject: nmdc:04bb4f9347c8a8249ec0195efafc4c47 -INFO:root:PassingDataObject: nmdc:8bd1119c07b414675365d01abb38413b INFO:root:PassingDataObject: nmdc:b3a133a713e296c4b2fefa37428f267f -INFO:root:PassingDataObject: nmdc:c806670f529a8fdbef0cfd89123d7f00 +INFO:root:PassingDataObject: nmdc:1283ef0472b27c2ad4cdbb848dbd4bca +INFO:root:PassingDataObject: nmdc:88945c22930146a1465ad5dc13817a42 +INFO:root:PassingDataObject: nmdc:c619101979ea02f3fed22234edde0e94 +INFO:root:PassingDataObject: nmdc:91c32c903e7c61125fc8f6b8d9db9897 INFO:root:PassingDataObject: nmdc:401de8c1e234359d698b9921d7dc525b +INFO:root:PassingDataObject: nmdc:8bd1119c07b414675365d01abb38413b +INFO:root:PassingDataObject: nmdc:06d49a3f34a35509e580740b9652b91d INFO:root:PassingDataObject: nmdc:6257eca7b1724d73b982fb1d84a22627 -INFO:root:PassingDataObject: nmdc:c619101979ea02f3fed22234edde0e94 +INFO:root:PassingDataObject: nmdc:04bb4f9347c8a8249ec0195efafc4c47 +INFO:root:PassingDataObject: nmdc:1b2103ef2ab7424f55f251e422689008 INFO:root:PassingDataObject: nmdc:c4530d8ecb4eb32e16a730d24cc28204 -INFO:root:PassingDataObject: nmdc:894b7c5ca83389dad3f974216d70d6d7 INFO:root:PassingDataObject: nmdc:e4c3461c1000a64d6a4634b4892164bb -INFO:root:PassingDataObject: nmdc:88945c22930146a1465ad5dc13817a42 -INFO:root:PassingDataObject: nmdc:1b2103ef2ab7424f55f251e422689008 -INFO:root:PassingDataObject: nmdc:1283ef0472b27c2ad4cdbb848dbd4bca -INFO:root:PassingDataObject: nmdc:d9564fe3331cd74e58ad2b669cfa0a73 INFO:root:PassingDataObject: nmdc:3913258d4842472c903ed41681e4c493 +INFO:root:PassingDataObject: nmdc:c806670f529a8fdbef0cfd89123d7f00 +INFO:root:PassingDataObject: nmdc:0ecd7301a9a005cbc7b03d47b17b2ef3 INFO:root:PassingDataObject: nmdc:7a33690f2e3c02320075d1bf104d4a62 -INFO:root:PassingDataObject: nmdc:91c32c903e7c61125fc8f6b8d9db9897 -INFO:root:PassingDataObject: nmdc:06d49a3f34a35509e580740b9652b91d +INFO:root:PassingDataObject: nmdc:894b7c5ca83389dad3f974216d70d6d7 +INFO:root:PassingDataObject: nmdc:d9564fe3331cd74e58ad2b669cfa0a73 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138730 INFO:root:found 1 records INFO:root:record: nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2, MAGs Analysis Activity for nmdc:mga04g54 INFO:root:PassingDataObject: nmdc:f417f9be65ec04e94e9e2de9d9df4898 INFO:root:PassingDataObject: nmdc:82e2810da1372d4c6c69b99dfcbaf018 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138730 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-prb0cv32 INFO:root:legacy_id: gold:Gp0138729 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-prb0cv32 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:52c9e32cf184310313c50a4b0f98f87f INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, Read QC Activity for nmdc:mga0zv48 INFO:root:PassingDataObject: nmdc:42ea257e18361687ddf5a1c561971f3e INFO:root:PassingDataObject: nmdc:8892ad845b7a08506e97587ab0219691 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, ReadBased Analysis Activity for nmdc:mga0zv48 -INFO:root:PassingDataObject: nmdc:170d1ae61e822af33e8808f9f579e702 -INFO:root:PassingDataObject: nmdc:c1dfc047ba2e0f5eb215770777e96581 -INFO:root:PassingDataObject: nmdc:00cf10012ed2ab5fd30e4af4c45aa506 -INFO:root:PassingDataObject: nmdc:c1149272190dabdc7eb40ae4dad2151e -INFO:root:PassingDataObject: nmdc:673fd43b0ba6af4a04221b7553288e3c INFO:root:PassingDataObject: nmdc:73cdf01b96a864c8af6b6404c9e2c557 INFO:root:PassingDataObject: nmdc:d558a4ade655a4995104fcf89a97fdfa +INFO:root:PassingDataObject: nmdc:673fd43b0ba6af4a04221b7553288e3c +INFO:root:PassingDataObject: nmdc:c1149272190dabdc7eb40ae4dad2151e INFO:root:PassingDataObject: nmdc:cfcf2defaa1760ebbb3f41e479d854ad +INFO:root:PassingDataObject: nmdc:00cf10012ed2ab5fd30e4af4c45aa506 +INFO:root:PassingDataObject: nmdc:170d1ae61e822af33e8808f9f579e702 INFO:root:PassingDataObject: nmdc:78ee66b725142022b978b88954280a9d +INFO:root:PassingDataObject: nmdc:c1dfc047ba2e0f5eb215770777e96581 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, Assembly Activity for nmdc:mga0zv48 -INFO:root:PassingDataObject: nmdc:710bafb899ee5b54d745c5f8f10178b8 INFO:root:PassingDataObject: nmdc:c16092240ebabbe0ac347cb8c6a3561f +INFO:root:PassingDataObject: nmdc:519e8feebab80f5ca632f919651a68b5 INFO:root:PassingDataObject: nmdc:fc0eb020cbf500b589498152428c5249 +INFO:root:PassingDataObject: nmdc:710bafb899ee5b54d745c5f8f10178b8 INFO:root:PassingDataObject: nmdc:25bf97ed153656858b43652a17ee3744 -INFO:root:PassingDataObject: nmdc:519e8feebab80f5ca632f919651a68b5 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, Annotation Activity for nmdc:mga0zv48 -INFO:root:PassingDataObject: nmdc:16655c802441f30dfcf9a19196b06492 +INFO:root:PassingDataObject: nmdc:ced27e756304ece15199f118c8fa15d9 +INFO:root:PassingDataObject: nmdc:27e608b0794f4d6612a43ae249f9424b +INFO:root:PassingDataObject: nmdc:c2bd07ecfa8a85ed6f51b0ce3351e2e8 +INFO:root:PassingDataObject: nmdc:609d7f10e58ec42509d6c17ca0ab4129 INFO:root:PassingDataObject: nmdc:8b7c2e0457c2641d46b6b86f3c6042fe -INFO:root:PassingDataObject: nmdc:497b858353cb8110f3ac52e79ecf38fa -INFO:root:PassingDataObject: nmdc:4d1c6f9f3fc5064a25890cf21c3d994f +INFO:root:PassingDataObject: nmdc:d13ff73aaf8c761aebad031e9b49a1df +INFO:root:PassingDataObject: nmdc:898d8a5ca7c5c6d560a9b3748346d609 INFO:root:PassingDataObject: nmdc:d53db44b2f7a44f18a72e4e8a354aeb8 -INFO:root:PassingDataObject: nmdc:265b8eedbc092ab5f37706306945ef3b -INFO:root:PassingDataObject: nmdc:609d7f10e58ec42509d6c17ca0ab4129 -INFO:root:PassingDataObject: nmdc:46c56308de0e8f522a582171a9b24135 -INFO:root:PassingDataObject: nmdc:27e608b0794f4d6612a43ae249f9424b INFO:root:PassingDataObject: nmdc:1cb1897c5a34ab051abc0f95815faf1d -INFO:root:PassingDataObject: nmdc:dd6023a23cb1f8a74eecb8b45df6f172 -INFO:root:PassingDataObject: nmdc:788640dc00d08db8319e8e01ba53fffe +INFO:root:PassingDataObject: nmdc:16655c802441f30dfcf9a19196b06492 +INFO:root:PassingDataObject: nmdc:497b858353cb8110f3ac52e79ecf38fa +INFO:root:PassingDataObject: nmdc:7e974b0d2771dc21da1f503222168dc1 INFO:root:PassingDataObject: nmdc:220ef9e614affdbecd735a7776de5c1f -INFO:root:PassingDataObject: nmdc:ced27e756304ece15199f118c8fa15d9 -INFO:root:PassingDataObject: nmdc:c2bd07ecfa8a85ed6f51b0ce3351e2e8 -INFO:root:PassingDataObject: nmdc:898d8a5ca7c5c6d560a9b3748346d609 INFO:root:PassingDataObject: nmdc:d3cf66a3a9c21bb3135675af703ceec5 -INFO:root:PassingDataObject: nmdc:7e974b0d2771dc21da1f503222168dc1 -INFO:root:PassingDataObject: nmdc:d13ff73aaf8c761aebad031e9b49a1df +INFO:root:PassingDataObject: nmdc:dd6023a23cb1f8a74eecb8b45df6f172 +INFO:root:PassingDataObject: nmdc:4d1c6f9f3fc5064a25890cf21c3d994f +INFO:root:PassingDataObject: nmdc:788640dc00d08db8319e8e01ba53fffe +INFO:root:PassingDataObject: nmdc:46c56308de0e8f522a582171a9b24135 +INFO:root:PassingDataObject: nmdc:265b8eedbc092ab5f37706306945ef3b INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138729 INFO:root:found 1 records INFO:root:record: nmdc:3021b918990263d8bf877ff41bf62f09, MAGs Analysis Activity for nmdc:mga0zv48 INFO:root:PassingDataObject: nmdc:4004239dfad7b245d348c204229174ee INFO:root:PassingDataObject: nmdc:cdacb0d34d64ac9c38ba6bca688e0ca7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138729 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-wg551q49 INFO:root:legacy_id: gold:Gp0138734 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-wg551q49 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:754dde7a211a1cd9ecfb990d799c86fc INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, Read QC Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:b2aacef76b2233c11c9b78d9cdd8490f INFO:root:PassingDataObject: nmdc:976360d3303c62ead30c78611545360b +INFO:root:PassingDataObject: nmdc:b2aacef76b2233c11c9b78d9cdd8490f INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, ReadBased Analysis Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:ef970fcebe1b3873ea2c158b9b6cd19e -INFO:root:PassingDataObject: nmdc:3cf637d814c9beb9a726b1ba61b44b75 INFO:root:PassingDataObject: nmdc:038da6464f3c29fa2dd9f67041a9b32f -INFO:root:PassingDataObject: nmdc:21b08100a7f2d915a81862b906c6ae3b -INFO:root:PassingDataObject: nmdc:54e0ddea48ee8d813764492555b0ecee +INFO:root:PassingDataObject: nmdc:ef970fcebe1b3873ea2c158b9b6cd19e +INFO:root:PassingDataObject: nmdc:0e979e1b9c4f241085492eab236b2829 INFO:root:PassingDataObject: nmdc:d097453c5bd6aca2e844c7836f19dcfa -INFO:root:PassingDataObject: nmdc:14265744b93c11fc6ba858781cb48c88 +INFO:root:PassingDataObject: nmdc:3cf637d814c9beb9a726b1ba61b44b75 INFO:root:PassingDataObject: nmdc:31a7903e5c86cbe82392986253615bcf -INFO:root:PassingDataObject: nmdc:0e979e1b9c4f241085492eab236b2829 +INFO:root:PassingDataObject: nmdc:14265744b93c11fc6ba858781cb48c88 +INFO:root:PassingDataObject: nmdc:54e0ddea48ee8d813764492555b0ecee +INFO:root:PassingDataObject: nmdc:21b08100a7f2d915a81862b906c6ae3b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, Assembly Activity for nmdc:mga0q606 +INFO:root:PassingDataObject: nmdc:dc9d10f32066256bc9f37e6769bd21f5 INFO:root:PassingDataObject: nmdc:c315d571185b157f596d9a21884aa537 -INFO:root:PassingDataObject: nmdc:9301ff56d934a5547d16b3872a8a7bd1 INFO:root:PassingDataObject: nmdc:240379c705c2598b90752197e2aa8989 -INFO:root:PassingDataObject: nmdc:dc9d10f32066256bc9f37e6769bd21f5 +INFO:root:PassingDataObject: nmdc:9301ff56d934a5547d16b3872a8a7bd1 INFO:root:PassingDataObject: nmdc:53e156196225b31e3a13394345c3623a INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, Annotation Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:4a9219bb2c7fd51c85383942618e9582 -INFO:root:PassingDataObject: nmdc:6b7f27a57e56a88dfc73581d054a3a95 -INFO:root:PassingDataObject: nmdc:485f886584685423b0d2c2b6ed297f6a -INFO:root:PassingDataObject: nmdc:d92f05e589695962be06bfbce449dcd0 -INFO:root:PassingDataObject: nmdc:6b3388eebf5bf86ed4f1c1cad9910082 -INFO:root:PassingDataObject: nmdc:a7a29af1557903ab7fa826ce30a3cbc1 -INFO:root:PassingDataObject: nmdc:ad9f1240cd86e0d0d1aae08e13e74fd5 -INFO:root:PassingDataObject: nmdc:74ed37c1a81bf5724e05340a4ccf10c0 -INFO:root:PassingDataObject: nmdc:1277be4067074f36866443a88a4eca9b -INFO:root:PassingDataObject: nmdc:633ac08b6d72f927db1d912b890fb420 +INFO:root:PassingDataObject: nmdc:eebbbec7797f1d67338af282df8fd234 +INFO:root:PassingDataObject: nmdc:ff6b4846737b724214d06ba348df6210 INFO:root:PassingDataObject: nmdc:1630909c2bc37b0576f920c3673b718d +INFO:root:PassingDataObject: nmdc:633ac08b6d72f927db1d912b890fb420 +INFO:root:PassingDataObject: nmdc:d6010675e1e2a65f7329498c43784d88 INFO:root:PassingDataObject: nmdc:1e2b2b43c746d42aa754b1ba2b592563 -INFO:root:PassingDataObject: nmdc:ff6b4846737b724214d06ba348df6210 +INFO:root:PassingDataObject: nmdc:1277be4067074f36866443a88a4eca9b INFO:root:PassingDataObject: nmdc:dac0038746c5a9c86a37eb83ff4dd52d +INFO:root:PassingDataObject: nmdc:34187ce4664773e8d071ea68f8a1eb11 +INFO:root:PassingDataObject: nmdc:a7a29af1557903ab7fa826ce30a3cbc1 +INFO:root:PassingDataObject: nmdc:d92f05e589695962be06bfbce449dcd0 INFO:root:PassingDataObject: nmdc:3e08b758d13ca176dbd38d71630fbbb0 +INFO:root:PassingDataObject: nmdc:6b7f27a57e56a88dfc73581d054a3a95 +INFO:root:PassingDataObject: nmdc:ad9f1240cd86e0d0d1aae08e13e74fd5 +INFO:root:PassingDataObject: nmdc:4a9219bb2c7fd51c85383942618e9582 INFO:root:PassingDataObject: nmdc:7a5d3ddf66750a0c1d394497b23d3b62 -INFO:root:PassingDataObject: nmdc:eebbbec7797f1d67338af282df8fd234 -INFO:root:PassingDataObject: nmdc:d6010675e1e2a65f7329498c43784d88 -INFO:root:PassingDataObject: nmdc:34187ce4664773e8d071ea68f8a1eb11 +INFO:root:PassingDataObject: nmdc:6b3388eebf5bf86ed4f1c1cad9910082 +INFO:root:PassingDataObject: nmdc:74ed37c1a81bf5724e05340a4ccf10c0 +INFO:root:PassingDataObject: nmdc:485f886584685423b0d2c2b6ed297f6a INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138734 INFO:root:found 1 records INFO:root:record: nmdc:d9d07cea662e1a3f30d699e2177138b1, MAGs Analysis Activity for nmdc:mga0q606 -INFO:root:PassingDataObject: nmdc:3697b63f4a03482975a7246519524574 INFO:root:PassingDataObject: nmdc:7b99e4b41fe8c3f261296375f81e89c7 +INFO:root:PassingDataObject: nmdc:3697b63f4a03482975a7246519524574 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138734 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-wxmc9q81 INFO:root:legacy_id: gold:Gp0138732 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-wxmc9q81 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:74621bf24161e2e072c651c0c489b521 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, Read QC Activity for nmdc:mga0s123 INFO:root:PassingDataObject: nmdc:273c4e26cd5d78ef298dfbcc05b8a6c0 INFO:root:PassingDataObject: nmdc:256392b86fa641cac718035e6d7c9699 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, ReadBased Analysis Activity for nmdc:mga0s123 -INFO:root:PassingDataObject: nmdc:605c505e6eb56aa78231f4adec6c6677 -INFO:root:PassingDataObject: nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 -INFO:root:PassingDataObject: nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 -INFO:root:PassingDataObject: nmdc:11cac1e08774c7809b9b8b1e44b251fd +INFO:root:PassingDataObject: nmdc:0ef4135167361ad749a7733e5861c8c6 INFO:root:PassingDataObject: nmdc:86bbaf4690e2435bbfff1e3fa037e3b1 INFO:root:PassingDataObject: nmdc:3a81e8a2e7369b8fbea40daf94e7238d -INFO:root:PassingDataObject: nmdc:0ef4135167361ad749a7733e5861c8c6 -INFO:root:PassingDataObject: nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 INFO:root:PassingDataObject: nmdc:6935cee3be218ffa94d2b39f92f19f9f +INFO:root:PassingDataObject: nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 +INFO:root:PassingDataObject: nmdc:605c505e6eb56aa78231f4adec6c6677 +INFO:root:PassingDataObject: nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 +INFO:root:PassingDataObject: nmdc:11cac1e08774c7809b9b8b1e44b251fd +INFO:root:PassingDataObject: nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, Assembly Activity for nmdc:mga0s123 INFO:root:PassingDataObject: nmdc:04c4cbeb14a1521973e441e3bf63c6f0 +INFO:root:PassingDataObject: nmdc:47c2916418a6cf166df77b0ae1163787 INFO:root:PassingDataObject: nmdc:7d11c1515e21c03b397833054bbfc6d2 INFO:root:PassingDataObject: nmdc:27447a319e39a9f2e1284dddb9bc57bb INFO:root:PassingDataObject: nmdc:31755609cea771c4ffd9cd27e3af227f -INFO:root:PassingDataObject: nmdc:47c2916418a6cf166df77b0ae1163787 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, Annotation Activity for nmdc:mga0s123 +INFO:root:PassingDataObject: nmdc:024bb6cf27ee5e46e1f301c54a79a6f9 INFO:root:PassingDataObject: nmdc:1e6e050f63216068ff7cf20faf6fdafb -INFO:root:PassingDataObject: nmdc:4d2b5ed98e8070a9b60d12b0e7b37985 -INFO:root:PassingDataObject: nmdc:e622746f292b7a9b926d531836a7974c -INFO:root:PassingDataObject: nmdc:0dcb23595a4b98514289e8d0dc81699c -INFO:root:PassingDataObject: nmdc:f65bf5b722d3b8af1607e62568f36054 INFO:root:PassingDataObject: nmdc:a87dca20350c928a9abad3ce9f069a60 -INFO:root:PassingDataObject: nmdc:a913c7d050f296963e71f8392f7a5e35 -INFO:root:PassingDataObject: nmdc:e8dc22ebff01c071255e44fa605a4455 -INFO:root:PassingDataObject: nmdc:d680fa9c8d786634c8d6717be629ab2c -INFO:root:PassingDataObject: nmdc:0ec3e366665f88ce3193909b438a1718 INFO:root:PassingDataObject: nmdc:80a14ea7ce007b6ca9a2c9df02015bd7 -INFO:root:PassingDataObject: nmdc:d6700cc63d980884450f32d900502b4a INFO:root:PassingDataObject: nmdc:9c607b9ed1ae683a824d88947fb3e610 +INFO:root:PassingDataObject: nmdc:d6700cc63d980884450f32d900502b4a INFO:root:PassingDataObject: nmdc:dfb4abeda1906d99fd4b51a1957c031c +INFO:root:PassingDataObject: nmdc:e622746f292b7a9b926d531836a7974c +INFO:root:PassingDataObject: nmdc:0dcb23595a4b98514289e8d0dc81699c +INFO:root:PassingDataObject: nmdc:d680fa9c8d786634c8d6717be629ab2c INFO:root:PassingDataObject: nmdc:745634b3500e92f9a692989a13bf4753 INFO:root:PassingDataObject: nmdc:6dbb5dfe3791e1de5d7e94267af87b67 -INFO:root:PassingDataObject: nmdc:024bb6cf27ee5e46e1f301c54a79a6f9 INFO:root:PassingDataObject: nmdc:b1554b516784dbec8e67e9d3215ae136 INFO:root:PassingDataObject: nmdc:dcac9187a9ef976e7260043681d3630f +INFO:root:PassingDataObject: nmdc:4d2b5ed98e8070a9b60d12b0e7b37985 +INFO:root:PassingDataObject: nmdc:e8dc22ebff01c071255e44fa605a4455 +INFO:root:PassingDataObject: nmdc:0ec3e366665f88ce3193909b438a1718 +INFO:root:PassingDataObject: nmdc:a913c7d050f296963e71f8392f7a5e35 +INFO:root:PassingDataObject: nmdc:f65bf5b722d3b8af1607e62568f36054 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138732 INFO:root:found 1 records INFO:root:record: nmdc:a4aaa87e7d724ea07496386fb4f03d4a, MAGs Analysis Activity for nmdc:mga0s123 INFO:root:PassingDataObject: nmdc:994b3028ae77abd9d1e0d6e5b674ba59 INFO:root:PassingDataObject: nmdc:5eb848bf4358d4ef211ea672a89722d2 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138732 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-tr1vzf47 INFO:root:legacy_id: gold:Gp0138735 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-tr1vzf47 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c139345a1c2ba3d6883a53a85463e8e4 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, Read QC Activity for nmdc:mga06a74 INFO:root:PassingDataObject: nmdc:5e397c1b454dc84f97f1bc57052c7193 INFO:root:PassingDataObject: nmdc:b7009ce6e0aa4cc192ce7aea732fbccd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, ReadBased Analysis Activity for nmdc:mga06a74 +INFO:root:PassingDataObject: nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 +INFO:root:PassingDataObject: nmdc:5f73c4622400bb304daaeec954cdd25b +INFO:root:PassingDataObject: nmdc:b205ef3e409a285e33a2375934cecbec +INFO:root:PassingDataObject: nmdc:1a7a236d19019e0d4e21c6f61a7f109b INFO:root:PassingDataObject: nmdc:26d4341d79dc1684a18dfef485301de9 -INFO:root:PassingDataObject: nmdc:47183e38332a6949e0b723540d3f522b INFO:root:PassingDataObject: nmdc:6b81eca09f6ce1b5b749446b273a92d7 -INFO:root:PassingDataObject: nmdc:1a7a236d19019e0d4e21c6f61a7f109b -INFO:root:PassingDataObject: nmdc:b205ef3e409a285e33a2375934cecbec -INFO:root:PassingDataObject: nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 INFO:root:PassingDataObject: nmdc:c6324bb32dd9589af0344fd2266d9360 +INFO:root:PassingDataObject: nmdc:47183e38332a6949e0b723540d3f522b INFO:root:PassingDataObject: nmdc:96ceded2ef09bf9decce3a8486d5599d -INFO:root:PassingDataObject: nmdc:5f73c4622400bb304daaeec954cdd25b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, Assembly Activity for nmdc:mga06a74 -INFO:root:PassingDataObject: nmdc:472cd76f936bba9446e337c328f435e1 -INFO:root:PassingDataObject: nmdc:8d664b59e79df6b3e7d8f20019231dc1 -INFO:root:PassingDataObject: nmdc:fbed2d55f56430a821587ae24af5d6bb INFO:root:PassingDataObject: nmdc:8ba158e8cc9a5dfc54732fb0e085fe73 +INFO:root:PassingDataObject: nmdc:fbed2d55f56430a821587ae24af5d6bb +INFO:root:PassingDataObject: nmdc:8d664b59e79df6b3e7d8f20019231dc1 INFO:root:PassingDataObject: nmdc:34672ea879a19c766f764451f0b968aa +INFO:root:PassingDataObject: nmdc:472cd76f936bba9446e337c328f435e1 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, Annotation Activity for nmdc:mga06a74 -INFO:root:PassingDataObject: nmdc:8e4fa8b4f70d6775eaafd000952b3e78 -INFO:root:PassingDataObject: nmdc:47c851a1cfde3fd1089e7e6e5bcfb017 -INFO:root:PassingDataObject: nmdc:b08adacb304d069e54753e15a8cc127b -INFO:root:PassingDataObject: nmdc:65e138612dd63df7d5102401e083af09 +INFO:root:PassingDataObject: nmdc:bc002133e20eaabff3bca4fb829b1984 INFO:root:PassingDataObject: nmdc:1ebf3f210400cc6b65067dc5585a3d9d INFO:root:PassingDataObject: nmdc:4b79a03003f581d5819d8df17f9182b8 -INFO:root:PassingDataObject: nmdc:fb7e8a3251841b701d3f0571b22edd17 -INFO:root:PassingDataObject: nmdc:137e42ab56d961aa301cc39c1d2f6000 -INFO:root:PassingDataObject: nmdc:bc002133e20eaabff3bca4fb829b1984 -INFO:root:PassingDataObject: nmdc:ce8ef00c6ebca662d7fb2776b1c617fb +INFO:root:PassingDataObject: nmdc:47c851a1cfde3fd1089e7e6e5bcfb017 INFO:root:PassingDataObject: nmdc:3549d803cbdb86255e40a0a591411cf1 -INFO:root:PassingDataObject: nmdc:9e5963eed756c6b5e8d7e5a10df354a9 +INFO:root:PassingDataObject: nmdc:b08adacb304d069e54753e15a8cc127b +INFO:root:PassingDataObject: nmdc:137e42ab56d961aa301cc39c1d2f6000 INFO:root:PassingDataObject: nmdc:7d37a58b6c49790fb3d32b2abe3c19ff -INFO:root:PassingDataObject: nmdc:ad6e7d85404ca8989c951c5c1bc08d6c +INFO:root:PassingDataObject: nmdc:0e7cf0420c093c50dcfcef66db82de9c +INFO:root:PassingDataObject: nmdc:8e4fa8b4f70d6775eaafd000952b3e78 +INFO:root:PassingDataObject: nmdc:32ea2984ed2c9a4129eeefe50d85c66d INFO:root:PassingDataObject: nmdc:7d1d8e5db3f262ddb87496abdc2ccb7e INFO:root:PassingDataObject: nmdc:fade53d6406f5c1c57044a559d2ac64b -INFO:root:PassingDataObject: nmdc:32ea2984ed2c9a4129eeefe50d85c66d +INFO:root:PassingDataObject: nmdc:65e138612dd63df7d5102401e083af09 +INFO:root:PassingDataObject: nmdc:fb7e8a3251841b701d3f0571b22edd17 INFO:root:PassingDataObject: nmdc:e0be62398f583e24949f5dbd5283eedd -INFO:root:PassingDataObject: nmdc:0e7cf0420c093c50dcfcef66db82de9c +INFO:root:PassingDataObject: nmdc:ad6e7d85404ca8989c951c5c1bc08d6c +INFO:root:PassingDataObject: nmdc:ce8ef00c6ebca662d7fb2776b1c617fb +INFO:root:PassingDataObject: nmdc:9e5963eed756c6b5e8d7e5a10df354a9 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138735 INFO:root:found 1 records INFO:root:record: nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1, MAGs Analysis Activity for nmdc:mga06a74 -INFO:root:PassingDataObject: nmdc:7b11afeb8c38eee9255532d26f523666 INFO:root:PassingDataObject: nmdc:464a9f122c7defc701e3433d03fb299a +INFO:root:PassingDataObject: nmdc:7b11afeb8c38eee9255532d26f523666 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138735 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-g4095b91 INFO:root:legacy_id: gold:Gp0138736 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-g4095b91 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:dd43946edb26961e1913c8830f54e5cf INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, Read QC Activity for nmdc:mga0gt36 -INFO:root:PassingDataObject: nmdc:ea8442421f1738797fb1085314cf67e9 INFO:root:PassingDataObject: nmdc:c35cfb19aa8ab125a2c23506526816ec +INFO:root:PassingDataObject: nmdc:ea8442421f1738797fb1085314cf67e9 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, ReadBased Analysis Activity for nmdc:mga0gt36 -INFO:root:PassingDataObject: nmdc:2089bb738e19acf397b874c7ba1ee213 INFO:root:PassingDataObject: nmdc:f311a7ff90a56811d195c02739c75b56 -INFO:root:PassingDataObject: nmdc:ceec1fb674297db511106b4fe435a5a6 -INFO:root:PassingDataObject: nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 +INFO:root:PassingDataObject: nmdc:60adf737df1ff873a4134e0b09abe756 INFO:root:PassingDataObject: nmdc:b913564fdf48c173240c6cb1d43fab57 -INFO:root:PassingDataObject: nmdc:c4b16136fb23593be83b69ddd5286cbe INFO:root:PassingDataObject: nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 +INFO:root:PassingDataObject: nmdc:2089bb738e19acf397b874c7ba1ee213 +INFO:root:PassingDataObject: nmdc:c4b16136fb23593be83b69ddd5286cbe INFO:root:PassingDataObject: nmdc:469261fb4820f3f3ad54d0abadd789a6 -INFO:root:PassingDataObject: nmdc:60adf737df1ff873a4134e0b09abe756 +INFO:root:PassingDataObject: nmdc:ceec1fb674297db511106b4fe435a5a6 +INFO:root:PassingDataObject: nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, Assembly Activity for nmdc:mga0gt36 INFO:root:PassingDataObject: nmdc:72ccfd42865316b6cc8c8dc9695f2c19 INFO:root:PassingDataObject: nmdc:c3b6a61384490607058dbd68e830b19b -INFO:root:PassingDataObject: nmdc:83e82ee96e83096f8011e524a70c08a2 INFO:root:PassingDataObject: nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 +INFO:root:PassingDataObject: nmdc:83e82ee96e83096f8011e524a70c08a2 INFO:root:PassingDataObject: nmdc:4c4d08b0edc259c2a106606221061f0e INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, Annotation Activity for nmdc:mga0gt36 -INFO:root:PassingDataObject: nmdc:b1ddf0d81c78e037baf78d2dd6392715 -INFO:root:PassingDataObject: nmdc:abfc23478caeeec8491474c47eda8515 INFO:root:PassingDataObject: nmdc:7efa9d93a1247532c98ee12f1127dfcc -INFO:root:PassingDataObject: nmdc:927e32d756c43b91fe6757a0109cd6cf -INFO:root:PassingDataObject: nmdc:020321e52a426669faaae3605ccf8ca7 -INFO:root:PassingDataObject: nmdc:cb22bbdb816ac483d9581629ca8b726d INFO:root:PassingDataObject: nmdc:d14d22f94bd8cf5de6df684819a0c0d1 -INFO:root:PassingDataObject: nmdc:0cd3235c18794ce8b446f2c81bcdabf8 -INFO:root:PassingDataObject: nmdc:fa1d1c729cdf3e6d521a9375f3a0385e +INFO:root:PassingDataObject: nmdc:927e32d756c43b91fe6757a0109cd6cf +INFO:root:PassingDataObject: nmdc:cbe004f8b000a6d6c4f49c294b5c9903 INFO:root:PassingDataObject: nmdc:85a7ad766cdc43fa45d4b9810ffc073b -INFO:root:PassingDataObject: nmdc:bdd204879129e8bb1ac27688c512099a +INFO:root:PassingDataObject: nmdc:95c48f4d9521498ef6666739e4c55696 +INFO:root:PassingDataObject: nmdc:abfc23478caeeec8491474c47eda8515 +INFO:root:PassingDataObject: nmdc:b1ddf0d81c78e037baf78d2dd6392715 +INFO:root:PassingDataObject: nmdc:ba7af750da839fc2c094d62327e55fa4 INFO:root:PassingDataObject: nmdc:425c6778a4bf095dc6034fbea33ace0c -INFO:root:PassingDataObject: nmdc:cbe004f8b000a6d6c4f49c294b5c9903 INFO:root:PassingDataObject: nmdc:53df5e5f0489b89e104ec2539c8b0051 -INFO:root:PassingDataObject: nmdc:f1fda559bba59ca313e66a72828681fe +INFO:root:PassingDataObject: nmdc:020321e52a426669faaae3605ccf8ca7 +INFO:root:PassingDataObject: nmdc:0cd3235c18794ce8b446f2c81bcdabf8 INFO:root:PassingDataObject: nmdc:60dfd6ccc385f2cfdc786daff351ccc9 +INFO:root:PassingDataObject: nmdc:bdd204879129e8bb1ac27688c512099a +INFO:root:PassingDataObject: nmdc:fa1d1c729cdf3e6d521a9375f3a0385e +INFO:root:PassingDataObject: nmdc:f1fda559bba59ca313e66a72828681fe +INFO:root:PassingDataObject: nmdc:cb22bbdb816ac483d9581629ca8b726d INFO:root:PassingDataObject: nmdc:d0c5196cec207f223cd4999c56a1c494 -INFO:root:PassingDataObject: nmdc:95c48f4d9521498ef6666739e4c55696 -INFO:root:PassingDataObject: nmdc:ba7af750da839fc2c094d62327e55fa4 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138736 INFO:root:found 1 records INFO:root:record: nmdc:b913e27411681a940dd6ba32dba07d09, MAGs Analysis Activity for nmdc:mga0gt36 INFO:root:PassingDataObject: nmdc:b840f22de32b13e90b128d4f1448012b INFO:root:PassingDataObject: nmdc:b09e982b9d6f3ee0dc49048ca38b0088 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138736 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-5yy9k739 INFO:root:legacy_id: gold:Gp0138733 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-5yy9k739 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:57bd602fa807024237878435a358d136 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138733 INFO:root:found 1 records INFO:root:record: nmdc:8b893c6adec9b20905ae26e886f077d7, Read QC Activity for nmdc:mga0vd86 -INFO:root:PassingDataObject: nmdc:3eb1dd5fa7a7929d4219c96eacfef6ea INFO:root:PassingDataObject: nmdc:ea876cea354a2d5fda97651cb9741d94 +INFO:root:PassingDataObject: nmdc:3eb1dd5fa7a7929d4219c96eacfef6ea INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138733 INFO:root:found 1 records INFO:root:record: nmdc:8b893c6adec9b20905ae26e886f077d7, ReadBased Analysis Activity for nmdc:mga0vd86 -INFO:root:PassingDataObject: nmdc:4e43ac2b9303f3360570a906ad041ed7 +INFO:root:PassingDataObject: nmdc:329c66c52b773c8668a4d3b0790c599c +INFO:root:PassingDataObject: nmdc:b64c8f7063313787ff247ef0262a8aec INFO:root:PassingDataObject: nmdc:88cb95d5dcac01adf30dac966bae9a55 -INFO:root:PassingDataObject: nmdc:49919109da7a01549be2212d4a4b8a68 INFO:root:PassingDataObject: nmdc:f0d619bb56c7393d4e4f55ff535d2647 -INFO:root:PassingDataObject: nmdc:b64c8f7063313787ff247ef0262a8aec -INFO:root:PassingDataObject: nmdc:329c66c52b773c8668a4d3b0790c599c +INFO:root:PassingDataObject: nmdc:4e43ac2b9303f3360570a906ad041ed7 INFO:root:PassingDataObject: nmdc:770eea8234443b382b0c39bcd8d054de INFO:root:PassingDataObject: nmdc:41a235a0bf73ce773fa4181dbb338049 INFO:root:PassingDataObject: nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 +INFO:root:PassingDataObject: nmdc:49919109da7a01549be2212d4a4b8a68 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138733 INFO:root:found 1 records INFO:root:record: nmdc:8b893c6adec9b20905ae26e886f077d7, Assembly Activity for nmdc:mga0vd86 INFO:root:PassingDataObject: nmdc:2c417efe47a036338b8a49611337f9db -INFO:root:PassingDataObject: nmdc:2809e8e79869a8e41acac3f5b2ad207f -INFO:root:PassingDataObject: nmdc:d04492608b77610683e34a7936955948 INFO:root:PassingDataObject: nmdc:cbd18d892fd1c6a852a7273930aa9cd1 +INFO:root:PassingDataObject: nmdc:2809e8e79869a8e41acac3f5b2ad207f INFO:root:PassingDataObject: nmdc:6c0e1781197cfa53b82aef7024b3e9ab +INFO:root:PassingDataObject: nmdc:d04492608b77610683e34a7936955948 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138733 INFO:root:found 1 records INFO:root:record: nmdc:8b893c6adec9b20905ae26e886f077d7, Annotation Activity for nmdc:mga0vd86 -INFO:root:PassingDataObject: nmdc:e8afd054e3dbf529209f955a252e1030 INFO:root:PassingDataObject: nmdc:81b4a85c10523d5717a048aa467577db -INFO:root:PassingDataObject: nmdc:1d8033cd8e6b74e859d827af874f6bf6 -INFO:root:PassingDataObject: nmdc:85938ae390fa8f23734a6643877db502 -INFO:root:PassingDataObject: nmdc:76beb2450ea9671de58e938fe90ced88 +INFO:root:PassingDataObject: nmdc:bc09761c459f25952253a46e1bb334a1 INFO:root:PassingDataObject: nmdc:8602ac20e0f87bd10f0e9a2fda8154eb -INFO:root:PassingDataObject: nmdc:b82200ebb9d5cd62161d23f3f8c111df -INFO:root:PassingDataObject: nmdc:aa4ce55296834496f19a5e3525cedf73 -INFO:root:PassingDataObject: nmdc:116ee0c2a310ae864cd6a3405e002f76 INFO:root:PassingDataObject: nmdc:a6a78267b363863a9a2fc67c5459669f +INFO:root:PassingDataObject: nmdc:e8afd054e3dbf529209f955a252e1030 +INFO:root:PassingDataObject: nmdc:323986038fa2791de9c97d28ee5bd070 +INFO:root:PassingDataObject: nmdc:0bd8a9645b72e24282f7b41cf1483e6a INFO:root:PassingDataObject: nmdc:6541212d9cc7b2b3415ff0053bdeb310 +INFO:root:PassingDataObject: nmdc:1d8033cd8e6b74e859d827af874f6bf6 +INFO:root:PassingDataObject: nmdc:116ee0c2a310ae864cd6a3405e002f76 INFO:root:PassingDataObject: nmdc:71dee7fa9a220e524595a3a5244d8e67 -INFO:root:PassingDataObject: nmdc:bc09761c459f25952253a46e1bb334a1 -INFO:root:PassingDataObject: nmdc:f069bf3e61bc25b7317b034e9c44641a INFO:root:PassingDataObject: nmdc:049fef6c097c89c561ecaf8c14b289f2 INFO:root:PassingDataObject: nmdc:1dd8791ad0f621c7cde783e6038ee023 -INFO:root:PassingDataObject: nmdc:323986038fa2791de9c97d28ee5bd070 INFO:root:PassingDataObject: nmdc:185f918733324acae3ed6dfb3491fae9 -INFO:root:PassingDataObject: nmdc:0bd8a9645b72e24282f7b41cf1483e6a +INFO:root:PassingDataObject: nmdc:f069bf3e61bc25b7317b034e9c44641a +INFO:root:PassingDataObject: nmdc:85938ae390fa8f23734a6643877db502 +INFO:root:PassingDataObject: nmdc:76beb2450ea9671de58e938fe90ced88 +INFO:root:PassingDataObject: nmdc:b82200ebb9d5cd62161d23f3f8c111df +INFO:root:PassingDataObject: nmdc:aa4ce55296834496f19a5e3525cedf73 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138733 INFO:root:found 1 records INFO:root:record: nmdc:8b893c6adec9b20905ae26e886f077d7, MAGs Analysis Activity for nmdc:mga0vd86 -INFO:root:PassingDataObject: nmdc:41c0169824223d9bd255e0e83b8a6fdd INFO:root:PassingDataObject: nmdc:af6bbfe74cde1e51a97c088e5aeb2b84 +INFO:root:PassingDataObject: nmdc:41c0169824223d9bd255e0e83b8a6fdd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138733 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-2d16h818 INFO:root:legacy_id: gold:Gp0138737 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-2d16h818 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:72779f8c6bba0a95693c89a92f4f6be3 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, Read QC Activity for nmdc:mga0ss48 INFO:root:PassingDataObject: nmdc:47619b9fb6a7465e25999a80826badac INFO:root:PassingDataObject: nmdc:1be9f83589f61265354476e3f6ccae9c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, ReadBased Analysis Activity for nmdc:mga0ss48 -INFO:root:PassingDataObject: nmdc:bd95e847cee60ace057d8d2836e42ef3 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:761f287faac154a3b66a0c89c82738d4 -ERROR:root:FailedDataObject: nmdc:226fbcb31623f7107db51f81ef175254, +INFO:root:PassingDataObject: nmdc:226fbcb31623f7107db51f81ef175254 +INFO:root:PassingDataObject: nmdc:e98f2738bfbcfb7022f19be0e5166329 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:761f287faac154a3b66a0c89c82738d4 ERROR:root:FailedDataObject: nmdc:a0b323f90d0b4cf4466a3225d4467616, -ERROR:root:FailedDataObject: nmdc:e98f2738bfbcfb7022f19be0e5166329, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:761f287faac154a3b66a0c89c82738d4 ERROR:root:FailedDataObject: nmdc:0b6fc695e680e2b28cffedf497701786, -ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:761f287faac154a3b66a0c89c82738d4 ERROR:root:FailedDataObject: nmdc:850ba40eb4e0d048a4dedd97f738a76d, +ERROR:root:FailedDataObject: nmdc:bd95e847cee60ace057d8d2836e42ef3, ERROR:root:FailedDataObject: nmdc:6213c5e468e7fe9212b47a00f5583dd6, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:761f287faac154a3b66a0c89c82738d4, ReadBased Analysis Activity for nmdc:mga0ss48 @@ -643,250 +714,275 @@ ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, Assembly Activity for nmdc:mga0ss48 -INFO:root:PassingDataObject: nmdc:231f54f3e5e77afa18423c42fcc3857d +INFO:root:PassingDataObject: nmdc:1c823f4d6dac3f35df41448f2de60e69 INFO:root:PassingDataObject: nmdc:90f5744d23efa69f005b0cb8377127b1 -INFO:root:PassingDataObject: nmdc:56e60e4a5424e7d07b1dba85b8013a04 +INFO:root:PassingDataObject: nmdc:231f54f3e5e77afa18423c42fcc3857d INFO:root:PassingDataObject: nmdc:81e045c32f418f2b5a62e22902e60a6f -INFO:root:PassingDataObject: nmdc:1c823f4d6dac3f35df41448f2de60e69 +INFO:root:PassingDataObject: nmdc:56e60e4a5424e7d07b1dba85b8013a04 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, Annotation Activity for nmdc:mga0ss48 -INFO:root:PassingDataObject: nmdc:726bf715a351123ab93c3edb04e02eab -INFO:root:PassingDataObject: nmdc:81a2de9e9a3a0bf39b805f2dea6892f6 -INFO:root:PassingDataObject: nmdc:d236a317e488b24552fc77c62d7ffaf1 -INFO:root:PassingDataObject: nmdc:e25b7b92d87b68f28099cb4c21810a47 -INFO:root:PassingDataObject: nmdc:62b205ed5ad0347a0da49263cd6063aa +INFO:root:PassingDataObject: nmdc:a5d9ee0a72031b866fff06f0f9a90edf INFO:root:PassingDataObject: nmdc:3f0984b891f748f8f59f149cd47cff1d -INFO:root:PassingDataObject: nmdc:47fd3d7465f923567354f7c7f97800dd -INFO:root:PassingDataObject: nmdc:911a0446f7504751a8b84c573ccb3833 +INFO:root:PassingDataObject: nmdc:25d6e3d7f8e47fed95ea618beaad6d09 INFO:root:PassingDataObject: nmdc:20ecb5c90f54b5f3485671cd46b2e080 -INFO:root:PassingDataObject: nmdc:a5d9ee0a72031b866fff06f0f9a90edf -INFO:root:PassingDataObject: nmdc:db3783da4bfbafc0455be4dbefda6441 +INFO:root:PassingDataObject: nmdc:c9c0ae18877d5dfb5a458bddf9d5c10e +INFO:root:PassingDataObject: nmdc:47fd3d7465f923567354f7c7f97800dd +INFO:root:PassingDataObject: nmdc:d2b14706623498c7c8fdbfa20f1148f0 +INFO:root:PassingDataObject: nmdc:d236a317e488b24552fc77c62d7ffaf1 +INFO:root:PassingDataObject: nmdc:26765704d44f117a047d88408c28429c INFO:root:PassingDataObject: nmdc:36796c11964b86c7bc45151f77d037e8 +INFO:root:PassingDataObject: nmdc:81a2de9e9a3a0bf39b805f2dea6892f6 INFO:root:PassingDataObject: nmdc:6bb13b15cb95497cc41de5d5edb9d438 +INFO:root:PassingDataObject: nmdc:62b205ed5ad0347a0da49263cd6063aa +INFO:root:PassingDataObject: nmdc:e25b7b92d87b68f28099cb4c21810a47 INFO:root:PassingDataObject: nmdc:f3ba8c76937d04cba63db9010ff5e47f -INFO:root:PassingDataObject: nmdc:25d6e3d7f8e47fed95ea618beaad6d09 +INFO:root:PassingDataObject: nmdc:db3783da4bfbafc0455be4dbefda6441 +INFO:root:PassingDataObject: nmdc:911a0446f7504751a8b84c573ccb3833 +INFO:root:PassingDataObject: nmdc:726bf715a351123ab93c3edb04e02eab INFO:root:PassingDataObject: nmdc:93b052c99b076b0a9b88891308821040 -INFO:root:PassingDataObject: nmdc:c9c0ae18877d5dfb5a458bddf9d5c10e -INFO:root:PassingDataObject: nmdc:d2b14706623498c7c8fdbfa20f1148f0 -INFO:root:PassingDataObject: nmdc:26765704d44f117a047d88408c28429c INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138737 INFO:root:found 1 records INFO:root:record: nmdc:761f287faac154a3b66a0c89c82738d4, MAGs Analysis Activity for nmdc:mga0ss48 INFO:root:PassingDataObject: nmdc:6acd7e1bf30f8b50c7a11926a76dc6c9 INFO:root:PassingDataObject: nmdc:95e26dfcf4a8deadd84f123b84f48e0d INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138737 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-85jsxt33 INFO:root:legacy_id: gold:Gp0138740 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-85jsxt33 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0f65059f9df59fe318f2780fc2e0605d INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138740 INFO:root:found 1 records INFO:root:record: nmdc:8253bcdcd0387177ff895c38a047c719, Read QC Activity for nmdc:mga0wa96 -INFO:root:PassingDataObject: nmdc:5ca80874470cd418dce76a684ca9e7d8 INFO:root:PassingDataObject: nmdc:5e9f01140cda71a4be6fbb9fba896d38 +INFO:root:PassingDataObject: nmdc:5ca80874470cd418dce76a684ca9e7d8 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138740 INFO:root:found 1 records INFO:root:record: nmdc:8253bcdcd0387177ff895c38a047c719, ReadBased Analysis Activity for nmdc:mga0wa96 +INFO:root:PassingDataObject: nmdc:f5351ea13159feff2d0198a0da29c8a5 +INFO:root:PassingDataObject: nmdc:0772b0a1db633615098d8805d70bc46f +INFO:root:PassingDataObject: nmdc:a051f2d528db2c3d027e40f580724536 +INFO:root:PassingDataObject: nmdc:4beca79435164e92624ade0095a6f28f INFO:root:PassingDataObject: nmdc:339c0d5d2e73387fb9ef43b6a9b20da4 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:8253bcdcd0387177ff895c38a047c719 -ERROR:root:FailedDataObject: nmdc:e320964bdde1bf5d0ed42c874431a09f, -ERROR:root:FailedDataObject: nmdc:a051f2d528db2c3d027e40f580724536, -ERROR:root:FailedDataObject: nmdc:f5351ea13159feff2d0198a0da29c8a5, -ERROR:root:FailedDataObject: nmdc:99b68ca9274dd5c8c15a727d8a4be5c1, +INFO:root:PassingDataObject: nmdc:e320964bdde1bf5d0ed42c874431a09f ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:8253bcdcd0387177ff895c38a047c719 -ERROR:root:FailedDataObject: nmdc:4beca79435164e92624ade0095a6f28f, -ERROR:root:FailedDataObject: nmdc:0772b0a1db633615098d8805d70bc46f, +ERROR:root:FailedDataObject: nmdc:99b68ca9274dd5c8c15a727d8a4be5c1, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:8253bcdcd0387177ff895c38a047c719 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:8253bcdcd0387177ff895c38a047c719, ReadBased Analysis Activity for nmdc:mga0wa96 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138740 INFO:root:found 1 records INFO:root:record: nmdc:8253bcdcd0387177ff895c38a047c719, Assembly Activity for nmdc:mga0wa96 -INFO:root:PassingDataObject: nmdc:9c7f00ab9890b52eadf20c168496f65e +INFO:root:PassingDataObject: nmdc:e50cf5553a7a06a03424a5123ba0dabc INFO:root:PassingDataObject: nmdc:4f20a2e7cc9051159641ca5147fc7382 INFO:root:PassingDataObject: nmdc:c72608f8b3bd84bf80868d30e02aab72 -INFO:root:PassingDataObject: nmdc:e50cf5553a7a06a03424a5123ba0dabc +INFO:root:PassingDataObject: nmdc:9c7f00ab9890b52eadf20c168496f65e INFO:root:PassingDataObject: nmdc:9fd9e4c2052840e335bf4dd7dc1a836c INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138740 INFO:root:found 1 records INFO:root:record: nmdc:8253bcdcd0387177ff895c38a047c719, Annotation Activity for nmdc:mga0wa96 -INFO:root:PassingDataObject: nmdc:5171d0c088015720cd216846f4066a72 -INFO:root:PassingDataObject: nmdc:ed02438e8bebd44e59b492511a08678e -INFO:root:PassingDataObject: nmdc:50bd0bb4c2f99f4e0904a486096615db -INFO:root:PassingDataObject: nmdc:003fe178e2ef974bf3a0d30f5bebbba2 -INFO:root:PassingDataObject: nmdc:3ccffa0f1685fbe09757f60d14a64d1d -INFO:root:PassingDataObject: nmdc:93ae523450f54e6522dc754534a9362c -INFO:root:PassingDataObject: nmdc:bf8e8b6f87834f5d948853c611f20e8a +INFO:root:PassingDataObject: nmdc:8e3f4a31cffaa5ed16720dd2cc307cfe INFO:root:PassingDataObject: nmdc:41798fb9f46e5a1f0b197e1a6e51f512 +INFO:root:PassingDataObject: nmdc:5171d0c088015720cd216846f4066a72 INFO:root:PassingDataObject: nmdc:74bc387b3c1997a2ef32a73dafbb0d99 -INFO:root:PassingDataObject: nmdc:3677b510d260307cc90b6fda8c5cd269 -INFO:root:PassingDataObject: nmdc:3c201ceb9c4aedbcd7cde221464dce84 -INFO:root:PassingDataObject: nmdc:4b1f0a35b5a360144bb20c1df719b4b5 +INFO:root:PassingDataObject: nmdc:93ae523450f54e6522dc754534a9362c INFO:root:PassingDataObject: nmdc:bf05b81e80a02b38d0d211d58f2d413b +INFO:root:PassingDataObject: nmdc:3677b510d260307cc90b6fda8c5cd269 +INFO:root:PassingDataObject: nmdc:ed02438e8bebd44e59b492511a08678e INFO:root:PassingDataObject: nmdc:38657fd9c98fd102f766053eb8d93a2c -INFO:root:PassingDataObject: nmdc:5d1a8ba5117b170cca6c27fca703c3a5 -INFO:root:PassingDataObject: nmdc:54493de90db3c8b1b0072d9beb89b6d1 INFO:root:PassingDataObject: nmdc:05946b88835fbe867d6f2f535d28429b -INFO:root:PassingDataObject: nmdc:8e3f4a31cffaa5ed16720dd2cc307cfe +INFO:root:PassingDataObject: nmdc:bf8e8b6f87834f5d948853c611f20e8a INFO:root:PassingDataObject: nmdc:17f84865341a0bd90d493f3fda754e05 +INFO:root:PassingDataObject: nmdc:3ccffa0f1685fbe09757f60d14a64d1d +INFO:root:PassingDataObject: nmdc:50bd0bb4c2f99f4e0904a486096615db +INFO:root:PassingDataObject: nmdc:54493de90db3c8b1b0072d9beb89b6d1 +INFO:root:PassingDataObject: nmdc:5d1a8ba5117b170cca6c27fca703c3a5 +INFO:root:PassingDataObject: nmdc:3c201ceb9c4aedbcd7cde221464dce84 +INFO:root:PassingDataObject: nmdc:4b1f0a35b5a360144bb20c1df719b4b5 +INFO:root:PassingDataObject: nmdc:003fe178e2ef974bf3a0d30f5bebbba2 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138740 INFO:root:found 1 records INFO:root:record: nmdc:8253bcdcd0387177ff895c38a047c719, MAGs Analysis Activity for nmdc:mga0wa96 INFO:root:PassingDataObject: nmdc:54455258355d2b2bc695d61a652b755d INFO:root:PassingDataObject: nmdc:d4ad44a1c826386d0bd6abbf65a3ac88 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138740 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-d6c4q479 INFO:root:legacy_id: gold:Gp0138741 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-d6c4q479 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:65b806917315e7518fdd36887bca0190 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138741 INFO:root:found 1 records INFO:root:record: nmdc:7a197d54a06a37090bb50eaf37c93115, Read QC Activity for nmdc:mga0tq55 INFO:root:PassingDataObject: nmdc:d75540d565682d791dc45298f9de54fc INFO:root:PassingDataObject: nmdc:9333de207aace2cea9ea955e88bdec9b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138741 INFO:root:found 1 records INFO:root:record: nmdc:7a197d54a06a37090bb50eaf37c93115, ReadBased Analysis Activity for nmdc:mga0tq55 +INFO:root:PassingDataObject: nmdc:4e6cf38af0b5b8f16d8fc1f7779c5a29 +INFO:root:PassingDataObject: nmdc:1ffe29c4f789e512f13b81b684fcf61e +INFO:root:PassingDataObject: nmdc:e333f1a4984287f28b1ec6bc2f5e220f +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:7a197d54a06a37090bb50eaf37c93115 +ERROR:root:FailedDataObject: nmdc:bf95f667ae01fcec06e7965d922f63c3, ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:7a197d54a06a37090bb50eaf37c93115 ERROR:root:FailedDataObject: nmdc:3bc683ffe2c367faf6e6ae90087e0410, -ERROR:root:FailedDataObject: nmdc:bf95f667ae01fcec06e7965d922f63c3, ERROR:root:FailedDataObject: nmdc:f7454a9a53391dd69116eaa495972281, -ERROR:root:FailedDataObject: nmdc:4e6cf38af0b5b8f16d8fc1f7779c5a29, -ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:7a197d54a06a37090bb50eaf37c93115 -ERROR:root:FailedDataObject: nmdc:1ffe29c4f789e512f13b81b684fcf61e, ERROR:root:FailedDataObject: nmdc:d915cd752473ca2dee362b6f5d6463f9, -ERROR:root:FailedDataObject: nmdc:e333f1a4984287f28b1ec6bc2f5e220f, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7a197d54a06a37090bb50eaf37c93115, ReadBased Analysis Activity for nmdc:mga0tq55 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138741 INFO:root:found 1 records INFO:root:record: nmdc:7a197d54a06a37090bb50eaf37c93115, Assembly Activity for nmdc:mga0tq55 -INFO:root:PassingDataObject: nmdc:165d07a310f116f21e4a3cb1d2f9001e INFO:root:PassingDataObject: nmdc:c770451eda4fa76c8f06e4eac0cb5800 +INFO:root:PassingDataObject: nmdc:165d07a310f116f21e4a3cb1d2f9001e INFO:root:PassingDataObject: nmdc:58c1cb4a44fddf66e9805298fa4b53e2 -INFO:root:PassingDataObject: nmdc:eeaca1069da3f994467936972ebc4a79 INFO:root:PassingDataObject: nmdc:5352457da0e9bb72bf0ae6088939908d +INFO:root:PassingDataObject: nmdc:eeaca1069da3f994467936972ebc4a79 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138741 INFO:root:found 1 records INFO:root:record: nmdc:7a197d54a06a37090bb50eaf37c93115, Annotation Activity for nmdc:mga0tq55 +INFO:root:PassingDataObject: nmdc:f841ad5bad65cb6102613fb116910ddb +INFO:root:PassingDataObject: nmdc:4327174ad1618018feb88d769a056af4 +INFO:root:PassingDataObject: nmdc:8d57364c66c0db773c35fdcc3d4d245d INFO:root:PassingDataObject: nmdc:9870575bfbaa5f825e9c592f96353994 -INFO:root:PassingDataObject: nmdc:94f91e2ce07a9ea76bff7b315d598fe4 +INFO:root:PassingDataObject: nmdc:ad08f8176e5097538ebda0c1baaeeb4d +INFO:root:PassingDataObject: nmdc:7f4f16cacad465a86d5fecf743ddc086 INFO:root:PassingDataObject: nmdc:a0c607758679498cf366feb4f856de58 -INFO:root:PassingDataObject: nmdc:2a365551bc9e238a0229d806792d0b0d -INFO:root:PassingDataObject: nmdc:be978b1c2c9828ea440707e1a01069d6 INFO:root:PassingDataObject: nmdc:3b7958095417ea34a7a946545f173f82 -INFO:root:PassingDataObject: nmdc:4327174ad1618018feb88d769a056af4 -INFO:root:PassingDataObject: nmdc:f841ad5bad65cb6102613fb116910ddb +INFO:root:PassingDataObject: nmdc:be978b1c2c9828ea440707e1a01069d6 +INFO:root:PassingDataObject: nmdc:94f91e2ce07a9ea76bff7b315d598fe4 INFO:root:PassingDataObject: nmdc:7b3f59bcfee1a9c3156f36051cf616fd INFO:root:PassingDataObject: nmdc:257bc76d56c0c71a360332b8a00de230 -INFO:root:PassingDataObject: nmdc:48fbc9a98c0027f1316d34f86543ce6c -INFO:root:PassingDataObject: nmdc:7f4f16cacad465a86d5fecf743ddc086 -INFO:root:PassingDataObject: nmdc:5da31fee870b6f0594b3a5bb937a48cc -INFO:root:PassingDataObject: nmdc:8d57364c66c0db773c35fdcc3d4d245d INFO:root:PassingDataObject: nmdc:2436d215e74129b5f8d9f2175debba91 INFO:root:PassingDataObject: nmdc:bf09fb899dfd022f91d6257e25af18ef -INFO:root:PassingDataObject: nmdc:ad08f8176e5097538ebda0c1baaeeb4d INFO:root:PassingDataObject: nmdc:17f3687453f35040de7e8686d3c902d2 +INFO:root:PassingDataObject: nmdc:5da31fee870b6f0594b3a5bb937a48cc +INFO:root:PassingDataObject: nmdc:2a365551bc9e238a0229d806792d0b0d INFO:root:PassingDataObject: nmdc:3638f7b2afecb282ab8cb3ec296e6c4c +INFO:root:PassingDataObject: nmdc:48fbc9a98c0027f1316d34f86543ce6c INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138741 INFO:root:found 1 records INFO:root:record: nmdc:7a197d54a06a37090bb50eaf37c93115, MAGs Analysis Activity for nmdc:mga0tq55 -INFO:root:PassingDataObject: nmdc:e3a5bec33f45bbff83eb4b4bfbab5deb INFO:root:PassingDataObject: nmdc:54e6da9f671887ac2ba005fc4c9d70c1 +INFO:root:PassingDataObject: nmdc:e3a5bec33f45bbff83eb4b4bfbab5deb INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138741 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-keywj942 INFO:root:legacy_id: gold:Gp0138742 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-keywj942 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a198c6e6ba43f210857ca41f25e0ed10 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, Read QC Activity for nmdc:mga00971 -INFO:root:PassingDataObject: nmdc:8f5c7328eecd18d4989fb101e8d1188a INFO:root:PassingDataObject: nmdc:7b28549eff41c93c582b5e3c86ffb722 +INFO:root:PassingDataObject: nmdc:8f5c7328eecd18d4989fb101e8d1188a INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, ReadBased Analysis Activity for nmdc:mga00971 -INFO:root:PassingDataObject: nmdc:777ba469c171b72a370b3574aa51698b -INFO:root:PassingDataObject: nmdc:6eddef8b7922a4ee66e1c929e662fb44 -INFO:root:PassingDataObject: nmdc:8501f826e986b8c96cfa0f1fc3b95664 -INFO:root:PassingDataObject: nmdc:4fe35f89a855453d3f6c7a3429e35d02 -INFO:root:PassingDataObject: nmdc:bd13ac21b6f0a108144db9d5e73dce51 -INFO:root:PassingDataObject: nmdc:7ae79531a0268d93cb8251e3397609a3 INFO:root:PassingDataObject: nmdc:9139fb2f1cafb0e7a29de83443d89df6 +INFO:root:PassingDataObject: nmdc:bd13ac21b6f0a108144db9d5e73dce51 INFO:root:PassingDataObject: nmdc:fd42771008a5df5cacdc5cbe3cb296d6 +INFO:root:PassingDataObject: nmdc:7ae79531a0268d93cb8251e3397609a3 +INFO:root:PassingDataObject: nmdc:4fe35f89a855453d3f6c7a3429e35d02 INFO:root:PassingDataObject: nmdc:7c470106d10e95c1834c089f94607bed +INFO:root:PassingDataObject: nmdc:8501f826e986b8c96cfa0f1fc3b95664 +INFO:root:PassingDataObject: nmdc:6eddef8b7922a4ee66e1c929e662fb44 +INFO:root:PassingDataObject: nmdc:777ba469c171b72a370b3574aa51698b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, Assembly Activity for nmdc:mga00971 -INFO:root:PassingDataObject: nmdc:18a7268d072a2d6a817f40573167bbac -INFO:root:PassingDataObject: nmdc:f0cbbb5775ed6286652ceae5351c2cf9 -INFO:root:PassingDataObject: nmdc:474a282db436e36825592becc05c375b INFO:root:PassingDataObject: nmdc:2154ce589183eb8a7b4d32a2647772e8 +INFO:root:PassingDataObject: nmdc:f0cbbb5775ed6286652ceae5351c2cf9 +INFO:root:PassingDataObject: nmdc:18a7268d072a2d6a817f40573167bbac INFO:root:PassingDataObject: nmdc:ce78f79a3d3b02bb500ff0d58e124cda +INFO:root:PassingDataObject: nmdc:474a282db436e36825592becc05c375b INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, Annotation Activity for nmdc:mga00971 -INFO:root:PassingDataObject: nmdc:8e28d4ae4513dfe9c2269e15093d6165 -INFO:root:PassingDataObject: nmdc:47b332fd6f21603209d4f493b1e42a6f -INFO:root:PassingDataObject: nmdc:2a8ce79f6f4217c0e4a213f8023810d8 -INFO:root:PassingDataObject: nmdc:965cf5a13764ee91b7305127884f5950 -INFO:root:PassingDataObject: nmdc:fe275c8706f1992fc3c95ae4561a30d9 +INFO:root:PassingDataObject: nmdc:ef5249f7c6136638049150ea54eb89b1 +INFO:root:PassingDataObject: nmdc:dbabffe4aac7483f168d92b5cf7a28a1 INFO:root:PassingDataObject: nmdc:a04e9fd6a0fe3952944a24f7892264dc INFO:root:PassingDataObject: nmdc:19b849f080718bdb0d8dbeb2ce01fa67 -INFO:root:PassingDataObject: nmdc:8f47c8251f6770702754c466ce9d2868 -INFO:root:PassingDataObject: nmdc:bb0b98a7aed89a4c05d65f6897ad95a6 -INFO:root:PassingDataObject: nmdc:0f8b1cbc658040f24f66294f4d4306a9 INFO:root:PassingDataObject: nmdc:c4a823de834cf97a6f52971d49497988 -INFO:root:PassingDataObject: nmdc:dbabffe4aac7483f168d92b5cf7a28a1 -INFO:root:PassingDataObject: nmdc:ef5249f7c6136638049150ea54eb89b1 -INFO:root:PassingDataObject: nmdc:6044ce8f94fb006e642987384ea60126 -INFO:root:PassingDataObject: nmdc:360c2606213879f89bcb2dcbc406d4b9 +INFO:root:PassingDataObject: nmdc:2a8ce79f6f4217c0e4a213f8023810d8 +INFO:root:PassingDataObject: nmdc:8e28d4ae4513dfe9c2269e15093d6165 +INFO:root:PassingDataObject: nmdc:47b332fd6f21603209d4f493b1e42a6f +INFO:root:PassingDataObject: nmdc:bb0b98a7aed89a4c05d65f6897ad95a6 INFO:root:PassingDataObject: nmdc:3995dba8cef26ae414538e88e49c3f01 -INFO:root:PassingDataObject: nmdc:4f001c776b4cc3c1018fbc4349aed5d5 +INFO:root:PassingDataObject: nmdc:360c2606213879f89bcb2dcbc406d4b9 INFO:root:PassingDataObject: nmdc:2f0cdbf5db2bef3ef6949b2b46a86a55 +INFO:root:PassingDataObject: nmdc:8f47c8251f6770702754c466ce9d2868 +INFO:root:PassingDataObject: nmdc:6044ce8f94fb006e642987384ea60126 INFO:root:PassingDataObject: nmdc:f138de342b75111237cc7b0fff78e88b +INFO:root:PassingDataObject: nmdc:0f8b1cbc658040f24f66294f4d4306a9 +INFO:root:PassingDataObject: nmdc:fe275c8706f1992fc3c95ae4561a30d9 +INFO:root:PassingDataObject: nmdc:965cf5a13764ee91b7305127884f5950 +INFO:root:PassingDataObject: nmdc:4f001c776b4cc3c1018fbc4349aed5d5 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138742 INFO:root:found 1 records INFO:root:record: nmdc:f418c728a009dc1de4528dc5b990e405, MAGs Analysis Activity for nmdc:mga00971 INFO:root:PassingDataObject: nmdc:e2e1a52c33565fb44e640f53da1d5ea8 INFO:root:PassingDataObject: nmdc:4db2606221f9dc08aac305a08470aec0 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138742 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-bzxddj92 INFO:root:legacy_id: gold:Gp0138738 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-bzxddj92 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:38116da337f1e868ba6fec5a184ba2fc INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138738 INFO:root:found 1 records INFO:root:record: nmdc:5ab2faba70b7dc9853cecf68af4576c8, Read QC Activity for nmdc:mga09t29 -INFO:root:PassingDataObject: nmdc:9f69990b0ca36244479b8e2cf5059a2b INFO:root:PassingDataObject: nmdc:6de02a2206630c8fa68f47f67235c3ce +INFO:root:PassingDataObject: nmdc:9f69990b0ca36244479b8e2cf5059a2b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138738 INFO:root:found 1 records INFO:root:record: nmdc:5ab2faba70b7dc9853cecf68af4576c8, ReadBased Analysis Activity for nmdc:mga09t29 +INFO:root:PassingDataObject: nmdc:268db5579721a196c95872bf480e4329 +INFO:root:PassingDataObject: nmdc:b15dfe140998e9c1364ef5299b4b86d2 +INFO:root:PassingDataObject: nmdc:50958da5af250342f2089bec02364e12 INFO:root:PassingDataObject: nmdc:97d9170806e02d05bfdf2b1fecdda547 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:5ab2faba70b7dc9853cecf68af4576c8 -ERROR:root:FailedDataObject: nmdc:fa5dfe9d5ceb255bd4568badb0cc811b, -ERROR:root:FailedDataObject: nmdc:b15dfe140998e9c1364ef5299b4b86d2, -ERROR:root:FailedDataObject: nmdc:50958da5af250342f2089bec02364e12, +INFO:root:PassingDataObject: nmdc:001e0726d6f7e54706f445f568de1fd9 +INFO:root:PassingDataObject: nmdc:fa5dfe9d5ceb255bd4568badb0cc811b ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:5ab2faba70b7dc9853cecf68af4576c8 -ERROR:root:FailedDataObject: nmdc:268db5579721a196c95872bf480e4329, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:5ab2faba70b7dc9853cecf68af4576c8 ERROR:root:FailedDataObject: nmdc:ece64e0755d738464f01e5af77732ee1, -ERROR:root:FailedDataObject: nmdc:001e0726d6f7e54706f445f568de1fd9, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5ab2faba70b7dc9853cecf68af4576c8, ReadBased Analysis Activity for nmdc:mga09t29 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 @@ -894,125 +990,137 @@ INFO:root:set_name: metagenome_assembly_set for gold:Gp0138738 INFO:root:found 1 records INFO:root:record: nmdc:5ab2faba70b7dc9853cecf68af4576c8, Assembly Activity for nmdc:mga09t29 INFO:root:PassingDataObject: nmdc:422bde67781e860175c83611a11d317a -INFO:root:PassingDataObject: nmdc:011a494743bdca4d60822bd753d267da -INFO:root:PassingDataObject: nmdc:fd08b76d94a1499d6dccd314d7564fcb INFO:root:PassingDataObject: nmdc:0d11b4879140511f9145b1ff462a7c81 +INFO:root:PassingDataObject: nmdc:011a494743bdca4d60822bd753d267da INFO:root:PassingDataObject: nmdc:824e98c7b6dd7cfb5b35d2c37b7fb0be +INFO:root:PassingDataObject: nmdc:fd08b76d94a1499d6dccd314d7564fcb INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138738 INFO:root:found 1 records INFO:root:record: nmdc:5ab2faba70b7dc9853cecf68af4576c8, Annotation Activity for nmdc:mga09t29 -INFO:root:PassingDataObject: nmdc:056e6b23009f276739d9b41b5915a1b3 -INFO:root:PassingDataObject: nmdc:a82ff6fae87cbc433a7ad3b831c140af -INFO:root:PassingDataObject: nmdc:79c82b42d89f2569dc0b5771aa31709e -INFO:root:PassingDataObject: nmdc:e60fb6f57d31ede551549edc58a7f437 -INFO:root:PassingDataObject: nmdc:e4dca1c95d44427756ec100302ff1b45 -INFO:root:PassingDataObject: nmdc:f59eab589a1d4e5da3826075b38e7a58 +INFO:root:PassingDataObject: nmdc:41d71192142e3f641ec5c459d2cdb714 +INFO:root:PassingDataObject: nmdc:8d6fb6e201cfa7d83dc0b2bb1f1ff4ec INFO:root:PassingDataObject: nmdc:6c3c2b94e738efd60119221bcbca287c +INFO:root:PassingDataObject: nmdc:38c60e2ca253c1e38ffadee7770d74e3 INFO:root:PassingDataObject: nmdc:0aab649c867dda31c6a4dcf4274c08dd INFO:root:PassingDataObject: nmdc:36e269ec0e3018dbd46e6a48570fa212 -INFO:root:PassingDataObject: nmdc:8d6fb6e201cfa7d83dc0b2bb1f1ff4ec -INFO:root:PassingDataObject: nmdc:38c60e2ca253c1e38ffadee7770d74e3 -INFO:root:PassingDataObject: nmdc:bc09cfdf5dca7971a8b8a67c7ab46a5b +INFO:root:PassingDataObject: nmdc:a82ff6fae87cbc433a7ad3b831c140af +INFO:root:PassingDataObject: nmdc:2db6022813f97372dbffe557e4ff51cc +INFO:root:PassingDataObject: nmdc:46722f9f86277ec2635b5076bdc1a11c INFO:root:PassingDataObject: nmdc:b2d9fb2b2448410b870a80dd86302929 +INFO:root:PassingDataObject: nmdc:bc09cfdf5dca7971a8b8a67c7ab46a5b +INFO:root:PassingDataObject: nmdc:79c82b42d89f2569dc0b5771aa31709e +INFO:root:PassingDataObject: nmdc:f043c766925ea9e59ce942fb7358d0de INFO:root:PassingDataObject: nmdc:f21e469991fcd968b8aab09eba8ecc9d -INFO:root:PassingDataObject: nmdc:46722f9f86277ec2635b5076bdc1a11c -INFO:root:PassingDataObject: nmdc:2db6022813f97372dbffe557e4ff51cc -INFO:root:PassingDataObject: nmdc:41d71192142e3f641ec5c459d2cdb714 +INFO:root:PassingDataObject: nmdc:e60fb6f57d31ede551549edc58a7f437 +INFO:root:PassingDataObject: nmdc:f59eab589a1d4e5da3826075b38e7a58 +INFO:root:PassingDataObject: nmdc:056e6b23009f276739d9b41b5915a1b3 INFO:root:PassingDataObject: nmdc:813a8a2ae284b575a59a1fc9bf51afc7 -INFO:root:PassingDataObject: nmdc:f043c766925ea9e59ce942fb7358d0de +INFO:root:PassingDataObject: nmdc:e4dca1c95d44427756ec100302ff1b45 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138738 INFO:root:found 1 records INFO:root:record: nmdc:5ab2faba70b7dc9853cecf68af4576c8, MAGs Analysis Activity for nmdc:mga09t29 INFO:root:PassingDataObject: nmdc:2a0de1af7475a3f5f4b69ffb5a1d5528 INFO:root:PassingDataObject: nmdc:b753c47a6164ff61d72279a62d246ca8 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138738 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-4ptjh074 INFO:root:legacy_id: gold:Gp0138744 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-4ptjh074 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f098da7fe12707ec59757cd2dfb94d26 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, Read QC Activity for nmdc:mga0aj54 INFO:root:PassingDataObject: nmdc:d2bcfe348cd5fd0ea0823f52328fe2f6 INFO:root:PassingDataObject: nmdc:42505d3bc1abb992c5839e8994cc6c86 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, ReadBased Analysis Activity for nmdc:mga0aj54 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:3bbc2e110acd6e6b200fd43814337b94 -ERROR:root:FailedDataObject: nmdc:524bc22a021d7a40aeb134a64416cc8b, -ERROR:root:FailedDataObject: nmdc:f3f5c721edf09670ee391fe8dd3d8af5, -ERROR:root:FailedDataObject: nmdc:5ae72a513af1a9b6c1019bf8f17fdde1, +INFO:root:PassingDataObject: nmdc:5ae72a513af1a9b6c1019bf8f17fdde1 +INFO:root:PassingDataObject: nmdc:08c2b9a09f897ecbe302b8e3f416dd6e +INFO:root:PassingDataObject: nmdc:f3f5c721edf09670ee391fe8dd3d8af5 +INFO:root:PassingDataObject: nmdc:c6ab280a9a71332ea8437846fc5fa70e +INFO:root:PassingDataObject: nmdc:416b6fb7651eb157d2bb3865425bb6de +INFO:root:PassingDataObject: nmdc:524bc22a021d7a40aeb134a64416cc8b ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:3bbc2e110acd6e6b200fd43814337b94 -ERROR:root:FailedDataObject: nmdc:c6ab280a9a71332ea8437846fc5fa70e, -ERROR:root:FailedDataObject: nmdc:08c2b9a09f897ecbe302b8e3f416dd6e, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:3bbc2e110acd6e6b200fd43814337b94 ERROR:root:FailedDataObject: nmdc:273b8d4164abe7092da949a37a8c328d, -ERROR:root:FailedDataObject: nmdc:416b6fb7651eb157d2bb3865425bb6de, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:3bbc2e110acd6e6b200fd43814337b94, ReadBased Analysis Activity for nmdc:mga0aj54 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, Assembly Activity for nmdc:mga0aj54 +INFO:root:PassingDataObject: nmdc:8c7b5026a6eec96bfca8952bc4b5428d +INFO:root:PassingDataObject: nmdc:958b6797d29ca57deaf65e887b454cb5 INFO:root:PassingDataObject: nmdc:ddc6c7a31223f8a9ca4789411e350531 -INFO:root:PassingDataObject: nmdc:f2f329016e730437180ba6eab7235a84 INFO:root:PassingDataObject: nmdc:4ec1e0396d5c08d1e050c1652d784f90 -INFO:root:PassingDataObject: nmdc:958b6797d29ca57deaf65e887b454cb5 -INFO:root:PassingDataObject: nmdc:8c7b5026a6eec96bfca8952bc4b5428d +INFO:root:PassingDataObject: nmdc:f2f329016e730437180ba6eab7235a84 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, Annotation Activity for nmdc:mga0aj54 -INFO:root:PassingDataObject: nmdc:ea89cd2e25979f716ccbd38e3917ca5f -INFO:root:PassingDataObject: nmdc:ba838a40c8f7cb83c7b6b58b892585ae -INFO:root:PassingDataObject: nmdc:cf6fa68e05fb9f50d8af6a0447dabb58 -INFO:root:PassingDataObject: nmdc:4db1bd3e5e7c5e52b5cba46f9b61d134 -INFO:root:PassingDataObject: nmdc:4de43bc8062da919e02349aea67fde69 -INFO:root:PassingDataObject: nmdc:4411a486b86f7ce17c0034c1b2b80781 -INFO:root:PassingDataObject: nmdc:53596a7cb5b2b33600c45912c615ebf5 INFO:root:PassingDataObject: nmdc:e87ae2ba455d63b220b2e617cb222f7d -INFO:root:PassingDataObject: nmdc:fa12b30f6453f99100c6ecab4269e951 -INFO:root:PassingDataObject: nmdc:976ee59d80b5025e98159d2b3fd458d9 -INFO:root:PassingDataObject: nmdc:136bee1d56bc75df5ac449a6c55f0d0d -INFO:root:PassingDataObject: nmdc:447c56fdf72411afb98473b12c4675cf -INFO:root:PassingDataObject: nmdc:952582415dc1b398c37f74a4cabc7860 INFO:root:PassingDataObject: nmdc:702e1e0636bf19e2d193c126ff998822 +INFO:root:PassingDataObject: nmdc:976ee59d80b5025e98159d2b3fd458d9 +INFO:root:PassingDataObject: nmdc:cf6fa68e05fb9f50d8af6a0447dabb58 INFO:root:PassingDataObject: nmdc:2ec02a7d96d67725f13f84c93eac17a8 -INFO:root:PassingDataObject: nmdc:d1b31076f21e432c6e3f4014579c4461 +INFO:root:PassingDataObject: nmdc:952582415dc1b398c37f74a4cabc7860 +INFO:root:PassingDataObject: nmdc:fa12b30f6453f99100c6ecab4269e951 +INFO:root:PassingDataObject: nmdc:46244c24af7307fcdad91e094a354981 INFO:root:PassingDataObject: nmdc:e0774f0c0f4baf71a84eae6be502f90e +INFO:root:PassingDataObject: nmdc:53596a7cb5b2b33600c45912c615ebf5 +INFO:root:PassingDataObject: nmdc:ea89cd2e25979f716ccbd38e3917ca5f INFO:root:PassingDataObject: nmdc:07b6a64c3def2377006b7460a8029451 -INFO:root:PassingDataObject: nmdc:46244c24af7307fcdad91e094a354981 +INFO:root:PassingDataObject: nmdc:ba838a40c8f7cb83c7b6b58b892585ae +INFO:root:PassingDataObject: nmdc:4de43bc8062da919e02349aea67fde69 +INFO:root:PassingDataObject: nmdc:4db1bd3e5e7c5e52b5cba46f9b61d134 +INFO:root:PassingDataObject: nmdc:447c56fdf72411afb98473b12c4675cf +INFO:root:PassingDataObject: nmdc:136bee1d56bc75df5ac449a6c55f0d0d +INFO:root:PassingDataObject: nmdc:4411a486b86f7ce17c0034c1b2b80781 +INFO:root:PassingDataObject: nmdc:d1b31076f21e432c6e3f4014579c4461 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138744 INFO:root:found 1 records INFO:root:record: nmdc:3bbc2e110acd6e6b200fd43814337b94, MAGs Analysis Activity for nmdc:mga0aj54 INFO:root:PassingDataObject: nmdc:f496b531528f5508a8a82cd1d2878ab8 INFO:root:PassingDataObject: nmdc:050b87bd984904881d86de89aee4feda INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138744 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-b2wgvw58 INFO:root:legacy_id: gold:Gp0138746 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-b2wgvw58 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:19edfbb924938737398f443c7342d913 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138746 INFO:root:found 1 records INFO:root:record: nmdc:3c401e2ee440df4d96027e3594618104, Read QC Activity for nmdc:mga0zt51 -INFO:root:PassingDataObject: nmdc:d545791b4aabe329934d489074e8355a INFO:root:PassingDataObject: nmdc:98efa2073a9a68e46fbba39c166f55f3 +INFO:root:PassingDataObject: nmdc:d545791b4aabe329934d489074e8355a INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138746 INFO:root:found 1 records INFO:root:record: nmdc:3c401e2ee440df4d96027e3594618104, ReadBased Analysis Activity for nmdc:mga0zt51 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:3c401e2ee440df4d96027e3594618104 -ERROR:root:FailedDataObject: nmdc:134b632cd3e5bec9cea4c456165d6097, -ERROR:root:FailedDataObject: nmdc:d1bdd8d4605e561039cb3850827b98bd, -ERROR:root:FailedDataObject: nmdc:c108b67654466dd0a54b8bb3fdafa57e, +INFO:root:PassingDataObject: nmdc:134b632cd3e5bec9cea4c456165d6097 +INFO:root:PassingDataObject: nmdc:4ebba69aaf20856dffe47ac5ac672cad +INFO:root:PassingDataObject: nmdc:c108b67654466dd0a54b8bb3fdafa57e +INFO:root:PassingDataObject: nmdc:15ac88a0ee25984da7e44867aa9c07d2 +INFO:root:PassingDataObject: nmdc:4739561177541ad557f80275397e7675 +INFO:root:PassingDataObject: nmdc:d1bdd8d4605e561039cb3850827b98bd ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:3c401e2ee440df4d96027e3594618104 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:3c401e2ee440df4d96027e3594618104 ERROR:root:FailedDataObject: nmdc:cd65e6db9367f66976bd2eebd4b83acb, -ERROR:root:FailedDataObject: nmdc:4739561177541ad557f80275397e7675, -ERROR:root:FailedDataObject: nmdc:4ebba69aaf20856dffe47ac5ac672cad, -ERROR:root:FailedDataObject: nmdc:15ac88a0ee25984da7e44867aa9c07d2, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:3c401e2ee440df4d96027e3594618104, ReadBased Analysis Activity for nmdc:mga0zt51 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 @@ -1020,62 +1128,68 @@ INFO:root:set_name: metagenome_assembly_set for gold:Gp0138746 INFO:root:found 1 records INFO:root:record: nmdc:3c401e2ee440df4d96027e3594618104, Assembly Activity for nmdc:mga0zt51 INFO:root:PassingDataObject: nmdc:2b67bbda2f0dbbeee56f90d9360b615c -INFO:root:PassingDataObject: nmdc:f778360d55e8fb9c7a0d8c3a1ab51632 INFO:root:PassingDataObject: nmdc:efd90d7b508360c3c0e4067cf039f15f -INFO:root:PassingDataObject: nmdc:5fd489af1a69328b86c2d5b1d42ffe57 +INFO:root:PassingDataObject: nmdc:f778360d55e8fb9c7a0d8c3a1ab51632 INFO:root:PassingDataObject: nmdc:7e46c30d89c3d8fbf7007e1dd144e070 +INFO:root:PassingDataObject: nmdc:5fd489af1a69328b86c2d5b1d42ffe57 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138746 INFO:root:found 1 records INFO:root:record: nmdc:3c401e2ee440df4d96027e3594618104, Annotation Activity for nmdc:mga0zt51 +INFO:root:PassingDataObject: nmdc:95f4349d416425cecb9e54fa40e8f08c +INFO:root:PassingDataObject: nmdc:3ee202c9076d6a998f81e4498749095f +INFO:root:PassingDataObject: nmdc:3a792c90abe7c711ecde24bd543c5237 +INFO:root:PassingDataObject: nmdc:abd82397b4fdc2c854e1906278f27002 +INFO:root:PassingDataObject: nmdc:5d2b15ee16b57d59328c5f9ec04b34c3 +INFO:root:PassingDataObject: nmdc:d9af78b42526d166941ce0f2b92e4946 +INFO:root:PassingDataObject: nmdc:aa011778de4d2f547524ed4eaf1747b8 +INFO:root:PassingDataObject: nmdc:f28c02766ae0772d9be72094dbde4b24 INFO:root:PassingDataObject: nmdc:7176e62a03288ff870bdac243e44e311 +INFO:root:PassingDataObject: nmdc:ee3314d3d117cdcdfdbf1127e03b8079 INFO:root:PassingDataObject: nmdc:cab1c5784feea8c0e140a024a0136b41 +INFO:root:PassingDataObject: nmdc:a88a54a401f4416061f9b723cbe5a99b +INFO:root:PassingDataObject: nmdc:3efe965e66a322418941eadf98a4964c +INFO:root:PassingDataObject: nmdc:7cd8fdb30c38a525a05cc0acb7d4fe75 +INFO:root:PassingDataObject: nmdc:0162b13864608d91c76156288c78d354 INFO:root:PassingDataObject: nmdc:83b34703fc84c05080f8f7bb80888e98 INFO:root:PassingDataObject: nmdc:4d6f999a56b77e9ee172c144830b0cae INFO:root:PassingDataObject: nmdc:ce7c172fede745f9524e980bc9721146 -INFO:root:PassingDataObject: nmdc:5d2b15ee16b57d59328c5f9ec04b34c3 -INFO:root:PassingDataObject: nmdc:7cd8fdb30c38a525a05cc0acb7d4fe75 -INFO:root:PassingDataObject: nmdc:95f4349d416425cecb9e54fa40e8f08c -INFO:root:PassingDataObject: nmdc:f28c02766ae0772d9be72094dbde4b24 -INFO:root:PassingDataObject: nmdc:aa011778de4d2f547524ed4eaf1747b8 -INFO:root:PassingDataObject: nmdc:3a792c90abe7c711ecde24bd543c5237 -INFO:root:PassingDataObject: nmdc:0162b13864608d91c76156288c78d354 -INFO:root:PassingDataObject: nmdc:ee3314d3d117cdcdfdbf1127e03b8079 -INFO:root:PassingDataObject: nmdc:d9af78b42526d166941ce0f2b92e4946 INFO:root:PassingDataObject: nmdc:419a9ebd0876d42a2bec86e585869350 -INFO:root:PassingDataObject: nmdc:abd82397b4fdc2c854e1906278f27002 -INFO:root:PassingDataObject: nmdc:3efe965e66a322418941eadf98a4964c -INFO:root:PassingDataObject: nmdc:3ee202c9076d6a998f81e4498749095f -INFO:root:PassingDataObject: nmdc:a88a54a401f4416061f9b723cbe5a99b INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138746 INFO:root:found 1 records INFO:root:record: nmdc:3c401e2ee440df4d96027e3594618104, MAGs Analysis Activity for nmdc:mga0zt51 -INFO:root:PassingDataObject: nmdc:fac991fefe0024b7784905ec59fbfe40 INFO:root:PassingDataObject: nmdc:727f497180a97400c851111340846559 +INFO:root:PassingDataObject: nmdc:fac991fefe0024b7784905ec59fbfe40 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138746 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-0yxa3962 INFO:root:legacy_id: gold:Gp0138748 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-0yxa3962 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2ab91c737308518038e6e4c0925bd12f INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138748 INFO:root:found 1 records INFO:root:record: nmdc:4cbc930855e87f6cc3f2255b875ccade, Read QC Activity for nmdc:mga00098 INFO:root:PassingDataObject: nmdc:c7df8dfccd30a45c2d7451ec028cfe4e INFO:root:PassingDataObject: nmdc:92146e7696d17b02f330767b56bc0b1b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138748 INFO:root:found 1 records INFO:root:record: nmdc:4cbc930855e87f6cc3f2255b875ccade, ReadBased Analysis Activity for nmdc:mga00098 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:4cbc930855e87f6cc3f2255b875ccade -ERROR:root:FailedDataObject: nmdc:f9dd91546ac803303ebd1b86173e3ef5, -ERROR:root:FailedDataObject: nmdc:a0dc69e2ec75448a58992a32eac14426, -ERROR:root:FailedDataObject: nmdc:365db4e689e671081b33051b63444b89, -ERROR:root:FailedDataObject: nmdc:de27878d63c710856c16a202fc2723b0, -ERROR:root:FailedDataObject: nmdc:a3ae4c639da7381b7120bbd255ffa4b2, -ERROR:root:FailedDataObject: nmdc:4b9b8a064ac562bb209a28b9203715e4, +INFO:root:PassingDataObject: nmdc:4b9b8a064ac562bb209a28b9203715e4 +INFO:root:PassingDataObject: nmdc:de27878d63c710856c16a202fc2723b0 +INFO:root:PassingDataObject: nmdc:f9dd91546ac803303ebd1b86173e3ef5 +INFO:root:PassingDataObject: nmdc:365db4e689e671081b33051b63444b89 +INFO:root:PassingDataObject: nmdc:a0dc69e2ec75448a58992a32eac14426 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:4cbc930855e87f6cc3f2255b875ccade ERROR:root:FailedDataObject: nmdc:fd224efc944064e05cf8e2abde80082a, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:4cbc930855e87f6cc3f2255b875ccade +ERROR:root:FailedDataObject: nmdc:a3ae4c639da7381b7120bbd255ffa4b2, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4cbc930855e87f6cc3f2255b875ccade, ReadBased Analysis Activity for nmdc:mga00098 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 @@ -1083,1041 +1197,1157 @@ INFO:root:set_name: metagenome_assembly_set for gold:Gp0138748 INFO:root:found 1 records INFO:root:record: nmdc:4cbc930855e87f6cc3f2255b875ccade, Assembly Activity for nmdc:mga00098 INFO:root:PassingDataObject: nmdc:ece40f6ad4cba50944ba432ed580ccbe -INFO:root:PassingDataObject: nmdc:5247fbeae0759423c738b888ec0e7645 -INFO:root:PassingDataObject: nmdc:a70203a1dd351901ca8661108d133f35 INFO:root:PassingDataObject: nmdc:23180c63164c4420719172addb6fe325 INFO:root:PassingDataObject: nmdc:4a0ad7bf52dbaf125c49bdb6aacb34ad +INFO:root:PassingDataObject: nmdc:5247fbeae0759423c738b888ec0e7645 +INFO:root:PassingDataObject: nmdc:a70203a1dd351901ca8661108d133f35 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138748 INFO:root:found 1 records INFO:root:record: nmdc:4cbc930855e87f6cc3f2255b875ccade, Annotation Activity for nmdc:mga00098 +INFO:root:PassingDataObject: nmdc:c4c1939ccba1a9c2a52c7af3885a29b7 INFO:root:PassingDataObject: nmdc:4d89832b76ef0ac3596bd6ceec314171 +INFO:root:PassingDataObject: nmdc:5627da70e8bf135adbcab46e6330d2c4 +INFO:root:PassingDataObject: nmdc:0b4f4b73f72c7188ac7cffb10a799e69 +INFO:root:PassingDataObject: nmdc:8d4c35cb6cb4b755ff8b96a84e333bd8 INFO:root:PassingDataObject: nmdc:0155f6b65551c71d2445a378d30b89f9 -INFO:root:PassingDataObject: nmdc:e21c5b3530e31e9ef4fc00990fef895a -INFO:root:PassingDataObject: nmdc:64651f29480fe6bc89ea3bdddff65e81 -INFO:root:PassingDataObject: nmdc:b942296473b3deb53a037a3ea51f06e5 +INFO:root:PassingDataObject: nmdc:c5683645d2c2c0900fc59dc406a21004 INFO:root:PassingDataObject: nmdc:3ad1053a463b0163818b29c38a1fe8dc -INFO:root:PassingDataObject: nmdc:84c782dde47abb3439620dc6d30123bc +INFO:root:PassingDataObject: nmdc:b942296473b3deb53a037a3ea51f06e5 +INFO:root:PassingDataObject: nmdc:5ef469c34b57a0b9efe02cb63ab1ac21 INFO:root:PassingDataObject: nmdc:50d454c121ec986ee0906cce1d622314 -INFO:root:PassingDataObject: nmdc:f4c795f1960578ffa07b63fc2ee36806 -INFO:root:PassingDataObject: nmdc:8b58658002b9cafb55072a41ce287b85 -INFO:root:PassingDataObject: nmdc:c5683645d2c2c0900fc59dc406a21004 -INFO:root:PassingDataObject: nmdc:c4c1939ccba1a9c2a52c7af3885a29b7 +INFO:root:PassingDataObject: nmdc:f4fc64b42556420aeec04971f0d49f53 +INFO:root:PassingDataObject: nmdc:64651f29480fe6bc89ea3bdddff65e81 INFO:root:PassingDataObject: nmdc:5028b46d04015d1f0e79a2210c43320b +INFO:root:PassingDataObject: nmdc:84c782dde47abb3439620dc6d30123bc INFO:root:PassingDataObject: nmdc:0076cabb745e8abe287c59a0d0297ad9 -INFO:root:PassingDataObject: nmdc:f4fc64b42556420aeec04971f0d49f53 -INFO:root:PassingDataObject: nmdc:0b4f4b73f72c7188ac7cffb10a799e69 -INFO:root:PassingDataObject: nmdc:5627da70e8bf135adbcab46e6330d2c4 -INFO:root:PassingDataObject: nmdc:5ef469c34b57a0b9efe02cb63ab1ac21 -INFO:root:PassingDataObject: nmdc:8d4c35cb6cb4b755ff8b96a84e333bd8 +INFO:root:PassingDataObject: nmdc:8b58658002b9cafb55072a41ce287b85 +INFO:root:PassingDataObject: nmdc:e21c5b3530e31e9ef4fc00990fef895a +INFO:root:PassingDataObject: nmdc:f4c795f1960578ffa07b63fc2ee36806 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138748 INFO:root:found 1 records INFO:root:record: nmdc:4cbc930855e87f6cc3f2255b875ccade, MAGs Analysis Activity for nmdc:mga00098 -INFO:root:PassingDataObject: nmdc:791a06272ee83c25c64d1b1d6618a455 INFO:root:PassingDataObject: nmdc:a1916d4a9b76a52e71832531c9127b48 +INFO:root:PassingDataObject: nmdc:791a06272ee83c25c64d1b1d6618a455 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138748 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-a0bq3b03 INFO:root:legacy_id: gold:Gp0138745 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-a0bq3b03 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:300109666a890c83f10c431a6245561a INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, Read QC Activity for nmdc:mga0f598 -INFO:root:PassingDataObject: nmdc:8b8ac90292b803e8882c8aa601233c1e INFO:root:PassingDataObject: nmdc:26469cdd3afb5ae9a6547fc32bf3d66b +INFO:root:PassingDataObject: nmdc:8b8ac90292b803e8882c8aa601233c1e INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, ReadBased Analysis Activity for nmdc:mga0f598 +INFO:root:PassingDataObject: nmdc:a9addb084ba81228780189c80a5e476b +INFO:root:PassingDataObject: nmdc:d09c43bc278b970afcd99c5b3ffbcc6e +INFO:root:PassingDataObject: nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 +INFO:root:PassingDataObject: nmdc:884c00067757f3648d92db9366340b0d +INFO:root:PassingDataObject: nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 INFO:root:PassingDataObject: nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 INFO:root:PassingDataObject: nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 -INFO:root:PassingDataObject: nmdc:d09c43bc278b970afcd99c5b3ffbcc6e -INFO:root:PassingDataObject: nmdc:a9addb084ba81228780189c80a5e476b INFO:root:PassingDataObject: nmdc:5687b844cbf0af67dec593bde42fc7d4 -INFO:root:PassingDataObject: nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 INFO:root:PassingDataObject: nmdc:91ec7367b50f6379ec85b460dc5a1f68 -INFO:root:PassingDataObject: nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 -INFO:root:PassingDataObject: nmdc:884c00067757f3648d92db9366340b0d INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, Assembly Activity for nmdc:mga0f598 INFO:root:PassingDataObject: nmdc:c3596a536ff27f6cd79edb26c6f99ab7 +INFO:root:PassingDataObject: nmdc:fff62accdf55c847cfb8652e7e07662f +INFO:root:PassingDataObject: nmdc:65c2509060ad834fdd85acb62acf817c INFO:root:PassingDataObject: nmdc:9c2e16d42788048d6cfea18e7c102f84 INFO:root:PassingDataObject: nmdc:818c1714f9de070016d6ddda3ecf5ea8 -INFO:root:PassingDataObject: nmdc:65c2509060ad834fdd85acb62acf817c -INFO:root:PassingDataObject: nmdc:fff62accdf55c847cfb8652e7e07662f INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, Annotation Activity for nmdc:mga0f598 +INFO:root:PassingDataObject: nmdc:9c86e518f743beec6bad862a7468d4af +INFO:root:PassingDataObject: nmdc:12cce38fcaf3b9192f6c8ef3f36126cf +INFO:root:PassingDataObject: nmdc:b806aeb54908d04ac692ac3860e99bcf INFO:root:PassingDataObject: nmdc:26c4d22a143a79908af85078d25aab33 -INFO:root:PassingDataObject: nmdc:e34b16ccdb4393a678ce38c0a118d9fd -INFO:root:PassingDataObject: nmdc:41e7b848cc5f7bdb966cf9f027d0f60c +INFO:root:PassingDataObject: nmdc:b0c550c0b1dca0eeb76e1b34be7890a0 INFO:root:PassingDataObject: nmdc:d7300a76d08faa027838ec7cd732a674 +INFO:root:PassingDataObject: nmdc:41e7b848cc5f7bdb966cf9f027d0f60c +INFO:root:PassingDataObject: nmdc:97dfb7e270316186379590598933ad70 +INFO:root:PassingDataObject: nmdc:8c51163630e1a74a8da571eba470183a INFO:root:PassingDataObject: nmdc:682a0797991b19555085e493306ffc1e INFO:root:PassingDataObject: nmdc:5a69b09507a8920352797aa74a0be03d -INFO:root:PassingDataObject: nmdc:e60ca6c4b7261dfbd21b9ee8bf751b7b INFO:root:PassingDataObject: nmdc:6938d50145775a70b4758c3000be6042 -INFO:root:PassingDataObject: nmdc:ea741c3127fcc9900e2a7f255b8b8580 -INFO:root:PassingDataObject: nmdc:97dfb7e270316186379590598933ad70 +INFO:root:PassingDataObject: nmdc:59ac6e19f2d4d21c0da75b23ca9c4bbe INFO:root:PassingDataObject: nmdc:bbdf0c76d7e7ab1a3c2b3e3e1720fdc1 -INFO:root:PassingDataObject: nmdc:9c86e518f743beec6bad862a7468d4af -INFO:root:PassingDataObject: nmdc:12cce38fcaf3b9192f6c8ef3f36126cf -INFO:root:PassingDataObject: nmdc:b806aeb54908d04ac692ac3860e99bcf -INFO:root:PassingDataObject: nmdc:b0c550c0b1dca0eeb76e1b34be7890a0 -INFO:root:PassingDataObject: nmdc:8c51163630e1a74a8da571eba470183a INFO:root:PassingDataObject: nmdc:db69bb5f46800d8e4c6d332682c2ed13 -INFO:root:PassingDataObject: nmdc:59ac6e19f2d4d21c0da75b23ca9c4bbe +INFO:root:PassingDataObject: nmdc:e34b16ccdb4393a678ce38c0a118d9fd INFO:root:PassingDataObject: nmdc:31f058161ee0620370b587f17970151f +INFO:root:PassingDataObject: nmdc:ea741c3127fcc9900e2a7f255b8b8580 +INFO:root:PassingDataObject: nmdc:e60ca6c4b7261dfbd21b9ee8bf751b7b INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138745 INFO:root:found 1 records INFO:root:record: nmdc:2b17bcec6a8b634fd2c0f39fa53af922, MAGs Analysis Activity for nmdc:mga0f598 -INFO:root:PassingDataObject: nmdc:4d86a276b3bff562f05e9b26b8828ce3 INFO:root:PassingDataObject: nmdc:e38231936c8bdbffeee6bb0ccc7196f7 +INFO:root:PassingDataObject: nmdc:4d86a276b3bff562f05e9b26b8828ce3 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138745 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-a7b00s66 INFO:root:legacy_id: gold:Gp0138739 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-a7b00s66 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:796233a318facd24d5c14f44f479dc43 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, Read QC Activity for nmdc:mga0mk61 -INFO:root:PassingDataObject: nmdc:ff3cd9483c04b1db219dead3372b780a INFO:root:PassingDataObject: nmdc:e52aa0da41e13df52179487aafc60ed4 +INFO:root:PassingDataObject: nmdc:ff3cd9483c04b1db219dead3372b780a INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, ReadBased Analysis Activity for nmdc:mga0mk61 INFO:root:PassingDataObject: nmdc:afe3dda5cc6792097f63a436e2786dc3 -INFO:root:PassingDataObject: nmdc:b1f3018fde1a7a7639dd85ee9642c1ea -INFO:root:PassingDataObject: nmdc:90994cf49b3e84e51d7b313fd6c031a0 INFO:root:PassingDataObject: nmdc:88e0926f84e091144f8df2c592b89e39 +INFO:root:PassingDataObject: nmdc:b1f3018fde1a7a7639dd85ee9642c1ea INFO:root:PassingDataObject: nmdc:e062b1c8dd01341c6619c148562623f6 +INFO:root:PassingDataObject: nmdc:90994cf49b3e84e51d7b313fd6c031a0 INFO:root:PassingDataObject: nmdc:d488dc15a9c0d8ce0b9edddc454b1476 INFO:root:PassingDataObject: nmdc:c612e3e540471677da18cd7091985ff6 -INFO:root:PassingDataObject: nmdc:8494637a042ecd6b5470702eb662893a INFO:root:PassingDataObject: nmdc:8b45157104eaa7e0662df1d80bbde27d +INFO:root:PassingDataObject: nmdc:8494637a042ecd6b5470702eb662893a INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, Assembly Activity for nmdc:mga0mk61 +INFO:root:PassingDataObject: nmdc:97d82d36c70bcfc40201e7a9f12a67a3 INFO:root:PassingDataObject: nmdc:5f028a927e1fb1b8f71f9f541581db53 INFO:root:PassingDataObject: nmdc:265810b4500a552b57966668fcc61562 -INFO:root:PassingDataObject: nmdc:431a14b1d40aea16ab1597bfc3203611 INFO:root:PassingDataObject: nmdc:4ecbb1a27c05366241dc5d12db878c37 -INFO:root:PassingDataObject: nmdc:97d82d36c70bcfc40201e7a9f12a67a3 +INFO:root:PassingDataObject: nmdc:431a14b1d40aea16ab1597bfc3203611 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, Annotation Activity for nmdc:mga0mk61 +INFO:root:PassingDataObject: nmdc:ea417fe53cd29b3dbdde8e6d21a6ea35 +INFO:root:PassingDataObject: nmdc:d5627a37546246f224594c313fd4d48d +INFO:root:PassingDataObject: nmdc:cfcf143c4729735752b2a88f79836d31 +INFO:root:PassingDataObject: nmdc:abf33cb2a82318d4c84cf00b91b32013 +INFO:root:PassingDataObject: nmdc:31f403691451249ff50a8fad9b494db7 +INFO:root:PassingDataObject: nmdc:ea544969b73a9c0bb91c6ab2b12228df +INFO:root:PassingDataObject: nmdc:317fef53c1628b43e6fcb2d1436158c0 INFO:root:PassingDataObject: nmdc:238f8816563ae93e2c8a3238ddb268ee INFO:root:PassingDataObject: nmdc:e1eb0872834f2b3c29a54a8891ccf55a -INFO:root:PassingDataObject: nmdc:ea544969b73a9c0bb91c6ab2b12228df INFO:root:PassingDataObject: nmdc:9806ad01a838fea57ff7c971e389a00b -INFO:root:PassingDataObject: nmdc:68a58c06cd2ee30723b7ba91f09a178c -INFO:root:PassingDataObject: nmdc:874865b0347965a58f3501fba575b34a -INFO:root:PassingDataObject: nmdc:689a9c6a9ad06fbc25e54d3b8f72a420 INFO:root:PassingDataObject: nmdc:032433aea6d94d2a3a7ae1501ec540fb -INFO:root:PassingDataObject: nmdc:317fef53c1628b43e6fcb2d1436158c0 -INFO:root:PassingDataObject: nmdc:abf33cb2a82318d4c84cf00b91b32013 -INFO:root:PassingDataObject: nmdc:cfcf143c4729735752b2a88f79836d31 -INFO:root:PassingDataObject: nmdc:31f403691451249ff50a8fad9b494db7 +INFO:root:PassingDataObject: nmdc:0640ce19cb38cd9ccebbb26b5c9f9182 INFO:root:PassingDataObject: nmdc:519d8b744ce5f71b34a9f70efa7baf3e -INFO:root:PassingDataObject: nmdc:ea417fe53cd29b3dbdde8e6d21a6ea35 -INFO:root:PassingDataObject: nmdc:d5627a37546246f224594c313fd4d48d +INFO:root:PassingDataObject: nmdc:68a58c06cd2ee30723b7ba91f09a178c +INFO:root:PassingDataObject: nmdc:689a9c6a9ad06fbc25e54d3b8f72a420 +INFO:root:PassingDataObject: nmdc:874865b0347965a58f3501fba575b34a +INFO:root:PassingDataObject: nmdc:f85bd744ec593a29fab2b8540ca6b6fe INFO:root:PassingDataObject: nmdc:d6192f5171ad9016bbd4cb0b697162d2 INFO:root:PassingDataObject: nmdc:f2c53af5ac0aaad79c2c950600043596 -INFO:root:PassingDataObject: nmdc:f85bd744ec593a29fab2b8540ca6b6fe -INFO:root:PassingDataObject: nmdc:0640ce19cb38cd9ccebbb26b5c9f9182 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138739 INFO:root:found 1 records INFO:root:record: nmdc:4884c130f82a686985297b1990c9f531, MAGs Analysis Activity for nmdc:mga0mk61 INFO:root:PassingDataObject: nmdc:37098dec0e310e3b2c16141537e9e10d INFO:root:PassingDataObject: nmdc:5d3eeb386fdaaf4226826fb45fcacd92 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138739 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-sqz66z61 INFO:root:legacy_id: gold:Gp0138743 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-sqz66z61 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f31a2a473fa6cc081ff6c136d79c454a INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, Read QC Activity for nmdc:mga05n40 -INFO:root:PassingDataObject: nmdc:6466fb06869fd45a23d98d3fbe6e476c INFO:root:PassingDataObject: nmdc:98833e75c0ec5a63b72fedf9cf7e02ee +INFO:root:PassingDataObject: nmdc:6466fb06869fd45a23d98d3fbe6e476c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, ReadBased Analysis Activity for nmdc:mga05n40 +INFO:root:PassingDataObject: nmdc:49112ae784f64075efdda656c18bd8ce +INFO:root:PassingDataObject: nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 INFO:root:PassingDataObject: nmdc:fb18ee2cb8a08864dfca05d07865cdc2 -INFO:root:PassingDataObject: nmdc:cadb9ca59af1220df291b1982786e205 -INFO:root:PassingDataObject: nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 +INFO:root:PassingDataObject: nmdc:38ccb457d30f57b11d2b94abb2b99179 +INFO:root:PassingDataObject: nmdc:856a6c981be6986702dc534a6e386667 INFO:root:PassingDataObject: nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 INFO:root:PassingDataObject: nmdc:b983789d4379b8ad7c2712f396e3a603 -INFO:root:PassingDataObject: nmdc:856a6c981be6986702dc534a6e386667 -INFO:root:PassingDataObject: nmdc:38ccb457d30f57b11d2b94abb2b99179 -INFO:root:PassingDataObject: nmdc:49112ae784f64075efdda656c18bd8ce -INFO:root:PassingDataObject: nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 +INFO:root:PassingDataObject: nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 +INFO:root:PassingDataObject: nmdc:cadb9ca59af1220df291b1982786e205 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, Assembly Activity for nmdc:mga05n40 INFO:root:PassingDataObject: nmdc:53c302c537e38b9c59a2ae62ea5f69a9 +INFO:root:PassingDataObject: nmdc:a065964a2e48b46a460abe4a05dd8049 INFO:root:PassingDataObject: nmdc:0e9ba8eb0aafe70178dd33185777e9f2 INFO:root:PassingDataObject: nmdc:c66cc438d8fc6f160328734db1b44e4d INFO:root:PassingDataObject: nmdc:75e4dbac293b74268199cf4dd725ad04 -INFO:root:PassingDataObject: nmdc:a065964a2e48b46a460abe4a05dd8049 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, Annotation Activity for nmdc:mga05n40 -INFO:root:PassingDataObject: nmdc:de16eb63f56515ad65a821d19e5b3fe0 -INFO:root:PassingDataObject: nmdc:6feaea765378b6bcb5277b535817e87f -INFO:root:PassingDataObject: nmdc:2a064367e46775a79912a770d1c2fd1c -INFO:root:PassingDataObject: nmdc:9805b6f9e07499370876a4645fcd3200 -INFO:root:PassingDataObject: nmdc:671b2b38738ec621c4334c2fb54c1a26 +INFO:root:PassingDataObject: nmdc:60b91616c70568f1fd7f869cc63c790b INFO:root:PassingDataObject: nmdc:db27d5b7911095f943c63d8715c6d521 -INFO:root:PassingDataObject: nmdc:5db8dd0e7e060fe38c0e48ff14ea4863 -INFO:root:PassingDataObject: nmdc:e20dc235311070f80d0958065b0f28a7 -INFO:root:PassingDataObject: nmdc:f50d831c496aab8a06784bfcf872bc80 -INFO:root:PassingDataObject: nmdc:3578b482c0c463605390c5c7a003b3d9 INFO:root:PassingDataObject: nmdc:c08251d1ea790d05424b0d90ec4ddd15 -INFO:root:PassingDataObject: nmdc:45f92c820c75efef1a94ff430582d644 -INFO:root:PassingDataObject: nmdc:60b91616c70568f1fd7f869cc63c790b +INFO:root:PassingDataObject: nmdc:2a064367e46775a79912a770d1c2fd1c +INFO:root:PassingDataObject: nmdc:4419ee2d260c89b513c13fbf41c4b765 +INFO:root:PassingDataObject: nmdc:08daff6f10c3bf8efa8daa278c973b87 INFO:root:PassingDataObject: nmdc:b245597fc59297fb68ef0a4cf4eec79e INFO:root:PassingDataObject: nmdc:8d1fc61e2683d831875d54652e24a639 -INFO:root:PassingDataObject: nmdc:08daff6f10c3bf8efa8daa278c973b87 +INFO:root:PassingDataObject: nmdc:6feaea765378b6bcb5277b535817e87f +INFO:root:PassingDataObject: nmdc:9805b6f9e07499370876a4645fcd3200 INFO:root:PassingDataObject: nmdc:866778e4ce54983385f258ee79585bcb -INFO:root:PassingDataObject: nmdc:4419ee2d260c89b513c13fbf41c4b765 +INFO:root:PassingDataObject: nmdc:de16eb63f56515ad65a821d19e5b3fe0 +INFO:root:PassingDataObject: nmdc:f50d831c496aab8a06784bfcf872bc80 INFO:root:PassingDataObject: nmdc:60dcf3ef844f42fd20b4095943b03688 +INFO:root:PassingDataObject: nmdc:5db8dd0e7e060fe38c0e48ff14ea4863 +INFO:root:PassingDataObject: nmdc:671b2b38738ec621c4334c2fb54c1a26 +INFO:root:PassingDataObject: nmdc:3578b482c0c463605390c5c7a003b3d9 +INFO:root:PassingDataObject: nmdc:45f92c820c75efef1a94ff430582d644 +INFO:root:PassingDataObject: nmdc:e20dc235311070f80d0958065b0f28a7 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138743 INFO:root:found 1 records INFO:root:record: nmdc:b15cfb0ec538574529b41dbb7b825976, MAGs Analysis Activity for nmdc:mga05n40 -INFO:root:PassingDataObject: nmdc:29cab2e416f638774360053aeef09208 INFO:root:PassingDataObject: nmdc:922085dd2fa7f49277830006c131e3de +INFO:root:PassingDataObject: nmdc:29cab2e416f638774360053aeef09208 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138743 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-prjs5x33 INFO:root:legacy_id: gold:Gp0138754 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-prjs5x33 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:86cb807a667b81fabb252a75eb79022c INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, Read QC Activity for nmdc:mga0k893 INFO:root:PassingDataObject: nmdc:265f2da99dea8d10bf78c9c840b101c5 INFO:root:PassingDataObject: nmdc:64f78bbabad2f9d5ba81ba08d72548d4 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, ReadBased Analysis Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:1b5b740ccf227209b54a7ceb6c860cfb -INFO:root:PassingDataObject: nmdc:6dde7b5c1e2cb869a10cb03312110709 INFO:root:PassingDataObject: nmdc:cb644ed38eaf40f3d421cf555968f623 +INFO:root:PassingDataObject: nmdc:7e5b88644c0e4b1953eae268202823e6 +INFO:root:PassingDataObject: nmdc:1b5b740ccf227209b54a7ceb6c860cfb INFO:root:PassingDataObject: nmdc:8296f03d176afd095c8fa98f4c2f9662 INFO:root:PassingDataObject: nmdc:658d593dbf5f8104188df08dc35153d1 INFO:root:PassingDataObject: nmdc:8492f8378ebb1740e86c75d0612d6e2c +INFO:root:PassingDataObject: nmdc:6dde7b5c1e2cb869a10cb03312110709 INFO:root:PassingDataObject: nmdc:e94829532f3107d64349e53f82828a89 -INFO:root:PassingDataObject: nmdc:7e5b88644c0e4b1953eae268202823e6 INFO:root:PassingDataObject: nmdc:8f614cde2154a1906f1ff5059c69b8f2 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, Assembly Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:a23021719050b58ba81e789c30b9c5c2 INFO:root:PassingDataObject: nmdc:37c66cf049a5cee03b98856ab11236c1 -INFO:root:PassingDataObject: nmdc:54289b50c6b631a097a827578534adf3 INFO:root:PassingDataObject: nmdc:df3d11a581736d44c9e90d559c9379d9 INFO:root:PassingDataObject: nmdc:b5d55d570572552f4d613813073ede4c +INFO:root:PassingDataObject: nmdc:a23021719050b58ba81e789c30b9c5c2 +INFO:root:PassingDataObject: nmdc:54289b50c6b631a097a827578534adf3 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, Annotation Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:3a4c2ccbb2f68aa97c3dc11cb686d494 +INFO:root:PassingDataObject: nmdc:2a7013736753878dd0b77c3783a136c0 +INFO:root:PassingDataObject: nmdc:80a35ac9c027b46a71cb82947110a10e +INFO:root:PassingDataObject: nmdc:53553365147ff38127d230a01f3ad5e0 INFO:root:PassingDataObject: nmdc:0595d78754c142ee582c2e4cd1d99977 -INFO:root:PassingDataObject: nmdc:ebb8dbd62d1caaa34e55165c4f21b8cd -INFO:root:PassingDataObject: nmdc:0a2da73a6fa64ea5233d74a4171a3794 -INFO:root:PassingDataObject: nmdc:e5d9052d26d099ee35089a987b2e4eba +INFO:root:PassingDataObject: nmdc:8a8f6671b5b6450e7fc716cf9b56b285 +INFO:root:PassingDataObject: nmdc:b4cb834d2bf279fe5b1508a18056bcdc +INFO:root:PassingDataObject: nmdc:bf246f264c5ae1ef44cca1bf5c7f6294 +INFO:root:PassingDataObject: nmdc:f97f27b7c86612f4cbd052acd262ee99 INFO:root:PassingDataObject: nmdc:110c8b05fc32cb5294a35afb7b475908 INFO:root:PassingDataObject: nmdc:df59792bcb2335c1f31af8bf144d701f -INFO:root:PassingDataObject: nmdc:2a7013736753878dd0b77c3783a136c0 -INFO:root:PassingDataObject: nmdc:1756e669881651a558e2ae11d32e2a87 -INFO:root:PassingDataObject: nmdc:80a35ac9c027b46a71cb82947110a10e +INFO:root:PassingDataObject: nmdc:0a2da73a6fa64ea5233d74a4171a3794 +INFO:root:PassingDataObject: nmdc:2817cd142c612297af194a0b3d4021e8 INFO:root:PassingDataObject: nmdc:e0a94da3eef859f44533c4ed507859d0 -INFO:root:PassingDataObject: nmdc:f97f27b7c86612f4cbd052acd262ee99 -INFO:root:PassingDataObject: nmdc:bf246f264c5ae1ef44cca1bf5c7f6294 +INFO:root:PassingDataObject: nmdc:1756e669881651a558e2ae11d32e2a87 INFO:root:PassingDataObject: nmdc:4abc269a7b823bdb1876611b1a40e1f2 -INFO:root:PassingDataObject: nmdc:8a8f6671b5b6450e7fc716cf9b56b285 -INFO:root:PassingDataObject: nmdc:2817cd142c612297af194a0b3d4021e8 -INFO:root:PassingDataObject: nmdc:b4cb834d2bf279fe5b1508a18056bcdc -INFO:root:PassingDataObject: nmdc:53553365147ff38127d230a01f3ad5e0 +INFO:root:PassingDataObject: nmdc:e5d9052d26d099ee35089a987b2e4eba +INFO:root:PassingDataObject: nmdc:ebb8dbd62d1caaa34e55165c4f21b8cd INFO:root:PassingDataObject: nmdc:2e46315394e8e818dd954817922f8061 +INFO:root:PassingDataObject: nmdc:3a4c2ccbb2f68aa97c3dc11cb686d494 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138754 INFO:root:found 1 records INFO:root:record: nmdc:a38b8d297a30b95d74235694302a7853, MAGs Analysis Activity for nmdc:mga0k893 -INFO:root:PassingDataObject: nmdc:f215c49352dd0d60aa455a0f958ed0de INFO:root:PassingDataObject: nmdc:4fcdabda32a39777cc3f70cfe75b7348 +INFO:root:PassingDataObject: nmdc:f215c49352dd0d60aa455a0f958ed0de INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138754 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-y08fp921 INFO:root:legacy_id: gold:Gp0138751 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-y08fp921 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:20f714c290eeba8f76fe33ea21bf2291 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, Read QC Activity for nmdc:mga06977 -INFO:root:PassingDataObject: nmdc:74b88ee74fbbbe184664ce624dee82e7 INFO:root:PassingDataObject: nmdc:f8ceed0240176014970c77f79f236ea3 +INFO:root:PassingDataObject: nmdc:74b88ee74fbbbe184664ce624dee82e7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, ReadBased Analysis Activity for nmdc:mga06977 -INFO:root:PassingDataObject: nmdc:04d59bf20f0ff4407ad1165408e38c7e -INFO:root:PassingDataObject: nmdc:fe403d58f13800b56e638d59ba96bf1b -INFO:root:PassingDataObject: nmdc:7e589a42f0014167292de74fb1f58ce8 -INFO:root:PassingDataObject: nmdc:5f29a30f9357988e214b88cd10a52701 INFO:root:PassingDataObject: nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 INFO:root:PassingDataObject: nmdc:2862a776261adad85107834fd8758312 +INFO:root:PassingDataObject: nmdc:fe403d58f13800b56e638d59ba96bf1b +INFO:root:PassingDataObject: nmdc:04d59bf20f0ff4407ad1165408e38c7e +INFO:root:PassingDataObject: nmdc:5f29a30f9357988e214b88cd10a52701 INFO:root:PassingDataObject: nmdc:faded304d5420687e5031b4fe13a41ba +INFO:root:PassingDataObject: nmdc:7e589a42f0014167292de74fb1f58ce8 INFO:root:PassingDataObject: nmdc:551120d522b4a7a27545e1ff1236eb1e INFO:root:PassingDataObject: nmdc:4ffbd2cae06ea7b62b2d529960325ba9 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, Assembly Activity for nmdc:mga06977 +INFO:root:PassingDataObject: nmdc:aa905d7c7838b5e43e15940dc5db2100 INFO:root:PassingDataObject: nmdc:4c8eb256434693a67f66d81eb6fb926e -INFO:root:PassingDataObject: nmdc:e049958d5490dbe3228712803d73095a INFO:root:PassingDataObject: nmdc:088807ac3d09db863fbf4d936fadad06 -INFO:root:PassingDataObject: nmdc:aa905d7c7838b5e43e15940dc5db2100 +INFO:root:PassingDataObject: nmdc:e049958d5490dbe3228712803d73095a INFO:root:PassingDataObject: nmdc:12d98e676b4d3155b2feec02a2cf8821 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, Annotation Activity for nmdc:mga06977 +INFO:root:PassingDataObject: nmdc:7ee4de1f9fa45d28623b188d8af52e4a +INFO:root:PassingDataObject: nmdc:27a1a985cc21f516dd046c418bef8e36 +INFO:root:PassingDataObject: nmdc:7e94bc9a5abd5df7c1cbd6ac38cb71a5 INFO:root:PassingDataObject: nmdc:1485d7a9b5b69926e94eb9840c32742a -INFO:root:PassingDataObject: nmdc:40ebc7eabd507a85761f572322257ca3 +INFO:root:PassingDataObject: nmdc:178387e291f8aa8b8261954249cc2c5c +INFO:root:PassingDataObject: nmdc:c34954d148301e96d50c8673123e1434 +INFO:root:PassingDataObject: nmdc:46999030f74e5a13940cf7f18b02c30b INFO:root:PassingDataObject: nmdc:9d4c9528e66589da0bf975205ea98619 -INFO:root:PassingDataObject: nmdc:91836723fc0e82eb38cf099e38c6f550 +INFO:root:PassingDataObject: nmdc:80443b91cab91b8b0cd9a88fb31b42cb +INFO:root:PassingDataObject: nmdc:5293be4fa012594eb4820e97f0ee9390 INFO:root:PassingDataObject: nmdc:1af282ef52c20652a1aa07cc518f98a0 -INFO:root:PassingDataObject: nmdc:7e94bc9a5abd5df7c1cbd6ac38cb71a5 -INFO:root:PassingDataObject: nmdc:27a1a985cc21f516dd046c418bef8e36 INFO:root:PassingDataObject: nmdc:17f890eaf7c3d7f00d1fa713a67f5219 -INFO:root:PassingDataObject: nmdc:80443b91cab91b8b0cd9a88fb31b42cb -INFO:root:PassingDataObject: nmdc:ebe8f682d6270e2703c1c6fff9f0df52 -INFO:root:PassingDataObject: nmdc:178387e291f8aa8b8261954249cc2c5c +INFO:root:PassingDataObject: nmdc:91836723fc0e82eb38cf099e38c6f550 INFO:root:PassingDataObject: nmdc:e64eb9e9a94dfe2cc0aa4cf6379fa3a9 -INFO:root:PassingDataObject: nmdc:07274896045768dd45eb0e69130aed4c -INFO:root:PassingDataObject: nmdc:c34954d148301e96d50c8673123e1434 +INFO:root:PassingDataObject: nmdc:ebe8f682d6270e2703c1c6fff9f0df52 INFO:root:PassingDataObject: nmdc:f2b3569c45d3720610ecf1283f677b5f -INFO:root:PassingDataObject: nmdc:7ee4de1f9fa45d28623b188d8af52e4a +INFO:root:PassingDataObject: nmdc:40ebc7eabd507a85761f572322257ca3 INFO:root:PassingDataObject: nmdc:10bcd84ac3ce3ea0a8ea4c8d8fd88b03 -INFO:root:PassingDataObject: nmdc:5293be4fa012594eb4820e97f0ee9390 -INFO:root:PassingDataObject: nmdc:46999030f74e5a13940cf7f18b02c30b +INFO:root:PassingDataObject: nmdc:07274896045768dd45eb0e69130aed4c INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138751 INFO:root:found 1 records INFO:root:record: nmdc:152a13c8451e2bab601eae39f1bb0233, MAGs Analysis Activity for nmdc:mga06977 -INFO:root:PassingDataObject: nmdc:bdf263d619919dcdfc431289cdf34243 INFO:root:PassingDataObject: nmdc:25b0dbb78054bebb62594e5b6b24fa6d +INFO:root:PassingDataObject: nmdc:bdf263d619919dcdfc431289cdf34243 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138751 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-ysp4vq35 INFO:root:legacy_id: gold:Gp0138749 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-ysp4vq35 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b6d907e2b41d013afcb2b6aa81c1be87 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, Read QC Activity for nmdc:mga0ks42 INFO:root:PassingDataObject: nmdc:2b275b2fb125c7fc8d77bba7698f2311 INFO:root:PassingDataObject: nmdc:3b9b7f56b823fac39c7f82cc0355ec0c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, ReadBased Analysis Activity for nmdc:mga0ks42 +INFO:root:PassingDataObject: nmdc:756e0ac2425eda82f589d56a14e67c34 INFO:root:PassingDataObject: nmdc:f46be59cb522b317b9bf738237940f0b -INFO:root:PassingDataObject: nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 INFO:root:PassingDataObject: nmdc:98228a7d2cc38ae730f6442175da7fbc INFO:root:PassingDataObject: nmdc:e2cab8bac20d35efc96806221abbf69d +INFO:root:PassingDataObject: nmdc:a3c7e366671c3d922125c2b82dde5f9b INFO:root:PassingDataObject: nmdc:f1e7e173ce2a3730d05788c36ecc2350 -INFO:root:PassingDataObject: nmdc:6b333856a7fa9bddb2e5b743bd8127c8 INFO:root:PassingDataObject: nmdc:7f2baf22b5f33bfda016c580f279bcb9 -INFO:root:PassingDataObject: nmdc:a3c7e366671c3d922125c2b82dde5f9b -INFO:root:PassingDataObject: nmdc:756e0ac2425eda82f589d56a14e67c34 +INFO:root:PassingDataObject: nmdc:6b333856a7fa9bddb2e5b743bd8127c8 +INFO:root:PassingDataObject: nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, Assembly Activity for nmdc:mga0ks42 -INFO:root:PassingDataObject: nmdc:097282771962a8077194e4bd2e0e0f3b INFO:root:PassingDataObject: nmdc:bdbaf92a5028414ae5e6dac2fb3314a8 -INFO:root:PassingDataObject: nmdc:f8aea25dcd7f29578c046109b9725092 +INFO:root:PassingDataObject: nmdc:097282771962a8077194e4bd2e0e0f3b INFO:root:PassingDataObject: nmdc:9f05dd0954ff8fbee6eb09b1aa794355 +INFO:root:PassingDataObject: nmdc:f8aea25dcd7f29578c046109b9725092 INFO:root:PassingDataObject: nmdc:fbba44c97ee3c4de49c91d8609db8a51 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, Annotation Activity for nmdc:mga0ks42 -INFO:root:PassingDataObject: nmdc:33d668128184e205fded7b34d008f9b8 -INFO:root:PassingDataObject: nmdc:58001acdbec4f269d83bcd14e5df4ede -INFO:root:PassingDataObject: nmdc:2981798f653fafeae687e1e84f4efbbc INFO:root:PassingDataObject: nmdc:c1b6a51c6904fc93d2990f7cd8b9cecb -INFO:root:PassingDataObject: nmdc:056cb597c0b60df73546a518275ec9e5 -INFO:root:PassingDataObject: nmdc:a5d17a6e4e268d3486295a4b975dafe5 +INFO:root:PassingDataObject: nmdc:c42cf292fe57137fb4791be81c193e4d +INFO:root:PassingDataObject: nmdc:08b73086e8e649e41bae2e540095bdd5 INFO:root:PassingDataObject: nmdc:2f53c7c9ec66b5c74256011808b6dcbf +INFO:root:PassingDataObject: nmdc:7627712b3624cc629b57e8add4b43f13 +INFO:root:PassingDataObject: nmdc:1d0aa540d59db67586b2c4ad2321e552 +INFO:root:PassingDataObject: nmdc:166262f75557e6ddbbcaeabc6241951f INFO:root:PassingDataObject: nmdc:ced5c9b479c23b9343c5415ba8b81e76 -INFO:root:PassingDataObject: nmdc:08b73086e8e649e41bae2e540095bdd5 +INFO:root:PassingDataObject: nmdc:056cb597c0b60df73546a518275ec9e5 INFO:root:PassingDataObject: nmdc:c62e921a15ab74a79c4d1f7dac258cc5 -INFO:root:PassingDataObject: nmdc:3f1856a22acdbcb3546b6e1ea8db1eb2 +INFO:root:PassingDataObject: nmdc:58001acdbec4f269d83bcd14e5df4ede +INFO:root:PassingDataObject: nmdc:9a79193ed416667e32cfc273d13fb700 INFO:root:PassingDataObject: nmdc:de12252612de497390e8b049780c43f0 INFO:root:PassingDataObject: nmdc:d12184b115e3467ff1e71d86dbd4af79 -INFO:root:PassingDataObject: nmdc:1d0aa540d59db67586b2c4ad2321e552 +INFO:root:PassingDataObject: nmdc:2981798f653fafeae687e1e84f4efbbc +INFO:root:PassingDataObject: nmdc:3f1856a22acdbcb3546b6e1ea8db1eb2 +INFO:root:PassingDataObject: nmdc:33d668128184e205fded7b34d008f9b8 +INFO:root:PassingDataObject: nmdc:a5d17a6e4e268d3486295a4b975dafe5 INFO:root:PassingDataObject: nmdc:5a365aa8b77327cb82bfc37267b8b431 -INFO:root:PassingDataObject: nmdc:9a79193ed416667e32cfc273d13fb700 -INFO:root:PassingDataObject: nmdc:c42cf292fe57137fb4791be81c193e4d -INFO:root:PassingDataObject: nmdc:166262f75557e6ddbbcaeabc6241951f -INFO:root:PassingDataObject: nmdc:7627712b3624cc629b57e8add4b43f13 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138749 INFO:root:found 1 records INFO:root:record: nmdc:a357ab1b78b8cb80f9152a72635e5945, MAGs Analysis Activity for nmdc:mga0ks42 -INFO:root:PassingDataObject: nmdc:92ad1228b2803d14f20bf0fc63d0dbff INFO:root:PassingDataObject: nmdc:35338bd919685c5988648a7594ef135b +INFO:root:PassingDataObject: nmdc:92ad1228b2803d14f20bf0fc63d0dbff INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138749 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-rxv6kd89 INFO:root:legacy_id: gold:Gp0138753 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-rxv6kd89 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c52cdaa42622674591c66ceeb0c33758 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138753 INFO:root:found 1 records INFO:root:record: nmdc:1cecb298d4e3892d33e60d5d3d71b029, Read QC Activity for nmdc:mga0ak51 INFO:root:PassingDataObject: nmdc:6bb6387d05cfca32b35d82c709278cf1 INFO:root:PassingDataObject: nmdc:e93348ff891c69dff4a3775c0e22fa4d INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138753 INFO:root:found 1 records INFO:root:record: nmdc:1cecb298d4e3892d33e60d5d3d71b029, ReadBased Analysis Activity for nmdc:mga0ak51 -INFO:root:PassingDataObject: nmdc:66940e094d2be736538bf752d6e626c4 -INFO:root:PassingDataObject: nmdc:7dd0500dee529770c19006368cdbf843 -INFO:root:PassingDataObject: nmdc:a867326eda4ad18701c2c2326295cc75 -INFO:root:PassingDataObject: nmdc:ff7c0af07a528819c97a37da0336d16f INFO:root:PassingDataObject: nmdc:a10aad2d2f352298c72610a1556783ce -INFO:root:PassingDataObject: nmdc:44ae37842fd4075371a1503fd2540e5a INFO:root:PassingDataObject: nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 +INFO:root:PassingDataObject: nmdc:44ae37842fd4075371a1503fd2540e5a +INFO:root:PassingDataObject: nmdc:66940e094d2be736538bf752d6e626c4 INFO:root:PassingDataObject: nmdc:079810154a4bc3cf9081189e81143815 +INFO:root:PassingDataObject: nmdc:ff7c0af07a528819c97a37da0336d16f +INFO:root:PassingDataObject: nmdc:7dd0500dee529770c19006368cdbf843 INFO:root:PassingDataObject: nmdc:7efb1644b8ac67406ac2bb3c9206518c +INFO:root:PassingDataObject: nmdc:a867326eda4ad18701c2c2326295cc75 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138753 INFO:root:found 1 records INFO:root:record: nmdc:1cecb298d4e3892d33e60d5d3d71b029, Assembly Activity for nmdc:mga0ak51 +INFO:root:PassingDataObject: nmdc:90fe74a9b0acce7f2a60bcaad8181b37 INFO:root:PassingDataObject: nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 +INFO:root:PassingDataObject: nmdc:66485d8a5a362830e8c6de5e82b6da28 INFO:root:PassingDataObject: nmdc:4768cfee3cc465d50b6df29f0996ca96 INFO:root:PassingDataObject: nmdc:0a519bd52b6c04196e219cea28b9828d -INFO:root:PassingDataObject: nmdc:66485d8a5a362830e8c6de5e82b6da28 -INFO:root:PassingDataObject: nmdc:90fe74a9b0acce7f2a60bcaad8181b37 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138753 INFO:root:found 1 records INFO:root:record: nmdc:1cecb298d4e3892d33e60d5d3d71b029, Annotation Activity for nmdc:mga0ak51 -INFO:root:PassingDataObject: nmdc:10098fac4a0c5d6f661a2d70b0731286 -INFO:root:PassingDataObject: nmdc:b8bf2491d5451d0ad9a3c8a7f065ab52 +INFO:root:PassingDataObject: nmdc:192fc2bd159f593be05abd29eecdca1f +INFO:root:PassingDataObject: nmdc:c392740111c5ce6381b942b06361a4e4 INFO:root:PassingDataObject: nmdc:51108534afb268072772ba932b196b90 -INFO:root:PassingDataObject: nmdc:def660bd57d564f6aff37aa281d228ff -INFO:root:PassingDataObject: nmdc:cbe6baff1917ba0f15f19d66c8157c48 +INFO:root:PassingDataObject: nmdc:d0b876ac6eff6c16afe8efebfbb274bf INFO:root:PassingDataObject: nmdc:fb5944515ca540342851fc7af375c5c6 -INFO:root:PassingDataObject: nmdc:a16adbdcd904b83aac1578729343588e -INFO:root:PassingDataObject: nmdc:198a4d3e7e06b0aef929b6f279eef846 -INFO:root:PassingDataObject: nmdc:192fc2bd159f593be05abd29eecdca1f +INFO:root:PassingDataObject: nmdc:cbe6baff1917ba0f15f19d66c8157c48 INFO:root:PassingDataObject: nmdc:22bad3ec45f1240b0a92ba2c659b999d INFO:root:PassingDataObject: nmdc:6cff3a6be704f71fa72e2acb107aa1e0 -INFO:root:PassingDataObject: nmdc:d0b876ac6eff6c16afe8efebfbb274bf INFO:root:PassingDataObject: nmdc:186016b2439acee419343e917c5e8422 +INFO:root:PassingDataObject: nmdc:198a4d3e7e06b0aef929b6f279eef846 INFO:root:PassingDataObject: nmdc:a56a0a09ec0c46c83788f18c3ffb1774 -INFO:root:PassingDataObject: nmdc:c392740111c5ce6381b942b06361a4e4 -INFO:root:PassingDataObject: nmdc:5bfec9c3145df50dc000fb952b7b8e6a INFO:root:PassingDataObject: nmdc:fb21e36727cc2db290334b8e89b9b3fc INFO:root:PassingDataObject: nmdc:ea4a2a09b0d87afc8bf30eee52f940a5 +INFO:root:PassingDataObject: nmdc:def660bd57d564f6aff37aa281d228ff +INFO:root:PassingDataObject: nmdc:b8bf2491d5451d0ad9a3c8a7f065ab52 INFO:root:PassingDataObject: nmdc:2694ba8ef0d05fe61953504290130b61 +INFO:root:PassingDataObject: nmdc:10098fac4a0c5d6f661a2d70b0731286 +INFO:root:PassingDataObject: nmdc:a16adbdcd904b83aac1578729343588e +INFO:root:PassingDataObject: nmdc:5bfec9c3145df50dc000fb952b7b8e6a INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138753 INFO:root:found 1 records INFO:root:record: nmdc:1cecb298d4e3892d33e60d5d3d71b029, MAGs Analysis Activity for nmdc:mga0ak51 -INFO:root:PassingDataObject: nmdc:49604dc914700cf4ccbb9412f0dd2075 INFO:root:PassingDataObject: nmdc:7b1f5389bcf876c8ececfceb7ef66306 +INFO:root:PassingDataObject: nmdc:49604dc914700cf4ccbb9412f0dd2075 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138753 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-0jzfnf61 INFO:root:legacy_id: gold:Gp0138747 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-0jzfnf61 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6f503435c01cf49ed7805ce4c2d26d46 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, Read QC Activity for nmdc:mga0ax21 INFO:root:PassingDataObject: nmdc:6fe56b7ad72e0db84e769adf573936c9 INFO:root:PassingDataObject: nmdc:0e79327783fe58785d9a0238c3ab7165 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, ReadBased Analysis Activity for nmdc:mga0ax21 INFO:root:PassingDataObject: nmdc:e06ae82ad46cf9579742536eb879c819 -INFO:root:PassingDataObject: nmdc:8dfe0251b7531da70cde8e5a0d44686a +INFO:root:PassingDataObject: nmdc:694174082a13290f789b435fea8bc451 INFO:root:PassingDataObject: nmdc:f270aa128dd2057f3ef8ad0759e240ce -INFO:root:PassingDataObject: nmdc:ed6b118f66f2ade75aaca5e27b73304a -INFO:root:PassingDataObject: nmdc:8a62d3890a2dd25117f0a07c418adf8b -INFO:root:PassingDataObject: nmdc:638a10778451ae6f17dcea786424731d INFO:root:PassingDataObject: nmdc:5c282197ecceebb84a7f931fc2389f59 +INFO:root:PassingDataObject: nmdc:8dfe0251b7531da70cde8e5a0d44686a +INFO:root:PassingDataObject: nmdc:8a62d3890a2dd25117f0a07c418adf8b INFO:root:PassingDataObject: nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 -INFO:root:PassingDataObject: nmdc:694174082a13290f789b435fea8bc451 +INFO:root:PassingDataObject: nmdc:ed6b118f66f2ade75aaca5e27b73304a +INFO:root:PassingDataObject: nmdc:638a10778451ae6f17dcea786424731d INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, Assembly Activity for nmdc:mga0ax21 INFO:root:PassingDataObject: nmdc:9641980460af2b2b5b960022bfbe6ba5 INFO:root:PassingDataObject: nmdc:31fade0dbd18fdea0ff83bf51a220641 -INFO:root:PassingDataObject: nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 -INFO:root:PassingDataObject: nmdc:eb266f15afb6a5af6bd054e1ce131d27 INFO:root:PassingDataObject: nmdc:82f7cca2b2cb17816eaf5076c2119064 +INFO:root:PassingDataObject: nmdc:eb266f15afb6a5af6bd054e1ce131d27 +INFO:root:PassingDataObject: nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, Annotation Activity for nmdc:mga0ax21 -INFO:root:PassingDataObject: nmdc:07db7f052e901f9658a22cb64a0dcc80 -INFO:root:PassingDataObject: nmdc:1d85780b7516a17cdf0a8130e7d6bf7a -INFO:root:PassingDataObject: nmdc:25728a5fe992ca53f01229aaa4ca883d -INFO:root:PassingDataObject: nmdc:e8c951a33616527c1dfbf7c60d16a140 -INFO:root:PassingDataObject: nmdc:212ddd235565ee2a3a23f656ef5c11ef -INFO:root:PassingDataObject: nmdc:b11a1e9aa66b412a75c487698e86c50f -INFO:root:PassingDataObject: nmdc:867f9e3df24de3af8c465a4cc6fbc38f -INFO:root:PassingDataObject: nmdc:bba26d98e46f49112ebc85ff026bbbfe INFO:root:PassingDataObject: nmdc:481d2d8fc1707b638992b2d8aa321d44 -INFO:root:PassingDataObject: nmdc:7f74a653aa175cb8af25d7a36d5e4049 INFO:root:PassingDataObject: nmdc:93dd3c5795f1f22db07b0d0d050575b3 +INFO:root:PassingDataObject: nmdc:e8c951a33616527c1dfbf7c60d16a140 INFO:root:PassingDataObject: nmdc:7ad1c505886f1da1d97510c6b6559926 +INFO:root:PassingDataObject: nmdc:212ddd235565ee2a3a23f656ef5c11ef INFO:root:PassingDataObject: nmdc:2367a415cb17d5072c3d0dbc7df42497 -INFO:root:PassingDataObject: nmdc:035167ba393f362b23d1594fbe5bf867 +INFO:root:PassingDataObject: nmdc:bba26d98e46f49112ebc85ff026bbbfe +INFO:root:PassingDataObject: nmdc:8a757f814f8127d836561112c8488e18 +INFO:root:PassingDataObject: nmdc:25728a5fe992ca53f01229aaa4ca883d +INFO:root:PassingDataObject: nmdc:867f9e3df24de3af8c465a4cc6fbc38f INFO:root:PassingDataObject: nmdc:21f1b613e4c499b8440e446dc56dcb6e +INFO:root:PassingDataObject: nmdc:7f74a653aa175cb8af25d7a36d5e4049 +INFO:root:PassingDataObject: nmdc:e38fb29e57183c5b7303423f4366cd79 +INFO:root:PassingDataObject: nmdc:035167ba393f362b23d1594fbe5bf867 INFO:root:PassingDataObject: nmdc:c15bb5be1c98ec6bc0d32820f1865607 +INFO:root:PassingDataObject: nmdc:b11a1e9aa66b412a75c487698e86c50f +INFO:root:PassingDataObject: nmdc:1d85780b7516a17cdf0a8130e7d6bf7a +INFO:root:PassingDataObject: nmdc:07db7f052e901f9658a22cb64a0dcc80 INFO:root:PassingDataObject: nmdc:6f3a915b03aeda1268fef75fffd189be -INFO:root:PassingDataObject: nmdc:8a757f814f8127d836561112c8488e18 -INFO:root:PassingDataObject: nmdc:e38fb29e57183c5b7303423f4366cd79 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138747 INFO:root:found 1 records INFO:root:record: nmdc:6d185b460547056744dd8ca62fc30644, MAGs Analysis Activity for nmdc:mga0ax21 -INFO:root:PassingDataObject: nmdc:56359f2efdc80e8d3fa33c417646e761 INFO:root:PassingDataObject: nmdc:2bdabe3b5cc97e738b32e452e7f5cf0f +INFO:root:PassingDataObject: nmdc:56359f2efdc80e8d3fa33c417646e761 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138747 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-qm563f05 INFO:root:legacy_id: gold:Gp0138752 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-qm563f05 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2112eaa62884c29f33a47669bf01bb53 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, Read QC Activity for nmdc:mga06298 INFO:root:PassingDataObject: nmdc:9846d490bcd85140cae6c67a671345ae INFO:root:PassingDataObject: nmdc:d426ff495a9885ec516546b9cd7e1d25 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, ReadBased Analysis Activity for nmdc:mga06298 +INFO:root:PassingDataObject: nmdc:6c422a61df4e276560c743e42e8777ac +INFO:root:PassingDataObject: nmdc:edf5c75c8744c683a6c3507972e60cf5 +INFO:root:PassingDataObject: nmdc:2002afa4bc29e198da0a63382b69a6f8 +INFO:root:PassingDataObject: nmdc:b5be335d73e9f43434f1f319dbe74602 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:0f21da30e01f45f336e29ebd9f9ebf90 ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:0f21da30e01f45f336e29ebd9f9ebf90 -ERROR:root:FailedDataObject: nmdc:4a4b1f88a4f6036b5df25f66eb530daa, ERROR:root:FailedDataObject: nmdc:8677affb1a3ae76bb8a9461603fc9e70, ERROR:root:FailedDataObject: nmdc:441aef0e4396e5adfa1e6cc4db45aebe, -ERROR:root:FailedDataObject: nmdc:6c422a61df4e276560c743e42e8777ac, -ERROR:root:FailedDataObject: nmdc:edf5c75c8744c683a6c3507972e60cf5, -ERROR:root:FailedDataObject: nmdc:b5be335d73e9f43434f1f319dbe74602, -ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:0f21da30e01f45f336e29ebd9f9ebf90 -ERROR:root:FailedDataObject: nmdc:2002afa4bc29e198da0a63382b69a6f8, +ERROR:root:FailedDataObject: nmdc:4a4b1f88a4f6036b5df25f66eb530daa, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, ReadBased Analysis Activity for nmdc:mga06298 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, Assembly Activity for nmdc:mga06298 +INFO:root:PassingDataObject: nmdc:3590b9c13f477435cb210006c9a088f7 +INFO:root:PassingDataObject: nmdc:d10910d29200afd36fbb483323f78910 INFO:root:PassingDataObject: nmdc:f49b70f2b86bdf6ab8de63ae6af22f13 INFO:root:PassingDataObject: nmdc:f9fcb7512bd57f6854980c6305e72da6 INFO:root:PassingDataObject: nmdc:435db0d40b74bc58f7012375f95a22dc -INFO:root:PassingDataObject: nmdc:3590b9c13f477435cb210006c9a088f7 -INFO:root:PassingDataObject: nmdc:d10910d29200afd36fbb483323f78910 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, Annotation Activity for nmdc:mga06298 -INFO:root:PassingDataObject: nmdc:9fce8be442004a4d2fed03d1da7079bb -INFO:root:PassingDataObject: nmdc:ee24adc352e764e6cee1cfecda6a5ad8 -INFO:root:PassingDataObject: nmdc:d6acef140a50fcc012ecfa7c9c558fef -INFO:root:PassingDataObject: nmdc:cf7c5ca97046cc4e0e6a70864452eda2 INFO:root:PassingDataObject: nmdc:5ffe451050d4fbcc4fb93d0c651930ab +INFO:root:PassingDataObject: nmdc:db89e43f96ec8c3ccd3524df4e9d0770 +INFO:root:PassingDataObject: nmdc:ee24adc352e764e6cee1cfecda6a5ad8 +INFO:root:PassingDataObject: nmdc:1e712a99872e63ddef10a987faec9b45 INFO:root:PassingDataObject: nmdc:3ae66b0e3dfbb191f63d7dc8c4244e26 -INFO:root:PassingDataObject: nmdc:dee146a18afbfe5c3cb1f78bb146f716 -INFO:root:PassingDataObject: nmdc:295aea96cf9041f2e13f8b92e0edf174 -INFO:root:PassingDataObject: nmdc:2992e4f3b779dec729a9d823c1aa3ad4 -INFO:root:PassingDataObject: nmdc:534398cc155a9ef4dea674f45eb0137e -INFO:root:PassingDataObject: nmdc:fa2c29098e45cf7c77455820ef4afb9a INFO:root:PassingDataObject: nmdc:79eeb9397774681d449c59997bd2d368 -INFO:root:PassingDataObject: nmdc:7aac85954e2ce8308c8f388cb3f0996e -INFO:root:PassingDataObject: nmdc:eb91c541ef4cbf9604786cada7d6f4d4 INFO:root:PassingDataObject: nmdc:709cfd47d101e6334780a379a162720a -INFO:root:PassingDataObject: nmdc:e831668e4c7bd285620078e5c1245103 -INFO:root:PassingDataObject: nmdc:1e712a99872e63ddef10a987faec9b45 -INFO:root:PassingDataObject: nmdc:db89e43f96ec8c3ccd3524df4e9d0770 INFO:root:PassingDataObject: nmdc:e55026bfb92d6ae37fe91a39fb817aa8 +INFO:root:PassingDataObject: nmdc:534398cc155a9ef4dea674f45eb0137e +INFO:root:PassingDataObject: nmdc:2992e4f3b779dec729a9d823c1aa3ad4 +INFO:root:PassingDataObject: nmdc:9fce8be442004a4d2fed03d1da7079bb +INFO:root:PassingDataObject: nmdc:dee146a18afbfe5c3cb1f78bb146f716 +INFO:root:PassingDataObject: nmdc:eb91c541ef4cbf9604786cada7d6f4d4 +INFO:root:PassingDataObject: nmdc:7aac85954e2ce8308c8f388cb3f0996e +INFO:root:PassingDataObject: nmdc:e831668e4c7bd285620078e5c1245103 +INFO:root:PassingDataObject: nmdc:295aea96cf9041f2e13f8b92e0edf174 +INFO:root:PassingDataObject: nmdc:fa2c29098e45cf7c77455820ef4afb9a +INFO:root:PassingDataObject: nmdc:cf7c5ca97046cc4e0e6a70864452eda2 +INFO:root:PassingDataObject: nmdc:d6acef140a50fcc012ecfa7c9c558fef INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138752 INFO:root:found 1 records INFO:root:record: nmdc:0f21da30e01f45f336e29ebd9f9ebf90, MAGs Analysis Activity for nmdc:mga06298 -INFO:root:PassingDataObject: nmdc:243a2e856cf6ae825dd09c52756e9a95 INFO:root:PassingDataObject: nmdc:e51316bc0f7ba609fe4d84d9e8de1f04 +INFO:root:PassingDataObject: nmdc:243a2e856cf6ae825dd09c52756e9a95 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138752 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-zvpsbf06 INFO:root:legacy_id: gold:Gp0138756 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zvpsbf06 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0afe727fea9effca194d4b1f607984ff INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, Read QC Activity for nmdc:mga0cc74 -INFO:root:PassingDataObject: nmdc:c927288230899c93bdf28348fc87b222 INFO:root:PassingDataObject: nmdc:9a24dab0d27071262c4fa2ae54edb2e7 +INFO:root:PassingDataObject: nmdc:c927288230899c93bdf28348fc87b222 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, ReadBased Analysis Activity for nmdc:mga0cc74 -INFO:root:PassingDataObject: nmdc:71d35d455a16985e82f221b57abb662d -INFO:root:PassingDataObject: nmdc:6df14e79b47a45571745ac1d9577ff55 -INFO:root:PassingDataObject: nmdc:21d2f0e1bd49b66eb71b6ce2599ee503 -INFO:root:PassingDataObject: nmdc:f737a4e9be8426619b91ab3e6cc0a681 INFO:root:PassingDataObject: nmdc:cd2fe7285199963f3a867971c9274343 +INFO:root:PassingDataObject: nmdc:6df14e79b47a45571745ac1d9577ff55 INFO:root:PassingDataObject: nmdc:3b99bfd06b67f44f2529e87d3f90327d +INFO:root:PassingDataObject: nmdc:f737a4e9be8426619b91ab3e6cc0a681 +INFO:root:PassingDataObject: nmdc:21d2f0e1bd49b66eb71b6ce2599ee503 INFO:root:PassingDataObject: nmdc:788e20bad88f057e08bb1a9ef55d1050 -INFO:root:PassingDataObject: nmdc:854c197884c2ba55cb13d2b9eb3f4c8e INFO:root:PassingDataObject: nmdc:eaa014c659b30a6c17fb6650d11ab769 +INFO:root:PassingDataObject: nmdc:854c197884c2ba55cb13d2b9eb3f4c8e +INFO:root:PassingDataObject: nmdc:71d35d455a16985e82f221b57abb662d INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, Assembly Activity for nmdc:mga0cc74 INFO:root:PassingDataObject: nmdc:508ec6f2b952632f50ecdd8c68db34fb +INFO:root:PassingDataObject: nmdc:a2107a8bc1a5ae7c52b27320e1bb34e2 INFO:root:PassingDataObject: nmdc:243925579b9f4fb9ae43011ced963695 -INFO:root:PassingDataObject: nmdc:6aabe721c4a7185940b57f413e551390 INFO:root:PassingDataObject: nmdc:1f32e6cfc089edd4d67844621dd5e9ac -INFO:root:PassingDataObject: nmdc:a2107a8bc1a5ae7c52b27320e1bb34e2 +INFO:root:PassingDataObject: nmdc:6aabe721c4a7185940b57f413e551390 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, Annotation Activity for nmdc:mga0cc74 -INFO:root:PassingDataObject: nmdc:93f8805563b3e4626d585c52831334c2 -INFO:root:PassingDataObject: nmdc:4480d59bdc1a3fb6a72b02086a0b168c INFO:root:PassingDataObject: nmdc:2ffc11a6fa92e580f0aeee2864e83dee +INFO:root:PassingDataObject: nmdc:29c7a6cec513bb3707055530213bcca2 +INFO:root:PassingDataObject: nmdc:fdd1a028483e33733954f52efa0f8cd9 +INFO:root:PassingDataObject: nmdc:af527514713d74f2952a05d657905a65 +INFO:root:PassingDataObject: nmdc:21279872e8a060917882b5011706dce1 +INFO:root:PassingDataObject: nmdc:93f8805563b3e4626d585c52831334c2 +INFO:root:PassingDataObject: nmdc:94409385b8940b5494d5503a9b6f6ac2 +INFO:root:PassingDataObject: nmdc:9720ba31335efa8e153de035d59cb45c INFO:root:PassingDataObject: nmdc:3be4ecc188907180e0fe1b0f886e9958 -INFO:root:PassingDataObject: nmdc:2f3824e27f3daa5c3d0cefe661b54062 INFO:root:PassingDataObject: nmdc:3dacf6b9e33fc5cf0eb65d37dc7f7962 -INFO:root:PassingDataObject: nmdc:94409385b8940b5494d5503a9b6f6ac2 INFO:root:PassingDataObject: nmdc:a95c9d2684e9f84d37a675785e99b28c -INFO:root:PassingDataObject: nmdc:37f98b72ebf6ef5fffa5e007339c1aa4 -INFO:root:PassingDataObject: nmdc:9720ba31335efa8e153de035d59cb45c INFO:root:PassingDataObject: nmdc:443a40650cf71bb9644e93505b53b584 -INFO:root:PassingDataObject: nmdc:fdd1a028483e33733954f52efa0f8cd9 -INFO:root:PassingDataObject: nmdc:b1340ffd145638653e009fb35169c6f3 INFO:root:PassingDataObject: nmdc:e31f60b50614555bef034bba6e800728 -INFO:root:PassingDataObject: nmdc:af527514713d74f2952a05d657905a65 -INFO:root:PassingDataObject: nmdc:29a79f42a43f5241de6bf84f4e0dc424 +INFO:root:PassingDataObject: nmdc:37f98b72ebf6ef5fffa5e007339c1aa4 INFO:root:PassingDataObject: nmdc:e496ad9f5505976721f83631f2151936 -INFO:root:PassingDataObject: nmdc:21279872e8a060917882b5011706dce1 -INFO:root:PassingDataObject: nmdc:29c7a6cec513bb3707055530213bcca2 +INFO:root:PassingDataObject: nmdc:b1340ffd145638653e009fb35169c6f3 +INFO:root:PassingDataObject: nmdc:29a79f42a43f5241de6bf84f4e0dc424 +INFO:root:PassingDataObject: nmdc:4480d59bdc1a3fb6a72b02086a0b168c +INFO:root:PassingDataObject: nmdc:2f3824e27f3daa5c3d0cefe661b54062 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138756 INFO:root:found 1 records INFO:root:record: nmdc:899fff535ea5b4c4336718366204c6a5, MAGs Analysis Activity for nmdc:mga0cc74 -INFO:root:PassingDataObject: nmdc:c11461ff1cdb7397ccda163d48d31776 INFO:root:PassingDataObject: nmdc:098301a1ebdeda5b60ef94f9e6240140 +INFO:root:PassingDataObject: nmdc:c11461ff1cdb7397ccda163d48d31776 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138756 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-sdbbqs35 INFO:root:legacy_id: gold:Gp0138750 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-sdbbqs35 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b0638ba985a67df56f072b7544e46317 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, Read QC Activity for nmdc:mga0v998 INFO:root:PassingDataObject: nmdc:80bafe68c83e4be83b2ada0e5f1dee0c INFO:root:PassingDataObject: nmdc:36d4295f78e33152b9f0a2d60eaf4648 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, ReadBased Analysis Activity for nmdc:mga0v998 -INFO:root:PassingDataObject: nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 -INFO:root:PassingDataObject: nmdc:187ed60485c2a08b6fde0191a4332f3b INFO:root:PassingDataObject: nmdc:cca621d7bee98da5f55ccbcf3f296342 +INFO:root:PassingDataObject: nmdc:187ed60485c2a08b6fde0191a4332f3b +INFO:root:PassingDataObject: nmdc:8c484cee43b39868f216cfc9f89e77ba +INFO:root:PassingDataObject: nmdc:d55beb8645eff57d8806666e570d2d3e +INFO:root:PassingDataObject: nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 INFO:root:PassingDataObject: nmdc:d61542ab86302b9f661b10e7a90c9bb1 +INFO:root:PassingDataObject: nmdc:fe7efd7d37ed3c916db73af90e6b4656 INFO:root:PassingDataObject: nmdc:78972c7f2b3eb2c6ae4041ae696aae90 INFO:root:PassingDataObject: nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 -INFO:root:PassingDataObject: nmdc:fe7efd7d37ed3c916db73af90e6b4656 -INFO:root:PassingDataObject: nmdc:8c484cee43b39868f216cfc9f89e77ba -INFO:root:PassingDataObject: nmdc:d55beb8645eff57d8806666e570d2d3e INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, Assembly Activity for nmdc:mga0v998 -INFO:root:PassingDataObject: nmdc:b9135feeee2c737cd11c9ff504e87689 -INFO:root:PassingDataObject: nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f INFO:root:PassingDataObject: nmdc:3d92c122124714a61cdedd87dc2e460d -INFO:root:PassingDataObject: nmdc:2e0348e43569d2a8b15c9ba4796af819 INFO:root:PassingDataObject: nmdc:108c62768293874eb901fa014d98c07a +INFO:root:PassingDataObject: nmdc:2e0348e43569d2a8b15c9ba4796af819 +INFO:root:PassingDataObject: nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f +INFO:root:PassingDataObject: nmdc:b9135feeee2c737cd11c9ff504e87689 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, Annotation Activity for nmdc:mga0v998 -INFO:root:PassingDataObject: nmdc:3151d14197caa94c14704d5c490cd656 -INFO:root:PassingDataObject: nmdc:19b2392db2bf373101f1e3e9a168e2a7 -INFO:root:PassingDataObject: nmdc:c7ebc2c733f940860c075c216bc0edc0 INFO:root:PassingDataObject: nmdc:00914ce09c851219c3a31dc529c12fa0 -INFO:root:PassingDataObject: nmdc:f796e6276621646e8b57cf1be1521891 -INFO:root:PassingDataObject: nmdc:890ef0d74c1f6ca75a218f5ea085141c -INFO:root:PassingDataObject: nmdc:e1987a4c7fe19b1a38fd23160a305063 +INFO:root:PassingDataObject: nmdc:53d5ba3bcd55905036bb01f1c6511569 INFO:root:PassingDataObject: nmdc:539e7611cb5f4369f32e846112d35685 -INFO:root:PassingDataObject: nmdc:39211ac51085cf49b17f735a9badb3bb -INFO:root:PassingDataObject: nmdc:9b030203060e81edb8ea324dbd6b1ce9 -INFO:root:PassingDataObject: nmdc:8b130f5a554394acc83fecb796d4b4db -INFO:root:PassingDataObject: nmdc:2822cd42988fd5b05558782aa1389f62 INFO:root:PassingDataObject: nmdc:820e8cdcfdb20475881246befac20b5d +INFO:root:PassingDataObject: nmdc:39211ac51085cf49b17f735a9badb3bb +INFO:root:PassingDataObject: nmdc:f796e6276621646e8b57cf1be1521891 INFO:root:PassingDataObject: nmdc:52723c61fd123544bc2b4446ae2cb56f -INFO:root:PassingDataObject: nmdc:53d5ba3bcd55905036bb01f1c6511569 +INFO:root:PassingDataObject: nmdc:890ef0d74c1f6ca75a218f5ea085141c +INFO:root:PassingDataObject: nmdc:19b2392db2bf373101f1e3e9a168e2a7 +INFO:root:PassingDataObject: nmdc:7a6eabbd03ad27ffc06049b155535cf9 +INFO:root:PassingDataObject: nmdc:8b130f5a554394acc83fecb796d4b4db +INFO:root:PassingDataObject: nmdc:c7ebc2c733f940860c075c216bc0edc0 INFO:root:PassingDataObject: nmdc:322de8109bec500b6e8a4ce32e248654 +INFO:root:PassingDataObject: nmdc:e1987a4c7fe19b1a38fd23160a305063 INFO:root:PassingDataObject: nmdc:dbe6917a6b943cfa586cc8453ed3e8cd -INFO:root:PassingDataObject: nmdc:7a6eabbd03ad27ffc06049b155535cf9 +INFO:root:PassingDataObject: nmdc:3151d14197caa94c14704d5c490cd656 +INFO:root:PassingDataObject: nmdc:9b030203060e81edb8ea324dbd6b1ce9 +INFO:root:PassingDataObject: nmdc:2822cd42988fd5b05558782aa1389f62 INFO:root:PassingDataObject: nmdc:08ccb3a3d80869578a39a51837498642 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138750 INFO:root:found 1 records INFO:root:record: nmdc:388f437e34b2719969fbca505275632e, MAGs Analysis Activity for nmdc:mga0v998 INFO:root:PassingDataObject: nmdc:90764008f8ec0179b25654ea200774f5 INFO:root:PassingDataObject: nmdc:277aa42284aacc782436f05b35763182 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138750 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-wjagc521 INFO:root:legacy_id: gold:Gp0138755 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-wjagc521 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:087821706edc18d844ab743ec8865569 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, Read QC Activity for nmdc:mga0zr57 INFO:root:PassingDataObject: nmdc:7c5ac69dd2d1161ed0df49e112752296 INFO:root:PassingDataObject: nmdc:585ad0fedbbd08dfea2d28a7b3ad6ccd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, ReadBased Analysis Activity for nmdc:mga0zr57 -INFO:root:PassingDataObject: nmdc:0dac6f4bf0bcf2b06450acb586b411f2 -INFO:root:PassingDataObject: nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 -INFO:root:PassingDataObject: nmdc:1f7cc34d80fb00b557c9636a1a495b27 INFO:root:PassingDataObject: nmdc:b46b161f2f61fe392d93059b2ec257ad -INFO:root:PassingDataObject: nmdc:5065c2a76ab916e8866d3836cd469534 INFO:root:PassingDataObject: nmdc:4fa688952a54066e7aa33a62c42ef037 -INFO:root:PassingDataObject: nmdc:f355a874a6d82e6bf13bfd516cebbdd1 +INFO:root:PassingDataObject: nmdc:0dac6f4bf0bcf2b06450acb586b411f2 +INFO:root:PassingDataObject: nmdc:5065c2a76ab916e8866d3836cd469534 INFO:root:PassingDataObject: nmdc:45b079f76ebc5363d5e31b67968a90f7 INFO:root:PassingDataObject: nmdc:4a8c6bb81833bd93fb2941c292dc743e +INFO:root:PassingDataObject: nmdc:f355a874a6d82e6bf13bfd516cebbdd1 +INFO:root:PassingDataObject: nmdc:1f7cc34d80fb00b557c9636a1a495b27 +INFO:root:PassingDataObject: nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, Assembly Activity for nmdc:mga0zr57 -INFO:root:PassingDataObject: nmdc:2051c3848f8882f76acca2240af778ee +INFO:root:PassingDataObject: nmdc:ade85cb793b2c8272aab74e8064c4d94 +INFO:root:PassingDataObject: nmdc:689a1c1553dd39e32b2b089b33f05e7d INFO:root:PassingDataObject: nmdc:40212546ef6fdee6393a1e05c23c4722 +INFO:root:PassingDataObject: nmdc:2051c3848f8882f76acca2240af778ee INFO:root:PassingDataObject: nmdc:4a2f73f009c688aee3294b7bfb0f5d8f -INFO:root:PassingDataObject: nmdc:689a1c1553dd39e32b2b089b33f05e7d -INFO:root:PassingDataObject: nmdc:ade85cb793b2c8272aab74e8064c4d94 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, Annotation Activity for nmdc:mga0zr57 -INFO:root:PassingDataObject: nmdc:fa5063f9effae7f0cc32c6f97e7b748c -INFO:root:PassingDataObject: nmdc:339e252b7462307fb7579ec64fcfc67a INFO:root:PassingDataObject: nmdc:d87c7b26d832cb593a036002180af0cb +INFO:root:PassingDataObject: nmdc:17026eb88c6b8ca1646a63155991d3a0 +INFO:root:PassingDataObject: nmdc:cd106d54776419d9d36e8bae493f6d76 INFO:root:PassingDataObject: nmdc:6570df23e8028c7b73aa0211cae8f081 -INFO:root:PassingDataObject: nmdc:c53d2c466de78da687550f49a41c85eb +INFO:root:PassingDataObject: nmdc:a8e4a85b9f9c80f6d26fb8f9f36283f3 INFO:root:PassingDataObject: nmdc:95420e60a53b31b4469dd81f8a3476af -INFO:root:PassingDataObject: nmdc:1a3929bd9de59fd7e7cd95267350a4ba +INFO:root:PassingDataObject: nmdc:c53d2c466de78da687550f49a41c85eb INFO:root:PassingDataObject: nmdc:d92cac3892e5ffa68766ff050cbea4bc -INFO:root:PassingDataObject: nmdc:d424b33d3d044ecd47bddcf1e75e1ea3 -INFO:root:PassingDataObject: nmdc:47a839d3bd970f10561df111fe4498b6 -INFO:root:PassingDataObject: nmdc:a8e4a85b9f9c80f6d26fb8f9f36283f3 -INFO:root:PassingDataObject: nmdc:17026eb88c6b8ca1646a63155991d3a0 -INFO:root:PassingDataObject: nmdc:78083dfc890ae2e08b040f9245588d92 +INFO:root:PassingDataObject: nmdc:fa5063f9effae7f0cc32c6f97e7b748c INFO:root:PassingDataObject: nmdc:bd3fa2935a63140cec1b2f78186f6538 -INFO:root:PassingDataObject: nmdc:5d0e221bd1858596b7398f51a0c7be7c -INFO:root:PassingDataObject: nmdc:907e1fc53c263a466bf6ef9f80c64e30 -INFO:root:PassingDataObject: nmdc:cd106d54776419d9d36e8bae493f6d76 +INFO:root:PassingDataObject: nmdc:339e252b7462307fb7579ec64fcfc67a INFO:root:PassingDataObject: nmdc:cf2d91ff20575c0f5108c32b98e17b66 INFO:root:PassingDataObject: nmdc:f63b72f56612c987c3633dba5cf19f93 +INFO:root:PassingDataObject: nmdc:907e1fc53c263a466bf6ef9f80c64e30 +INFO:root:PassingDataObject: nmdc:1a3929bd9de59fd7e7cd95267350a4ba +INFO:root:PassingDataObject: nmdc:47a839d3bd970f10561df111fe4498b6 +INFO:root:PassingDataObject: nmdc:5d0e221bd1858596b7398f51a0c7be7c +INFO:root:PassingDataObject: nmdc:d424b33d3d044ecd47bddcf1e75e1ea3 +INFO:root:PassingDataObject: nmdc:78083dfc890ae2e08b040f9245588d92 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138755 INFO:root:found 1 records INFO:root:record: nmdc:48a6d56325c5587309f8c9f0c43b72d2, MAGs Analysis Activity for nmdc:mga0zr57 INFO:root:PassingDataObject: nmdc:90216e81897093b423bd74b62c79b93f INFO:root:PassingDataObject: nmdc:f47a9c6a3ba86999c2bcabb1bf6cfef6 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138755 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-mpwyy287 INFO:root:legacy_id: gold:Gp0138760 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-mpwyy287 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9a18a44f56928a2d4cb4e1541e182799 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138760 INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, Read QC Activity for nmdc:mga0bn46 -INFO:root:PassingDataObject: nmdc:0597993d81c0788daf5974490cef7f40 INFO:root:PassingDataObject: nmdc:907d264ce66897366174ab1c9ac87b88 +INFO:root:PassingDataObject: nmdc:0597993d81c0788daf5974490cef7f40 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138760 INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, ReadBased Analysis Activity for nmdc:mga0bn46 INFO:root:PassingDataObject: nmdc:3689750ab107b9a250599dc304de7a02 -INFO:root:PassingDataObject: nmdc:dc6ab16aa3a0073a1914e885cb463655 INFO:root:PassingDataObject: nmdc:9e4b3a8a0bde60626d00d335248b5eb8 -INFO:root:PassingDataObject: nmdc:4d575a3c8ac62938cf78cea02d3d57bc INFO:root:PassingDataObject: nmdc:fdbcf2b451e44e40f0afa535371531c4 INFO:root:PassingDataObject: nmdc:04e4304630e24100383eae8a58c8579c -INFO:root:PassingDataObject: nmdc:23c0c12d2aeaf1080ca536fa7695d7ac -INFO:root:PassingDataObject: nmdc:7bddcb460f521571aa422eb79cfeb24a +INFO:root:PassingDataObject: nmdc:4d575a3c8ac62938cf78cea02d3d57bc INFO:root:PassingDataObject: nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 +INFO:root:PassingDataObject: nmdc:dc6ab16aa3a0073a1914e885cb463655 +INFO:root:PassingDataObject: nmdc:7bddcb460f521571aa422eb79cfeb24a +INFO:root:PassingDataObject: nmdc:23c0c12d2aeaf1080ca536fa7695d7ac INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138760 INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, Assembly Activity for nmdc:mga0bn46 -INFO:root:PassingDataObject: nmdc:41fcb1932d70ad158bd64467f587a7e9 -INFO:root:PassingDataObject: nmdc:61f37cef4009a10fe186a734cc66df57 -INFO:root:PassingDataObject: nmdc:019f39760fdc004add2ee15e6f96b695 INFO:root:PassingDataObject: nmdc:0e0836aceb5837d49208da0304223b6a INFO:root:PassingDataObject: nmdc:29712e8e940103416e599270361200fd +INFO:root:PassingDataObject: nmdc:41fcb1932d70ad158bd64467f587a7e9 +INFO:root:PassingDataObject: nmdc:019f39760fdc004add2ee15e6f96b695 +INFO:root:PassingDataObject: nmdc:61f37cef4009a10fe186a734cc66df57 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138760 INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, Annotation Activity for nmdc:mga0bn46 -INFO:root:PassingDataObject: nmdc:6241fab001dfdd86b4cd1bf35f04cac2 -INFO:root:PassingDataObject: nmdc:f2dd383c83182aad458055a6f34815c7 INFO:root:PassingDataObject: nmdc:de5a7745734909fd6920a2e409cc7bdd -INFO:root:PassingDataObject: nmdc:6741858b335b1eee6fafbb3229a87fae +INFO:root:PassingDataObject: nmdc:730b2026c67d6815cac52bf6dca62eea +INFO:root:PassingDataObject: nmdc:307cfc8b79bca1354400c72fc3d23b33 +INFO:root:PassingDataObject: nmdc:f2dd383c83182aad458055a6f34815c7 +INFO:root:PassingDataObject: nmdc:868393c5f697f07f909f49352bd75ca1 +INFO:root:PassingDataObject: nmdc:7bf85dc29e4f1f9c56984b8dcd69a24a +INFO:root:PassingDataObject: nmdc:fd1829c2e254158910c000feafe53e53 +INFO:root:PassingDataObject: nmdc:6241fab001dfdd86b4cd1bf35f04cac2 +INFO:root:PassingDataObject: nmdc:8dc3556f5e05ccd75d10d1276c32248e INFO:root:PassingDataObject: nmdc:1f25c1b265fca41bdadd1f0eb1face51 -INFO:root:PassingDataObject: nmdc:80977c36a42bd6955108843bb6247a83 INFO:root:PassingDataObject: nmdc:ade9d20d7f692cfedc292c15d158d283 -INFO:root:PassingDataObject: nmdc:fd1829c2e254158910c000feafe53e53 +INFO:root:PassingDataObject: nmdc:33ccb09e5ece2a73dfba3a5d09dd161c INFO:root:PassingDataObject: nmdc:b58995cdb5b939193ad4afd0f351eaf6 -INFO:root:PassingDataObject: nmdc:730b2026c67d6815cac52bf6dca62eea -INFO:root:PassingDataObject: nmdc:868393c5f697f07f909f49352bd75ca1 -INFO:root:PassingDataObject: nmdc:4959d6c93fb9255a0abc12d789b31d0a INFO:root:PassingDataObject: nmdc:eaf38bc13e6a330501c6c72f64c98355 -INFO:root:PassingDataObject: nmdc:8dc3556f5e05ccd75d10d1276c32248e -INFO:root:PassingDataObject: nmdc:19a90fea6aacf28a34b0582d77a21558 -INFO:root:PassingDataObject: nmdc:307cfc8b79bca1354400c72fc3d23b33 INFO:root:PassingDataObject: nmdc:9c5befa5a91ba9649576d8a3876ab898 -INFO:root:PassingDataObject: nmdc:33ccb09e5ece2a73dfba3a5d09dd161c -INFO:root:PassingDataObject: nmdc:7bf85dc29e4f1f9c56984b8dcd69a24a +INFO:root:PassingDataObject: nmdc:6741858b335b1eee6fafbb3229a87fae +INFO:root:PassingDataObject: nmdc:19a90fea6aacf28a34b0582d77a21558 +INFO:root:PassingDataObject: nmdc:4959d6c93fb9255a0abc12d789b31d0a +INFO:root:PassingDataObject: nmdc:80977c36a42bd6955108843bb6247a83 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138760 INFO:root:found 1 records INFO:root:record: nmdc:d00392c1c956b9d5fabee8b942d3be8c, MAGs Analysis Activity for nmdc:mga0bn46 -INFO:root:PassingDataObject: nmdc:5e0cd6fcadf5af3087da5da3dfaa20d4 INFO:root:PassingDataObject: nmdc:de5a61d22718e40da4f5d21091bdf9b0 +INFO:root:PassingDataObject: nmdc:5e0cd6fcadf5af3087da5da3dfaa20d4 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138760 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-07688c39 INFO:root:legacy_id: gold:Gp0138758 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-07688c39 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:60ee79e73d43651cee0e89de0c346a20 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, Read QC Activity for nmdc:mga0q218 -INFO:root:PassingDataObject: nmdc:c2162fd224d6f4c48062c525bcb68fdd INFO:root:PassingDataObject: nmdc:b0c8be1c03c6f7b03e021001c26a9c7d +INFO:root:PassingDataObject: nmdc:c2162fd224d6f4c48062c525bcb68fdd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, ReadBased Analysis Activity for nmdc:mga0q218 INFO:root:PassingDataObject: nmdc:22ae2a542b60fd0a56c098eef57d0a6d +INFO:root:PassingDataObject: nmdc:b7792943f7c8945b0bb5ac090138dc47 +INFO:root:PassingDataObject: nmdc:4db292aa09f3bd8064dd7898f2b1d33f INFO:root:PassingDataObject: nmdc:9b62a2b2be1c8f92ae1350b08ee06b8c INFO:root:PassingDataObject: nmdc:cd0e56f9403edd807ddb8ac2058df494 -INFO:root:PassingDataObject: nmdc:b7792943f7c8945b0bb5ac090138dc47 -INFO:root:PassingDataObject: nmdc:257e2026c3edbe6bb07c5e97d47fa33a INFO:root:PassingDataObject: nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d -INFO:root:PassingDataObject: nmdc:4db292aa09f3bd8064dd7898f2b1d33f -INFO:root:PassingDataObject: nmdc:2ce3f4a57144426843cb82a9c36c23f9 INFO:root:PassingDataObject: nmdc:c23a5200a4850523bf1b71eb2df31cb9 +INFO:root:PassingDataObject: nmdc:257e2026c3edbe6bb07c5e97d47fa33a +INFO:root:PassingDataObject: nmdc:2ce3f4a57144426843cb82a9c36c23f9 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, Assembly Activity for nmdc:mga0q218 -INFO:root:PassingDataObject: nmdc:84aaf5070762e47f15b2d54581545ae9 INFO:root:PassingDataObject: nmdc:ee11987d24b07a3e387659dab2b99980 +INFO:root:PassingDataObject: nmdc:84aaf5070762e47f15b2d54581545ae9 INFO:root:PassingDataObject: nmdc:16f600725c836803f8a3cc62ec884669 INFO:root:PassingDataObject: nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb INFO:root:PassingDataObject: nmdc:73859fd8b67980b7c1a3cb631229f115 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, Annotation Activity for nmdc:mga0q218 -INFO:root:PassingDataObject: nmdc:587a03ec4f74dac64601f6174ca5319d -INFO:root:PassingDataObject: nmdc:eee853cbe7e328376938c4bffb1ac835 -INFO:root:PassingDataObject: nmdc:2b1c6c715797a18175685584fa82704c -INFO:root:PassingDataObject: nmdc:c5e17e9aa7db09bcd540d412cddb85fe -INFO:root:PassingDataObject: nmdc:01037ec8538c67c4db400a8df201f0f9 -INFO:root:PassingDataObject: nmdc:62f04f8104493ab3670ef55c487b5f70 -INFO:root:PassingDataObject: nmdc:ce82ec130d73ab431827889719122bb0 -INFO:root:PassingDataObject: nmdc:fecd69b1263d37746e3a696f2313d46b +INFO:root:PassingDataObject: nmdc:e8315390ed3636c7f93ab4c33b29669f +INFO:root:PassingDataObject: nmdc:bf76f21006977a925cb3f8060cad8f3a INFO:root:PassingDataObject: nmdc:036508ba2c006c93738d2a31cc24446f INFO:root:PassingDataObject: nmdc:261c00531c2d69bd4071a56e8ac198fc +INFO:root:PassingDataObject: nmdc:fecd69b1263d37746e3a696f2313d46b +INFO:root:PassingDataObject: nmdc:dec243019b9431efb34fa1c16f478edb +INFO:root:PassingDataObject: nmdc:ce82ec130d73ab431827889719122bb0 +INFO:root:PassingDataObject: nmdc:01037ec8538c67c4db400a8df201f0f9 +INFO:root:PassingDataObject: nmdc:67bd8aa78ff8b56fb36668d62af4adb6 INFO:root:PassingDataObject: nmdc:c25838ecbaca88cfa49024b5a54e862c +INFO:root:PassingDataObject: nmdc:62f04f8104493ab3670ef55c487b5f70 +INFO:root:PassingDataObject: nmdc:4615115751d8fb276763023ca9d4253f INFO:root:PassingDataObject: nmdc:624dacbebe47a50bac1370b2d1050f0b -INFO:root:PassingDataObject: nmdc:67bd8aa78ff8b56fb36668d62af4adb6 INFO:root:PassingDataObject: nmdc:868f7c2348a1e9ef52b7b210400bd366 -INFO:root:PassingDataObject: nmdc:bf76f21006977a925cb3f8060cad8f3a -INFO:root:PassingDataObject: nmdc:dec243019b9431efb34fa1c16f478edb -INFO:root:PassingDataObject: nmdc:e8315390ed3636c7f93ab4c33b29669f -INFO:root:PassingDataObject: nmdc:4615115751d8fb276763023ca9d4253f +INFO:root:PassingDataObject: nmdc:c5e17e9aa7db09bcd540d412cddb85fe +INFO:root:PassingDataObject: nmdc:2b1c6c715797a18175685584fa82704c +INFO:root:PassingDataObject: nmdc:587a03ec4f74dac64601f6174ca5319d +INFO:root:PassingDataObject: nmdc:eee853cbe7e328376938c4bffb1ac835 INFO:root:PassingDataObject: nmdc:b778a3ebf9cb4dc78fe900d00ed7aac6 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138758 INFO:root:found 1 records INFO:root:record: nmdc:998e5af496879f993d9a2fd0c38c5f00, MAGs Analysis Activity for nmdc:mga0q218 -INFO:root:PassingDataObject: nmdc:033e5e2d1b0e01bc421de9fe4b30b7d3 INFO:root:PassingDataObject: nmdc:a210b954d0c0e8fce6c0d5cd337be0c6 +INFO:root:PassingDataObject: nmdc:033e5e2d1b0e01bc421de9fe4b30b7d3 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138758 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-6q7gzb26 INFO:root:legacy_id: gold:Gp0138759 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-6q7gzb26 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f5b5e247913c5cdb5511dff98d349ce2 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, Read QC Activity for nmdc:mga01584 INFO:root:PassingDataObject: nmdc:2429c25a417bf079f40db7740183c833 INFO:root:PassingDataObject: nmdc:bf4fe5773ebb36e816a55d34c1c54e16 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, ReadBased Analysis Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:99c2b08cc001838f05c50dea136449a4 +INFO:root:PassingDataObject: nmdc:f54d6d4971f33c2e6018c7cc01d70c54 INFO:root:PassingDataObject: nmdc:60d3c830723011c4663fc54d3b9ae8c2 -INFO:root:PassingDataObject: nmdc:47ef66b14c923740694c368b2f34bb36 -INFO:root:PassingDataObject: nmdc:88596ee0da2e8edd19fd39c208757bd2 INFO:root:PassingDataObject: nmdc:4c8cadd89f3b28a31a7b72eceae2274c INFO:root:PassingDataObject: nmdc:0b1b076e94e33b1417cf8ba0df8ed51f -INFO:root:PassingDataObject: nmdc:c2d98178b8c9f57abb06a362726ae64b -INFO:root:PassingDataObject: nmdc:f54d6d4971f33c2e6018c7cc01d70c54 +INFO:root:PassingDataObject: nmdc:47ef66b14c923740694c368b2f34bb36 +INFO:root:PassingDataObject: nmdc:99c2b08cc001838f05c50dea136449a4 +INFO:root:PassingDataObject: nmdc:88596ee0da2e8edd19fd39c208757bd2 INFO:root:PassingDataObject: nmdc:86bfc9d51061a804c95430240541b5ae +INFO:root:PassingDataObject: nmdc:c2d98178b8c9f57abb06a362726ae64b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, Assembly Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:bc422981525ab9157c3208633b332fb4 +INFO:root:PassingDataObject: nmdc:c7278c2de111b4ee333e3c0bef8edd6c INFO:root:PassingDataObject: nmdc:6ddc048297ca0e8ac05ca27697d05a43 -INFO:root:PassingDataObject: nmdc:328dbf8d5b36a966e33f6e58bf429850 INFO:root:PassingDataObject: nmdc:1da0fbcf3afbbfc32bf938ee99f6d01e -INFO:root:PassingDataObject: nmdc:c7278c2de111b4ee333e3c0bef8edd6c +INFO:root:PassingDataObject: nmdc:328dbf8d5b36a966e33f6e58bf429850 +INFO:root:PassingDataObject: nmdc:bc422981525ab9157c3208633b332fb4 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, Annotation Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:95e3eb18c32072024b444afd9009d35a -INFO:root:PassingDataObject: nmdc:fefb001056c2143fe609cd61037d547d -INFO:root:PassingDataObject: nmdc:614651ce4684a8f30c8979b9957cf5a9 +INFO:root:PassingDataObject: nmdc:8b655316ee1e40021b492014ded9d912 +INFO:root:PassingDataObject: nmdc:81230be560b9299d1a21509c80ff4c43 +INFO:root:PassingDataObject: nmdc:2027b59b5dcd91a497da17228a52691e INFO:root:PassingDataObject: nmdc:31da3a4bb36e97b537a8d6e87a996ec8 INFO:root:PassingDataObject: nmdc:c0c617b4c8b301b82c08f90af440920a -INFO:root:PassingDataObject: nmdc:5c01428ee9bd4b11b80200deb6d24489 -INFO:root:PassingDataObject: nmdc:e5a37efa47743649ad6b4957346ca00a -INFO:root:PassingDataObject: nmdc:a5ad7c97b5072a1aff01b329e23097c9 -INFO:root:PassingDataObject: nmdc:81230be560b9299d1a21509c80ff4c43 -INFO:root:PassingDataObject: nmdc:8b655316ee1e40021b492014ded9d912 +INFO:root:PassingDataObject: nmdc:0d9c1a0fb336e56bb7facebad150ef00 INFO:root:PassingDataObject: nmdc:e6d6a03a6e198618bdaaed8cd1e89f51 +INFO:root:PassingDataObject: nmdc:0eef63e595ab45b25f013d705054f1c2 +INFO:root:PassingDataObject: nmdc:bf27ab158b63fc7edd6f418763c9b23f INFO:root:PassingDataObject: nmdc:2aa4c91f4d075c9b4bc030959181291f -INFO:root:PassingDataObject: nmdc:0d9c1a0fb336e56bb7facebad150ef00 -INFO:root:PassingDataObject: nmdc:9c0cfffaf9f8c0e1487faeaf78cdfca8 -INFO:root:PassingDataObject: nmdc:0eef63e595ab45b25f013d705054f1c2 -INFO:root:PassingDataObject: nmdc:debbfaee244c70191cb5be49806e1523 -INFO:root:PassingDataObject: nmdc:2027b59b5dcd91a497da17228a52691e +INFO:root:PassingDataObject: nmdc:5c01428ee9bd4b11b80200deb6d24489 +INFO:root:PassingDataObject: nmdc:614651ce4684a8f30c8979b9957cf5a9 +INFO:root:PassingDataObject: nmdc:95e3eb18c32072024b444afd9009d35a +INFO:root:PassingDataObject: nmdc:a5ad7c97b5072a1aff01b329e23097c9 INFO:root:PassingDataObject: nmdc:3a952b40f57f0a6d62ab7ad5f668664d -INFO:root:PassingDataObject: nmdc:bf27ab158b63fc7edd6f418763c9b23f +INFO:root:PassingDataObject: nmdc:e5a37efa47743649ad6b4957346ca00a +INFO:root:PassingDataObject: nmdc:debbfaee244c70191cb5be49806e1523 +INFO:root:PassingDataObject: nmdc:fefb001056c2143fe609cd61037d547d +INFO:root:PassingDataObject: nmdc:9c0cfffaf9f8c0e1487faeaf78cdfca8 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138759 INFO:root:found 1 records INFO:root:record: nmdc:a3f181696a51fd9baab2c06e02de07a3, MAGs Analysis Activity for nmdc:mga01584 -INFO:root:PassingDataObject: nmdc:3b5e629858bf9f55bb11aed5e6004d84 INFO:root:PassingDataObject: nmdc:3b8dbe284f312d92fe34549072258f52 +INFO:root:PassingDataObject: nmdc:3b5e629858bf9f55bb11aed5e6004d84 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138759 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-pbwhv175 INFO:root:legacy_id: gold:Gp0138757 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-pbwhv175 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:5333beedf0b1a6aeac85fd52e0c954a6 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, Read QC Activity for nmdc:mga01v18 INFO:root:PassingDataObject: nmdc:a5152db67096ea0f81fb877973aba00f INFO:root:PassingDataObject: nmdc:3615e5d3379aae0d85bd244bb25b42a7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, ReadBased Analysis Activity for nmdc:mga01v18 +INFO:root:PassingDataObject: nmdc:f2b52b572c0373c72f8f26d9618b9cb0 +INFO:root:PassingDataObject: nmdc:2773b3a2eb23e390faad4e7d32f1bc31 +INFO:root:PassingDataObject: nmdc:d00d119e08edcb163485792a7ce8d5fa ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:613c66031f3a5c73716b02ade1cef55a -ERROR:root:FailedDataObject: nmdc:2773b3a2eb23e390faad4e7d32f1bc31, +ERROR:root:FailedDataObject: nmdc:dae0faa18cf1eabe702e127c8aa4125c, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:613c66031f3a5c73716b02ade1cef55a ERROR:root:FailedDataObject: nmdc:592714700d2296bcdf6aa4558bdfc0aa, ERROR:root:FailedDataObject: nmdc:4f4b5b5e33eb7820a6dbbf93ea8c8fbd, -ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:613c66031f3a5c73716b02ade1cef55a -ERROR:root:FailedDataObject: nmdc:d00d119e08edcb163485792a7ce8d5fa, ERROR:root:FailedDataObject: nmdc:77430d607016d4c31d260ca6dda18297, -ERROR:root:FailedDataObject: nmdc:f2b52b572c0373c72f8f26d9618b9cb0, -ERROR:root:FailedDataObject: nmdc:dae0faa18cf1eabe702e127c8aa4125c, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:613c66031f3a5c73716b02ade1cef55a, ReadBased Analysis Activity for nmdc:mga01v18 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, Assembly Activity for nmdc:mga01v18 +INFO:root:PassingDataObject: nmdc:37161ecacc5fc6ec47914e6fff906a80 INFO:root:PassingDataObject: nmdc:28f86aa5f580484f8e6a8c86fccb5810 -INFO:root:PassingDataObject: nmdc:e288183958c6d58c8e30c89e10eb4ae7 INFO:root:PassingDataObject: nmdc:b28dcf7c7b102b69889cbbedf4baa355 -INFO:root:PassingDataObject: nmdc:37161ecacc5fc6ec47914e6fff906a80 INFO:root:PassingDataObject: nmdc:df3e85ecef6137d5317d4993902353dd +INFO:root:PassingDataObject: nmdc:e288183958c6d58c8e30c89e10eb4ae7 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, Annotation Activity for nmdc:mga01v18 -INFO:root:PassingDataObject: nmdc:fbecaaaa10d978b57de4b51b03403322 INFO:root:PassingDataObject: nmdc:091e64a5f406cfb573914ba47069b764 -INFO:root:PassingDataObject: nmdc:e285d912f4b57efe6c3c2ff4123bcf2b -INFO:root:PassingDataObject: nmdc:c651e136777c2f0a579a01affd9510b1 +INFO:root:PassingDataObject: nmdc:c031febacc5e07f7ac07e1c020829a73 +INFO:root:PassingDataObject: nmdc:750dcf4d970a9d3abdd4c31d54bd318e +INFO:root:PassingDataObject: nmdc:a0c73a24bae29ef314852c09d69ee46b INFO:root:PassingDataObject: nmdc:b9f5cb09b64a9ed86471446a84979bca -INFO:root:PassingDataObject: nmdc:3a6e545cef97bf23c1be9fd8688b5451 -INFO:root:PassingDataObject: nmdc:439a7c65c974033ed218029502e1b774 INFO:root:PassingDataObject: nmdc:d3a129b0fd9ef4b82ec43e1a9006a54d -INFO:root:PassingDataObject: nmdc:77da754ecfb09510e55be7fed1ed024b +INFO:root:PassingDataObject: nmdc:28cc9221e7f9672d7a795e671e52b2e0 INFO:root:PassingDataObject: nmdc:36de686275f2f79249d0f2c2fe0afdbd -INFO:root:PassingDataObject: nmdc:750dcf4d970a9d3abdd4c31d54bd318e -INFO:root:PassingDataObject: nmdc:a0c73a24bae29ef314852c09d69ee46b INFO:root:PassingDataObject: nmdc:467f5b38df1ff25b05c4dccd5a05a9e6 INFO:root:PassingDataObject: nmdc:55d879f8c2ede34d3dd5ad35346e4166 -INFO:root:PassingDataObject: nmdc:28cc9221e7f9672d7a795e671e52b2e0 -INFO:root:PassingDataObject: nmdc:c031febacc5e07f7ac07e1c020829a73 +INFO:root:PassingDataObject: nmdc:77da754ecfb09510e55be7fed1ed024b +INFO:root:PassingDataObject: nmdc:fbecaaaa10d978b57de4b51b03403322 +INFO:root:PassingDataObject: nmdc:e285d912f4b57efe6c3c2ff4123bcf2b +INFO:root:PassingDataObject: nmdc:3a6e545cef97bf23c1be9fd8688b5451 INFO:root:PassingDataObject: nmdc:18e046ad8dc7c4a62fa014cc4b05d981 +INFO:root:PassingDataObject: nmdc:c651e136777c2f0a579a01affd9510b1 +INFO:root:PassingDataObject: nmdc:439a7c65c974033ed218029502e1b774 INFO:root:PassingDataObject: nmdc:957da35feb8639cb3f45ba330689a3e3 INFO:root:PassingDataObject: nmdc:4a5922f89ac6ca5af7904db23bb37184 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138757 INFO:root:found 1 records INFO:root:record: nmdc:613c66031f3a5c73716b02ade1cef55a, MAGs Analysis Activity for nmdc:mga01v18 -INFO:root:PassingDataObject: nmdc:60e241298428930d63db7fab1b94c1bb INFO:root:PassingDataObject: nmdc:2a622ee1ac7fc4c725127bbb06ee9851 +INFO:root:PassingDataObject: nmdc:60e241298428930d63db7fab1b94c1bb INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138757 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-gb5k8p40 INFO:root:legacy_id: gold:Gp0138762 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gb5k8p40 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9676ebc038756ae55077770846391495 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, Read QC Activity for nmdc:mga0mp52 INFO:root:PassingDataObject: nmdc:035767058c43f56c7df73c2420e8fcd1 INFO:root:PassingDataObject: nmdc:5c18b2f187dfeb5e12c74aa3b5757825 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, ReadBased Analysis Activity for nmdc:mga0mp52 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f -ERROR:root:FailedDataObject: nmdc:c8c0c6d46571baea281342f5ff91de37, -ERROR:root:FailedDataObject: nmdc:641dbcb1c7df646a0aecac1e0f8fa53d, -ERROR:root:FailedDataObject: nmdc:6c9e3d9698730b3baab9a001d82d7a52, -ERROR:root:FailedDataObject: nmdc:a63d0beada28634e20ccfa00eb9743af, +INFO:root:PassingDataObject: nmdc:c8c0c6d46571baea281342f5ff91de37 +INFO:root:PassingDataObject: nmdc:a63d0beada28634e20ccfa00eb9743af +INFO:root:PassingDataObject: nmdc:641dbcb1c7df646a0aecac1e0f8fa53d +INFO:root:PassingDataObject: nmdc:520c60f3291ad53775b51cc0fca25d7b ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f -ERROR:root:FailedDataObject: nmdc:520c60f3291ad53775b51cc0fca25d7b, ERROR:root:FailedDataObject: nmdc:c6543df54529af9301d47353fb48477d, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f +ERROR:root:FailedDataObject: nmdc:6c9e3d9698730b3baab9a001d82d7a52, ERROR:root:FailedDataObject: nmdc:2e086c5762834ed4289f11e2df06bc3e, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, ReadBased Analysis Activity for nmdc:mga0mp52 @@ -2125,4254 +2355,4735 @@ ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, Assembly Activity for nmdc:mga0mp52 -INFO:root:PassingDataObject: nmdc:913d2163dd05fab3fc0d9a829a1f91d0 -INFO:root:PassingDataObject: nmdc:cecd611724e7889fb632c205f67b85cd -INFO:root:PassingDataObject: nmdc:94d4aa6301b03d885c76019351617a45 INFO:root:PassingDataObject: nmdc:f9c1313dfb5523d45f828410e805dedc INFO:root:PassingDataObject: nmdc:3deb0d9239ccc9a6603327b7bebb5dbb +INFO:root:PassingDataObject: nmdc:913d2163dd05fab3fc0d9a829a1f91d0 +INFO:root:PassingDataObject: nmdc:94d4aa6301b03d885c76019351617a45 +INFO:root:PassingDataObject: nmdc:cecd611724e7889fb632c205f67b85cd INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, Annotation Activity for nmdc:mga0mp52 -INFO:root:PassingDataObject: nmdc:e97de12425204304a66944be29063b10 -INFO:root:PassingDataObject: nmdc:a6944f08dabfa0c343d18ce109d538e5 -INFO:root:PassingDataObject: nmdc:e3ee49f2b58be4361b9aada53b3d2173 -INFO:root:PassingDataObject: nmdc:a104ff0a654182bf216d7733aa123bba -INFO:root:PassingDataObject: nmdc:628b1e5ec8ca3dfcdd0207b520198b9e +INFO:root:PassingDataObject: nmdc:ba33f3d4de0d123911b792df87db75e4 +INFO:root:PassingDataObject: nmdc:8eacdd4b48a167ed1c5f3bbb7733b222 +INFO:root:PassingDataObject: nmdc:e6bacfbf5eabaa43162491564fc09dd3 INFO:root:PassingDataObject: nmdc:f3eb8d79d253c27a6d1fadf64d34df52 -INFO:root:PassingDataObject: nmdc:2a355c2825b6243cad291efab77fcab4 -INFO:root:PassingDataObject: nmdc:69db56257ba1037535deb2b837af863e INFO:root:PassingDataObject: nmdc:f07fff4cc47ea27ccec79b3901d77bd6 +INFO:root:PassingDataObject: nmdc:902b562ed2fe7f457d3f311516540746 +INFO:root:PassingDataObject: nmdc:e3ee49f2b58be4361b9aada53b3d2173 +INFO:root:PassingDataObject: nmdc:028f96e163b14143bb23ceaeb656b28d INFO:root:PassingDataObject: nmdc:bba76f787ac2bb7164708421c4163137 -INFO:root:PassingDataObject: nmdc:41e453ebe29b544a8c446b2bc80ea150 -INFO:root:PassingDataObject: nmdc:e6bacfbf5eabaa43162491564fc09dd3 -INFO:root:PassingDataObject: nmdc:f925f773d4bd65d6290130e280a3c557 +INFO:root:PassingDataObject: nmdc:a104ff0a654182bf216d7733aa123bba +INFO:root:PassingDataObject: nmdc:e97de12425204304a66944be29063b10 INFO:root:PassingDataObject: nmdc:c9df8e748be5bc8a550f99944c825f3c -INFO:root:PassingDataObject: nmdc:902b562ed2fe7f457d3f311516540746 INFO:root:PassingDataObject: nmdc:ff20996adaabd9d13c9a81db871c9692 -INFO:root:PassingDataObject: nmdc:028f96e163b14143bb23ceaeb656b28d -INFO:root:PassingDataObject: nmdc:8eacdd4b48a167ed1c5f3bbb7733b222 -INFO:root:PassingDataObject: nmdc:ba33f3d4de0d123911b792df87db75e4 +INFO:root:PassingDataObject: nmdc:2a355c2825b6243cad291efab77fcab4 +INFO:root:PassingDataObject: nmdc:41e453ebe29b544a8c446b2bc80ea150 +INFO:root:PassingDataObject: nmdc:628b1e5ec8ca3dfcdd0207b520198b9e +INFO:root:PassingDataObject: nmdc:f925f773d4bd65d6290130e280a3c557 +INFO:root:PassingDataObject: nmdc:a6944f08dabfa0c343d18ce109d538e5 +INFO:root:PassingDataObject: nmdc:69db56257ba1037535deb2b837af863e INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138762 INFO:root:found 1 records INFO:root:record: nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f, MAGs Analysis Activity for nmdc:mga0mp52 INFO:root:PassingDataObject: nmdc:bc2cdc95f944caffbc694d1c66b014b2 INFO:root:PassingDataObject: nmdc:0d127e74d0043818ce9fd85289f75b28 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138762 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-xhnf2e85 INFO:root:legacy_id: gold:Gp0208359 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-xhnf2e85 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0df5ac2c9052a2b45cfd9578aaa562f7 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208359 INFO:root:found 1 records INFO:root:record: nmdc:a7817ed507f90c680b7c8d87df25bfdc, Read QC Activity for nmdc:mga0hr43 -INFO:root:PassingDataObject: nmdc:eb2b03b041c125d2fec7729976367d66 INFO:root:PassingDataObject: nmdc:42470018e775d9dc001d00d35eed7266 +INFO:root:PassingDataObject: nmdc:eb2b03b041c125d2fec7729976367d66 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208359 INFO:root:found 1 records INFO:root:record: nmdc:a7817ed507f90c680b7c8d87df25bfdc, ReadBased Analysis Activity for nmdc:mga0hr43 -INFO:root:PassingDataObject: nmdc:3ee5d7b361966acd41d3026be09f6153 -INFO:root:PassingDataObject: nmdc:62fa4c63db827ce9f26ca242f04d6ee7 +INFO:root:PassingDataObject: nmdc:10c60ea0bc3112617748a056e3d10884 INFO:root:PassingDataObject: nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 INFO:root:PassingDataObject: nmdc:a701444fa38828c5e0d8e91c25042a19 -INFO:root:PassingDataObject: nmdc:10c60ea0bc3112617748a056e3d10884 -INFO:root:PassingDataObject: nmdc:663b83cb3df49f525de52ae963570a18 -INFO:root:PassingDataObject: nmdc:6e04f5f38c4b5bba26ffff78245aa752 -INFO:root:PassingDataObject: nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d INFO:root:PassingDataObject: nmdc:3cc4b117ac9f1d11bb908f5ad8e51567 +INFO:root:PassingDataObject: nmdc:62fa4c63db827ce9f26ca242f04d6ee7 +INFO:root:PassingDataObject: nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d +INFO:root:PassingDataObject: nmdc:3ee5d7b361966acd41d3026be09f6153 +INFO:root:PassingDataObject: nmdc:6e04f5f38c4b5bba26ffff78245aa752 +INFO:root:PassingDataObject: nmdc:663b83cb3df49f525de52ae963570a18 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208359 INFO:root:found 1 records INFO:root:record: nmdc:a7817ed507f90c680b7c8d87df25bfdc, Assembly Activity for nmdc:mga0hr43 +INFO:root:PassingDataObject: nmdc:9c313ddb8f3093a92880762319e44582 INFO:root:PassingDataObject: nmdc:342fad07e0559d930a7946f9470b9108 -INFO:root:PassingDataObject: nmdc:03bf9b7496d0e06b73981e24e77e846b -INFO:root:PassingDataObject: nmdc:34c609c839345bb3b08a53c19681bf64 INFO:root:PassingDataObject: nmdc:f7ef26cb6f3ea8041c48ec69200f06f9 -INFO:root:PassingDataObject: nmdc:9c313ddb8f3093a92880762319e44582 +INFO:root:PassingDataObject: nmdc:34c609c839345bb3b08a53c19681bf64 +INFO:root:PassingDataObject: nmdc:03bf9b7496d0e06b73981e24e77e846b INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208359 INFO:root:found 1 records INFO:root:record: nmdc:a7817ed507f90c680b7c8d87df25bfdc, Annotation Activity for nmdc:mga0hr43 -INFO:root:PassingDataObject: nmdc:9f59457e5f1ed59a8b3eaad21cb342ab -INFO:root:PassingDataObject: nmdc:bd7187e8df68407535b0ef74a1a9f73e -INFO:root:PassingDataObject: nmdc:7798ad5c634bac1a3f01428bbd1c5b8b -INFO:root:PassingDataObject: nmdc:cd1cdf579ac39d793514e32ee3e86d58 -INFO:root:PassingDataObject: nmdc:f3ec0cfbfd92b874dc2f9da32b72f9d2 +INFO:root:PassingDataObject: nmdc:8606261f590907838f0345f429a7a53b INFO:root:PassingDataObject: nmdc:e95f91d997cbbcd44e6cbebb0a9fc853 -INFO:root:PassingDataObject: nmdc:236ecb62f40a1f32207126a1629eddbf -INFO:root:PassingDataObject: nmdc:1c8406c20b143085eae49a7435ab72b0 INFO:root:PassingDataObject: nmdc:965ef3fb21b86abe71d31991dfbf5ced -INFO:root:PassingDataObject: nmdc:1745b759a591fc4909a116cd54aa663e +INFO:root:PassingDataObject: nmdc:236ecb62f40a1f32207126a1629eddbf +INFO:root:PassingDataObject: nmdc:7fc1533396cbd5e645428e902aab4614 +INFO:root:PassingDataObject: nmdc:9f59457e5f1ed59a8b3eaad21cb342ab +INFO:root:PassingDataObject: nmdc:cd1cdf579ac39d793514e32ee3e86d58 INFO:root:PassingDataObject: nmdc:763effe2106adf145bbf915a4200ace1 -INFO:root:PassingDataObject: nmdc:0bf6cf367666a5acd860176140404f3e INFO:root:PassingDataObject: nmdc:edd899b2171711d90e603eeb16889628 -INFO:root:PassingDataObject: nmdc:7fc1533396cbd5e645428e902aab4614 -INFO:root:PassingDataObject: nmdc:fddb6df527d1a096f37039e173660665 -INFO:root:PassingDataObject: nmdc:8606261f590907838f0345f429a7a53b -INFO:root:PassingDataObject: nmdc:0f8c9a4f3f5a1c7e528736624a44a946 INFO:root:PassingDataObject: nmdc:8ae4da60f687a049f20a69d0b876162c +INFO:root:PassingDataObject: nmdc:1c8406c20b143085eae49a7435ab72b0 +INFO:root:PassingDataObject: nmdc:7798ad5c634bac1a3f01428bbd1c5b8b +INFO:root:PassingDataObject: nmdc:f3ec0cfbfd92b874dc2f9da32b72f9d2 +INFO:root:PassingDataObject: nmdc:0f8c9a4f3f5a1c7e528736624a44a946 +INFO:root:PassingDataObject: nmdc:0bf6cf367666a5acd860176140404f3e +INFO:root:PassingDataObject: nmdc:bd7187e8df68407535b0ef74a1a9f73e +INFO:root:PassingDataObject: nmdc:fddb6df527d1a096f37039e173660665 +INFO:root:PassingDataObject: nmdc:1745b759a591fc4909a116cd54aa663e INFO:root:PassingDataObject: nmdc:ea37d67626bd92b763b7ea00079a4c1d INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208359 INFO:root:found 1 records INFO:root:record: nmdc:a7817ed507f90c680b7c8d87df25bfdc, MAGs Analysis Activity for nmdc:mga0hr43 INFO:root:PassingDataObject: nmdc:8ad22d80446c03c8c5a64432277a47f4 INFO:root:PassingDataObject: nmdc:22cf688bd532de609a1537838986bf29 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208359 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-t4hk7066 INFO:root:legacy_id: gold:Gp0138763 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-t4hk7066 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:492b743dc4a3ab1c730dd0e12912d8d1 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138763 INFO:root:found 1 records INFO:root:record: nmdc:d2646debbfc0164979d65b81bf59d8c9, Read QC Activity for nmdc:mga0np53 -INFO:root:PassingDataObject: nmdc:d5fc6a53327d5f178b364a2b3db46c59 INFO:root:PassingDataObject: nmdc:fe83d2ab1225fd3abda2237f39367869 +INFO:root:PassingDataObject: nmdc:d5fc6a53327d5f178b364a2b3db46c59 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138763 INFO:root:found 1 records INFO:root:record: nmdc:d2646debbfc0164979d65b81bf59d8c9, ReadBased Analysis Activity for nmdc:mga0np53 -INFO:root:PassingDataObject: nmdc:4551b05f4691e200074eba9c269957a1 -INFO:root:PassingDataObject: nmdc:db4d41216a837e140d5974241bfe4c8c INFO:root:PassingDataObject: nmdc:dff52f085f09868fc1ad1ace14531279 -INFO:root:PassingDataObject: nmdc:91df102105d5bfd59f299da88dfff9d3 -INFO:root:PassingDataObject: nmdc:67b8e2a863e637123646ee6a635ef783 +INFO:root:PassingDataObject: nmdc:db4d41216a837e140d5974241bfe4c8c INFO:root:PassingDataObject: nmdc:4b9d33d6db6043274c8b60d086078d2b -INFO:root:PassingDataObject: nmdc:a20dae35d1650215bc907ba60821b935 INFO:root:PassingDataObject: nmdc:498f456b63f8c718ec9ea353d655830d +INFO:root:PassingDataObject: nmdc:a20dae35d1650215bc907ba60821b935 +INFO:root:PassingDataObject: nmdc:4551b05f4691e200074eba9c269957a1 +INFO:root:PassingDataObject: nmdc:91df102105d5bfd59f299da88dfff9d3 +INFO:root:PassingDataObject: nmdc:67b8e2a863e637123646ee6a635ef783 INFO:root:PassingDataObject: nmdc:ab5b836ecf40570430ee3feab915df37 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138763 INFO:root:found 1 records INFO:root:record: nmdc:d2646debbfc0164979d65b81bf59d8c9, Assembly Activity for nmdc:mga0np53 +INFO:root:PassingDataObject: nmdc:c2f66045a0f7470391fc964ce3e67f48 +INFO:root:PassingDataObject: nmdc:79879e11dee1f55621d2ec764bdd4585 INFO:root:PassingDataObject: nmdc:d60dc00d8089ccc9770a3cf19362fb7c -INFO:root:PassingDataObject: nmdc:43ec0c58f402d6f030f5815380870c17 INFO:root:PassingDataObject: nmdc:3774175616272168095e2ffe2833cdc9 -INFO:root:PassingDataObject: nmdc:79879e11dee1f55621d2ec764bdd4585 -INFO:root:PassingDataObject: nmdc:c2f66045a0f7470391fc964ce3e67f48 +INFO:root:PassingDataObject: nmdc:43ec0c58f402d6f030f5815380870c17 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138763 INFO:root:found 1 records INFO:root:record: nmdc:d2646debbfc0164979d65b81bf59d8c9, Annotation Activity for nmdc:mga0np53 -INFO:root:PassingDataObject: nmdc:0564bdc625d05147e42481afcd6fda50 -INFO:root:PassingDataObject: nmdc:ce34bb5413ca57928d16c0e383568532 -INFO:root:PassingDataObject: nmdc:ea1cc613a95eabd43826ef689847943c -INFO:root:PassingDataObject: nmdc:20a6818e80ab7cca402078bd14c29a93 -INFO:root:PassingDataObject: nmdc:703693765b1d09664b3dd893e5ea54e0 INFO:root:PassingDataObject: nmdc:91ed50fbbcb7fa8d0f8b630b72ce8465 +INFO:root:PassingDataObject: nmdc:7b1e2da3f6ca453d833038da79307eb5 +INFO:root:PassingDataObject: nmdc:9a8a6ff749049c965aee73a46fe71ee4 +INFO:root:PassingDataObject: nmdc:fabd259c4abbe2fa094b582ed270cfa0 +INFO:root:PassingDataObject: nmdc:c606519ad3b5a72db1f674cd7663d9f6 +INFO:root:PassingDataObject: nmdc:46a8b9846f639d3a68765d4368ad8af8 INFO:root:PassingDataObject: nmdc:605798a17b8df803f3855e3268377b2d INFO:root:PassingDataObject: nmdc:4cfda769067d48907cf4dcc8fedb6ed5 INFO:root:PassingDataObject: nmdc:6c491c73326ec24728a1555a8155be5f -INFO:root:PassingDataObject: nmdc:d5f439e869f6affaa7052fafb39e5cd0 -INFO:root:PassingDataObject: nmdc:c606519ad3b5a72db1f674cd7663d9f6 -INFO:root:PassingDataObject: nmdc:46a8b9846f639d3a68765d4368ad8af8 +INFO:root:PassingDataObject: nmdc:20a6818e80ab7cca402078bd14c29a93 +INFO:root:PassingDataObject: nmdc:a2422981564a58f56b4e7616313246f4 INFO:root:PassingDataObject: nmdc:d2d46b8a89ed1d2cd56e82e0300d1ebf -INFO:root:PassingDataObject: nmdc:9a8a6ff749049c965aee73a46fe71ee4 -INFO:root:PassingDataObject: nmdc:fabd259c4abbe2fa094b582ed270cfa0 INFO:root:PassingDataObject: nmdc:8280cd33b61adcf4fd7b67cf94127167 +INFO:root:PassingDataObject: nmdc:0564bdc625d05147e42481afcd6fda50 +INFO:root:PassingDataObject: nmdc:ea1cc613a95eabd43826ef689847943c INFO:root:PassingDataObject: nmdc:a1e77760fdd8a6f659829c9c53777989 -INFO:root:PassingDataObject: nmdc:a2422981564a58f56b4e7616313246f4 -INFO:root:PassingDataObject: nmdc:7b1e2da3f6ca453d833038da79307eb5 +INFO:root:PassingDataObject: nmdc:703693765b1d09664b3dd893e5ea54e0 +INFO:root:PassingDataObject: nmdc:ce34bb5413ca57928d16c0e383568532 +INFO:root:PassingDataObject: nmdc:d5f439e869f6affaa7052fafb39e5cd0 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138763 INFO:root:found 1 records INFO:root:record: nmdc:d2646debbfc0164979d65b81bf59d8c9, MAGs Analysis Activity for nmdc:mga0np53 -INFO:root:PassingDataObject: nmdc:c255060f39bae130c7f1254f36ea1c7f INFO:root:PassingDataObject: nmdc:64e1f1b4c506bdd1694c6af380a8e2d8 +INFO:root:PassingDataObject: nmdc:c255060f39bae130c7f1254f36ea1c7f INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138763 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-f0qnth40 INFO:root:legacy_id: gold:Gp0138764 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-f0qnth40 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:259a1435146041ed02aa079a007fb06c INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, Read QC Activity for nmdc:mga0d014 INFO:root:PassingDataObject: nmdc:5f3feb05dca2a847527c507d339a5053 INFO:root:PassingDataObject: nmdc:ac7f371fdf371a8ea7bc4da5a26aa248 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, ReadBased Analysis Activity for nmdc:mga0d014 -INFO:root:PassingDataObject: nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 +INFO:root:PassingDataObject: nmdc:efb94c49864f43e751a74fa5967b2007 +INFO:root:PassingDataObject: nmdc:25bba5aeb0e33c372fead03b587a2098 +INFO:root:PassingDataObject: nmdc:d94983c3f334998b63c881da4063a5b4 INFO:root:PassingDataObject: nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 +INFO:root:PassingDataObject: nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 +INFO:root:PassingDataObject: nmdc:b576e70a64c5094d84a12532c977d57b INFO:root:PassingDataObject: nmdc:d60f7d7173f99100d51e6d3a7a6f7153 -INFO:root:PassingDataObject: nmdc:d94983c3f334998b63c881da4063a5b4 INFO:root:PassingDataObject: nmdc:82d8ed24c5b9abfc452aae9917021ccd -INFO:root:PassingDataObject: nmdc:efb94c49864f43e751a74fa5967b2007 INFO:root:PassingDataObject: nmdc:b60788f3b1d03f3990aac1e179f3b3a0 -INFO:root:PassingDataObject: nmdc:b576e70a64c5094d84a12532c977d57b -INFO:root:PassingDataObject: nmdc:25bba5aeb0e33c372fead03b587a2098 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, Assembly Activity for nmdc:mga0d014 INFO:root:PassingDataObject: nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 -INFO:root:PassingDataObject: nmdc:9b143c3b4d83f74c3a8e485ab854244c INFO:root:PassingDataObject: nmdc:f87ff508c3fdb000f68e7cc4be00fc9a -INFO:root:PassingDataObject: nmdc:e68f1da7de72154b54911586a6642016 +INFO:root:PassingDataObject: nmdc:9b143c3b4d83f74c3a8e485ab854244c INFO:root:PassingDataObject: nmdc:678089696cb48800280025efbaa9d8e9 +INFO:root:PassingDataObject: nmdc:e68f1da7de72154b54911586a6642016 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, Annotation Activity for nmdc:mga0d014 -INFO:root:PassingDataObject: nmdc:9f2d18caf87b87324c7adb0ba948bab6 -INFO:root:PassingDataObject: nmdc:c37245053fc901a44f1aea4a5799291b -INFO:root:PassingDataObject: nmdc:90d637a1e30feb8b7ecc79ac80b5fc12 -INFO:root:PassingDataObject: nmdc:2344d60363b974788b24fe132a2fae7e -INFO:root:PassingDataObject: nmdc:6e8e3b1d796aa23e61fb84a0ff7d7354 -INFO:root:PassingDataObject: nmdc:dc7b0af52c2f4456a0bb5a311b6f3ae6 -INFO:root:PassingDataObject: nmdc:44c4433585c8f8aac0483bfdb8c7d056 +INFO:root:PassingDataObject: nmdc:3fafe39c4478c3ae2b93e735a44b17f2 INFO:root:PassingDataObject: nmdc:efced8d016af8c48ac61c32f7e78915e -INFO:root:PassingDataObject: nmdc:aded04739fb9066616911f2df4159b5f +INFO:root:PassingDataObject: nmdc:5e0fdf2196c68418323094d641191073 +INFO:root:PassingDataObject: nmdc:aa6aa5a2bf410a99e493fe066b83328a INFO:root:PassingDataObject: nmdc:15287e5581186143ea2e7eb9f54fd90c -INFO:root:PassingDataObject: nmdc:790fafe601bc3511c2831799423eacd9 +INFO:root:PassingDataObject: nmdc:aded04739fb9066616911f2df4159b5f +INFO:root:PassingDataObject: nmdc:2344d60363b974788b24fe132a2fae7e +INFO:root:PassingDataObject: nmdc:dc7b0af52c2f4456a0bb5a311b6f3ae6 INFO:root:PassingDataObject: nmdc:e26d53e2a125318b1e273c028dcd8186 -INFO:root:PassingDataObject: nmdc:f377a3c2c5717aa9b7fba9970089d9cf -INFO:root:PassingDataObject: nmdc:e490e8559045b6ed7a3372e1b52fe15b -INFO:root:PassingDataObject: nmdc:518e3047196412db21cf4840eaedb184 -INFO:root:PassingDataObject: nmdc:5e0fdf2196c68418323094d641191073 -INFO:root:PassingDataObject: nmdc:3fafe39c4478c3ae2b93e735a44b17f2 +INFO:root:PassingDataObject: nmdc:6e8e3b1d796aa23e61fb84a0ff7d7354 +INFO:root:PassingDataObject: nmdc:790fafe601bc3511c2831799423eacd9 +INFO:root:PassingDataObject: nmdc:44c4433585c8f8aac0483bfdb8c7d056 INFO:root:PassingDataObject: nmdc:47435e40368b01e9fdf8282a8f51807f -INFO:root:PassingDataObject: nmdc:aa6aa5a2bf410a99e493fe066b83328a +INFO:root:PassingDataObject: nmdc:518e3047196412db21cf4840eaedb184 +INFO:root:PassingDataObject: nmdc:9f2d18caf87b87324c7adb0ba948bab6 +INFO:root:PassingDataObject: nmdc:e490e8559045b6ed7a3372e1b52fe15b +INFO:root:PassingDataObject: nmdc:f377a3c2c5717aa9b7fba9970089d9cf +INFO:root:PassingDataObject: nmdc:90d637a1e30feb8b7ecc79ac80b5fc12 +INFO:root:PassingDataObject: nmdc:c37245053fc901a44f1aea4a5799291b INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0138764 INFO:root:found 1 records INFO:root:record: nmdc:011eeeafbecfe9de0cc39c3d23bc4406, MAGs Analysis Activity for nmdc:mga0d014 -INFO:root:PassingDataObject: nmdc:cfb49cc08a7b4965a76c8a3dc2973fe1 INFO:root:PassingDataObject: nmdc:6b49f3bb005de0781a84fa9e435cd6c7 +INFO:root:PassingDataObject: nmdc:cfb49cc08a7b4965a76c8a3dc2973fe1 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138764 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-36m85r16 INFO:root:legacy_id: gold:Gp0138761 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-36m85r16 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a1852a6601023d802e67f41aef7dfcde INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, Read QC Activity for nmdc:mga0zh78 INFO:root:PassingDataObject: nmdc:9563eed4d85815831dfcf8b8ea651ee4 INFO:root:PassingDataObject: nmdc:37cbca8544d40c5cff4d0fe368c40cc7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, ReadBased Analysis Activity for nmdc:mga0zh78 -INFO:root:PassingDataObject: nmdc:736a8509c72de5b9fa0f913b8a1b87cb -INFO:root:PassingDataObject: nmdc:fdd7dfb77cb680bb57d7bd3570c94854 -INFO:root:PassingDataObject: nmdc:9caf84609b9ec4098a2d3467a1d9111b -INFO:root:PassingDataObject: nmdc:28593bff3c397004b8d010ff71e4f691 INFO:root:PassingDataObject: nmdc:47d13caca51ed3fa89814f24305ea38d +INFO:root:PassingDataObject: nmdc:9caf84609b9ec4098a2d3467a1d9111b INFO:root:PassingDataObject: nmdc:279a423a9e0402eaafd7fb1ea4e30457 -INFO:root:PassingDataObject: nmdc:ce6833391d9bd0639e5476ecee4a14b3 INFO:root:PassingDataObject: nmdc:12247816b11fcb66edec5d823e6936eb +INFO:root:PassingDataObject: nmdc:fdd7dfb77cb680bb57d7bd3570c94854 +INFO:root:PassingDataObject: nmdc:28593bff3c397004b8d010ff71e4f691 +INFO:root:PassingDataObject: nmdc:736a8509c72de5b9fa0f913b8a1b87cb +INFO:root:PassingDataObject: nmdc:ce6833391d9bd0639e5476ecee4a14b3 INFO:root:PassingDataObject: nmdc:a6dcaa2bab4c2fff6ba5b7b869896660 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, Assembly Activity for nmdc:mga0zh78 +INFO:root:PassingDataObject: nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d INFO:root:PassingDataObject: nmdc:cd63d67a3005f9ef6b7a2c18e10ffe7f -INFO:root:PassingDataObject: nmdc:e8c101a054656ec574f23b925894f2dd INFO:root:PassingDataObject: nmdc:a3f36588145928a2fd22d040d6895239 +INFO:root:PassingDataObject: nmdc:e8c101a054656ec574f23b925894f2dd INFO:root:PassingDataObject: nmdc:d125b2c61a4c6e264cc66e62e67b871a -INFO:root:PassingDataObject: nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, Annotation Activity for nmdc:mga0zh78 -INFO:root:PassingDataObject: nmdc:4d6187dee8b1316a986d7bad699ea229 -INFO:root:PassingDataObject: nmdc:3a2cc5081966f7aca921680841a4b454 -INFO:root:PassingDataObject: nmdc:61dc922f1d9cc019a598e52e34ed472b -INFO:root:PassingDataObject: nmdc:df19e119f6bf7bba838283de0da24f33 +INFO:root:PassingDataObject: nmdc:423faa3868ecf8eb4edd51375bdf0d54 INFO:root:PassingDataObject: nmdc:0bf7a6e197864b0f2e393e314265de21 -INFO:root:PassingDataObject: nmdc:d73b4d7e79850e3abe2112426f077833 -INFO:root:PassingDataObject: nmdc:3442f16a3fbb21c1ba26d660f45a21a6 -INFO:root:PassingDataObject: nmdc:45be2650c52a729c7213a9cf77e0c821 INFO:root:PassingDataObject: nmdc:565de56481f14f1b1174865dabc18d3a -INFO:root:PassingDataObject: nmdc:3dc4bc6a0c680f9a3a4d81a85327e75d -INFO:root:PassingDataObject: nmdc:423faa3868ecf8eb4edd51375bdf0d54 -INFO:root:PassingDataObject: nmdc:6d71eaa29caec1fc79f1e58ff7b8b6fc -INFO:root:PassingDataObject: nmdc:82acc4139642314dd1d94338493a8d93 -INFO:root:PassingDataObject: nmdc:f01097d0c891c8ad2773cb2eec1e9666 +INFO:root:PassingDataObject: nmdc:45be2650c52a729c7213a9cf77e0c821 INFO:root:PassingDataObject: nmdc:9cd646b8690ef64cec9895f3336223ea +INFO:root:PassingDataObject: nmdc:b1a03f046e6f555a644cce546fc4d403 +INFO:root:PassingDataObject: nmdc:82acc4139642314dd1d94338493a8d93 INFO:root:PassingDataObject: nmdc:7c8227298ae301a045469bf48187f9f4 -INFO:root:PassingDataObject: nmdc:a639c50f2993046d9ba2b3cdf95dd6e2 +INFO:root:PassingDataObject: nmdc:df19e119f6bf7bba838283de0da24f33 +INFO:root:PassingDataObject: nmdc:6d71eaa29caec1fc79f1e58ff7b8b6fc INFO:root:PassingDataObject: nmdc:8e4245e02e6be363afc34c29383d923d -INFO:root:PassingDataObject: nmdc:b1a03f046e6f555a644cce546fc4d403 -INFO:root:passing_data_objects: 19 -INFO:root:set_name: mags_activity_set for gold:Gp0138761 +INFO:root:PassingDataObject: nmdc:3442f16a3fbb21c1ba26d660f45a21a6 +INFO:root:PassingDataObject: nmdc:f01097d0c891c8ad2773cb2eec1e9666 +INFO:root:PassingDataObject: nmdc:4d6187dee8b1316a986d7bad699ea229 +INFO:root:PassingDataObject: nmdc:d73b4d7e79850e3abe2112426f077833 +INFO:root:PassingDataObject: nmdc:3a2cc5081966f7aca921680841a4b454 +INFO:root:PassingDataObject: nmdc:61dc922f1d9cc019a598e52e34ed472b +INFO:root:PassingDataObject: nmdc:a639c50f2993046d9ba2b3cdf95dd6e2 +INFO:root:PassingDataObject: nmdc:3dc4bc6a0c680f9a3a4d81a85327e75d +INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0138761 INFO:root:found 1 records INFO:root:record: nmdc:125dc105df7b1b5249c2b56db95e530e, MAGs Analysis Activity for nmdc:mga0zh78 INFO:root:PassingDataObject: nmdc:12a3c589d7fae4b7047f423bf90e980c INFO:root:PassingDataObject: nmdc:8e27bde3eb18e3d623cdd07d30880d82 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0138761 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-f1akyc51 INFO:root:legacy_id: gold:Gp0208360 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-f1akyc51 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:94f5b389c2d9f7f5bc92e9fddedfc775 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, Read QC Activity for nmdc:mga08r34 -INFO:root:PassingDataObject: nmdc:8ecaf927c1286b8ded3b9f4bf5a71a01 INFO:root:PassingDataObject: nmdc:74a00e47216badafe992e88abfa3af8c +INFO:root:PassingDataObject: nmdc:8ecaf927c1286b8ded3b9f4bf5a71a01 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, ReadBased Analysis Activity for nmdc:mga08r34 INFO:root:PassingDataObject: nmdc:162476593f47b974abed8ce3045019c3 -INFO:root:PassingDataObject: nmdc:4dd729aa563fb2435cf90d336c704feb -INFO:root:PassingDataObject: nmdc:130829b30e6e2ed9ec9d701aeb3b88c0 -INFO:root:PassingDataObject: nmdc:822af29d1242f2c85ef9d4a8cab092e6 INFO:root:PassingDataObject: nmdc:a2a68597495663a22ef71374ee86e8a8 -INFO:root:PassingDataObject: nmdc:8b34390db85bba4460ea4faa08f97c04 INFO:root:PassingDataObject: nmdc:29166ae0141ed8cd69d0c41167fa08f3 -INFO:root:PassingDataObject: nmdc:0ae3deb16284c899fb978d148f99109d +INFO:root:PassingDataObject: nmdc:4dd729aa563fb2435cf90d336c704feb INFO:root:PassingDataObject: nmdc:3d0387c6fd51db156f588b6e5492456d +INFO:root:PassingDataObject: nmdc:8b34390db85bba4460ea4faa08f97c04 +INFO:root:PassingDataObject: nmdc:0ae3deb16284c899fb978d148f99109d +INFO:root:PassingDataObject: nmdc:130829b30e6e2ed9ec9d701aeb3b88c0 +INFO:root:PassingDataObject: nmdc:822af29d1242f2c85ef9d4a8cab092e6 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, Assembly Activity for nmdc:mga08r34 +INFO:root:PassingDataObject: nmdc:48847c047bb1832a1bb60521492690f9 +INFO:root:PassingDataObject: nmdc:24cc168e055aee129e3a86dab70805f3 INFO:root:PassingDataObject: nmdc:25278dea8043e4e93c34feeb80546796 INFO:root:PassingDataObject: nmdc:a031ef800d3944471d3d6782101ec0cb INFO:root:PassingDataObject: nmdc:14a7236ef319a67e5107ad79a15b531c -INFO:root:PassingDataObject: nmdc:48847c047bb1832a1bb60521492690f9 -INFO:root:PassingDataObject: nmdc:24cc168e055aee129e3a86dab70805f3 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, Annotation Activity for nmdc:mga08r34 -INFO:root:PassingDataObject: nmdc:e929a722ade81c7cc93bb04a829dc417 INFO:root:PassingDataObject: nmdc:ce3b04371573f4747010a3b23a3c96e0 -INFO:root:PassingDataObject: nmdc:4879ca8ce28d92a24dd19d68e728fd83 -INFO:root:PassingDataObject: nmdc:5c1d051cb0d03c2eafaf95a557e941b6 INFO:root:PassingDataObject: nmdc:0ce0a9b2e6e7e88f3de0b403404e569b -INFO:root:PassingDataObject: nmdc:4713f756d85a42866d90391d381438ce -INFO:root:PassingDataObject: nmdc:ffa9b61f73e5d2387759cf42b993e724 -INFO:root:PassingDataObject: nmdc:8171861174fb8eea65cd07e574b14e71 +INFO:root:PassingDataObject: nmdc:1d644e3c3f38881ce75904257a219534 +INFO:root:PassingDataObject: nmdc:9240d0b8b749c29b0376a4af210fd96b +INFO:root:PassingDataObject: nmdc:e929a722ade81c7cc93bb04a829dc417 +INFO:root:PassingDataObject: nmdc:f2ebe683189a9c1d4df8dcc331ea3a2b INFO:root:PassingDataObject: nmdc:73850160619187e2f5b797e32792c1ee -INFO:root:PassingDataObject: nmdc:893e7e3f90cb181fb93c63fb5b6a9dca +INFO:root:PassingDataObject: nmdc:ce969b1adcf927b03324918611885de4 INFO:root:PassingDataObject: nmdc:a5ed1d22eae00a06e7bb363dc236985c +INFO:root:PassingDataObject: nmdc:5c1d051cb0d03c2eafaf95a557e941b6 INFO:root:PassingDataObject: nmdc:e2cbee63ce4344351a063782b6f1aba1 -INFO:root:PassingDataObject: nmdc:ce969b1adcf927b03324918611885de4 -INFO:root:PassingDataObject: nmdc:9240d0b8b749c29b0376a4af210fd96b +INFO:root:PassingDataObject: nmdc:ffa9b61f73e5d2387759cf42b993e724 INFO:root:PassingDataObject: nmdc:b77d4b62746787139fd434dd8f04c3cd -INFO:root:PassingDataObject: nmdc:f2ebe683189a9c1d4df8dcc331ea3a2b -INFO:root:PassingDataObject: nmdc:1d644e3c3f38881ce75904257a219534 -INFO:root:PassingDataObject: nmdc:42e6ad9da595f5c750876af5d0bd3c67 +INFO:root:PassingDataObject: nmdc:4879ca8ce28d92a24dd19d68e728fd83 +INFO:root:PassingDataObject: nmdc:893e7e3f90cb181fb93c63fb5b6a9dca INFO:root:PassingDataObject: nmdc:3a35676071cdcc66d119f7faa4f188cf +INFO:root:PassingDataObject: nmdc:4713f756d85a42866d90391d381438ce +INFO:root:PassingDataObject: nmdc:42e6ad9da595f5c750876af5d0bd3c67 +INFO:root:PassingDataObject: nmdc:8171861174fb8eea65cd07e574b14e71 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208360 INFO:root:found 1 records INFO:root:record: nmdc:f684fefc5232c0cfb195bcc4bee8e650, MAGs Analysis Activity for nmdc:mga08r34 INFO:root:PassingDataObject: nmdc:d2365b55c692c309a9d158850f245d78 INFO:root:PassingDataObject: nmdc:daa2c84c1872846eec7edc5e4c34abd8 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208360 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-5nka4130 INFO:root:legacy_id: gold:Gp0208361 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-5nka4130 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:dac54b23fce5a5c56c11311c77b74294 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208361 INFO:root:found 1 records INFO:root:record: nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396, Read QC Activity for nmdc:mga07w21 -INFO:root:PassingDataObject: nmdc:457cded9b27ef66bb7a306dd61639774 INFO:root:PassingDataObject: nmdc:2d6aaadb2e2d175ab3c39df88cabfa09 +INFO:root:PassingDataObject: nmdc:457cded9b27ef66bb7a306dd61639774 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208361 INFO:root:found 1 records INFO:root:record: nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396, ReadBased Analysis Activity for nmdc:mga07w21 -INFO:root:PassingDataObject: nmdc:09e1ebdb7968df4fb2edad34247a0d96 -INFO:root:PassingDataObject: nmdc:6af06e84011c8e29f130430051c04dbd -INFO:root:PassingDataObject: nmdc:bff2b6142843c3fd962381a3aa2f34cc +INFO:root:PassingDataObject: nmdc:0b94e706067160a6a32ace49bce7c551 INFO:root:PassingDataObject: nmdc:c18dba161515a95f936c89a7a2419d06 +INFO:root:PassingDataObject: nmdc:b90c520abe9316e10946ec6d442f6479 INFO:root:PassingDataObject: nmdc:6642f00c83ce9b397f76195517358af6 +INFO:root:PassingDataObject: nmdc:6af06e84011c8e29f130430051c04dbd +INFO:root:PassingDataObject: nmdc:bff2b6142843c3fd962381a3aa2f34cc INFO:root:PassingDataObject: nmdc:4462a5c000ae58c1629af4d70479fd1c -INFO:root:PassingDataObject: nmdc:0b94e706067160a6a32ace49bce7c551 INFO:root:PassingDataObject: nmdc:5ea276228373b27ff6b0928436e677bd -INFO:root:PassingDataObject: nmdc:b90c520abe9316e10946ec6d442f6479 +INFO:root:PassingDataObject: nmdc:09e1ebdb7968df4fb2edad34247a0d96 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208361 INFO:root:found 1 records INFO:root:record: nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396, Assembly Activity for nmdc:mga07w21 -INFO:root:PassingDataObject: nmdc:c9af680311b49916ce2fa1644b0cb28c -INFO:root:PassingDataObject: nmdc:25c4ceed83baa63f12d5ac4af4fa152b INFO:root:PassingDataObject: nmdc:be4e193b9d5f0f997f8cf5981a471752 -INFO:root:PassingDataObject: nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 INFO:root:PassingDataObject: nmdc:953439df7c2113735ce1d946f63f9db4 +INFO:root:PassingDataObject: nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 +INFO:root:PassingDataObject: nmdc:25c4ceed83baa63f12d5ac4af4fa152b +INFO:root:PassingDataObject: nmdc:c9af680311b49916ce2fa1644b0cb28c INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208361 INFO:root:found 1 records INFO:root:record: nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396, Annotation Activity for nmdc:mga07w21 -INFO:root:PassingDataObject: nmdc:0ceda325248e7b5b165a341b65b5d875 -INFO:root:PassingDataObject: nmdc:62b214ee34889ec9116e90bae0677e55 -INFO:root:PassingDataObject: nmdc:a7c00552b874f63d4bf46c1d369f11e4 -INFO:root:PassingDataObject: nmdc:cd640ef34e91897174d954f67def9d50 -INFO:root:PassingDataObject: nmdc:64cce108c4c20ca95b585cb39f118b74 +INFO:root:PassingDataObject: nmdc:6fe4cb48bc3ba7d818abaa4890437b84 INFO:root:PassingDataObject: nmdc:5a4af06ddce74f5d95de402b328c3d7a -INFO:root:PassingDataObject: nmdc:c337d55d954f3ad31a5faae217072b32 INFO:root:PassingDataObject: nmdc:0be3bd08089cef21a8048c4ed0191721 +INFO:root:PassingDataObject: nmdc:a7c00552b874f63d4bf46c1d369f11e4 +INFO:root:PassingDataObject: nmdc:0ceda325248e7b5b165a341b65b5d875 +INFO:root:PassingDataObject: nmdc:627cd5e02d70446a5faaef0a4caca152 +INFO:root:PassingDataObject: nmdc:64cce108c4c20ca95b585cb39f118b74 INFO:root:PassingDataObject: nmdc:4d99d3339a308fd52141af0e25cd5562 +INFO:root:PassingDataObject: nmdc:cd640ef34e91897174d954f67def9d50 +INFO:root:PassingDataObject: nmdc:2184b50d64aaa3aa723c1970b8c13d64 +INFO:root:PassingDataObject: nmdc:040a2e22ce18fee237af4c0c1e8d1f28 INFO:root:PassingDataObject: nmdc:d27122e06bcf95c35c9a8b75e9175d2f +INFO:root:PassingDataObject: nmdc:c337d55d954f3ad31a5faae217072b32 INFO:root:PassingDataObject: nmdc:c1c680a9c8546c88ce64f56fc90f167d -INFO:root:PassingDataObject: nmdc:627cd5e02d70446a5faaef0a4caca152 -INFO:root:PassingDataObject: nmdc:2184b50d64aaa3aa723c1970b8c13d64 -INFO:root:PassingDataObject: nmdc:725610df714f53ca5915489992d92e1b -INFO:root:PassingDataObject: nmdc:6fe4cb48bc3ba7d818abaa4890437b84 INFO:root:PassingDataObject: nmdc:fc8357f34fef1109d551a453437f3488 -INFO:root:PassingDataObject: nmdc:040a2e22ce18fee237af4c0c1e8d1f28 INFO:root:PassingDataObject: nmdc:51d329171a159c999805695d58b1d2a3 INFO:root:PassingDataObject: nmdc:c281698d7f4aaffd3fc51d3be4923812 +INFO:root:PassingDataObject: nmdc:725610df714f53ca5915489992d92e1b +INFO:root:PassingDataObject: nmdc:62b214ee34889ec9116e90bae0677e55 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208361 INFO:root:found 1 records INFO:root:record: nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396, MAGs Analysis Activity for nmdc:mga07w21 INFO:root:PassingDataObject: nmdc:cca401699184ad81b46dc98f3cfe3ce4 INFO:root:PassingDataObject: nmdc:a98905e5e759aa63926bdf43ecf088ba INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208361 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-62am2h65 INFO:root:legacy_id: gold:Gp0208363 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-62am2h65 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ef11b09bff6940ee45f3c05842b16931 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, Read QC Activity for nmdc:mga0tz31 -INFO:root:PassingDataObject: nmdc:bb2d873aa719f421d03c936238046918 INFO:root:PassingDataObject: nmdc:1a425cd8c99687dfb287017ed35c0d5f +INFO:root:PassingDataObject: nmdc:bb2d873aa719f421d03c936238046918 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, ReadBased Analysis Activity for nmdc:mga0tz31 -INFO:root:PassingDataObject: nmdc:01c99ba64519b8bd3c050b3d16706111 -INFO:root:PassingDataObject: nmdc:f27feac509e24df07ff22bf21e03d49a -INFO:root:PassingDataObject: nmdc:a3244f8601e6d77b419152d05d7e836e INFO:root:PassingDataObject: nmdc:f479aa0eca808c031de0d80b3a10a1a8 +INFO:root:PassingDataObject: nmdc:a3244f8601e6d77b419152d05d7e836e +INFO:root:PassingDataObject: nmdc:f27feac509e24df07ff22bf21e03d49a +INFO:root:PassingDataObject: nmdc:4ae8ca0ec9a1c84205038b854205e587 +INFO:root:PassingDataObject: nmdc:01c99ba64519b8bd3c050b3d16706111 INFO:root:PassingDataObject: nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d -INFO:root:PassingDataObject: nmdc:437020ba232579f82ea03b1c018456ca INFO:root:PassingDataObject: nmdc:82ea4c0739c7289dea24e6074e7fcd1c -INFO:root:PassingDataObject: nmdc:4ae8ca0ec9a1c84205038b854205e587 +INFO:root:PassingDataObject: nmdc:437020ba232579f82ea03b1c018456ca INFO:root:PassingDataObject: nmdc:c67be157191bc733090db7c6e0ca0f89 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, Assembly Activity for nmdc:mga0tz31 INFO:root:PassingDataObject: nmdc:53b133bcf15c8e42144ea221b0f0a887 INFO:root:PassingDataObject: nmdc:f863a250082e61048c2c78d8900ee674 +INFO:root:PassingDataObject: nmdc:84ed09ab11f6b16c4232d963b399047a INFO:root:PassingDataObject: nmdc:77d566d4876f42705d7d97da57b9e26a INFO:root:PassingDataObject: nmdc:eeca0423df4faff401577c56437cb9f1 -INFO:root:PassingDataObject: nmdc:84ed09ab11f6b16c4232d963b399047a INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, Annotation Activity for nmdc:mga0tz31 -INFO:root:PassingDataObject: nmdc:06ff1cdf17484fe75be78a1845b92cce -INFO:root:PassingDataObject: nmdc:60c2dbbc7cdf7c6f7921ec33bc44ab70 -INFO:root:PassingDataObject: nmdc:510150c4e24cd45ad68c4380dc1bae74 -INFO:root:PassingDataObject: nmdc:157ae3ae59df3701a22e322c30d9d822 -INFO:root:PassingDataObject: nmdc:e8a842bedab62a0d28c5b0fdb0ee677c +INFO:root:PassingDataObject: nmdc:c2e5e12c4641e0c2cbebf188ceb39250 INFO:root:PassingDataObject: nmdc:404195f25f1ba59cf88e3d674f5a805e -INFO:root:PassingDataObject: nmdc:837e427c7caea5a0972394fbc4fcad3a -INFO:root:PassingDataObject: nmdc:f8e951ad72ce24d28675e28da04f0257 -INFO:root:PassingDataObject: nmdc:b062d687097a544a0734831f5988a11e -INFO:root:PassingDataObject: nmdc:2a2b17ed73e024b71be9a4a51907ccc0 +INFO:root:PassingDataObject: nmdc:e8a842bedab62a0d28c5b0fdb0ee677c INFO:root:PassingDataObject: nmdc:81241d09ad946db904ea962b229ee404 INFO:root:PassingDataObject: nmdc:61f16354eb0f55115366a9854ab180c3 -INFO:root:PassingDataObject: nmdc:eb741738c6271b23b7631aaee5be06b9 -INFO:root:PassingDataObject: nmdc:5b00c22e4293a65ce4e59277d4973df2 +INFO:root:PassingDataObject: nmdc:36220be5804bdc9b878c06bfe6c47445 +INFO:root:PassingDataObject: nmdc:157ae3ae59df3701a22e322c30d9d822 +INFO:root:PassingDataObject: nmdc:510150c4e24cd45ad68c4380dc1bae74 INFO:root:PassingDataObject: nmdc:0ab1b9a9d03bc36e3a3ff478b4cdb0f1 +INFO:root:PassingDataObject: nmdc:5b00c22e4293a65ce4e59277d4973df2 +INFO:root:PassingDataObject: nmdc:b062d687097a544a0734831f5988a11e INFO:root:PassingDataObject: nmdc:681aff4296793736dee7aa39d9f4408c -INFO:root:PassingDataObject: nmdc:36220be5804bdc9b878c06bfe6c47445 +INFO:root:PassingDataObject: nmdc:60c2dbbc7cdf7c6f7921ec33bc44ab70 +INFO:root:PassingDataObject: nmdc:837e427c7caea5a0972394fbc4fcad3a +INFO:root:PassingDataObject: nmdc:06ff1cdf17484fe75be78a1845b92cce +INFO:root:PassingDataObject: nmdc:eb741738c6271b23b7631aaee5be06b9 +INFO:root:PassingDataObject: nmdc:f8e951ad72ce24d28675e28da04f0257 +INFO:root:PassingDataObject: nmdc:2a2b17ed73e024b71be9a4a51907ccc0 INFO:root:PassingDataObject: nmdc:6823ff84f58b21dd9b1020f638ec0a98 -INFO:root:PassingDataObject: nmdc:c2e5e12c4641e0c2cbebf188ceb39250 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208363 INFO:root:found 1 records INFO:root:record: nmdc:1c43ab825d3f06cb62960dd6e7f2148a, MAGs Analysis Activity for nmdc:mga0tz31 -INFO:root:PassingDataObject: nmdc:7b6370ecbdd0ff86fa49da15c302b054 INFO:root:PassingDataObject: nmdc:4510817d3c2f796372968caed37ccfe9 +INFO:root:PassingDataObject: nmdc:7b6370ecbdd0ff86fa49da15c302b054 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208363 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-8fpzs917 INFO:root:legacy_id: gold:Gp0208362 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-8fpzs917 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:426202d9528d4af01aa6aeeb6ebb5aac INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, Read QC Activity for nmdc:mga0ws51 INFO:root:PassingDataObject: nmdc:db283cbf272ab654da9d4b6a450cc24f INFO:root:PassingDataObject: nmdc:80e5b2e3a281d2fd69ca6b9ac99114be INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, ReadBased Analysis Activity for nmdc:mga0ws51 -INFO:root:PassingDataObject: nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 -INFO:root:PassingDataObject: nmdc:ab2e59e3e053a742e13724228318b735 -INFO:root:PassingDataObject: nmdc:c1cd2425ac0e185206fda36d3ddd2f2a INFO:root:PassingDataObject: nmdc:940fbc40a8aee0384534b966348b39ea -INFO:root:PassingDataObject: nmdc:e40ea1e272be59efcf7007c46382d25e +INFO:root:PassingDataObject: nmdc:ab2e59e3e053a742e13724228318b735 +INFO:root:PassingDataObject: nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 +INFO:root:PassingDataObject: nmdc:b76d37c44c22589af96491cb4ef021d8 INFO:root:PassingDataObject: nmdc:0946444733dadcf9dcbe7b234f53bf6b +INFO:root:PassingDataObject: nmdc:e40ea1e272be59efcf7007c46382d25e INFO:root:PassingDataObject: nmdc:75927a7b9e0d5d95b95adfd04ff185dd -INFO:root:PassingDataObject: nmdc:b76d37c44c22589af96491cb4ef021d8 INFO:root:PassingDataObject: nmdc:1e66471eceb4c3421297919501d04899 +INFO:root:PassingDataObject: nmdc:c1cd2425ac0e185206fda36d3ddd2f2a INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, Assembly Activity for nmdc:mga0ws51 -INFO:root:PassingDataObject: nmdc:3cea51b509fbdb0b47b1351aa7902556 -INFO:root:PassingDataObject: nmdc:f23b9a9213b3710c256607ff37e46b45 INFO:root:PassingDataObject: nmdc:750738895197b7af52d0b664b3d72833 -INFO:root:PassingDataObject: nmdc:155dd13959c24094b25c32226d09a290 INFO:root:PassingDataObject: nmdc:913a139c902a41261c89f8385317684a +INFO:root:PassingDataObject: nmdc:f23b9a9213b3710c256607ff37e46b45 +INFO:root:PassingDataObject: nmdc:3cea51b509fbdb0b47b1351aa7902556 +INFO:root:PassingDataObject: nmdc:155dd13959c24094b25c32226d09a290 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, Annotation Activity for nmdc:mga0ws51 -INFO:root:PassingDataObject: nmdc:a26b72c1013a2a297908b1b57e1b1d19 +INFO:root:PassingDataObject: nmdc:ae1bb26bcad16fceca0ffd107cbfa274 INFO:root:PassingDataObject: nmdc:f69281492ea873c55b34733b5f1f89f8 -INFO:root:PassingDataObject: nmdc:1c0c92e821c7e88043061a6b3cb25f0d -INFO:root:PassingDataObject: nmdc:b87cd6ba4964c4530d9f78fd2d8e98e0 -INFO:root:PassingDataObject: nmdc:4fa1011d7da4a25e59df367242324b25 +INFO:root:PassingDataObject: nmdc:259f344507eff68d41d2e72715e6f86d +INFO:root:PassingDataObject: nmdc:e78a34a7e033caccf3d8202d58511740 +INFO:root:PassingDataObject: nmdc:02bad9c138d32082fa26c925914f343c +INFO:root:PassingDataObject: nmdc:a26b72c1013a2a297908b1b57e1b1d19 INFO:root:PassingDataObject: nmdc:fc882cfc3a2645aafa8c333b70cf5d37 -INFO:root:PassingDataObject: nmdc:d1c036cf7a1832254cea138a44c7b0dd +INFO:root:PassingDataObject: nmdc:1c0c92e821c7e88043061a6b3cb25f0d +INFO:root:PassingDataObject: nmdc:35a4d74618a1491d50b0780682b6e582 INFO:root:PassingDataObject: nmdc:0e736b347bedd9b1d7c75e31f294743d +INFO:root:PassingDataObject: nmdc:d1c036cf7a1832254cea138a44c7b0dd +INFO:root:PassingDataObject: nmdc:b87cd6ba4964c4530d9f78fd2d8e98e0 INFO:root:PassingDataObject: nmdc:2bdcb077ef399bb2cdf018afc810a3d4 +INFO:root:PassingDataObject: nmdc:5741de0f98a09e9cdb181526b0ff9c5a INFO:root:PassingDataObject: nmdc:1d61a33109b96eab0e9618230d801c30 -INFO:root:PassingDataObject: nmdc:35a4d74618a1491d50b0780682b6e582 -INFO:root:PassingDataObject: nmdc:58a473b4aed16a1f409a69e2ef55ec7a -INFO:root:PassingDataObject: nmdc:ae1bb26bcad16fceca0ffd107cbfa274 -INFO:root:PassingDataObject: nmdc:259f344507eff68d41d2e72715e6f86d -INFO:root:PassingDataObject: nmdc:a8511779d0cdd4325e4ca0b031a1d512 +INFO:root:PassingDataObject: nmdc:4fa1011d7da4a25e59df367242324b25 INFO:root:PassingDataObject: nmdc:8562175ff3fe822a660e1553addb5ea2 -INFO:root:PassingDataObject: nmdc:5741de0f98a09e9cdb181526b0ff9c5a -INFO:root:PassingDataObject: nmdc:02bad9c138d32082fa26c925914f343c -INFO:root:PassingDataObject: nmdc:e78a34a7e033caccf3d8202d58511740 +INFO:root:PassingDataObject: nmdc:a8511779d0cdd4325e4ca0b031a1d512 +INFO:root:PassingDataObject: nmdc:58a473b4aed16a1f409a69e2ef55ec7a INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208362 INFO:root:found 1 records INFO:root:record: nmdc:6346585864f97f2e5caf5fc804127755, MAGs Analysis Activity for nmdc:mga0ws51 -INFO:root:PassingDataObject: nmdc:320e6fd3635ed14965122aec954e034c INFO:root:PassingDataObject: nmdc:4f1013324bb4f7931598b00fdc65a5c6 +INFO:root:PassingDataObject: nmdc:320e6fd3635ed14965122aec954e034c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208362 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-gvyfjg32 INFO:root:legacy_id: gold:Gp0208364 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gvyfjg32 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d18ad58ac8a0a7e9748c518081f9059d INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, Read QC Activity for nmdc:mga0zn66 INFO:root:PassingDataObject: nmdc:f04f5763c547ed90ad61ab6cc56bc869 INFO:root:PassingDataObject: nmdc:63a4fdf22394b08d55ff78f56ef0d267 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, ReadBased Analysis Activity for nmdc:mga0zn66 +INFO:root:PassingDataObject: nmdc:d5aa266e817720ff47d7aa850c818715 +INFO:root:PassingDataObject: nmdc:a2014e8a59067392e7354a0f01fafd6d INFO:root:PassingDataObject: nmdc:ac6d3b9fa77d411df771712fa82fdd9a -INFO:root:PassingDataObject: nmdc:51e9e7947025802ac2ef249e475c640f -INFO:root:PassingDataObject: nmdc:391138258e22a253a52fe8beb1e53eca INFO:root:PassingDataObject: nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed -INFO:root:PassingDataObject: nmdc:b1a8f51847736cf459e75e2414a0066d +INFO:root:PassingDataObject: nmdc:51e9e7947025802ac2ef249e475c640f INFO:root:PassingDataObject: nmdc:26af6a9cfbc59c380be916b7dd9ec66c -INFO:root:PassingDataObject: nmdc:a2014e8a59067392e7354a0f01fafd6d -INFO:root:PassingDataObject: nmdc:d5aa266e817720ff47d7aa850c818715 +INFO:root:PassingDataObject: nmdc:b1a8f51847736cf459e75e2414a0066d INFO:root:PassingDataObject: nmdc:4f15ff004d666aec8af98763c326c38a +INFO:root:PassingDataObject: nmdc:391138258e22a253a52fe8beb1e53eca INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, Assembly Activity for nmdc:mga0zn66 -INFO:root:PassingDataObject: nmdc:d3a4775e54eb99509f2d35314cf68705 +INFO:root:PassingDataObject: nmdc:d39cd00c78689bfe7a71d5ab1d85a488 INFO:root:PassingDataObject: nmdc:1ba2fa1136c55203072ea2538980ddd6 -INFO:root:PassingDataObject: nmdc:a21eb2b65627b5942c35010f6ff62ba6 INFO:root:PassingDataObject: nmdc:0e34c2e87918fb623b2a7661cf36bfa7 -INFO:root:PassingDataObject: nmdc:d39cd00c78689bfe7a71d5ab1d85a488 +INFO:root:PassingDataObject: nmdc:a21eb2b65627b5942c35010f6ff62ba6 +INFO:root:PassingDataObject: nmdc:d3a4775e54eb99509f2d35314cf68705 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, Annotation Activity for nmdc:mga0zn66 -INFO:root:PassingDataObject: nmdc:f45e71e984af279a044e8dca39560f56 +INFO:root:PassingDataObject: nmdc:49f7db7161074f62415b895cc740083c +INFO:root:PassingDataObject: nmdc:c4a6941e5ad3c0218b7ffda43024a26f INFO:root:PassingDataObject: nmdc:b18748254f460e87e4b6f953fe1c8f31 -INFO:root:PassingDataObject: nmdc:d1d1f6aded15e865f7ed9d424afb1dbd +INFO:root:PassingDataObject: nmdc:98c30371436387268b2d06adf3f93170 +INFO:root:PassingDataObject: nmdc:7376b9af926e77173241cd007290c054 +INFO:root:PassingDataObject: nmdc:1844499c177476b57dec78d07390d716 INFO:root:PassingDataObject: nmdc:1dd2da17bc18b1736c76ef19c1cdef55 -INFO:root:PassingDataObject: nmdc:c4a6941e5ad3c0218b7ffda43024a26f +INFO:root:PassingDataObject: nmdc:d1d1f6aded15e865f7ed9d424afb1dbd +INFO:root:PassingDataObject: nmdc:5717d58eeb90aa04fd33c008f822cbe5 +INFO:root:PassingDataObject: nmdc:c70672108eb548674fe99ed03b0057ec +INFO:root:PassingDataObject: nmdc:aeea17ad17907e8c0d63beeccaaf2496 +INFO:root:PassingDataObject: nmdc:c9486edaa66ec65affe47b007079bddd +INFO:root:PassingDataObject: nmdc:f45e71e984af279a044e8dca39560f56 +INFO:root:PassingDataObject: nmdc:420aa59100482ab4c4d8531c2c3ae72e INFO:root:PassingDataObject: nmdc:a3d50f597843c1037e696a9ca54de2c0 -INFO:root:PassingDataObject: nmdc:7376b9af926e77173241cd007290c054 INFO:root:PassingDataObject: nmdc:bac45a5564b34cbd32b4cd5d1d66bffc -INFO:root:PassingDataObject: nmdc:420aa59100482ab4c4d8531c2c3ae72e -INFO:root:PassingDataObject: nmdc:aeea17ad17907e8c0d63beeccaaf2496 -INFO:root:PassingDataObject: nmdc:3150e0ea836a76269d5e3870b18527af INFO:root:PassingDataObject: nmdc:cc1463e31531747a29e0ce44d928e4b5 -INFO:root:PassingDataObject: nmdc:c70672108eb548674fe99ed03b0057ec -INFO:root:PassingDataObject: nmdc:c9486edaa66ec65affe47b007079bddd -INFO:root:PassingDataObject: nmdc:5717d58eeb90aa04fd33c008f822cbe5 -INFO:root:PassingDataObject: nmdc:49f7db7161074f62415b895cc740083c -INFO:root:PassingDataObject: nmdc:98c30371436387268b2d06adf3f93170 +INFO:root:PassingDataObject: nmdc:3150e0ea836a76269d5e3870b18527af INFO:root:PassingDataObject: nmdc:fd9fc0c1b60f7d9f8818bd014f565b88 -INFO:root:PassingDataObject: nmdc:1844499c177476b57dec78d07390d716 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208364 INFO:root:found 1 records INFO:root:record: nmdc:7bcab96677bf2080a446277c21fce249, MAGs Analysis Activity for nmdc:mga0zn66 -INFO:root:PassingDataObject: nmdc:4d672c6cc424c86ecc1a65c844908479 INFO:root:PassingDataObject: nmdc:6cd292fcddd3e4d839d5f39ee189bbbd +INFO:root:PassingDataObject: nmdc:4d672c6cc424c86ecc1a65c844908479 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208364 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-abadtt88 INFO:root:legacy_id: gold:Gp0208365 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-abadtt88 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:104c9da6da3a685e5b1b8a3b2652bdd7 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, Read QC Activity for nmdc:mga0qr49 -INFO:root:PassingDataObject: nmdc:93c11e5c022730d2f3ba2b237abe5eac INFO:root:PassingDataObject: nmdc:37a9c8f31c8240c7a72233e33724dc18 +INFO:root:PassingDataObject: nmdc:93c11e5c022730d2f3ba2b237abe5eac INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, ReadBased Analysis Activity for nmdc:mga0qr49 INFO:root:PassingDataObject: nmdc:bd89f6fb8c30f35040400d527117f7c1 -INFO:root:PassingDataObject: nmdc:9c3f084c4224500fb67a6fe44053e0cd -INFO:root:PassingDataObject: nmdc:e76e3bfb17589a0396f0071b6488226a INFO:root:PassingDataObject: nmdc:1584c99826b72d31e550a09dc839ce89 +INFO:root:PassingDataObject: nmdc:66a58407634a85b137a22d9b245db41a +INFO:root:PassingDataObject: nmdc:9c3f084c4224500fb67a6fe44053e0cd INFO:root:PassingDataObject: nmdc:20d68f36daa6167687d12cd0558598ce -INFO:root:PassingDataObject: nmdc:f3816b59147b769cddc7c1d514011294 INFO:root:PassingDataObject: nmdc:4994d80507dc9b4b366debef805d2227 +INFO:root:PassingDataObject: nmdc:f3816b59147b769cddc7c1d514011294 +INFO:root:PassingDataObject: nmdc:e76e3bfb17589a0396f0071b6488226a INFO:root:PassingDataObject: nmdc:986051bcc64e9d19435bc2c56ccdfb98 -INFO:root:PassingDataObject: nmdc:66a58407634a85b137a22d9b245db41a INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, Assembly Activity for nmdc:mga0qr49 -INFO:root:PassingDataObject: nmdc:cad82a7e34092c6206773536c52107f5 INFO:root:PassingDataObject: nmdc:6316e96b726e8d5e4782ea3c654ef37d INFO:root:PassingDataObject: nmdc:3d1f4d18d08b33b08f872807f17d8ec8 -INFO:root:PassingDataObject: nmdc:fdaf545aa50d1180aaee1ea6b325dce3 +INFO:root:PassingDataObject: nmdc:cad82a7e34092c6206773536c52107f5 INFO:root:PassingDataObject: nmdc:a9d4f0be1f4e5b57e5b59592b496e5ee +INFO:root:PassingDataObject: nmdc:fdaf545aa50d1180aaee1ea6b325dce3 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, Annotation Activity for nmdc:mga0qr49 -INFO:root:PassingDataObject: nmdc:dcfa21ca4e243ffaade6ab23480541d7 -INFO:root:PassingDataObject: nmdc:dd47395c6f58c3155772cb9b141c6af2 -INFO:root:PassingDataObject: nmdc:75d91f30a28972f7560febfdfd3dcee7 -INFO:root:PassingDataObject: nmdc:59653809073c8990d37d5519598a077f -INFO:root:PassingDataObject: nmdc:a285653b827d1932dbfaca7052020c69 -INFO:root:PassingDataObject: nmdc:b0666d531e2c9a6950060456cd52415a INFO:root:PassingDataObject: nmdc:080330f7b340c768d19783007028ccc3 +INFO:root:PassingDataObject: nmdc:dd47395c6f58c3155772cb9b141c6af2 +INFO:root:PassingDataObject: nmdc:643e1e16b3b35c80e8a4747be997061c INFO:root:PassingDataObject: nmdc:c63945b1d298e081b19bb385f1a2761c INFO:root:PassingDataObject: nmdc:7966147a95d3a199fb922ee04c965e15 +INFO:root:PassingDataObject: nmdc:dcfa21ca4e243ffaade6ab23480541d7 +INFO:root:PassingDataObject: nmdc:59653809073c8990d37d5519598a077f +INFO:root:PassingDataObject: nmdc:8933fa55df88717ea083acf4d921bca1 INFO:root:PassingDataObject: nmdc:ed0d3a5866bb29a7851c3575299d7db6 +INFO:root:PassingDataObject: nmdc:75d91f30a28972f7560febfdfd3dcee7 +INFO:root:PassingDataObject: nmdc:b647b35aac8f0abd027187b2f9aa73a9 +INFO:root:PassingDataObject: nmdc:a285653b827d1932dbfaca7052020c69 +INFO:root:PassingDataObject: nmdc:85db960d516446b365ba5dd189888eb7 +INFO:root:PassingDataObject: nmdc:c38c17414c5617274b1b1b1dd68fb940 INFO:root:PassingDataObject: nmdc:b50a37d8d60decf5df39d73a847d529c +INFO:root:PassingDataObject: nmdc:061df7d982f8c98954dc7872266ca16e INFO:root:PassingDataObject: nmdc:c46f3757256bc3fe8dd75d20931b66b9 -INFO:root:PassingDataObject: nmdc:c38c17414c5617274b1b1b1dd68fb940 INFO:root:PassingDataObject: nmdc:a7a27af2f5b957456de3adc378d78c7a -INFO:root:PassingDataObject: nmdc:8933fa55df88717ea083acf4d921bca1 -INFO:root:PassingDataObject: nmdc:061df7d982f8c98954dc7872266ca16e -INFO:root:PassingDataObject: nmdc:85db960d516446b365ba5dd189888eb7 -INFO:root:PassingDataObject: nmdc:643e1e16b3b35c80e8a4747be997061c -INFO:root:PassingDataObject: nmdc:b647b35aac8f0abd027187b2f9aa73a9 +INFO:root:PassingDataObject: nmdc:b0666d531e2c9a6950060456cd52415a INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208365 INFO:root:found 1 records INFO:root:record: nmdc:fd67e63fb2596a761f6fa7b37a2f7d29, MAGs Analysis Activity for nmdc:mga0qr49 INFO:root:PassingDataObject: nmdc:93411604712642444f269dbf88e5fa81 INFO:root:PassingDataObject: nmdc:79186f85b0a92fb61c59de519112bc92 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208365 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-kj0jpg50 INFO:root:legacy_id: gold:Gp0208366 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-kj0jpg50 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fee26dc0a11fb4a39c28d7130c2358f6 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208366 INFO:root:found 1 records INFO:root:record: nmdc:d305fa6e01ef8d3dd28a0e79cd30709c, Read QC Activity for nmdc:mga01778 INFO:root:PassingDataObject: nmdc:4e34dc4481221a5373e0b9531904f95c INFO:root:PassingDataObject: nmdc:e29e12880d5ecf0f88aad3bccea0eb44 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208366 INFO:root:found 1 records INFO:root:record: nmdc:d305fa6e01ef8d3dd28a0e79cd30709c, ReadBased Analysis Activity for nmdc:mga01778 -INFO:root:PassingDataObject: nmdc:986a43b1309ea630dcef137d7d41a8de -INFO:root:PassingDataObject: nmdc:4454244aa8d4e5c886cb839780defef2 -INFO:root:PassingDataObject: nmdc:fd24a4640ef629e255fe4af0353e68fd -INFO:root:PassingDataObject: nmdc:455254de6b416946e7433a1fe2c00932 -INFO:root:PassingDataObject: nmdc:754cc6e6046f9ee4ac2324974bdffa1c INFO:root:PassingDataObject: nmdc:a391da88c8bcd5eeeeabbe417ae83572 -INFO:root:PassingDataObject: nmdc:ee2d6a7c74af6e4c124c606400bd8306 +INFO:root:PassingDataObject: nmdc:455254de6b416946e7433a1fe2c00932 INFO:root:PassingDataObject: nmdc:d9147a83cc015cf896a7c1684dcb9bf8 +INFO:root:PassingDataObject: nmdc:ee2d6a7c74af6e4c124c606400bd8306 +INFO:root:PassingDataObject: nmdc:4454244aa8d4e5c886cb839780defef2 +INFO:root:PassingDataObject: nmdc:986a43b1309ea630dcef137d7d41a8de INFO:root:PassingDataObject: nmdc:2f64b6d9493bff8fcf83f3f914df1b61 +INFO:root:PassingDataObject: nmdc:754cc6e6046f9ee4ac2324974bdffa1c +INFO:root:PassingDataObject: nmdc:fd24a4640ef629e255fe4af0353e68fd INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208366 INFO:root:found 1 records INFO:root:record: nmdc:d305fa6e01ef8d3dd28a0e79cd30709c, Assembly Activity for nmdc:mga01778 -INFO:root:PassingDataObject: nmdc:d5c6a425fbebdc920fd61001ea4aab22 -INFO:root:PassingDataObject: nmdc:e344991a805201b76bfa8afc634c8e59 -INFO:root:PassingDataObject: nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 INFO:root:PassingDataObject: nmdc:286c42ec768a906520c8871398acd7c9 +INFO:root:PassingDataObject: nmdc:e344991a805201b76bfa8afc634c8e59 INFO:root:PassingDataObject: nmdc:4040fb85b92c4c72d37b16e70e999715 +INFO:root:PassingDataObject: nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 +INFO:root:PassingDataObject: nmdc:d5c6a425fbebdc920fd61001ea4aab22 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208366 INFO:root:found 1 records INFO:root:record: nmdc:d305fa6e01ef8d3dd28a0e79cd30709c, Annotation Activity for nmdc:mga01778 -INFO:root:PassingDataObject: nmdc:5f2192b681a21dde6066ffc7ad42612a -INFO:root:PassingDataObject: nmdc:8552983127314ac67f0590afae339694 -INFO:root:PassingDataObject: nmdc:89fef1e7e9aa68290c0bd45a3b461b32 -INFO:root:PassingDataObject: nmdc:31becd0dfdecc41a4a25d61686eef3d3 -INFO:root:PassingDataObject: nmdc:25dfe94c34021e019b45bfb6d5344fac INFO:root:PassingDataObject: nmdc:9bd7cf5dc1ccd930c326de6cafca0cc4 +INFO:root:PassingDataObject: nmdc:bdf29a655d7835cedbde70ba9307e83d +INFO:root:PassingDataObject: nmdc:25dfe94c34021e019b45bfb6d5344fac INFO:root:PassingDataObject: nmdc:c898060c7c6f6cf700b6ccbbe740b754 +INFO:root:PassingDataObject: nmdc:3ed4ca98b59c55ceaf4ccbc4be342ad5 INFO:root:PassingDataObject: nmdc:d68e471a7f4937df52ce8ce86f672777 -INFO:root:PassingDataObject: nmdc:30d5b08e2a27a77108ffc1d574f6a92d INFO:root:PassingDataObject: nmdc:a7c7d93a3012b0b0c9890131d15167e7 -INFO:root:PassingDataObject: nmdc:831ccce453dff591ea759ca7b400823d -INFO:root:PassingDataObject: nmdc:bdf29a655d7835cedbde70ba9307e83d -INFO:root:PassingDataObject: nmdc:dfe587cd4dfed121df26b507442218ec -INFO:root:PassingDataObject: nmdc:3ed4ca98b59c55ceaf4ccbc4be342ad5 -INFO:root:PassingDataObject: nmdc:5045788bac3176b1b4935349929234eb INFO:root:PassingDataObject: nmdc:aca4996d6039c77d55b86d25a37a3b59 +INFO:root:PassingDataObject: nmdc:5045788bac3176b1b4935349929234eb +INFO:root:PassingDataObject: nmdc:31becd0dfdecc41a4a25d61686eef3d3 +INFO:root:PassingDataObject: nmdc:30d5b08e2a27a77108ffc1d574f6a92d +INFO:root:PassingDataObject: nmdc:5f2192b681a21dde6066ffc7ad42612a +INFO:root:PassingDataObject: nmdc:4734b2f10b6dd965d1a5393f741afca9 +INFO:root:PassingDataObject: nmdc:dfe587cd4dfed121df26b507442218ec INFO:root:PassingDataObject: nmdc:bfa01dabda89d421cf8c540c9c03d172 +INFO:root:PassingDataObject: nmdc:831ccce453dff591ea759ca7b400823d +INFO:root:PassingDataObject: nmdc:89fef1e7e9aa68290c0bd45a3b461b32 INFO:root:PassingDataObject: nmdc:44087875a41b218b98892832252db32a -INFO:root:PassingDataObject: nmdc:4734b2f10b6dd965d1a5393f741afca9 +INFO:root:PassingDataObject: nmdc:8552983127314ac67f0590afae339694 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208366 INFO:root:found 1 records INFO:root:record: nmdc:d305fa6e01ef8d3dd28a0e79cd30709c, MAGs Analysis Activity for nmdc:mga01778 -INFO:root:PassingDataObject: nmdc:f2ce433a2f4009f966ccd140de6f23b4 INFO:root:PassingDataObject: nmdc:18ba5e0e23060d68a929c2c32ba8638c +INFO:root:PassingDataObject: nmdc:f2ce433a2f4009f966ccd140de6f23b4 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208366 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-2rmac411 INFO:root:legacy_id: gold:Gp0208368 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-2rmac411 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8656757191fe5a86d3a4d524d5f513e2 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, Read QC Activity for nmdc:mga0gs39 INFO:root:PassingDataObject: nmdc:b5cd85e058b666afe786f94296b3bb87 INFO:root:PassingDataObject: nmdc:1a5517ea860e0f63d1bb09fa7a26896c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, ReadBased Analysis Activity for nmdc:mga0gs39 -INFO:root:PassingDataObject: nmdc:e637ad8e302e53d4191c27a26e6b24f3 -INFO:root:PassingDataObject: nmdc:42c66b9d55f81a9ccb6a49209bca21b4 -INFO:root:PassingDataObject: nmdc:01a13a8c760eed71143cfb44f4897c1b -INFO:root:PassingDataObject: nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 INFO:root:PassingDataObject: nmdc:31eecb6142eb5975e9f7302e9716c750 INFO:root:PassingDataObject: nmdc:d153a1e250bf419cf54bbe9c0be1fff6 -INFO:root:PassingDataObject: nmdc:bcffa09dd745360a48fa17257f9859fa INFO:root:PassingDataObject: nmdc:bc2050ad81b78baaf626aeca22d55ccf +INFO:root:PassingDataObject: nmdc:42c66b9d55f81a9ccb6a49209bca21b4 +INFO:root:PassingDataObject: nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 +INFO:root:PassingDataObject: nmdc:e637ad8e302e53d4191c27a26e6b24f3 +INFO:root:PassingDataObject: nmdc:01a13a8c760eed71143cfb44f4897c1b +INFO:root:PassingDataObject: nmdc:bcffa09dd745360a48fa17257f9859fa INFO:root:PassingDataObject: nmdc:1649191c4fa6b979559061a3f7ac3da7 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, Assembly Activity for nmdc:mga0gs39 INFO:root:PassingDataObject: nmdc:d4a4ff4f1d5cfda922057876ea6a0a00 -INFO:root:PassingDataObject: nmdc:1667f3a9d5ad4f2a008aa1a8220834b0 INFO:root:PassingDataObject: nmdc:3bf1a3c10d2c70f0b2e80318d69e31b6 -INFO:root:PassingDataObject: nmdc:979a9e14085b248d091116ebf844d431 INFO:root:PassingDataObject: nmdc:fa10ae73ca177f92ae50c5311ee16e09 +INFO:root:PassingDataObject: nmdc:979a9e14085b248d091116ebf844d431 +INFO:root:PassingDataObject: nmdc:1667f3a9d5ad4f2a008aa1a8220834b0 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, Annotation Activity for nmdc:mga0gs39 INFO:root:PassingDataObject: nmdc:663f67b0d49b8bd89ae51fc905f27106 -INFO:root:PassingDataObject: nmdc:f6816c53714ffa2fed0d2800479d33a2 -INFO:root:PassingDataObject: nmdc:7f3fc33d172e057729da341f61ef4532 -INFO:root:PassingDataObject: nmdc:0d4d65ce0f72e34322203549c8236a26 -INFO:root:PassingDataObject: nmdc:05b1d76a2fb7f32cdfd74b00f98b3afc -INFO:root:PassingDataObject: nmdc:b4a1dc2365e73446008fbad92e2462e3 -INFO:root:PassingDataObject: nmdc:c80b9a6d4e5da0a0baf50e3dd082cd1d -INFO:root:PassingDataObject: nmdc:5287f4952ae3161a3f79f236a2f0440e +INFO:root:PassingDataObject: nmdc:466994ddeeacbe52c5de52006cf16f23 +INFO:root:PassingDataObject: nmdc:9ea7bd0a9922f2ac47cb8026f4674db4 INFO:root:PassingDataObject: nmdc:acace1f7368cd0be3681dd6ae0ff7114 +INFO:root:PassingDataObject: nmdc:703f0a183dce3a1d1b9466ef89ef2416 +INFO:root:PassingDataObject: nmdc:7dd00ef41b0c66d38f7007d733d6abc8 +INFO:root:PassingDataObject: nmdc:0d4d65ce0f72e34322203549c8236a26 INFO:root:PassingDataObject: nmdc:3531b5edbd991fa3245e5aa8b11cfa2e +INFO:root:PassingDataObject: nmdc:ab66bfdeb07ed6cd8a6a830223d2abe2 +INFO:root:PassingDataObject: nmdc:f6816c53714ffa2fed0d2800479d33a2 INFO:root:PassingDataObject: nmdc:cfbaddb379e2057f9861ad8198cc9f88 +INFO:root:PassingDataObject: nmdc:7f3fc33d172e057729da341f61ef4532 +INFO:root:PassingDataObject: nmdc:c80b9a6d4e5da0a0baf50e3dd082cd1d INFO:root:PassingDataObject: nmdc:24f82681ecbf997b36a1c3c0218f43b6 -INFO:root:PassingDataObject: nmdc:487d4720adbcc44880268a6f0ebc7526 -INFO:root:PassingDataObject: nmdc:466994ddeeacbe52c5de52006cf16f23 -INFO:root:PassingDataObject: nmdc:9ea7bd0a9922f2ac47cb8026f4674db4 -INFO:root:PassingDataObject: nmdc:7dd00ef41b0c66d38f7007d733d6abc8 INFO:root:PassingDataObject: nmdc:1fe89bc6ddb96128aae90ecdadf55c53 -INFO:root:PassingDataObject: nmdc:703f0a183dce3a1d1b9466ef89ef2416 -INFO:root:PassingDataObject: nmdc:ab66bfdeb07ed6cd8a6a830223d2abe2 +INFO:root:PassingDataObject: nmdc:487d4720adbcc44880268a6f0ebc7526 +INFO:root:PassingDataObject: nmdc:5287f4952ae3161a3f79f236a2f0440e +INFO:root:PassingDataObject: nmdc:b4a1dc2365e73446008fbad92e2462e3 +INFO:root:PassingDataObject: nmdc:05b1d76a2fb7f32cdfd74b00f98b3afc INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208368 INFO:root:found 1 records INFO:root:record: nmdc:26b621b903f185d49d6b7fb9ac0ca9f7, MAGs Analysis Activity for nmdc:mga0gs39 INFO:root:PassingDataObject: nmdc:988e554ba0b3a33f19689c2270551ec2 INFO:root:PassingDataObject: nmdc:6efaf501f562bdeb64949b17e7e85511 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208368 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-sq1snj73 INFO:root:legacy_id: gold:Gp0208367 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-sq1snj73 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:bef74063c8db88eca336299184d80942 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, Read QC Activity for nmdc:mga0j019 INFO:root:PassingDataObject: nmdc:1efd3ac02cecbbaf108179d26e0c515f INFO:root:PassingDataObject: nmdc:1ead7787ee5ca7dd6dc0196b71ca7b6c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, ReadBased Analysis Activity for nmdc:mga0j019 -INFO:root:PassingDataObject: nmdc:395441e566a48a7f3fd7661e02c39b46 +INFO:root:PassingDataObject: nmdc:ebdd87b9c03afcd3253386926942a3d7 INFO:root:PassingDataObject: nmdc:0abce45e3702eb3f6fcad6cd6de93965 -INFO:root:PassingDataObject: nmdc:570a1044d48814b42fc253d610b8675d +INFO:root:PassingDataObject: nmdc:395441e566a48a7f3fd7661e02c39b46 INFO:root:PassingDataObject: nmdc:0eac886070886288d61760a4ef91b9f3 INFO:root:PassingDataObject: nmdc:ae85c806846b65e5179dfc5c4e593df8 -INFO:root:PassingDataObject: nmdc:806dbb35c8025db29d569c758ddb2115 -INFO:root:PassingDataObject: nmdc:ebdd87b9c03afcd3253386926942a3d7 +INFO:root:PassingDataObject: nmdc:570a1044d48814b42fc253d610b8675d INFO:root:PassingDataObject: nmdc:23dcdd951428db0e7ac83047307c04c2 INFO:root:PassingDataObject: nmdc:1b368068e335e30cecd46034a93680db +INFO:root:PassingDataObject: nmdc:806dbb35c8025db29d569c758ddb2115 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, Assembly Activity for nmdc:mga0j019 -INFO:root:PassingDataObject: nmdc:0ae32293769ba42f0691f7f2de1d26a8 +INFO:root:PassingDataObject: nmdc:0cc57d5c5c54980c60fa4a82d10d2e76 INFO:root:PassingDataObject: nmdc:5ac7cc71adc614863f7ee748a29300b4 +INFO:root:PassingDataObject: nmdc:0ae32293769ba42f0691f7f2de1d26a8 INFO:root:PassingDataObject: nmdc:a7b22ff3e4c2e2c671fba3623685b401 INFO:root:PassingDataObject: nmdc:ae1d558356ea6581b2d74b22ea2e1fff -INFO:root:PassingDataObject: nmdc:0cc57d5c5c54980c60fa4a82d10d2e76 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, Annotation Activity for nmdc:mga0j019 -INFO:root:PassingDataObject: nmdc:187ecb5464dd3fd313f364f2f9a43e37 -INFO:root:PassingDataObject: nmdc:e81ae6b1512b7123de652e8d22933f7d -INFO:root:PassingDataObject: nmdc:c7ef7313b8cec68efc49fa108b74abd0 -INFO:root:PassingDataObject: nmdc:74cbb77c32db87fef495027295f4ba14 +INFO:root:PassingDataObject: nmdc:4705a8260d7ecd3a6bc1c2c7a200a875 INFO:root:PassingDataObject: nmdc:29dd3dd71ca1fb3bd503ab2ad8f18df3 -INFO:root:PassingDataObject: nmdc:9ba8f41f07e372904d5048e0ee303066 -INFO:root:PassingDataObject: nmdc:b00ca730517ff4d992cb138fed15de90 +INFO:root:PassingDataObject: nmdc:2297a381c0d56b25280af1d9e2661a4d +INFO:root:PassingDataObject: nmdc:c7ef7313b8cec68efc49fa108b74abd0 INFO:root:PassingDataObject: nmdc:a8132b0c5dec353ce97ce3266c3ba360 +INFO:root:PassingDataObject: nmdc:d6c7f42834a5bcceb33756eef205d48c +INFO:root:PassingDataObject: nmdc:187ecb5464dd3fd313f364f2f9a43e37 INFO:root:PassingDataObject: nmdc:f492e879a8f2c930b09600a5e8b6fc12 -INFO:root:PassingDataObject: nmdc:2d36ce58d7eebf4b81fb8ac703bd5d06 -INFO:root:PassingDataObject: nmdc:7904f95d105c6fe520c550d0944f7f1d -INFO:root:PassingDataObject: nmdc:4705a8260d7ecd3a6bc1c2c7a200a875 -INFO:root:PassingDataObject: nmdc:2297a381c0d56b25280af1d9e2661a4d +INFO:root:PassingDataObject: nmdc:74cbb77c32db87fef495027295f4ba14 INFO:root:PassingDataObject: nmdc:383cf136cd1005dcce6d59af5786a708 -INFO:root:PassingDataObject: nmdc:ca6422e0593678d8de4331d961633b9a -INFO:root:PassingDataObject: nmdc:0314f93844d8d4205fb877a4de9e2590 +INFO:root:PassingDataObject: nmdc:e81ae6b1512b7123de652e8d22933f7d INFO:root:PassingDataObject: nmdc:cbe6506e40cec024ab157ac0d849fd62 INFO:root:PassingDataObject: nmdc:05e09f98c7937d09d54b1c960be78360 -INFO:root:PassingDataObject: nmdc:d6c7f42834a5bcceb33756eef205d48c +INFO:root:PassingDataObject: nmdc:ca6422e0593678d8de4331d961633b9a +INFO:root:PassingDataObject: nmdc:0314f93844d8d4205fb877a4de9e2590 +INFO:root:PassingDataObject: nmdc:7904f95d105c6fe520c550d0944f7f1d +INFO:root:PassingDataObject: nmdc:2d36ce58d7eebf4b81fb8ac703bd5d06 +INFO:root:PassingDataObject: nmdc:b00ca730517ff4d992cb138fed15de90 +INFO:root:PassingDataObject: nmdc:9ba8f41f07e372904d5048e0ee303066 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208367 INFO:root:found 1 records INFO:root:record: nmdc:c611f0dc7da6977e866733830181b8c2, MAGs Analysis Activity for nmdc:mga0j019 INFO:root:PassingDataObject: nmdc:5f4e64ea148290f572eb40a63b12271c INFO:root:PassingDataObject: nmdc:01d85cacfaf27a02cb88d3b46182e35b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208367 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-vwvc8h03 INFO:root:legacy_id: gold:Gp0208369 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-vwvc8h03 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:65b3ee1c8092cfe1b7fef18cbca970d9 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208369 INFO:root:found 1 records INFO:root:record: nmdc:a2f241b757770afdc17c5f9ec03b1d20, Read QC Activity for nmdc:mga0dj57 -INFO:root:PassingDataObject: nmdc:0096101fe9ef52d6d21a0e053133ca2f INFO:root:PassingDataObject: nmdc:7808998d6af494523d5dbc2d272df8a6 +INFO:root:PassingDataObject: nmdc:0096101fe9ef52d6d21a0e053133ca2f INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208369 INFO:root:found 1 records INFO:root:record: nmdc:a2f241b757770afdc17c5f9ec03b1d20, ReadBased Analysis Activity for nmdc:mga0dj57 -INFO:root:PassingDataObject: nmdc:86979a02b7368694226c22c70adee6fe +INFO:root:PassingDataObject: nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 INFO:root:PassingDataObject: nmdc:86b04c033ff5adda542213f73b767aa7 -INFO:root:PassingDataObject: nmdc:6904bdc7513848f636a48c9e979fadd7 +INFO:root:PassingDataObject: nmdc:cef21d5fe576d361833aa3df98d4b436 INFO:root:PassingDataObject: nmdc:a3e0be12cb5ac87419db27de68ec2954 INFO:root:PassingDataObject: nmdc:49c4b6496f7f81baadb792cc334276c1 +INFO:root:PassingDataObject: nmdc:86979a02b7368694226c22c70adee6fe INFO:root:PassingDataObject: nmdc:06089a2dd871efdb75a5f20c40bd1ad8 +INFO:root:PassingDataObject: nmdc:6904bdc7513848f636a48c9e979fadd7 INFO:root:PassingDataObject: nmdc:c989dce0710ad2c74636dc714bd61cfd -INFO:root:PassingDataObject: nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 -INFO:root:PassingDataObject: nmdc:cef21d5fe576d361833aa3df98d4b436 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208369 INFO:root:found 1 records INFO:root:record: nmdc:a2f241b757770afdc17c5f9ec03b1d20, Assembly Activity for nmdc:mga0dj57 -INFO:root:PassingDataObject: nmdc:186f97d21b303ee5d33e8476c1e8a511 INFO:root:PassingDataObject: nmdc:bff87179b7c0e0c8b1b61c97b0936524 INFO:root:PassingDataObject: nmdc:600b6d34f1148edee4418ab9a2e2b6c8 +INFO:root:PassingDataObject: nmdc:186f97d21b303ee5d33e8476c1e8a511 INFO:root:PassingDataObject: nmdc:cb39be00f9eca4c319d460e7320a910c INFO:root:PassingDataObject: nmdc:245bd47165e85215955550b566497026 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208369 INFO:root:found 1 records INFO:root:record: nmdc:a2f241b757770afdc17c5f9ec03b1d20, Annotation Activity for nmdc:mga0dj57 +INFO:root:PassingDataObject: nmdc:b10fcf59f096610bf3bdd3f85029179f +INFO:root:PassingDataObject: nmdc:39188cb52cc0760b05e05bf17cfb5238 INFO:root:PassingDataObject: nmdc:791ce1f6b5ee631925eef93cd90bb735 -INFO:root:PassingDataObject: nmdc:863fb0ae7e814e4e7995b258cd3882ec -INFO:root:PassingDataObject: nmdc:ea62903cf25b10bd865e913b0f8e7f2e INFO:root:PassingDataObject: nmdc:fa362ced809be4a33c7deb7ddc934722 -INFO:root:PassingDataObject: nmdc:5e7f1778772fd67574461a6e257b3cfc -INFO:root:PassingDataObject: nmdc:b10fcf59f096610bf3bdd3f85029179f +INFO:root:PassingDataObject: nmdc:b1add66d2eb4848e4a755c2f5d8469f6 INFO:root:PassingDataObject: nmdc:e8c77231ae5e4799410c0add40c2639b -INFO:root:PassingDataObject: nmdc:a98e511b5e9fd9588682c0d3d6f34196 +INFO:root:PassingDataObject: nmdc:fda34fdba934ea1532806bf223c45d34 +INFO:root:PassingDataObject: nmdc:6d861228cb9d88658944e6548b483d41 INFO:root:PassingDataObject: nmdc:6057b953f407a307e0dc1f6fb91336bf -INFO:root:PassingDataObject: nmdc:a335f5c95610c998235cc673f60a3572 +INFO:root:PassingDataObject: nmdc:863fb0ae7e814e4e7995b258cd3882ec INFO:root:PassingDataObject: nmdc:6c2438503916e6f3885e326474abace2 -INFO:root:PassingDataObject: nmdc:c836726bca18a3f84d4481f0d53c7add -INFO:root:PassingDataObject: nmdc:a5598af58283a8bfb371daa418031545 -INFO:root:PassingDataObject: nmdc:39188cb52cc0760b05e05bf17cfb5238 +INFO:root:PassingDataObject: nmdc:5e7f1778772fd67574461a6e257b3cfc +INFO:root:PassingDataObject: nmdc:a335f5c95610c998235cc673f60a3572 +INFO:root:PassingDataObject: nmdc:ea62903cf25b10bd865e913b0f8e7f2e INFO:root:PassingDataObject: nmdc:8b10d214e5c59d1c4655edf72020d198 -INFO:root:PassingDataObject: nmdc:6d861228cb9d88658944e6548b483d41 -INFO:root:PassingDataObject: nmdc:b1add66d2eb4848e4a755c2f5d8469f6 INFO:root:PassingDataObject: nmdc:c33c45f986abf4b345e3d24b6cf8fdcf -INFO:root:PassingDataObject: nmdc:fda34fdba934ea1532806bf223c45d34 +INFO:root:PassingDataObject: nmdc:c836726bca18a3f84d4481f0d53c7add +INFO:root:PassingDataObject: nmdc:a5598af58283a8bfb371daa418031545 +INFO:root:PassingDataObject: nmdc:a98e511b5e9fd9588682c0d3d6f34196 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208369 INFO:root:found 1 records INFO:root:record: nmdc:a2f241b757770afdc17c5f9ec03b1d20, MAGs Analysis Activity for nmdc:mga0dj57 INFO:root:PassingDataObject: nmdc:5c41c5558779ab5df1088384302c9be2 INFO:root:PassingDataObject: nmdc:631176d90b345184980a7a9be794ad3a INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208369 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-vn1ar862 INFO:root:legacy_id: gold:Gp0208370 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-vn1ar862 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d38a56c9121372e8eb41f4f8f139481c INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, Read QC Activity for nmdc:mga0er40 INFO:root:PassingDataObject: nmdc:e2192712dc05c20684d9dd64c7fff23d INFO:root:PassingDataObject: nmdc:6a5ae0143648a06f48f6802db863fd4b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, ReadBased Analysis Activity for nmdc:mga0er40 -INFO:root:PassingDataObject: nmdc:a1e866752a2f454f73d8aebae359c4e7 -INFO:root:PassingDataObject: nmdc:03459c5c2cf0e48a33083f182bba3a17 INFO:root:PassingDataObject: nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 +INFO:root:PassingDataObject: nmdc:8c698b534da4300aa2dfc3c1165dbaab INFO:root:PassingDataObject: nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 +INFO:root:PassingDataObject: nmdc:a1e866752a2f454f73d8aebae359c4e7 +INFO:root:PassingDataObject: nmdc:03459c5c2cf0e48a33083f182bba3a17 +INFO:root:PassingDataObject: nmdc:2328978e8c33fda06a5a5895b80c8241 INFO:root:PassingDataObject: nmdc:f1a598e4b9143836d1dc3b3db23cdf94 INFO:root:PassingDataObject: nmdc:7dfa51d15f43c61bee02de8638c6c077 -INFO:root:PassingDataObject: nmdc:8c698b534da4300aa2dfc3c1165dbaab INFO:root:PassingDataObject: nmdc:3fc11e1963abfe9f0ab36d766c9eb1ea -INFO:root:PassingDataObject: nmdc:2328978e8c33fda06a5a5895b80c8241 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, Assembly Activity for nmdc:mga0er40 +INFO:root:PassingDataObject: nmdc:2cdbb7442338ecf9db8716b5035a5215 INFO:root:PassingDataObject: nmdc:671a6e23049e517f506961cfd20861ef -INFO:root:PassingDataObject: nmdc:35cf7defb880a0b170763cb8195ef93f -INFO:root:PassingDataObject: nmdc:7d899a65109456d3c071422ed902f1f2 INFO:root:PassingDataObject: nmdc:958b61e9f607403322034a4665030355 -INFO:root:PassingDataObject: nmdc:2cdbb7442338ecf9db8716b5035a5215 +INFO:root:PassingDataObject: nmdc:7d899a65109456d3c071422ed902f1f2 +INFO:root:PassingDataObject: nmdc:35cf7defb880a0b170763cb8195ef93f INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, Annotation Activity for nmdc:mga0er40 -INFO:root:PassingDataObject: nmdc:83fb4ab09ea6ea316153d28bf4b97e76 -INFO:root:PassingDataObject: nmdc:c0a46859674ea0e7478cfc46fceda5bd -INFO:root:PassingDataObject: nmdc:395e5f88e888a10dd31a5ed59e8e9bb3 INFO:root:PassingDataObject: nmdc:c241751bca7d1249feffb174be9ce535 -INFO:root:PassingDataObject: nmdc:ee674541a52b6be4ac092d9a8d109438 -INFO:root:PassingDataObject: nmdc:5ad996003a6e63d48d91f8f0ddf049fc INFO:root:PassingDataObject: nmdc:592822329b14f3e65f9590f56caf48db +INFO:root:PassingDataObject: nmdc:8b937b6d1ce87ec140e5e6eacbbf9125 +INFO:root:PassingDataObject: nmdc:15ef1a5d9a66f547087fae581a862cf4 INFO:root:PassingDataObject: nmdc:de947f1ffcdf7c47e965054e2474f5b9 -INFO:root:PassingDataObject: nmdc:35f5076bd215bc0492b0f13aa0d31dec -INFO:root:PassingDataObject: nmdc:6b4a66b5661f9c85e94d4197a58a0a2f +INFO:root:PassingDataObject: nmdc:c0a46859674ea0e7478cfc46fceda5bd INFO:root:PassingDataObject: nmdc:8f7a9db83aca16ab3867a25bd62f64ed INFO:root:PassingDataObject: nmdc:691b4b540b36332e0b30987d723b837e -INFO:root:PassingDataObject: nmdc:f9e119e12727e8dbe18fb15ff9cc77dd -INFO:root:PassingDataObject: nmdc:8b937b6d1ce87ec140e5e6eacbbf9125 -INFO:root:PassingDataObject: nmdc:b81cac89bfaceaba629caf0acd6e29af +INFO:root:PassingDataObject: nmdc:83fb4ab09ea6ea316153d28bf4b97e76 +INFO:root:PassingDataObject: nmdc:35f5076bd215bc0492b0f13aa0d31dec +INFO:root:PassingDataObject: nmdc:3545f4a2cd8508bf62991a4cd0dc6904 +INFO:root:PassingDataObject: nmdc:ee674541a52b6be4ac092d9a8d109438 INFO:root:PassingDataObject: nmdc:bfc880cd5119e6670737b4ba976be067 +INFO:root:PassingDataObject: nmdc:6b4a66b5661f9c85e94d4197a58a0a2f +INFO:root:PassingDataObject: nmdc:395e5f88e888a10dd31a5ed59e8e9bb3 +INFO:root:PassingDataObject: nmdc:5ad996003a6e63d48d91f8f0ddf049fc INFO:root:PassingDataObject: nmdc:e54a76dd649658cb3a55fc5bcc9bde1b -INFO:root:PassingDataObject: nmdc:3545f4a2cd8508bf62991a4cd0dc6904 -INFO:root:PassingDataObject: nmdc:15ef1a5d9a66f547087fae581a862cf4 +INFO:root:PassingDataObject: nmdc:f9e119e12727e8dbe18fb15ff9cc77dd +INFO:root:PassingDataObject: nmdc:b81cac89bfaceaba629caf0acd6e29af INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208370 INFO:root:found 1 records INFO:root:record: nmdc:8d878702ffb8a270522c33967c4e2c74, MAGs Analysis Activity for nmdc:mga0er40 -INFO:root:PassingDataObject: nmdc:a6263fd57c332f9374be6c3bfba29dfc INFO:root:PassingDataObject: nmdc:ddc3e8b7eae395ddbc2f859b67c57ac2 +INFO:root:PassingDataObject: nmdc:a6263fd57c332f9374be6c3bfba29dfc INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208370 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-f1fe9370 INFO:root:legacy_id: gold:Gp0208374 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-f1fe9370 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:62915d08fc404130f4abe2c947a4e13e INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, Read QC Activity for nmdc:mga0e015 -INFO:root:PassingDataObject: nmdc:a766b612140efdfd4de74ecde249ed69 INFO:root:PassingDataObject: nmdc:140a0c1c385baaf44b5b1efba9c6a613 +INFO:root:PassingDataObject: nmdc:a766b612140efdfd4de74ecde249ed69 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, ReadBased Analysis Activity for nmdc:mga0e015 -INFO:root:PassingDataObject: nmdc:d0f17a3062772249181b9a0b82b62bc3 -INFO:root:PassingDataObject: nmdc:1d8d68b80c2c2c0caa60cb3b047d1a64 -INFO:root:PassingDataObject: nmdc:fd28416964f6146716707df4d856f339 -INFO:root:PassingDataObject: nmdc:ae90990c3bc65654123208de0e858227 -INFO:root:PassingDataObject: nmdc:63295a9f37f072ec50f1cc068b10a3da INFO:root:PassingDataObject: nmdc:9f5e1b2997788148eca1ab781795ae50 -INFO:root:PassingDataObject: nmdc:964601f9f2f2654739fbbd0fb85f5c7f -INFO:root:PassingDataObject: nmdc:93505187db42e12c4de160c3baed5d0c +INFO:root:PassingDataObject: nmdc:fd28416964f6146716707df4d856f339 INFO:root:PassingDataObject: nmdc:e166b8ead19eb664d59f46d1a6c22059 +INFO:root:PassingDataObject: nmdc:93505187db42e12c4de160c3baed5d0c +INFO:root:PassingDataObject: nmdc:1d8d68b80c2c2c0caa60cb3b047d1a64 +INFO:root:PassingDataObject: nmdc:d0f17a3062772249181b9a0b82b62bc3 +INFO:root:PassingDataObject: nmdc:964601f9f2f2654739fbbd0fb85f5c7f +INFO:root:PassingDataObject: nmdc:63295a9f37f072ec50f1cc068b10a3da +INFO:root:PassingDataObject: nmdc:ae90990c3bc65654123208de0e858227 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, Assembly Activity for nmdc:mga0e015 -INFO:root:PassingDataObject: nmdc:4ce6e048a1abb64af4aa1a281990a0a5 +INFO:root:PassingDataObject: nmdc:acfbf420a25abd4ec18b3c25fdf16c2f INFO:root:PassingDataObject: nmdc:968b8aa8461142766eea787e229d971e -INFO:root:PassingDataObject: nmdc:c792aba535f3665c3a33604827cb4752 +INFO:root:PassingDataObject: nmdc:4ce6e048a1abb64af4aa1a281990a0a5 INFO:root:PassingDataObject: nmdc:a962972ed04d5d2b7e432a78e54b0b2e -INFO:root:PassingDataObject: nmdc:acfbf420a25abd4ec18b3c25fdf16c2f +INFO:root:PassingDataObject: nmdc:c792aba535f3665c3a33604827cb4752 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, Annotation Activity for nmdc:mga0e015 -INFO:root:PassingDataObject: nmdc:9bc97c0999b8f9e89bc174887570c6c0 -INFO:root:PassingDataObject: nmdc:f4dee419361698b9ffd727cb44bc46be -INFO:root:PassingDataObject: nmdc:194fa971b70c1b40ee2de7de2edafc3e -INFO:root:PassingDataObject: nmdc:5e90c07547804280e9df3d849e64b92b -INFO:root:PassingDataObject: nmdc:a94d4d26100209ec34ef9b12eb75fc9f +INFO:root:PassingDataObject: nmdc:4e9e546e9bca74bcb0b989a9d775744d +INFO:root:PassingDataObject: nmdc:12b9c677f03966c4206db13a960ce7e7 +INFO:root:PassingDataObject: nmdc:a923ff8ef375ad0c1cf66ae068c3ddf1 +INFO:root:PassingDataObject: nmdc:a0f25bba10c0ee7b9ad82d2a96201a17 INFO:root:PassingDataObject: nmdc:6f66c530a36e704f18a51cce46a3f067 +INFO:root:PassingDataObject: nmdc:f4dee419361698b9ffd727cb44bc46be INFO:root:PassingDataObject: nmdc:4c814cc35cb3c162e5be52826f0a9576 -INFO:root:PassingDataObject: nmdc:a0f25bba10c0ee7b9ad82d2a96201a17 -INFO:root:PassingDataObject: nmdc:12b9c677f03966c4206db13a960ce7e7 -INFO:root:PassingDataObject: nmdc:a4f6b368f1c40fefe609b074e090241b -INFO:root:PassingDataObject: nmdc:26b47aeef32f6421938b093ff272e0ca +INFO:root:PassingDataObject: nmdc:d5015e3348608e75e1da88e009939f8f INFO:root:PassingDataObject: nmdc:e4e6aa8e6cc82523cc8cb657e69e3781 -INFO:root:PassingDataObject: nmdc:a923ff8ef375ad0c1cf66ae068c3ddf1 -INFO:root:PassingDataObject: nmdc:b2883973758cc61003534b701d0fedd4 INFO:root:PassingDataObject: nmdc:4360a8e380c0aefd129cc944334c426c -INFO:root:PassingDataObject: nmdc:d5015e3348608e75e1da88e009939f8f -INFO:root:PassingDataObject: nmdc:b8595671605eaf249da097f778c2f4b1 -INFO:root:PassingDataObject: nmdc:4e9e546e9bca74bcb0b989a9d775744d +INFO:root:PassingDataObject: nmdc:b2883973758cc61003534b701d0fedd4 +INFO:root:PassingDataObject: nmdc:a4f6b368f1c40fefe609b074e090241b +INFO:root:PassingDataObject: nmdc:194fa971b70c1b40ee2de7de2edafc3e +INFO:root:PassingDataObject: nmdc:a94d4d26100209ec34ef9b12eb75fc9f INFO:root:PassingDataObject: nmdc:b9b0e6937259ced132e6d760e36fccfc +INFO:root:PassingDataObject: nmdc:5e90c07547804280e9df3d849e64b92b +INFO:root:PassingDataObject: nmdc:26b47aeef32f6421938b093ff272e0ca +INFO:root:PassingDataObject: nmdc:b8595671605eaf249da097f778c2f4b1 +INFO:root:PassingDataObject: nmdc:9bc97c0999b8f9e89bc174887570c6c0 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208374 INFO:root:found 1 records INFO:root:record: nmdc:cb6219ddfd401f6364aaac52f89adacd, MAGs Analysis Activity for nmdc:mga0e015 INFO:root:PassingDataObject: nmdc:58dd3348ab2b1e3e8becdeffd1e7d292 INFO:root:PassingDataObject: nmdc:1ab57c6dd9a48629307dcfff1b90c6a3 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208374 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-fvhfvp91 INFO:root:legacy_id: gold:Gp0208371 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-fvhfvp91 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:acee10e153052c8b7bc98c2fe462fdd9 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, Read QC Activity for nmdc:mga02973 -INFO:root:PassingDataObject: nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 INFO:root:PassingDataObject: nmdc:b66b8bd45f2be22655bf6687aace8976 +INFO:root:PassingDataObject: nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, ReadBased Analysis Activity for nmdc:mga02973 -INFO:root:PassingDataObject: nmdc:51c6216d13cc32e0241d8a9ea665aaae INFO:root:PassingDataObject: nmdc:44b662598ea9b8e73f3cc113a1700ac8 INFO:root:PassingDataObject: nmdc:31070d6b6936b8d60f2e50ce54e810e9 +INFO:root:PassingDataObject: nmdc:51c6216d13cc32e0241d8a9ea665aaae +INFO:root:PassingDataObject: nmdc:da65b05b21fcf8d956b23d4d890513b7 +INFO:root:PassingDataObject: nmdc:c68c5efe3a3c690263e9f7b46d20c680 INFO:root:PassingDataObject: nmdc:2dd3e449e4fd7f507ef6f45771e58fea -INFO:root:PassingDataObject: nmdc:2ca4588825f056c60678304f4ece7354 INFO:root:PassingDataObject: nmdc:761eaf4bdfc92c48be812f522d6a2d7c +INFO:root:PassingDataObject: nmdc:2ca4588825f056c60678304f4ece7354 INFO:root:PassingDataObject: nmdc:cedec6a5585e1f6e000aeed9fd24dbfa -INFO:root:PassingDataObject: nmdc:c68c5efe3a3c690263e9f7b46d20c680 -INFO:root:PassingDataObject: nmdc:da65b05b21fcf8d956b23d4d890513b7 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, Assembly Activity for nmdc:mga02973 INFO:root:PassingDataObject: nmdc:b067aacc722dec7f7d5bf6bcb0627dd8 INFO:root:PassingDataObject: nmdc:e762343ae2d052da184e7437fcd8e697 -INFO:root:PassingDataObject: nmdc:447d8460a5baeef3df16d74ace1aed5a -INFO:root:PassingDataObject: nmdc:13569543ba23307e5be94771b7e840bc INFO:root:PassingDataObject: nmdc:47d3dae6f07a5e91fdb438933591353d +INFO:root:PassingDataObject: nmdc:13569543ba23307e5be94771b7e840bc +INFO:root:PassingDataObject: nmdc:447d8460a5baeef3df16d74ace1aed5a INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, Annotation Activity for nmdc:mga02973 +INFO:root:PassingDataObject: nmdc:32d3659ce57ef5809fdb6fc84d02ba39 +INFO:root:PassingDataObject: nmdc:67b3e809cb8767ebf44da1b759c8ae08 +INFO:root:PassingDataObject: nmdc:3a1c7fcc24437141eb17989cdab4d783 +INFO:root:PassingDataObject: nmdc:f5038da44e4431e8c9c23bd94b2f1750 +INFO:root:PassingDataObject: nmdc:7a061ff35b8ca2b5c1c78a00cd788692 +INFO:root:PassingDataObject: nmdc:20cf06a8ccdd228fd8087348a1570d97 INFO:root:PassingDataObject: nmdc:1f7eeb4e0892b83e103a9b88ec8fc918 INFO:root:PassingDataObject: nmdc:56641b6c0f434c87534ff1107a3e0465 -INFO:root:PassingDataObject: nmdc:67b3e809cb8767ebf44da1b759c8ae08 +INFO:root:PassingDataObject: nmdc:0c5e2e57fa9456e88fd5c8f7e0fbd3b3 INFO:root:PassingDataObject: nmdc:45ec22da38c22dfa46bf0274f78b8be4 -INFO:root:PassingDataObject: nmdc:fddbb285c0226dc713b04323a40a8ca6 INFO:root:PassingDataObject: nmdc:91de13e8f6d5d9d537adbb1f5727056a -INFO:root:PassingDataObject: nmdc:3838025565d8270f85ab3feef26fbbb4 -INFO:root:PassingDataObject: nmdc:2791738948a70480aa1a11976b68557e +INFO:root:PassingDataObject: nmdc:b119a88dba20aca7c8b45db552bb302e +INFO:root:PassingDataObject: nmdc:5bba5eb941d060d87a1f5b1347c29a83 INFO:root:PassingDataObject: nmdc:01e3915b5c7fbac4a067e066ad4ada27 +INFO:root:PassingDataObject: nmdc:3838025565d8270f85ab3feef26fbbb4 INFO:root:PassingDataObject: nmdc:25faf1640d02135a5fc44c58d0853749 -INFO:root:PassingDataObject: nmdc:3a1c7fcc24437141eb17989cdab4d783 -INFO:root:PassingDataObject: nmdc:7a061ff35b8ca2b5c1c78a00cd788692 INFO:root:PassingDataObject: nmdc:39d2ba732ba2714016e9b2a1a7aaf7a4 -INFO:root:PassingDataObject: nmdc:5bba5eb941d060d87a1f5b1347c29a83 -INFO:root:PassingDataObject: nmdc:0c5e2e57fa9456e88fd5c8f7e0fbd3b3 -INFO:root:PassingDataObject: nmdc:f5038da44e4431e8c9c23bd94b2f1750 -INFO:root:PassingDataObject: nmdc:20cf06a8ccdd228fd8087348a1570d97 -INFO:root:PassingDataObject: nmdc:b119a88dba20aca7c8b45db552bb302e -INFO:root:PassingDataObject: nmdc:32d3659ce57ef5809fdb6fc84d02ba39 +INFO:root:PassingDataObject: nmdc:fddbb285c0226dc713b04323a40a8ca6 +INFO:root:PassingDataObject: nmdc:2791738948a70480aa1a11976b68557e INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208371 INFO:root:found 1 records INFO:root:record: nmdc:155917eb8aa4c46fc6143d152059f185, MAGs Analysis Activity for nmdc:mga02973 -INFO:root:PassingDataObject: nmdc:140aef394ddc7fe499ec22a7fd4c8255 INFO:root:PassingDataObject: nmdc:6bf42d24ae7728a7857591846238b654 +INFO:root:PassingDataObject: nmdc:140aef394ddc7fe499ec22a7fd4c8255 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208371 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-m990x183 INFO:root:legacy_id: gold:Gp0208375 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-m990x183 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:091325e3152cae4d694e2bbf5b7093db INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, Read QC Activity for nmdc:mga0en49 INFO:root:PassingDataObject: nmdc:8dfc11d03dc15312fff75d2d98091c72 INFO:root:PassingDataObject: nmdc:5bc47b35ff45ea1f95f32a9143bc60a7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, ReadBased Analysis Activity for nmdc:mga0en49 +INFO:root:PassingDataObject: nmdc:b6eae3f25e58068ee532e869d9a054e7 +INFO:root:PassingDataObject: nmdc:39aba2cd0681e634e5a856a1643ad65d +INFO:root:PassingDataObject: nmdc:1c08a38ec232296a9e1375d320b82f70 +INFO:root:PassingDataObject: nmdc:d19a860a2ccadd00fbba8c5f6e9feffc INFO:root:PassingDataObject: nmdc:27a73190e6197cffeecf2de17075aaf5 +INFO:root:PassingDataObject: nmdc:60cd89cae748fbf618f821d0967f8882 INFO:root:PassingDataObject: nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 -INFO:root:PassingDataObject: nmdc:d19a860a2ccadd00fbba8c5f6e9feffc -INFO:root:PassingDataObject: nmdc:39aba2cd0681e634e5a856a1643ad65d INFO:root:PassingDataObject: nmdc:fe497a4e41456277815a2f528d02134d -INFO:root:PassingDataObject: nmdc:b6eae3f25e58068ee532e869d9a054e7 INFO:root:PassingDataObject: nmdc:0bc9789f2ba5b43578924cdee86c8069 -INFO:root:PassingDataObject: nmdc:60cd89cae748fbf618f821d0967f8882 -INFO:root:PassingDataObject: nmdc:1c08a38ec232296a9e1375d320b82f70 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, Assembly Activity for nmdc:mga0en49 -INFO:root:PassingDataObject: nmdc:73fb1fad2ba63e15932b314b73286aa4 -INFO:root:PassingDataObject: nmdc:fe15d11d1cb57b25196f91742fc42007 +INFO:root:PassingDataObject: nmdc:3e126ec5123915148fea43200b0129d1 INFO:root:PassingDataObject: nmdc:66587bdf30209e48bdc5c0555c8d3c91 INFO:root:PassingDataObject: nmdc:2822f8e3c727b92fe32c02907ea483c3 -INFO:root:PassingDataObject: nmdc:3e126ec5123915148fea43200b0129d1 +INFO:root:PassingDataObject: nmdc:73fb1fad2ba63e15932b314b73286aa4 +INFO:root:PassingDataObject: nmdc:fe15d11d1cb57b25196f91742fc42007 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, Annotation Activity for nmdc:mga0en49 +INFO:root:PassingDataObject: nmdc:beceffa1bc5901577cf7758864e2c018 +INFO:root:PassingDataObject: nmdc:4640240f7f8f6af6851c6496129953ad INFO:root:PassingDataObject: nmdc:b33ee64163da3a3261e49d128a4e37fe -INFO:root:PassingDataObject: nmdc:2d9c0848b1516c547b578eb80a2dd217 -INFO:root:PassingDataObject: nmdc:636bdddd17321c43638fdd1946a9e8e8 +INFO:root:PassingDataObject: nmdc:7c61ae0f9e32ff1a38af3361b4749e83 +INFO:root:PassingDataObject: nmdc:86ffb86493aff9d733388225309985f7 INFO:root:PassingDataObject: nmdc:0f639c755a0cdb47319eff64815f5909 +INFO:root:PassingDataObject: nmdc:949286bb6d897934486b494ef4db4f24 INFO:root:PassingDataObject: nmdc:83d0800e9ed6d005f65df585e53c33a3 -INFO:root:PassingDataObject: nmdc:beceffa1bc5901577cf7758864e2c018 -INFO:root:PassingDataObject: nmdc:7c61ae0f9e32ff1a38af3361b4749e83 -INFO:root:PassingDataObject: nmdc:85d8cbdffc18147e221cca65d92b0400 -INFO:root:PassingDataObject: nmdc:4640240f7f8f6af6851c6496129953ad INFO:root:PassingDataObject: nmdc:b5cfd9b8e8be3f12f4fe8a21a8e7d2d2 +INFO:root:PassingDataObject: nmdc:636bdddd17321c43638fdd1946a9e8e8 INFO:root:PassingDataObject: nmdc:ccc986c72525f100ecbf090654c8c196 -INFO:root:PassingDataObject: nmdc:7416f3c5786f60b9552d769dc18f5ecb -INFO:root:PassingDataObject: nmdc:b168ce36d4126b0ec9d472b425bc3ef9 -INFO:root:PassingDataObject: nmdc:a14f04811a9f8f6587bb0151db3942c2 -INFO:root:PassingDataObject: nmdc:64acf8adc1fa39c1e585fe6e7a3cf714 -INFO:root:PassingDataObject: nmdc:86ffb86493aff9d733388225309985f7 INFO:root:PassingDataObject: nmdc:10ffb42b64642e5bac6e4cc5c8e87c77 -INFO:root:PassingDataObject: nmdc:949286bb6d897934486b494ef4db4f24 +INFO:root:PassingDataObject: nmdc:64acf8adc1fa39c1e585fe6e7a3cf714 +INFO:root:PassingDataObject: nmdc:a14f04811a9f8f6587bb0151db3942c2 +INFO:root:PassingDataObject: nmdc:7416f3c5786f60b9552d769dc18f5ecb INFO:root:PassingDataObject: nmdc:0bf169e66bef4fc33db9044dc1712de2 +INFO:root:PassingDataObject: nmdc:85d8cbdffc18147e221cca65d92b0400 +INFO:root:PassingDataObject: nmdc:b168ce36d4126b0ec9d472b425bc3ef9 +INFO:root:PassingDataObject: nmdc:2d9c0848b1516c547b578eb80a2dd217 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208375 INFO:root:found 1 records INFO:root:record: nmdc:ca32713f459d8c4c22ecd9fc192476c5, MAGs Analysis Activity for nmdc:mga0en49 INFO:root:PassingDataObject: nmdc:7900edbf5c0da7ac80ac719eb5256f49 INFO:root:PassingDataObject: nmdc:ef52cb74df606f6c6ea546e5eb9a2407 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208375 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-dh7zcy95 INFO:root:legacy_id: gold:Gp0208372 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-dh7zcy95 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:00a2071567e1e8e58bef5263fbdf7905 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208372 INFO:root:found 1 records INFO:root:record: nmdc:027d1088414a1e587cc9519f471ac7e5, Read QC Activity for nmdc:mga0tp58 -INFO:root:PassingDataObject: nmdc:5e0f21bfc209282f65927d4184775f35 INFO:root:PassingDataObject: nmdc:45cc170af2c7cfacee3f72776f129239 +INFO:root:PassingDataObject: nmdc:5e0f21bfc209282f65927d4184775f35 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208372 INFO:root:found 1 records INFO:root:record: nmdc:027d1088414a1e587cc9519f471ac7e5, ReadBased Analysis Activity for nmdc:mga0tp58 +INFO:root:PassingDataObject: nmdc:0d4aec24449645364b0bdb57d7de722f INFO:root:PassingDataObject: nmdc:97f568b222020dacabc6c313c893225e -INFO:root:PassingDataObject: nmdc:380f82c8f45c6944c6bf7db3cfe57cc8 -INFO:root:PassingDataObject: nmdc:85a5ffb12f7438775590755a36bc23ef -INFO:root:PassingDataObject: nmdc:b5a236324d2ce1127f901c9759af3f84 -INFO:root:PassingDataObject: nmdc:8907cd3d12fc07d5ae19eccf6dc117fa INFO:root:PassingDataObject: nmdc:c5acddf8bf9749557d7883f0dd8b269d -INFO:root:PassingDataObject: nmdc:dd073d847659d5157e3cb65ed98c0cd5 -INFO:root:PassingDataObject: nmdc:0d4aec24449645364b0bdb57d7de722f +INFO:root:PassingDataObject: nmdc:8907cd3d12fc07d5ae19eccf6dc117fa +INFO:root:PassingDataObject: nmdc:b5a236324d2ce1127f901c9759af3f84 INFO:root:PassingDataObject: nmdc:61cef9a17ea4c982cfe3b3e4ac7415d6 +INFO:root:PassingDataObject: nmdc:dd073d847659d5157e3cb65ed98c0cd5 +INFO:root:PassingDataObject: nmdc:380f82c8f45c6944c6bf7db3cfe57cc8 +INFO:root:PassingDataObject: nmdc:85a5ffb12f7438775590755a36bc23ef INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208372 INFO:root:found 1 records INFO:root:record: nmdc:027d1088414a1e587cc9519f471ac7e5, Assembly Activity for nmdc:mga0tp58 -INFO:root:PassingDataObject: nmdc:13c5321b515278681bf7813472ac1fd9 -INFO:root:PassingDataObject: nmdc:4daba0991ac1ce4862bb25228a74d8ca INFO:root:PassingDataObject: nmdc:0f6065de3d4d80ef2c2d6e6bd26591fd -INFO:root:PassingDataObject: nmdc:896e7cf242e38d56af717f0cc31b4350 INFO:root:PassingDataObject: nmdc:96cb29c54fd6ec82513ce930cb9773d2 +INFO:root:PassingDataObject: nmdc:896e7cf242e38d56af717f0cc31b4350 +INFO:root:PassingDataObject: nmdc:13c5321b515278681bf7813472ac1fd9 +INFO:root:PassingDataObject: nmdc:4daba0991ac1ce4862bb25228a74d8ca INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208372 INFO:root:found 1 records INFO:root:record: nmdc:027d1088414a1e587cc9519f471ac7e5, Annotation Activity for nmdc:mga0tp58 -INFO:root:PassingDataObject: nmdc:98f3e11ca1c0df5120daf682b916d8ec +INFO:root:PassingDataObject: nmdc:4a2a31d07d2b8cb974477055d11c50b1 INFO:root:PassingDataObject: nmdc:8a5d516bc04d6a0c581d7e86ab6a5df6 -INFO:root:PassingDataObject: nmdc:e7b6f1cd5a0a5e373667f1b39a1b7007 -INFO:root:PassingDataObject: nmdc:d1956f7f147402342524a1d16ce0ee76 -INFO:root:PassingDataObject: nmdc:5d08aa3bcaa83f5bee7c11668d40dac7 -INFO:root:PassingDataObject: nmdc:c3a976a05ac20a4e5abd58f42e14f3ed -INFO:root:PassingDataObject: nmdc:71d7b55970308d41e2bdd41a4df7d60d INFO:root:PassingDataObject: nmdc:7873d0ba5149b267fd16c20e72519465 -INFO:root:PassingDataObject: nmdc:4a2a31d07d2b8cb974477055d11c50b1 +INFO:root:PassingDataObject: nmdc:81c7f5e42ab2c2730b7f5a0f27660f29 +INFO:root:PassingDataObject: nmdc:5d08aa3bcaa83f5bee7c11668d40dac7 +INFO:root:PassingDataObject: nmdc:28ee4c766957753b0cadee6515da13a9 INFO:root:PassingDataObject: nmdc:fb0f3c5ae9a8b10358f635ffa96d6b42 -INFO:root:PassingDataObject: nmdc:0591d299f220bb7bdcfbfc74c0d0981e +INFO:root:PassingDataObject: nmdc:397f856f8dbcfdeb4115077ffbe17a9b +INFO:root:PassingDataObject: nmdc:98f3e11ca1c0df5120daf682b916d8ec +INFO:root:PassingDataObject: nmdc:33a077160b9849b25cf8db711f612337 +INFO:root:PassingDataObject: nmdc:71d7b55970308d41e2bdd41a4df7d60d +INFO:root:PassingDataObject: nmdc:34b22dfe836c514d60dc9139f8e842b6 INFO:root:PassingDataObject: nmdc:b2c0c2011c152314fda141899076011f +INFO:root:PassingDataObject: nmdc:0591d299f220bb7bdcfbfc74c0d0981e INFO:root:PassingDataObject: nmdc:2ba9795443542f621d33895b0d18ae05 -INFO:root:PassingDataObject: nmdc:33a077160b9849b25cf8db711f612337 -INFO:root:PassingDataObject: nmdc:397f856f8dbcfdeb4115077ffbe17a9b +INFO:root:PassingDataObject: nmdc:d1956f7f147402342524a1d16ce0ee76 +INFO:root:PassingDataObject: nmdc:e7b6f1cd5a0a5e373667f1b39a1b7007 +INFO:root:PassingDataObject: nmdc:c3a976a05ac20a4e5abd58f42e14f3ed INFO:root:PassingDataObject: nmdc:ff2d3c83516531bc8075c2dd9f618faa -INFO:root:PassingDataObject: nmdc:28ee4c766957753b0cadee6515da13a9 -INFO:root:PassingDataObject: nmdc:34b22dfe836c514d60dc9139f8e842b6 -INFO:root:PassingDataObject: nmdc:81c7f5e42ab2c2730b7f5a0f27660f29 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208372 INFO:root:found 1 records INFO:root:record: nmdc:027d1088414a1e587cc9519f471ac7e5, MAGs Analysis Activity for nmdc:mga0tp58 INFO:root:PassingDataObject: nmdc:08e082d753ef4e28e9c34973805ed2ca INFO:root:PassingDataObject: nmdc:3f9c579781c03f08a4b742f2a8cf4ea4 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208372 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-v7vx4v18 INFO:root:legacy_id: gold:Gp0208376 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-v7vx4v18 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fe61b5e7c3aff7b27e5be1f97f55efda INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, Read QC Activity for nmdc:mga0jp50 INFO:root:PassingDataObject: nmdc:16735277dc68cdfdf4a0286b680f0584 INFO:root:PassingDataObject: nmdc:576fc5e7df52ca50320b49075f2b4ef4 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, ReadBased Analysis Activity for nmdc:mga0jp50 -INFO:root:PassingDataObject: nmdc:16be67531d9be2bf5dff60892a736e6d -INFO:root:PassingDataObject: nmdc:10d83e69db2f76a5b21c010d627401f2 -INFO:root:PassingDataObject: nmdc:6fd2822d1a3642667ad4df25ce2b6554 -INFO:root:PassingDataObject: nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 -INFO:root:PassingDataObject: nmdc:1efcea7031226523445910e22be4c2a8 INFO:root:PassingDataObject: nmdc:4e43961184c283ad2c396054f79648b7 -INFO:root:PassingDataObject: nmdc:6914d1f0b178d2b8b96a63066b368db2 -INFO:root:PassingDataObject: nmdc:4967d9a0b3c1c769273f32bb536cef1a +INFO:root:PassingDataObject: nmdc:1efcea7031226523445910e22be4c2a8 INFO:root:PassingDataObject: nmdc:8b8e79d2cf1780851ac71bd0ec51778f +INFO:root:PassingDataObject: nmdc:4967d9a0b3c1c769273f32bb536cef1a +INFO:root:PassingDataObject: nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 +INFO:root:PassingDataObject: nmdc:6914d1f0b178d2b8b96a63066b368db2 +INFO:root:PassingDataObject: nmdc:10d83e69db2f76a5b21c010d627401f2 +INFO:root:PassingDataObject: nmdc:6fd2822d1a3642667ad4df25ce2b6554 +INFO:root:PassingDataObject: nmdc:16be67531d9be2bf5dff60892a736e6d INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, Assembly Activity for nmdc:mga0jp50 -INFO:root:PassingDataObject: nmdc:8558a765a73d18aaa92d6cda63b1009f INFO:root:PassingDataObject: nmdc:f124bfc6fad15138f2ac7f37ad716773 INFO:root:PassingDataObject: nmdc:50c99b3e08df9fc9d07649afdc61364b -INFO:root:PassingDataObject: nmdc:a1f516729d4b43717221b9a070779b0c INFO:root:PassingDataObject: nmdc:68e888dba633139fb85132685e5db148 +INFO:root:PassingDataObject: nmdc:a1f516729d4b43717221b9a070779b0c +INFO:root:PassingDataObject: nmdc:8558a765a73d18aaa92d6cda63b1009f INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, Annotation Activity for nmdc:mga0jp50 -INFO:root:PassingDataObject: nmdc:344ce0d3913a2b80fb6f7f9d766a7633 INFO:root:PassingDataObject: nmdc:5970c198eb3446ae20fbd3d206addb1a -INFO:root:PassingDataObject: nmdc:e12515161bcd22aed5cb65f19e98a12e -INFO:root:PassingDataObject: nmdc:fe1aeeafc20b64b8e339727ddd738f61 -INFO:root:PassingDataObject: nmdc:5f8f7af4278288db0949333ca2463039 -INFO:root:PassingDataObject: nmdc:f47440f3184d82f921b99f9e4bbe15a5 INFO:root:PassingDataObject: nmdc:f70ad0e13393ebb3efcd38c3567c10f2 -INFO:root:PassingDataObject: nmdc:bbd9f024b74bc502f5d0eef5a7dea41d -INFO:root:PassingDataObject: nmdc:6ce53e77b0fdc6a095d9a131df253878 INFO:root:PassingDataObject: nmdc:cb32c985ce30060d7bc7befdc3f6626e +INFO:root:PassingDataObject: nmdc:f5b420f9aab056ad35395f3729eaaf8d +INFO:root:PassingDataObject: nmdc:cca9357e25fb2008f673fa3aae26f644 INFO:root:PassingDataObject: nmdc:d685f7d35320b6cacc54e66beefd32fe -INFO:root:PassingDataObject: nmdc:36c0e1f80cb60aef125ff4dcb18a4a8a +INFO:root:PassingDataObject: nmdc:bbd9f024b74bc502f5d0eef5a7dea41d INFO:root:PassingDataObject: nmdc:95ea5180130859ebf2e7d54922028b20 INFO:root:PassingDataObject: nmdc:5e4cd89ba25ed960f63fcb84f87277ad -INFO:root:PassingDataObject: nmdc:f5b420f9aab056ad35395f3729eaaf8d INFO:root:PassingDataObject: nmdc:b34ff55fbe68d030ab7b351923e4e0a0 -INFO:root:PassingDataObject: nmdc:cca9357e25fb2008f673fa3aae26f644 +INFO:root:PassingDataObject: nmdc:fe1aeeafc20b64b8e339727ddd738f61 +INFO:root:PassingDataObject: nmdc:f47440f3184d82f921b99f9e4bbe15a5 INFO:root:PassingDataObject: nmdc:41b40b03066c2f60745176128db2c50c +INFO:root:PassingDataObject: nmdc:36c0e1f80cb60aef125ff4dcb18a4a8a INFO:root:PassingDataObject: nmdc:623ebdfcc8fc92e665684a94fdb035dc +INFO:root:PassingDataObject: nmdc:6ce53e77b0fdc6a095d9a131df253878 +INFO:root:PassingDataObject: nmdc:e12515161bcd22aed5cb65f19e98a12e +INFO:root:PassingDataObject: nmdc:5f8f7af4278288db0949333ca2463039 +INFO:root:PassingDataObject: nmdc:344ce0d3913a2b80fb6f7f9d766a7633 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208376 INFO:root:found 1 records INFO:root:record: nmdc:0e83f4ae80eedea894d24e26caf253b2, MAGs Analysis Activity for nmdc:mga0jp50 -INFO:root:PassingDataObject: nmdc:e72003ca5fa8dc9dc3166b7d31816fb6 INFO:root:PassingDataObject: nmdc:74e5f9a6b52323c1f7d3f5b922d4ee53 +INFO:root:PassingDataObject: nmdc:e72003ca5fa8dc9dc3166b7d31816fb6 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208376 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-m6q4nw59 INFO:root:legacy_id: gold:Gp0208373 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-m6q4nw59 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:3896cc46b145ba465c67a164e7446400 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, Read QC Activity for nmdc:mga0ry32 INFO:root:PassingDataObject: nmdc:b7dc1bff51751b071366b1d582cc6c00 INFO:root:PassingDataObject: nmdc:7a38fec7d52c8fbb2a094bf8ca9db24e INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, ReadBased Analysis Activity for nmdc:mga0ry32 +INFO:root:PassingDataObject: nmdc:9b1e862ed0340a16d8a3baed056f2934 INFO:root:PassingDataObject: nmdc:4aa13bef1460c6e06f6bcb09b184894c INFO:root:PassingDataObject: nmdc:389a79d0558c6dcff23934998dd96b07 -INFO:root:PassingDataObject: nmdc:895bff8e573da1a654e7b2b48a9aa6d0 INFO:root:PassingDataObject: nmdc:806b36d02366596de52d702a8bc60f5b INFO:root:PassingDataObject: nmdc:12f872dde3c3b6dee75bf41e88515852 INFO:root:PassingDataObject: nmdc:ca4a2523df1827f60864aa9441e09fba INFO:root:PassingDataObject: nmdc:84f9f57372a2980b08cb12fd17800b28 -INFO:root:PassingDataObject: nmdc:9b1e862ed0340a16d8a3baed056f2934 INFO:root:PassingDataObject: nmdc:9a8696952be8a44279ee1fbd0b0e2834 +INFO:root:PassingDataObject: nmdc:895bff8e573da1a654e7b2b48a9aa6d0 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, Assembly Activity for nmdc:mga0ry32 INFO:root:PassingDataObject: nmdc:94be8bdc393ccff73573e126cf3c1718 +INFO:root:PassingDataObject: nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 INFO:root:PassingDataObject: nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 -INFO:root:PassingDataObject: nmdc:949f2181d65b8922aa60e6d59ac02711 INFO:root:PassingDataObject: nmdc:8c906280a84b91d4ac4fcc9afdc82540 -INFO:root:PassingDataObject: nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 +INFO:root:PassingDataObject: nmdc:949f2181d65b8922aa60e6d59ac02711 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, Annotation Activity for nmdc:mga0ry32 -INFO:root:PassingDataObject: nmdc:5b1578d2c7704197583312e13ca71891 +INFO:root:PassingDataObject: nmdc:9d27c4e0111917a8b9c0d7ebd6285f54 +INFO:root:PassingDataObject: nmdc:1d54329d556d21ec58250ecf36b4af56 +INFO:root:PassingDataObject: nmdc:cf53fc6df9b8f4daab45ce4b422d962f +INFO:root:PassingDataObject: nmdc:4da23a432550f971ee117685cf52f42e +INFO:root:PassingDataObject: nmdc:c01dac5637ac9d32ee5e8135a3bf72d0 +INFO:root:PassingDataObject: nmdc:34e5d4676d88136f22f9945ee0983565 INFO:root:PassingDataObject: nmdc:4a4804e1bbb3ac585de1d3f785f3fddc +INFO:root:PassingDataObject: nmdc:ad867c6f855d944dc967760ee59a9c9c +INFO:root:PassingDataObject: nmdc:08884b9dcfd86b946058230f6c2ac2db +INFO:root:PassingDataObject: nmdc:5b1578d2c7704197583312e13ca71891 +INFO:root:PassingDataObject: nmdc:255f62d9101f549da3403b175c917c5f INFO:root:PassingDataObject: nmdc:2fb15c746d4e2a5858e168c323d539b5 INFO:root:PassingDataObject: nmdc:3bc2ca72c3471843101706ab1969a040 -INFO:root:PassingDataObject: nmdc:4da23a432550f971ee117685cf52f42e -INFO:root:PassingDataObject: nmdc:cf53fc6df9b8f4daab45ce4b422d962f -INFO:root:PassingDataObject: nmdc:76a512894ece0f80c448865781e92807 -INFO:root:PassingDataObject: nmdc:34e5d4676d88136f22f9945ee0983565 INFO:root:PassingDataObject: nmdc:360b6234544c6a41aee3da96cc4b5d00 -INFO:root:PassingDataObject: nmdc:4a558dc3362b2f52b0e9cc713e2b6586 INFO:root:PassingDataObject: nmdc:76cc722c2c35fb64a56ddac8db6af11e -INFO:root:PassingDataObject: nmdc:c01dac5637ac9d32ee5e8135a3bf72d0 -INFO:root:PassingDataObject: nmdc:baba48f801551827428e561e4a33dd1d -INFO:root:PassingDataObject: nmdc:1d54329d556d21ec58250ecf36b4af56 -INFO:root:PassingDataObject: nmdc:9d27c4e0111917a8b9c0d7ebd6285f54 +INFO:root:PassingDataObject: nmdc:76a512894ece0f80c448865781e92807 INFO:root:PassingDataObject: nmdc:84450b0800a4c64890f0668eb59f4ef7 -INFO:root:PassingDataObject: nmdc:255f62d9101f549da3403b175c917c5f -INFO:root:PassingDataObject: nmdc:08884b9dcfd86b946058230f6c2ac2db -INFO:root:PassingDataObject: nmdc:ad867c6f855d944dc967760ee59a9c9c +INFO:root:PassingDataObject: nmdc:baba48f801551827428e561e4a33dd1d +INFO:root:PassingDataObject: nmdc:4a558dc3362b2f52b0e9cc713e2b6586 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208373 INFO:root:found 1 records INFO:root:record: nmdc:b93367031cf986a1f436f250eb0e6cf4, MAGs Analysis Activity for nmdc:mga0ry32 -INFO:root:PassingDataObject: nmdc:7cb3be5ed6f4339e48a71c343bd1ffd2 INFO:root:PassingDataObject: nmdc:b84eb665c963a36640b3ff9972b18a0d +INFO:root:PassingDataObject: nmdc:7cb3be5ed6f4339e48a71c343bd1ffd2 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208373 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-jn4z8y81 INFO:root:legacy_id: gold:Gp0208377 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-jn4z8y81 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:e444ada18237f6db32de92516773b0d5 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208377 INFO:root:found 1 records INFO:root:record: nmdc:4bc80f2b19100437061d229234925f77, Read QC Activity for nmdc:mga0gf69 -INFO:root:PassingDataObject: nmdc:4c302bcb23f8ea114a90292b7a372bbc INFO:root:PassingDataObject: nmdc:075441ee46ef4168bb56232429fae353 +INFO:root:PassingDataObject: nmdc:4c302bcb23f8ea114a90292b7a372bbc INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208377 INFO:root:found 1 records INFO:root:record: nmdc:4bc80f2b19100437061d229234925f77, ReadBased Analysis Activity for nmdc:mga0gf69 -INFO:root:PassingDataObject: nmdc:73f86f2c973b377285bff389e68a79e8 -INFO:root:PassingDataObject: nmdc:71120d925f8faf51dd9b0042006209f8 +INFO:root:PassingDataObject: nmdc:ede0ed26db514191367b0b58d983813d INFO:root:PassingDataObject: nmdc:f698ef97a5f22ea749033d9ab4457b89 +INFO:root:PassingDataObject: nmdc:73f86f2c973b377285bff389e68a79e8 +INFO:root:PassingDataObject: nmdc:ee79753220c12a7c03213ca71f75b799 INFO:root:PassingDataObject: nmdc:509cbd216ab75caea93f045f313d5f99 +INFO:root:PassingDataObject: nmdc:71120d925f8faf51dd9b0042006209f8 +INFO:root:PassingDataObject: nmdc:3ac031898fdd3ead4dfcdbcdbdf241e5 INFO:root:PassingDataObject: nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 INFO:root:PassingDataObject: nmdc:66802c0e650c028f42b2ea50a3d91112 -INFO:root:PassingDataObject: nmdc:ee79753220c12a7c03213ca71f75b799 -INFO:root:PassingDataObject: nmdc:ede0ed26db514191367b0b58d983813d -INFO:root:PassingDataObject: nmdc:3ac031898fdd3ead4dfcdbcdbdf241e5 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208377 INFO:root:found 1 records INFO:root:record: nmdc:4bc80f2b19100437061d229234925f77, Assembly Activity for nmdc:mga0gf69 -INFO:root:PassingDataObject: nmdc:ba275c221b798de815490718a47eb0ec -INFO:root:PassingDataObject: nmdc:43af1044fb76662a430a3490042bfc6c INFO:root:PassingDataObject: nmdc:be81ebec4e6ae2495cc0a35da3522db2 +INFO:root:PassingDataObject: nmdc:ba275c221b798de815490718a47eb0ec INFO:root:PassingDataObject: nmdc:fe4273654869d5be23aaa9db11f716ba INFO:root:PassingDataObject: nmdc:f8a32182da7e995f36abdf2c97b02ef3 +INFO:root:PassingDataObject: nmdc:43af1044fb76662a430a3490042bfc6c INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208377 INFO:root:found 1 records INFO:root:record: nmdc:4bc80f2b19100437061d229234925f77, Annotation Activity for nmdc:mga0gf69 -INFO:root:PassingDataObject: nmdc:45314d07926b00b57a3c6f3eda67db39 -INFO:root:PassingDataObject: nmdc:62b8e5fd885b16514944ffdb03ff9529 -INFO:root:PassingDataObject: nmdc:9d19ae5c54ad45b519e07414f816db99 -INFO:root:PassingDataObject: nmdc:b718bfe282dd8e17ff28ceb8c5040eb1 INFO:root:PassingDataObject: nmdc:b5eb5f43b185e28881540fa33be4ce98 +INFO:root:PassingDataObject: nmdc:fccf3e3c00f2400f254660e3c01ba355 INFO:root:PassingDataObject: nmdc:465b8b5648d3877563e21459baa016b0 -INFO:root:PassingDataObject: nmdc:3b677273ef4b7ab14ec7b7d0b289a968 -INFO:root:PassingDataObject: nmdc:7255c7479d65ab98310a7c3aa3420696 -INFO:root:PassingDataObject: nmdc:c95d41db153af6626cf39ae02a03c203 +INFO:root:PassingDataObject: nmdc:9d19ae5c54ad45b519e07414f816db99 INFO:root:PassingDataObject: nmdc:9054f1b8512cf07caba4104c59ee863f -INFO:root:PassingDataObject: nmdc:44a138ee64fdfe3c45d5e521bbe61996 -INFO:root:PassingDataObject: nmdc:935c1dbdef56e5f8f40d6ec00f3a847b -INFO:root:PassingDataObject: nmdc:007514d0b4166c1c7b9faab350a10150 -INFO:root:PassingDataObject: nmdc:ea605ebc42729be9809d26cb5d6884ef INFO:root:PassingDataObject: nmdc:93e957e241ac769f5741fadea02307a2 -INFO:root:PassingDataObject: nmdc:fccf3e3c00f2400f254660e3c01ba355 +INFO:root:PassingDataObject: nmdc:935c1dbdef56e5f8f40d6ec00f3a847b INFO:root:PassingDataObject: nmdc:e4514717d63c7f3f68c27c8f8c5ad699 +INFO:root:PassingDataObject: nmdc:3b677273ef4b7ab14ec7b7d0b289a968 +INFO:root:PassingDataObject: nmdc:44a138ee64fdfe3c45d5e521bbe61996 +INFO:root:PassingDataObject: nmdc:62b8e5fd885b16514944ffdb03ff9529 +INFO:root:PassingDataObject: nmdc:ea605ebc42729be9809d26cb5d6884ef +INFO:root:PassingDataObject: nmdc:c95d41db153af6626cf39ae02a03c203 +INFO:root:PassingDataObject: nmdc:b718bfe282dd8e17ff28ceb8c5040eb1 INFO:root:PassingDataObject: nmdc:6f0ba8e50c4cfcafcddfe89a0c2ac093 +INFO:root:PassingDataObject: nmdc:7255c7479d65ab98310a7c3aa3420696 +INFO:root:PassingDataObject: nmdc:45314d07926b00b57a3c6f3eda67db39 INFO:root:PassingDataObject: nmdc:f5a0649ad8674e9d8540e75e313cbb4a +INFO:root:PassingDataObject: nmdc:007514d0b4166c1c7b9faab350a10150 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208377 INFO:root:found 1 records INFO:root:record: nmdc:4bc80f2b19100437061d229234925f77, MAGs Analysis Activity for nmdc:mga0gf69 INFO:root:PassingDataObject: nmdc:0e23788fdbc9e1438362da119c49bb41 INFO:root:PassingDataObject: nmdc:589ee8228d8f10afcb67fdf1bdd7f5df INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208377 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-3d7ev832 INFO:root:legacy_id: gold:Gp0208378 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-3d7ev832 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:1d2ea6cc3c176479f6355a6716bf0279 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, Read QC Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:f89cbebe67bdb294f56643e9ac620a4a INFO:root:PassingDataObject: nmdc:03ecac4d7f4f784f702d04d14095c5e7 +INFO:root:PassingDataObject: nmdc:f89cbebe67bdb294f56643e9ac620a4a INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, ReadBased Analysis Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:463e5e53fa4c0f645a814e39ba85c329 -INFO:root:PassingDataObject: nmdc:8abd613779718c12c609379d66886d97 -INFO:root:PassingDataObject: nmdc:fd64b4244fd5526177002b86f841e31e -INFO:root:PassingDataObject: nmdc:8fa9d96b295c71a8046986782df92fd5 INFO:root:PassingDataObject: nmdc:8656547aa697221a5232f049f7592306 -INFO:root:PassingDataObject: nmdc:1441315d236b82b36e8a4c67e2969141 +INFO:root:PassingDataObject: nmdc:ee0e42f3c3013512a38d3ac8f6ac815c +INFO:root:PassingDataObject: nmdc:8fa9d96b295c71a8046986782df92fd5 INFO:root:PassingDataObject: nmdc:cab593cada3a0d02f31d9f5ca3cf29cb INFO:root:PassingDataObject: nmdc:1c5213a5e2c2d9f365334d8cf632b5b7 -INFO:root:PassingDataObject: nmdc:ee0e42f3c3013512a38d3ac8f6ac815c +INFO:root:PassingDataObject: nmdc:8abd613779718c12c609379d66886d97 +INFO:root:PassingDataObject: nmdc:1441315d236b82b36e8a4c67e2969141 +INFO:root:PassingDataObject: nmdc:463e5e53fa4c0f645a814e39ba85c329 +INFO:root:PassingDataObject: nmdc:fd64b4244fd5526177002b86f841e31e INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, Assembly Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:06d6f1fab40b95f10f83f3884077b009 INFO:root:PassingDataObject: nmdc:6585b5e80d7700342c4aa37eec8d8805 -INFO:root:PassingDataObject: nmdc:17a6139866e85d3b12b248ee384deadb INFO:root:PassingDataObject: nmdc:40b2d245e0383ec17b05c63262ff9ee2 INFO:root:PassingDataObject: nmdc:13a8624df8f7d9b939c9fb270a26e312 +INFO:root:PassingDataObject: nmdc:06d6f1fab40b95f10f83f3884077b009 +INFO:root:PassingDataObject: nmdc:17a6139866e85d3b12b248ee384deadb INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, Annotation Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:ce78a344d5d9c083bbac0fd324bea056 -INFO:root:PassingDataObject: nmdc:2fa3e76cb50af89efc8bbe7c2b68661c +INFO:root:PassingDataObject: nmdc:9fb9db523b76d9ae84daee744388b183 INFO:root:PassingDataObject: nmdc:d31b2c79108c130accbfcb00144f4ee7 -INFO:root:PassingDataObject: nmdc:b120ef200b7b3602b66f62de017e5395 -INFO:root:PassingDataObject: nmdc:b9bce92071cb4d9be68d94625948eedd +INFO:root:PassingDataObject: nmdc:846bba0f775bae1f37508fb45b69a5c4 INFO:root:PassingDataObject: nmdc:158b63991865e3bac26da1c66c9d84b2 INFO:root:PassingDataObject: nmdc:85c542d300bafe0e35ce31858a86cd83 -INFO:root:PassingDataObject: nmdc:8a44baf85b03131edd3402d70dbad6e7 +INFO:root:PassingDataObject: nmdc:d576e6d68abc5e54ab33c28534e551f5 +INFO:root:PassingDataObject: nmdc:b120ef200b7b3602b66f62de017e5395 +INFO:root:PassingDataObject: nmdc:93837b2553946f59c030ffb543f0daf9 +INFO:root:PassingDataObject: nmdc:8f65bae7b6b41c1b363f9d40461dafc7 +INFO:root:PassingDataObject: nmdc:ce78a344d5d9c083bbac0fd324bea056 INFO:root:PassingDataObject: nmdc:26690c42049c29c4dda494d7e1d6edc8 -INFO:root:PassingDataObject: nmdc:9fd148401268bd82900a989c79977654 +INFO:root:PassingDataObject: nmdc:76e2c3f1253e32b4b433db1893dbb2ec INFO:root:PassingDataObject: nmdc:54200ad91443d8bbdde0b19b66562a06 -INFO:root:PassingDataObject: nmdc:9fb9db523b76d9ae84daee744388b183 +INFO:root:PassingDataObject: nmdc:2fa3e76cb50af89efc8bbe7c2b68661c +INFO:root:PassingDataObject: nmdc:9fd148401268bd82900a989c79977654 +INFO:root:PassingDataObject: nmdc:b9bce92071cb4d9be68d94625948eedd INFO:root:PassingDataObject: nmdc:0d7e23f3f195ca2cebf98d4906016943 -INFO:root:PassingDataObject: nmdc:846bba0f775bae1f37508fb45b69a5c4 -INFO:root:PassingDataObject: nmdc:8f65bae7b6b41c1b363f9d40461dafc7 INFO:root:PassingDataObject: nmdc:62202109d83401ba184a7732c4e08739 -INFO:root:PassingDataObject: nmdc:93837b2553946f59c030ffb543f0daf9 -INFO:root:PassingDataObject: nmdc:d576e6d68abc5e54ab33c28534e551f5 -INFO:root:PassingDataObject: nmdc:76e2c3f1253e32b4b433db1893dbb2ec +INFO:root:PassingDataObject: nmdc:8a44baf85b03131edd3402d70dbad6e7 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208378 INFO:root:found 1 records INFO:root:record: nmdc:ed20a72457dcd6a3e1dce626d6ee0151, MAGs Analysis Activity for nmdc:mga0pd81 -INFO:root:PassingDataObject: nmdc:629f314f6dfe250389601988d79909dd INFO:root:PassingDataObject: nmdc:379625b242d9dde68afe38cb8fdbcfc3 +INFO:root:PassingDataObject: nmdc:629f314f6dfe250389601988d79909dd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208378 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-176k6334 INFO:root:legacy_id: gold:Gp0208382 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-176k6334 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7b093e525bf7741654105516790060a0 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, Read QC Activity for nmdc:mga01972 INFO:root:PassingDataObject: nmdc:7d72a04d4682974fd3ea7fa4a4c1501f INFO:root:PassingDataObject: nmdc:cc7885ab3d8c8970aa3e95a661a18928 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, ReadBased Analysis Activity for nmdc:mga01972 -INFO:root:PassingDataObject: nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 +INFO:root:PassingDataObject: nmdc:5b34fe8f176d00ad621e343cee280407 +INFO:root:PassingDataObject: nmdc:a3ee040f811c7a64e1fbe391de379be3 INFO:root:PassingDataObject: nmdc:d4f5a4872fcf73915531b24326d777e6 INFO:root:PassingDataObject: nmdc:82a5192e01f389d0ec580bd9c6cd93dc INFO:root:PassingDataObject: nmdc:44f324c080104c4b837dfff2c618dd71 -INFO:root:PassingDataObject: nmdc:ae0cf9645216f4b684949ef778a2f82d -INFO:root:PassingDataObject: nmdc:a3ee040f811c7a64e1fbe391de379be3 -INFO:root:PassingDataObject: nmdc:5b34fe8f176d00ad621e343cee280407 INFO:root:PassingDataObject: nmdc:b791766971652f65ffb1ac027441da43 +INFO:root:PassingDataObject: nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 +INFO:root:PassingDataObject: nmdc:ae0cf9645216f4b684949ef778a2f82d INFO:root:PassingDataObject: nmdc:b067154c72ddb59c09db18ecc24a01f4 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, Assembly Activity for nmdc:mga01972 -INFO:root:PassingDataObject: nmdc:e2241b87bfda9ceb529818473447288f -INFO:root:PassingDataObject: nmdc:24922b1bf381227856efb374b3b1b91a INFO:root:PassingDataObject: nmdc:adabe10644ac8372d0e744d87bff893e INFO:root:PassingDataObject: nmdc:55ba5ffe4f656ec1259f19f10515f3ad INFO:root:PassingDataObject: nmdc:c6a3dbe8001532a74a4085c9070d472f +INFO:root:PassingDataObject: nmdc:24922b1bf381227856efb374b3b1b91a +INFO:root:PassingDataObject: nmdc:e2241b87bfda9ceb529818473447288f INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, Annotation Activity for nmdc:mga01972 +INFO:root:PassingDataObject: nmdc:0d12f7425f45b6f0fffb1d4c20358931 INFO:root:PassingDataObject: nmdc:74eedd956bd111c2397d62e384fd12f6 -INFO:root:PassingDataObject: nmdc:52db1647730573154b6d458913e9e352 INFO:root:PassingDataObject: nmdc:c593cc4c68034516d0c48fea6ddb11db -INFO:root:PassingDataObject: nmdc:7b31d44d0cf70a5fdd248518d12eb0c0 -INFO:root:PassingDataObject: nmdc:03bd2c3851b517f8a0d7119ef0dc27bd -INFO:root:PassingDataObject: nmdc:fd66762beb73e76a6f24cce894e91efc -INFO:root:PassingDataObject: nmdc:0498814aced65245e90bcc1caf65969c -INFO:root:PassingDataObject: nmdc:0d12f7425f45b6f0fffb1d4c20358931 -INFO:root:PassingDataObject: nmdc:87903dfc4a582004594daaabe4ddea58 INFO:root:PassingDataObject: nmdc:51cf1ff5aad44b74144b259327ac53d8 +INFO:root:PassingDataObject: nmdc:517cf1ed491520c6287b98d319b678f0 +INFO:root:PassingDataObject: nmdc:03bd2c3851b517f8a0d7119ef0dc27bd +INFO:root:PassingDataObject: nmdc:52db1647730573154b6d458913e9e352 INFO:root:PassingDataObject: nmdc:f93b12ab4a8d50d1e128f9913c192e55 +INFO:root:PassingDataObject: nmdc:fd66762beb73e76a6f24cce894e91efc +INFO:root:PassingDataObject: nmdc:39385c841825c8b64bc852ad4b4d76c2 +INFO:root:PassingDataObject: nmdc:9c4656ca2bad47f1af0ba52b86bb20c4 INFO:root:PassingDataObject: nmdc:7ec701d7ba7ccd10345e3316e05afa58 INFO:root:PassingDataObject: nmdc:2b324dc2b31628ac54f8bca27e24a04e -INFO:root:PassingDataObject: nmdc:9c4656ca2bad47f1af0ba52b86bb20c4 -INFO:root:PassingDataObject: nmdc:517cf1ed491520c6287b98d319b678f0 INFO:root:PassingDataObject: nmdc:22a95490206bce4c760f06c93adf7b53 -INFO:root:PassingDataObject: nmdc:48268f58e361b7c14e3a8e17ad829c51 -INFO:root:PassingDataObject: nmdc:39385c841825c8b64bc852ad4b4d76c2 +INFO:root:PassingDataObject: nmdc:7b31d44d0cf70a5fdd248518d12eb0c0 INFO:root:PassingDataObject: nmdc:6a3e16c34cbf86f0aef81f21dbd8fa4d +INFO:root:PassingDataObject: nmdc:87903dfc4a582004594daaabe4ddea58 +INFO:root:PassingDataObject: nmdc:0498814aced65245e90bcc1caf65969c +INFO:root:PassingDataObject: nmdc:48268f58e361b7c14e3a8e17ad829c51 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208382 INFO:root:found 1 records INFO:root:record: nmdc:388875e2de566072575b3d41fb034e50, MAGs Analysis Activity for nmdc:mga01972 INFO:root:PassingDataObject: nmdc:2d9dfe30c181834c010329a495ca0f4c INFO:root:PassingDataObject: nmdc:99061b9f54afdddfbeba1d32362c6237 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208382 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-ppm1kc56 INFO:root:legacy_id: gold:Gp0208379 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-ppm1kc56 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:59532226ec5755915a032e602dc04a03 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208379 INFO:root:found 1 records INFO:root:record: nmdc:10f32f6b190a35a62306be4e42a4c625, Read QC Activity for nmdc:mga04k45 -INFO:root:PassingDataObject: nmdc:a73ea53daff026c7656d6c346678e6f2 INFO:root:PassingDataObject: nmdc:a5c0d39f4849b43bebf5ebfde7ad9abf +INFO:root:PassingDataObject: nmdc:a73ea53daff026c7656d6c346678e6f2 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208379 INFO:root:found 1 records INFO:root:record: nmdc:10f32f6b190a35a62306be4e42a4c625, ReadBased Analysis Activity for nmdc:mga04k45 -INFO:root:PassingDataObject: nmdc:ec244af617bdd43044a0636840ae0ed9 -INFO:root:PassingDataObject: nmdc:44ac21b09dea0484ded48c2644ab40d9 +INFO:root:PassingDataObject: nmdc:fd9075271692c37b143498df3e047158 INFO:root:PassingDataObject: nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 -INFO:root:PassingDataObject: nmdc:7351615ec85d3e089ab11e6a4b476808 +INFO:root:PassingDataObject: nmdc:79ea8eb051f7bf1a75a50ed608b09a6c INFO:root:PassingDataObject: nmdc:bfeff910dd78b70e5d591232a8239f56 +INFO:root:PassingDataObject: nmdc:44ac21b09dea0484ded48c2644ab40d9 INFO:root:PassingDataObject: nmdc:483399641738a013f3e65c63b8a9e643 -INFO:root:PassingDataObject: nmdc:fd9075271692c37b143498df3e047158 INFO:root:PassingDataObject: nmdc:2116369b3394b4d51977f00653798c91 -INFO:root:PassingDataObject: nmdc:79ea8eb051f7bf1a75a50ed608b09a6c +INFO:root:PassingDataObject: nmdc:ec244af617bdd43044a0636840ae0ed9 +INFO:root:PassingDataObject: nmdc:7351615ec85d3e089ab11e6a4b476808 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208379 INFO:root:found 1 records INFO:root:record: nmdc:10f32f6b190a35a62306be4e42a4c625, Assembly Activity for nmdc:mga04k45 -INFO:root:PassingDataObject: nmdc:6e131d6d178a532582a0a7577c5fdf9a INFO:root:PassingDataObject: nmdc:2e4e9b52a43b6885985efb30ee795b23 INFO:root:PassingDataObject: nmdc:3df51a0a6d09862eeb7e32afa8d093ee INFO:root:PassingDataObject: nmdc:da28bc0afe95a4879ce8bee55f716bb2 INFO:root:PassingDataObject: nmdc:3ad61e488202766a4970fe3ec0b7579e +INFO:root:PassingDataObject: nmdc:6e131d6d178a532582a0a7577c5fdf9a INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208379 INFO:root:found 1 records INFO:root:record: nmdc:10f32f6b190a35a62306be4e42a4c625, Annotation Activity for nmdc:mga04k45 -INFO:root:PassingDataObject: nmdc:47a224d768f344d4ec6c9fc0939bcc61 -INFO:root:PassingDataObject: nmdc:533de1475f3f8bf3cc10d1f33395a1f1 INFO:root:PassingDataObject: nmdc:24bcd84b56ffff6df1416d5899fb5f6d -INFO:root:PassingDataObject: nmdc:35b525eebf9ce3314a55994b3eed1d8f -INFO:root:PassingDataObject: nmdc:1fb0f5845db5a441dfbc7f9ce7f6b07c -INFO:root:PassingDataObject: nmdc:d9ddd95eb0ebfe0a69a8920ca7aa3eea +INFO:root:PassingDataObject: nmdc:9c83c1299e168766498fe6d4092f66a4 INFO:root:PassingDataObject: nmdc:7af497de6152805d1149ba314be7944a -INFO:root:PassingDataObject: nmdc:bfaa51a9c5820c02f91a92c73dae603c -INFO:root:PassingDataObject: nmdc:ac70c5b8c890b5551421ad2ac73ec0b2 -INFO:root:PassingDataObject: nmdc:a3dc034404ea19889350581866b4d2f9 -INFO:root:PassingDataObject: nmdc:bd4284dc711ef9b5aa5b5473f4450ce8 +INFO:root:PassingDataObject: nmdc:1fb0f5845db5a441dfbc7f9ce7f6b07c INFO:root:PassingDataObject: nmdc:d0e94af2c4ea57e1084b7d947ad8ad56 +INFO:root:PassingDataObject: nmdc:533de1475f3f8bf3cc10d1f33395a1f1 +INFO:root:PassingDataObject: nmdc:7ef08a1de281caf5a4f22266b51418e2 +INFO:root:PassingDataObject: nmdc:47a224d768f344d4ec6c9fc0939bcc61 +INFO:root:PassingDataObject: nmdc:ac70c5b8c890b5551421ad2ac73ec0b2 +INFO:root:PassingDataObject: nmdc:ad59422cc73e5776248c63c39a22dbf3 INFO:root:PassingDataObject: nmdc:497bb5579cc72c67abcf90713744489f +INFO:root:PassingDataObject: nmdc:35b525eebf9ce3314a55994b3eed1d8f +INFO:root:PassingDataObject: nmdc:bd4284dc711ef9b5aa5b5473f4450ce8 +INFO:root:PassingDataObject: nmdc:bfaa51a9c5820c02f91a92c73dae603c INFO:root:PassingDataObject: nmdc:8c29d0b328cb4db63a9f93dd56feb093 INFO:root:PassingDataObject: nmdc:c15687dfbf3ea7ad49a3f4f94c73a3ff -INFO:root:PassingDataObject: nmdc:7ef08a1de281caf5a4f22266b51418e2 -INFO:root:PassingDataObject: nmdc:9c83c1299e168766498fe6d4092f66a4 -INFO:root:PassingDataObject: nmdc:ad59422cc73e5776248c63c39a22dbf3 +INFO:root:PassingDataObject: nmdc:a3dc034404ea19889350581866b4d2f9 +INFO:root:PassingDataObject: nmdc:d9ddd95eb0ebfe0a69a8920ca7aa3eea INFO:root:PassingDataObject: nmdc:10e7b612dc57253c4554d63a28db1c21 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208379 INFO:root:found 1 records INFO:root:record: nmdc:10f32f6b190a35a62306be4e42a4c625, MAGs Analysis Activity for nmdc:mga04k45 -INFO:root:PassingDataObject: nmdc:b16abc4d504c39801b199c2036d44df9 INFO:root:PassingDataObject: nmdc:6ead38b9e08927498534683efaff475f +INFO:root:PassingDataObject: nmdc:b16abc4d504c39801b199c2036d44df9 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208379 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-gsx01g02 INFO:root:legacy_id: gold:Gp0208381 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gsx01g02 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d08893db578667fdc61428fde84f8279 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, Read QC Activity for nmdc:mga0kh66 -INFO:root:PassingDataObject: nmdc:5bc67a2b476b96593eed2aecfe758e7d INFO:root:PassingDataObject: nmdc:9ecfcc475d9f8f4137fe20aecd120eb6 +INFO:root:PassingDataObject: nmdc:5bc67a2b476b96593eed2aecfe758e7d INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, ReadBased Analysis Activity for nmdc:mga0kh66 +INFO:root:PassingDataObject: nmdc:bf74bc0f07ececef23e455da7229f7d2 INFO:root:PassingDataObject: nmdc:989ad96a68d6a8210fd8e6feeffd4337 -INFO:root:PassingDataObject: nmdc:d6a6066ca1f7c854ce204fa52286b618 -INFO:root:PassingDataObject: nmdc:756f3c11ef403ba8f1a240932c5fa284 -INFO:root:PassingDataObject: nmdc:c51a18ac682f7ee4feb2af515f611ba4 INFO:root:PassingDataObject: nmdc:ebfe831bbab778e828dea284f6c2db17 INFO:root:PassingDataObject: nmdc:a214e38f694df694b742558e0131f0c7 INFO:root:PassingDataObject: nmdc:7742daba0ff3d113ba8bb6b101acf491 -INFO:root:PassingDataObject: nmdc:bf74bc0f07ececef23e455da7229f7d2 INFO:root:PassingDataObject: nmdc:60270073bdb3dd9c3c5360fcf3b3c5c4 +INFO:root:PassingDataObject: nmdc:c51a18ac682f7ee4feb2af515f611ba4 +INFO:root:PassingDataObject: nmdc:d6a6066ca1f7c854ce204fa52286b618 +INFO:root:PassingDataObject: nmdc:756f3c11ef403ba8f1a240932c5fa284 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, Assembly Activity for nmdc:mga0kh66 -INFO:root:PassingDataObject: nmdc:860417fb127246c5b1ffa38c0a3f3401 -INFO:root:PassingDataObject: nmdc:e587d98e7e01661b57c1a67084d2a84e +INFO:root:PassingDataObject: nmdc:5e6cdd777519107821142fa7be2735c2 INFO:root:PassingDataObject: nmdc:07718de6c41dec7b2122cc6bfa6437e0 +INFO:root:PassingDataObject: nmdc:e587d98e7e01661b57c1a67084d2a84e +INFO:root:PassingDataObject: nmdc:860417fb127246c5b1ffa38c0a3f3401 INFO:root:PassingDataObject: nmdc:ec95c16ace60dd3c175ab95255e77d05 -INFO:root:PassingDataObject: nmdc:5e6cdd777519107821142fa7be2735c2 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, Annotation Activity for nmdc:mga0kh66 -INFO:root:PassingDataObject: nmdc:8a39c9782810eff3b3038cef75a67f03 +INFO:root:PassingDataObject: nmdc:a8d3be278a439a395ca7515c63da4088 INFO:root:PassingDataObject: nmdc:d04bb69c0e749a94a98020e134dddff1 INFO:root:PassingDataObject: nmdc:455ec78cddc57344d2b33f06220e4b01 -INFO:root:PassingDataObject: nmdc:4d3b18b3f6be21cb219e9a272f9baa49 -INFO:root:PassingDataObject: nmdc:26c2eb2b8d25b4e3e2df6337c44f5fdb -INFO:root:PassingDataObject: nmdc:11060d59ee78d511a550c21e12f8da70 -INFO:root:PassingDataObject: nmdc:c4759fbea589d4f22a671a1e854f8cc8 INFO:root:PassingDataObject: nmdc:71989d53f119804ed780c8a738092bec -INFO:root:PassingDataObject: nmdc:a8d3be278a439a395ca7515c63da4088 INFO:root:PassingDataObject: nmdc:1cb3147a437ed92c93781b77294622c8 -INFO:root:PassingDataObject: nmdc:2a92a4d1e98cfd43cef89048cc4cea11 -INFO:root:PassingDataObject: nmdc:c07d9a1b5fc34577d8995112a509d13d +INFO:root:PassingDataObject: nmdc:9bf2f5f1ff1926278cf5a09b6680df49 +INFO:root:PassingDataObject: nmdc:26c2eb2b8d25b4e3e2df6337c44f5fdb +INFO:root:PassingDataObject: nmdc:4d3b18b3f6be21cb219e9a272f9baa49 INFO:root:PassingDataObject: nmdc:fad09131d20ac5cbb6dfab585d631cc7 +INFO:root:PassingDataObject: nmdc:e1d33e5275ffd8359bac51f0665a0e8c INFO:root:PassingDataObject: nmdc:7408ddbacaca7b9f7ddae727e41f4298 -INFO:root:PassingDataObject: nmdc:e37c2b67c42e5fe809fea33977e7766e -INFO:root:PassingDataObject: nmdc:cc4860bda2b70251ea7d4e61dd597792 -INFO:root:PassingDataObject: nmdc:9bf2f5f1ff1926278cf5a09b6680df49 INFO:root:PassingDataObject: nmdc:668f056e29d4cb076a5a89adda2a830d -INFO:root:PassingDataObject: nmdc:e1d33e5275ffd8359bac51f0665a0e8c +INFO:root:PassingDataObject: nmdc:c4759fbea589d4f22a671a1e854f8cc8 +INFO:root:PassingDataObject: nmdc:cc4860bda2b70251ea7d4e61dd597792 +INFO:root:PassingDataObject: nmdc:8a39c9782810eff3b3038cef75a67f03 +INFO:root:PassingDataObject: nmdc:11060d59ee78d511a550c21e12f8da70 +INFO:root:PassingDataObject: nmdc:e37c2b67c42e5fe809fea33977e7766e +INFO:root:PassingDataObject: nmdc:c07d9a1b5fc34577d8995112a509d13d +INFO:root:PassingDataObject: nmdc:2a92a4d1e98cfd43cef89048cc4cea11 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208381 INFO:root:found 1 records INFO:root:record: nmdc:9a3092c69fde30ac1bd3457c1b27e056, MAGs Analysis Activity for nmdc:mga0kh66 INFO:root:PassingDataObject: nmdc:fdf425db6cd1006efd98d034f6b3f775 INFO:root:PassingDataObject: nmdc:f0541241d8636d6691b0abdb73ddf4ee INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208381 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-b9j4pk97 INFO:root:legacy_id: gold:Gp0213331 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-b9j4pk97 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4779dacd0e7071f528be8c03fac547e7 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, Read QC Activity for nmdc:mga0yv47 -INFO:root:PassingDataObject: nmdc:fb46d869b2bff56092a3156c551d043a INFO:root:PassingDataObject: nmdc:44a35e5b16a815edc18ef14c1f815fdb +INFO:root:PassingDataObject: nmdc:fb46d869b2bff56092a3156c551d043a INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, ReadBased Analysis Activity for nmdc:mga0yv47 -INFO:root:PassingDataObject: nmdc:b541e0ffe85bff612b7c3271a1625109 -INFO:root:PassingDataObject: nmdc:2c462c007af3a4df4a37f416712c0f93 INFO:root:PassingDataObject: nmdc:91c860160ee3a88b2230d5de3909feb3 -INFO:root:PassingDataObject: nmdc:8d5fadb6a2a348506d17c489c516dd1f +INFO:root:PassingDataObject: nmdc:f21b0efef9933cd29d7e8c8c80713a17 INFO:root:PassingDataObject: nmdc:2cb788f136a41bb370ed607e380b1277 INFO:root:PassingDataObject: nmdc:c8a828420c66f32138f3151e12c93cf4 +INFO:root:PassingDataObject: nmdc:8d5fadb6a2a348506d17c489c516dd1f INFO:root:PassingDataObject: nmdc:23836128606562e0a2337fbca8b8f21d +INFO:root:PassingDataObject: nmdc:2c462c007af3a4df4a37f416712c0f93 INFO:root:PassingDataObject: nmdc:f5b303204f5abfcef0764cb9a9fe6960 -INFO:root:PassingDataObject: nmdc:f21b0efef9933cd29d7e8c8c80713a17 +INFO:root:PassingDataObject: nmdc:b541e0ffe85bff612b7c3271a1625109 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, Assembly Activity for nmdc:mga0yv47 -INFO:root:PassingDataObject: nmdc:46a01c1d28aac5bd419e33c63ad4a42e -INFO:root:PassingDataObject: nmdc:91fc24b40783287114877002c00d382a -INFO:root:PassingDataObject: nmdc:8430e331eb8914436cc0473c95d1c3f5 INFO:root:PassingDataObject: nmdc:6b73e09e3e8bdc0890dca90c0a92a140 +INFO:root:PassingDataObject: nmdc:8430e331eb8914436cc0473c95d1c3f5 INFO:root:PassingDataObject: nmdc:056937db3bb74e6e62cf4adf5a8a52fa +INFO:root:PassingDataObject: nmdc:46a01c1d28aac5bd419e33c63ad4a42e +INFO:root:PassingDataObject: nmdc:91fc24b40783287114877002c00d382a INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, Annotation Activity for nmdc:mga0yv47 -INFO:root:PassingDataObject: nmdc:121509a5382747f05911ea42d3270884 -INFO:root:PassingDataObject: nmdc:28e72923c189493c393aee8749f6026c -INFO:root:PassingDataObject: nmdc:4361a38f030ba8fd7538dbc74af8e2b2 -INFO:root:PassingDataObject: nmdc:52dda09fe6b211dd4051248a56d67a2d -INFO:root:PassingDataObject: nmdc:c1ac32c445d7e73d35c0837f615800ba -INFO:root:PassingDataObject: nmdc:39feae032125d565de59050cf82dac1b -INFO:root:PassingDataObject: nmdc:be23b332475b60dadc6e54d29248efa1 -INFO:root:PassingDataObject: nmdc:82ad058b7d703681f55467942c57343a -INFO:root:PassingDataObject: nmdc:f9b9e480f9f5c63bdc44deebab4fc9ff -INFO:root:PassingDataObject: nmdc:d38e2e0ec0cf53df8f69bd4066a08adc -INFO:root:PassingDataObject: nmdc:e2d61d768d76e7d5d581a01160694494 INFO:root:PassingDataObject: nmdc:5cedd14e45e2339a29c1911c376bee59 INFO:root:PassingDataObject: nmdc:3d615ed43449911d496616a304ba4601 -INFO:root:PassingDataObject: nmdc:b08ddb4bd80f25099e9cd09141e65e7a -INFO:root:PassingDataObject: nmdc:268a6dcb32d83c0687c06865cd8dfa62 +INFO:root:PassingDataObject: nmdc:f9b9e480f9f5c63bdc44deebab4fc9ff +INFO:root:PassingDataObject: nmdc:e2d61d768d76e7d5d581a01160694494 INFO:root:PassingDataObject: nmdc:42c0c32bd026bdc62af8873aa00883c3 -INFO:root:PassingDataObject: nmdc:81a77ac38063376e5601b123abd0acf9 -INFO:root:PassingDataObject: nmdc:08f68ccdf85d7c1b90a9562a9accdb60 +INFO:root:PassingDataObject: nmdc:121509a5382747f05911ea42d3270884 +INFO:root:PassingDataObject: nmdc:39feae032125d565de59050cf82dac1b INFO:root:PassingDataObject: nmdc:72abe0df3ce4deb32147cd7da9632fc6 +INFO:root:PassingDataObject: nmdc:08f68ccdf85d7c1b90a9562a9accdb60 +INFO:root:PassingDataObject: nmdc:268a6dcb32d83c0687c06865cd8dfa62 +INFO:root:PassingDataObject: nmdc:c1ac32c445d7e73d35c0837f615800ba +INFO:root:PassingDataObject: nmdc:d38e2e0ec0cf53df8f69bd4066a08adc +INFO:root:PassingDataObject: nmdc:4361a38f030ba8fd7538dbc74af8e2b2 +INFO:root:PassingDataObject: nmdc:82ad058b7d703681f55467942c57343a +INFO:root:PassingDataObject: nmdc:52dda09fe6b211dd4051248a56d67a2d +INFO:root:PassingDataObject: nmdc:81a77ac38063376e5601b123abd0acf9 +INFO:root:PassingDataObject: nmdc:28e72923c189493c393aee8749f6026c +INFO:root:PassingDataObject: nmdc:b08ddb4bd80f25099e9cd09141e65e7a +INFO:root:PassingDataObject: nmdc:be23b332475b60dadc6e54d29248efa1 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213331 INFO:root:found 1 records INFO:root:record: nmdc:74b82dcdd4d848f43175639fdc0e06a0, MAGs Analysis Activity for nmdc:mga0yv47 INFO:root:PassingDataObject: nmdc:8f583c673d2d4468471cf88dbc82cdf1 INFO:root:PassingDataObject: nmdc:ca3feca5dd86df3252b788719a344ee1 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213331 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-38h78d16 INFO:root:legacy_id: gold:Gp0213334 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-38h78d16 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:908fe1703358c811ae7bf408886a6e87 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, Read QC Activity for nmdc:mga0mm58 -INFO:root:PassingDataObject: nmdc:ca8d24dea85bb47eb3982e32898257ce INFO:root:PassingDataObject: nmdc:400551f61fad6febea1245f3696f84c9 +INFO:root:PassingDataObject: nmdc:ca8d24dea85bb47eb3982e32898257ce INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, ReadBased Analysis Activity for nmdc:mga0mm58 +INFO:root:PassingDataObject: nmdc:773664b28b1c88402c02db092f267be7 INFO:root:PassingDataObject: nmdc:dd8c8bc59a700e644e19295f4613f8a5 -INFO:root:PassingDataObject: nmdc:db917434e3a8a394c929713367b6d60f -INFO:root:PassingDataObject: nmdc:e34462c20683f3942a0b44e14b86f099 -INFO:root:PassingDataObject: nmdc:835ffe62701fda30cbe2d7fa548f2388 -INFO:root:PassingDataObject: nmdc:b7b2169beb649e04645f638a1e2cb17b INFO:root:PassingDataObject: nmdc:fce7444c99f2d8006c798d798d4af9f8 +INFO:root:PassingDataObject: nmdc:db917434e3a8a394c929713367b6d60f INFO:root:PassingDataObject: nmdc:be61a2806915bce88f8d0c1f74e69e28 -INFO:root:PassingDataObject: nmdc:773664b28b1c88402c02db092f267be7 INFO:root:PassingDataObject: nmdc:878f1d1e4df4322d2832395aa2a0e8d3 +INFO:root:PassingDataObject: nmdc:835ffe62701fda30cbe2d7fa548f2388 +INFO:root:PassingDataObject: nmdc:e34462c20683f3942a0b44e14b86f099 +INFO:root:PassingDataObject: nmdc:b7b2169beb649e04645f638a1e2cb17b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, Assembly Activity for nmdc:mga0mm58 INFO:root:PassingDataObject: nmdc:a8e0351dd3d3290b94332377fd992ee9 -INFO:root:PassingDataObject: nmdc:082e91c0f9dbfb8be4545a068b856fc2 INFO:root:PassingDataObject: nmdc:e866c0e7b0eb54535e4476dfdad24b7c INFO:root:PassingDataObject: nmdc:885c30dd862ef3fc4926973fb4b01c8b INFO:root:PassingDataObject: nmdc:452a9abe77f69bdf383fd43c1172a40e +INFO:root:PassingDataObject: nmdc:082e91c0f9dbfb8be4545a068b856fc2 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, Annotation Activity for nmdc:mga0mm58 -INFO:root:PassingDataObject: nmdc:52d50ee90219e2af37fc5c39cc0fa915 -INFO:root:PassingDataObject: nmdc:671280443e76ae0f797845a4f166414a -INFO:root:PassingDataObject: nmdc:d74a13db31f56e47f40423aba6f781cd INFO:root:PassingDataObject: nmdc:9ca8374dea8b3e3f1d436dd3cafae0bf -INFO:root:PassingDataObject: nmdc:ce9c9a0f654fb47f222bfb6b646265c5 -INFO:root:PassingDataObject: nmdc:f726aa336fb8fe611c62e3a81cd7195c INFO:root:PassingDataObject: nmdc:1e0eb18e6a4ce97b8f4a4b6d819f31a1 -INFO:root:PassingDataObject: nmdc:d583142a07608226f87d740c8d08f2bd -INFO:root:PassingDataObject: nmdc:41d3ec26d013eeb575dee6207b6f1b86 -INFO:root:PassingDataObject: nmdc:d718a7f66f3117f37bbc59e571d818c8 -INFO:root:PassingDataObject: nmdc:ed6069307f41f569574cfa7c57d01038 -INFO:root:PassingDataObject: nmdc:815d12b45c5cc799bde03c2848591021 -INFO:root:PassingDataObject: nmdc:19f8eaaaae9e96fe0a5005c7fd47a166 INFO:root:PassingDataObject: nmdc:3749ef977c8f74b5735cb9e0e9792ad0 -INFO:root:PassingDataObject: nmdc:9c3aa83342ea8b06c93c7ed495f146df INFO:root:PassingDataObject: nmdc:d6394046f936fe9020ebfb59fbf13e54 INFO:root:PassingDataObject: nmdc:1dd277c87901d7f1d575ffe464d61450 +INFO:root:PassingDataObject: nmdc:ed6069307f41f569574cfa7c57d01038 +INFO:root:PassingDataObject: nmdc:d74a13db31f56e47f40423aba6f781cd +INFO:root:PassingDataObject: nmdc:671280443e76ae0f797845a4f166414a +INFO:root:PassingDataObject: nmdc:ce9c9a0f654fb47f222bfb6b646265c5 +INFO:root:PassingDataObject: nmdc:19f8eaaaae9e96fe0a5005c7fd47a166 +INFO:root:PassingDataObject: nmdc:815d12b45c5cc799bde03c2848591021 +INFO:root:PassingDataObject: nmdc:f726aa336fb8fe611c62e3a81cd7195c +INFO:root:PassingDataObject: nmdc:52d50ee90219e2af37fc5c39cc0fa915 +INFO:root:PassingDataObject: nmdc:d583142a07608226f87d740c8d08f2bd INFO:root:PassingDataObject: nmdc:d4190c6662d43be98e12be496523b3c7 +INFO:root:PassingDataObject: nmdc:d718a7f66f3117f37bbc59e571d818c8 +INFO:root:PassingDataObject: nmdc:41d3ec26d013eeb575dee6207b6f1b86 +INFO:root:PassingDataObject: nmdc:9c3aa83342ea8b06c93c7ed495f146df INFO:root:PassingDataObject: nmdc:b70bbcf2c37bd2633a8c62f57acc3c95 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213334 INFO:root:found 1 records INFO:root:record: nmdc:d90f8be8edd7379e27608511f42cce4f, MAGs Analysis Activity for nmdc:mga0mm58 INFO:root:PassingDataObject: nmdc:e96cf1e8d1e48b2df586d017e5016aeb INFO:root:PassingDataObject: nmdc:1bb15b32255fb4f04ca128ae841307be INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213334 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-ytakgm41 INFO:root:legacy_id: gold:Gp0213333 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-ytakgm41 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fb1897fb6c87bcf5b25c76e0ac149b67 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213333 INFO:root:found 1 records INFO:root:record: nmdc:911f1a5b4bc13cf661631e0ad96bc802, Read QC Activity for nmdc:mga0rg74 INFO:root:PassingDataObject: nmdc:00247c55ac3cea98fd1e3594774cd370 INFO:root:PassingDataObject: nmdc:8e93c7590bb9f9b6f559acb90d6c4f37 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213333 INFO:root:found 1 records INFO:root:record: nmdc:911f1a5b4bc13cf661631e0ad96bc802, ReadBased Analysis Activity for nmdc:mga0rg74 -INFO:root:PassingDataObject: nmdc:075f37069b66a9e1354572fc64b64d78 -INFO:root:PassingDataObject: nmdc:e91e296312f9b97c3e43d9ec437662db -INFO:root:PassingDataObject: nmdc:d5e7cce38a745ddb3733e9070f291f30 -INFO:root:PassingDataObject: nmdc:0008e32dd1b90922c3335ea7e050f9e7 INFO:root:PassingDataObject: nmdc:ac37e5f91352b5d004b6499f1c933e81 -INFO:root:PassingDataObject: nmdc:ea876b541cf655002daba6a3b6f19ae4 +INFO:root:PassingDataObject: nmdc:d5e7cce38a745ddb3733e9070f291f30 +INFO:root:PassingDataObject: nmdc:08cc61d8fede0602cf5b4e0c902e9697 INFO:root:PassingDataObject: nmdc:3d8efa2984296797b98d31258db2c1e9 +INFO:root:PassingDataObject: nmdc:ea876b541cf655002daba6a3b6f19ae4 INFO:root:PassingDataObject: nmdc:92d6845b03d1c9e06c77d247fd7a59c3 -INFO:root:PassingDataObject: nmdc:08cc61d8fede0602cf5b4e0c902e9697 +INFO:root:PassingDataObject: nmdc:075f37069b66a9e1354572fc64b64d78 +INFO:root:PassingDataObject: nmdc:0008e32dd1b90922c3335ea7e050f9e7 +INFO:root:PassingDataObject: nmdc:e91e296312f9b97c3e43d9ec437662db INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213333 INFO:root:found 1 records INFO:root:record: nmdc:911f1a5b4bc13cf661631e0ad96bc802, Assembly Activity for nmdc:mga0rg74 INFO:root:PassingDataObject: nmdc:0d7c3cfa223d081f55f047390a81b450 -INFO:root:PassingDataObject: nmdc:9db3f494f3373d5893a1fde528a08f1b -INFO:root:PassingDataObject: nmdc:d94c3d4aced63619e6d7ce617f60ede0 INFO:root:PassingDataObject: nmdc:77b1c42efa2b0e793eb3c90a09a53a27 +INFO:root:PassingDataObject: nmdc:9db3f494f3373d5893a1fde528a08f1b INFO:root:PassingDataObject: nmdc:4b07be82e2b87dc824fc32f48f1b9376 +INFO:root:PassingDataObject: nmdc:d94c3d4aced63619e6d7ce617f60ede0 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213333 INFO:root:found 1 records INFO:root:record: nmdc:911f1a5b4bc13cf661631e0ad96bc802, Annotation Activity for nmdc:mga0rg74 -INFO:root:PassingDataObject: nmdc:7e0d9984b9b5e6d8d0cec137d50505c9 -INFO:root:PassingDataObject: nmdc:beac587692b76481c1ce4fe60da68168 INFO:root:PassingDataObject: nmdc:353704959bb65d7317ad9d5255f0e9ec -INFO:root:PassingDataObject: nmdc:77913bbf7a8cea9807d38bd07f2f5159 -INFO:root:PassingDataObject: nmdc:b9231fd1689478c81739aa9b3d9dd675 -INFO:root:PassingDataObject: nmdc:62e1d2c55ba70885277fb29e57ebe14e -INFO:root:PassingDataObject: nmdc:406bf4b4f6b592cc9fac92459e384687 +INFO:root:PassingDataObject: nmdc:beac587692b76481c1ce4fe60da68168 +INFO:root:PassingDataObject: nmdc:8168bdb3c597dcdeb0aa8433f9ff22b2 +INFO:root:PassingDataObject: nmdc:302af4932298e6b2b66745df4e509434 +INFO:root:PassingDataObject: nmdc:517c3e5c49607166372f1de009b5d7b5 +INFO:root:PassingDataObject: nmdc:81f074596944d4110a792c84dfa1dda5 INFO:root:PassingDataObject: nmdc:dcee988f5f02d73c250f0152aca5f0cb INFO:root:PassingDataObject: nmdc:79f209a68e83c56a7740a9c5dd570e1a +INFO:root:PassingDataObject: nmdc:b9231fd1689478c81739aa9b3d9dd675 +INFO:root:PassingDataObject: nmdc:77913bbf7a8cea9807d38bd07f2f5159 +INFO:root:PassingDataObject: nmdc:e564ac0e23452a8091d9bc8cc34028e9 INFO:root:PassingDataObject: nmdc:b50ba4b67a5c4093ab736076def3fb39 -INFO:root:PassingDataObject: nmdc:81f074596944d4110a792c84dfa1dda5 -INFO:root:PassingDataObject: nmdc:302af4932298e6b2b66745df4e509434 -INFO:root:PassingDataObject: nmdc:8168bdb3c597dcdeb0aa8433f9ff22b2 -INFO:root:PassingDataObject: nmdc:517c3e5c49607166372f1de009b5d7b5 -INFO:root:PassingDataObject: nmdc:43c2b2486136a7619bc02a4d3ed5e2bd -INFO:root:PassingDataObject: nmdc:e564ac0e23452a8091d9bc8cc34028e9 -INFO:root:PassingDataObject: nmdc:d68af3852125c050997d4d1396104674 INFO:root:PassingDataObject: nmdc:954f9c92f884c175e54373cc60e2b64f +INFO:root:PassingDataObject: nmdc:406bf4b4f6b592cc9fac92459e384687 INFO:root:PassingDataObject: nmdc:ed0f2f979b41595fb28f9a9286908771 +INFO:root:PassingDataObject: nmdc:43c2b2486136a7619bc02a4d3ed5e2bd +INFO:root:PassingDataObject: nmdc:62e1d2c55ba70885277fb29e57ebe14e +INFO:root:PassingDataObject: nmdc:7e0d9984b9b5e6d8d0cec137d50505c9 +INFO:root:PassingDataObject: nmdc:d68af3852125c050997d4d1396104674 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213333 INFO:root:found 1 records INFO:root:record: nmdc:911f1a5b4bc13cf661631e0ad96bc802, MAGs Analysis Activity for nmdc:mga0rg74 -INFO:root:PassingDataObject: nmdc:30a0c2fe420c0bf3467158a721f24dc3 INFO:root:PassingDataObject: nmdc:6d824c2057e4976e1ac45ec169461395 +INFO:root:PassingDataObject: nmdc:30a0c2fe420c0bf3467158a721f24dc3 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213333 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-gbv7zh09 INFO:root:legacy_id: gold:Gp0213332 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gbv7zh09 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:da44ab401932bc11c5c7e2ec4f50d945 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, Read QC Activity for nmdc:mga0bm49 -INFO:root:PassingDataObject: nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 INFO:root:PassingDataObject: nmdc:be4348289be81f991af1486ad6e5dd51 +INFO:root:PassingDataObject: nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, ReadBased Analysis Activity for nmdc:mga0bm49 -INFO:root:PassingDataObject: nmdc:a2565349a1e98abb96b8da88ee108b55 -INFO:root:PassingDataObject: nmdc:705c914a44264725bd5ad30e74a4919a INFO:root:PassingDataObject: nmdc:09e02f5247faaa726b561cf782922340 -INFO:root:PassingDataObject: nmdc:4266fbced36d9ee69e63c4eaacd28665 -INFO:root:PassingDataObject: nmdc:b9148a049a0e97bea5e85c37de00d674 -INFO:root:PassingDataObject: nmdc:707e4377811aca0e7d02133092a89edd INFO:root:PassingDataObject: nmdc:4f331f13976704fc41572eed8e6cc2d0 INFO:root:PassingDataObject: nmdc:341eb58042a151931224a0839280c7dc +INFO:root:PassingDataObject: nmdc:705c914a44264725bd5ad30e74a4919a INFO:root:PassingDataObject: nmdc:7d33a4811210762b1928c5c17f376c3f +INFO:root:PassingDataObject: nmdc:707e4377811aca0e7d02133092a89edd +INFO:root:PassingDataObject: nmdc:4266fbced36d9ee69e63c4eaacd28665 +INFO:root:PassingDataObject: nmdc:a2565349a1e98abb96b8da88ee108b55 +INFO:root:PassingDataObject: nmdc:b9148a049a0e97bea5e85c37de00d674 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, Assembly Activity for nmdc:mga0bm49 -INFO:root:PassingDataObject: nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a -INFO:root:PassingDataObject: nmdc:0208512cc7a3301b279641703c2a1504 INFO:root:PassingDataObject: nmdc:1ac6a3066bd295bbee2cc8a822c3ebe8 +INFO:root:PassingDataObject: nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a INFO:root:PassingDataObject: nmdc:23f5a0946351e2f19e3645314176dd67 INFO:root:PassingDataObject: nmdc:89e1e1cc7625f9fa924fd4056dbf37e2 +INFO:root:PassingDataObject: nmdc:0208512cc7a3301b279641703c2a1504 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, Annotation Activity for nmdc:mga0bm49 +INFO:root:PassingDataObject: nmdc:ebe48cd9014de805c0e4fbac3303de17 +INFO:root:PassingDataObject: nmdc:42e04ca80f7f90030cc55f88eb921184 INFO:root:PassingDataObject: nmdc:59af950b2113c89c0fe24c8790eceeba -INFO:root:PassingDataObject: nmdc:7cd4379f4819a0ed74f12d808455c955 +INFO:root:PassingDataObject: nmdc:c4d08b03afc1cb34733a836516041994 +INFO:root:PassingDataObject: nmdc:4889f391a9941911bd2909e7849b038e +INFO:root:PassingDataObject: nmdc:282bcab593d74add1aa86ded3d524418 INFO:root:PassingDataObject: nmdc:27e2fc5e26eec6199bcb7da19e2b23fb -INFO:root:PassingDataObject: nmdc:ebe48cd9014de805c0e4fbac3303de17 INFO:root:PassingDataObject: nmdc:a085c8a797b276804e939726d641af97 -INFO:root:PassingDataObject: nmdc:51095a0a50c4861c643a5646053a6a65 -INFO:root:PassingDataObject: nmdc:1e980082bed35a0ff4b14795089c2ef6 INFO:root:PassingDataObject: nmdc:cf9d6f35c3de5ec41e906d74a23f05fd -INFO:root:PassingDataObject: nmdc:422b5be7f3656ada4dda780ae2679d2a -INFO:root:PassingDataObject: nmdc:42e04ca80f7f90030cc55f88eb921184 -INFO:root:PassingDataObject: nmdc:20d5aaa37f26fe462596f160c08ca5e5 INFO:root:PassingDataObject: nmdc:bf47a0f9758517edea4597d444d0314c -INFO:root:PassingDataObject: nmdc:c4d08b03afc1cb34733a836516041994 -INFO:root:PassingDataObject: nmdc:4889f391a9941911bd2909e7849b038e -INFO:root:PassingDataObject: nmdc:859338b53423d31904cfbe53901bb672 +INFO:root:PassingDataObject: nmdc:51095a0a50c4861c643a5646053a6a65 INFO:root:PassingDataObject: nmdc:14ce307f52824253ff14f58e71904d91 -INFO:root:PassingDataObject: nmdc:f137f3a9035136e8d6b7cd55ca862b42 -INFO:root:PassingDataObject: nmdc:282bcab593d74add1aa86ded3d524418 +INFO:root:PassingDataObject: nmdc:7cd4379f4819a0ed74f12d808455c955 +INFO:root:PassingDataObject: nmdc:422b5be7f3656ada4dda780ae2679d2a +INFO:root:PassingDataObject: nmdc:859338b53423d31904cfbe53901bb672 INFO:root:PassingDataObject: nmdc:2f59766cf827d20c58246460cf94d60d +INFO:root:PassingDataObject: nmdc:1e980082bed35a0ff4b14795089c2ef6 +INFO:root:PassingDataObject: nmdc:20d5aaa37f26fe462596f160c08ca5e5 +INFO:root:PassingDataObject: nmdc:f137f3a9035136e8d6b7cd55ca862b42 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213332 INFO:root:found 1 records INFO:root:record: nmdc:0da2e2db8c28647c5410ec6396ef743b, MAGs Analysis Activity for nmdc:mga0bm49 -INFO:root:PassingDataObject: nmdc:f3e4dae9029fb498ac85daa24ffc1222 INFO:root:PassingDataObject: nmdc:5e3b1476e9ec74bf37cedc0cbda4abd9 +INFO:root:PassingDataObject: nmdc:f3e4dae9029fb498ac85daa24ffc1222 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213332 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-4rwmp312 INFO:root:legacy_id: gold:Gp0213336 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-4rwmp312 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:625075a39014d701fda177605f8f8858 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213336 INFO:root:found 1 records INFO:root:record: nmdc:55a79b5dd58771e28686665e3c3faa0c, Read QC Activity for nmdc:mga0rt44 -INFO:root:PassingDataObject: nmdc:57c6656a6c38d6b5fd52a1c81895949c INFO:root:PassingDataObject: nmdc:548a09fc6278448fc152176b66116078 +INFO:root:PassingDataObject: nmdc:57c6656a6c38d6b5fd52a1c81895949c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213336 INFO:root:found 1 records INFO:root:record: nmdc:55a79b5dd58771e28686665e3c3faa0c, ReadBased Analysis Activity for nmdc:mga0rt44 -INFO:root:PassingDataObject: nmdc:70777cd32a3f9cc0e00841da144f1cf8 INFO:root:PassingDataObject: nmdc:c05d10c098c25ef44fbe6e27b4c88c86 -INFO:root:PassingDataObject: nmdc:42a99767c538f2d4211f14a253c91aa4 -INFO:root:PassingDataObject: nmdc:60e6f45dc4b2c03995647c6b4b780550 -INFO:root:PassingDataObject: nmdc:eb71ec27a8d6d5881c7d31091faf9501 INFO:root:PassingDataObject: nmdc:bfdc7ae8e2bc129a548daf6da8884212 -INFO:root:PassingDataObject: nmdc:521fe79e687e03eefe255088d4e58b27 +INFO:root:PassingDataObject: nmdc:60e6f45dc4b2c03995647c6b4b780550 INFO:root:PassingDataObject: nmdc:1cd68fe37b48de6f8f542a71a550a796 +INFO:root:PassingDataObject: nmdc:eb71ec27a8d6d5881c7d31091faf9501 +INFO:root:PassingDataObject: nmdc:70777cd32a3f9cc0e00841da144f1cf8 +INFO:root:PassingDataObject: nmdc:42a99767c538f2d4211f14a253c91aa4 INFO:root:PassingDataObject: nmdc:5089c93436a2d4968b97357391f7e8b8 +INFO:root:PassingDataObject: nmdc:521fe79e687e03eefe255088d4e58b27 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213336 INFO:root:found 1 records INFO:root:record: nmdc:55a79b5dd58771e28686665e3c3faa0c, Assembly Activity for nmdc:mga0rt44 +INFO:root:PassingDataObject: nmdc:0458326566d970cfeddde250d7385b03 INFO:root:PassingDataObject: nmdc:10d49353a8c8641dfb78a0c07b0ce282 -INFO:root:PassingDataObject: nmdc:3b0bc3c833d9e7ab66af8d0d84164e0a INFO:root:PassingDataObject: nmdc:0943c2c0da63e91144a1e6dd80d9a985 +INFO:root:PassingDataObject: nmdc:3b0bc3c833d9e7ab66af8d0d84164e0a INFO:root:PassingDataObject: nmdc:e97ddf9a9e2b4a49326c19db7cd4ab43 -INFO:root:PassingDataObject: nmdc:0458326566d970cfeddde250d7385b03 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213336 INFO:root:found 1 records INFO:root:record: nmdc:55a79b5dd58771e28686665e3c3faa0c, Annotation Activity for nmdc:mga0rt44 INFO:root:PassingDataObject: nmdc:1d11d0706c7f93cbdd917b933f3480f6 -INFO:root:PassingDataObject: nmdc:1d87115c442a1f83190ae47c7fe4011f -INFO:root:PassingDataObject: nmdc:9ebdfacaf54a24610c7563fa8a284aab -INFO:root:PassingDataObject: nmdc:209b4592ed4ede6d0210cb153a221405 INFO:root:PassingDataObject: nmdc:b41299917f11443dc03d69103de4d4d3 -INFO:root:PassingDataObject: nmdc:7b8450ff69da0daf2b2de6a493904d77 -INFO:root:PassingDataObject: nmdc:4eaa8dd743aad8db7574b4a0868ecdcd +INFO:root:PassingDataObject: nmdc:b719991a565c73f605777d5ec450bfb4 +INFO:root:PassingDataObject: nmdc:7363d3dd8fbc551726d74650490afcbd INFO:root:PassingDataObject: nmdc:77c246c4ca608cf0b8e84f613ab3cf62 +INFO:root:PassingDataObject: nmdc:3394f04036a1d9fe39aa7ce8952be6ec +INFO:root:PassingDataObject: nmdc:802c369f63dd999c598bbdb51e6294f4 +INFO:root:PassingDataObject: nmdc:209b4592ed4ede6d0210cb153a221405 +INFO:root:PassingDataObject: nmdc:2165685295996a9b4d09f5487a3b6a84 +INFO:root:PassingDataObject: nmdc:4eaa8dd743aad8db7574b4a0868ecdcd +INFO:root:PassingDataObject: nmdc:1d87115c442a1f83190ae47c7fe4011f INFO:root:PassingDataObject: nmdc:2d65021163d14b4e1afc3e3a18b37180 +INFO:root:PassingDataObject: nmdc:413265f22f10475c37b5743edee0bc1c INFO:root:PassingDataObject: nmdc:4fda86c78c8ab3a500c939f33005756e -INFO:root:PassingDataObject: nmdc:2165685295996a9b4d09f5487a3b6a84 +INFO:root:PassingDataObject: nmdc:9ebdfacaf54a24610c7563fa8a284aab +INFO:root:PassingDataObject: nmdc:b798290a270d2e6d30cb5d47b1b25fb6 INFO:root:PassingDataObject: nmdc:31e72c239c392d0b3c49729486d559b2 -INFO:root:PassingDataObject: nmdc:3394f04036a1d9fe39aa7ce8952be6ec -INFO:root:PassingDataObject: nmdc:413265f22f10475c37b5743edee0bc1c INFO:root:PassingDataObject: nmdc:a88624e393765fd4462668a234e08c32 -INFO:root:PassingDataObject: nmdc:b719991a565c73f605777d5ec450bfb4 -INFO:root:PassingDataObject: nmdc:7363d3dd8fbc551726d74650490afcbd -INFO:root:PassingDataObject: nmdc:802c369f63dd999c598bbdb51e6294f4 -INFO:root:PassingDataObject: nmdc:b798290a270d2e6d30cb5d47b1b25fb6 +INFO:root:PassingDataObject: nmdc:7b8450ff69da0daf2b2de6a493904d77 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213336 INFO:root:found 1 records INFO:root:record: nmdc:55a79b5dd58771e28686665e3c3faa0c, MAGs Analysis Activity for nmdc:mga0rt44 INFO:root:PassingDataObject: nmdc:7c436a0d9712d1b066a30789878ca7a0 INFO:root:PassingDataObject: nmdc:4a42af7183ce2fcd2d6c9ffc91b5069d INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213336 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-t6acv418 INFO:root:legacy_id: gold:Gp0213335 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-t6acv418 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:12b43da62aae4332869c589de5853062 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213335 INFO:root:found 1 records INFO:root:record: nmdc:4a61b553ef3a69dd77964cc973bc8dc9, Read QC Activity for nmdc:mga0qb88 INFO:root:PassingDataObject: nmdc:e5f021fe306870603c6a2c5361b74ec4 INFO:root:PassingDataObject: nmdc:0724fb909f8360b900443623dbcf83d7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213335 INFO:root:found 1 records INFO:root:record: nmdc:4a61b553ef3a69dd77964cc973bc8dc9, ReadBased Analysis Activity for nmdc:mga0qb88 -INFO:root:PassingDataObject: nmdc:e7261968652b1d553c1be543b120b27e -INFO:root:PassingDataObject: nmdc:a1599cb0082b1fe131190910d097a469 -INFO:root:PassingDataObject: nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 -INFO:root:PassingDataObject: nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 INFO:root:PassingDataObject: nmdc:50a28b128e4f5f462b1cd0af666da6b5 +INFO:root:PassingDataObject: nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 +INFO:root:PassingDataObject: nmdc:a1599cb0082b1fe131190910d097a469 INFO:root:PassingDataObject: nmdc:9d4512c07a7e449a5a554c7f59163331 +INFO:root:PassingDataObject: nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 +INFO:root:PassingDataObject: nmdc:2c512607f7735e7101654a1b08665eef +INFO:root:PassingDataObject: nmdc:e7261968652b1d553c1be543b120b27e INFO:root:PassingDataObject: nmdc:eed53b443c40b88bdc3dd73da18d01ab INFO:root:PassingDataObject: nmdc:fe1dc4c852803fdf077c2f8c139bb27e -INFO:root:PassingDataObject: nmdc:2c512607f7735e7101654a1b08665eef INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213335 INFO:root:found 1 records INFO:root:record: nmdc:4a61b553ef3a69dd77964cc973bc8dc9, Assembly Activity for nmdc:mga0qb88 INFO:root:PassingDataObject: nmdc:0fec8d61f70b5c0b14993d3f29a1274e -INFO:root:PassingDataObject: nmdc:81010adabdfe6803e88d304331157710 INFO:root:PassingDataObject: nmdc:7658c6216a5bb8954ba11e9ac1d8d498 -INFO:root:PassingDataObject: nmdc:309988684d9da7eb4b2773943f1f9085 INFO:root:PassingDataObject: nmdc:48a79f97b3b00d3656d52e1cdcf63704 +INFO:root:PassingDataObject: nmdc:309988684d9da7eb4b2773943f1f9085 +INFO:root:PassingDataObject: nmdc:81010adabdfe6803e88d304331157710 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213335 INFO:root:found 1 records INFO:root:record: nmdc:4a61b553ef3a69dd77964cc973bc8dc9, Annotation Activity for nmdc:mga0qb88 -INFO:root:PassingDataObject: nmdc:df217bcf975467a46e6d2e4c49d1fbf7 -INFO:root:PassingDataObject: nmdc:60fbedcd216f515df432b05cde0167bd +INFO:root:PassingDataObject: nmdc:cdd9ccaccccbe3cac025d29bbb227bd6 +INFO:root:PassingDataObject: nmdc:4dcd2a6fb1cde4636c3a439f28ebcc07 INFO:root:PassingDataObject: nmdc:bb8e1a98b37dc9d38ec23de4dfb27322 -INFO:root:PassingDataObject: nmdc:2dc57644ef57bfa463fa160af63ac3cb -INFO:root:PassingDataObject: nmdc:9f5a0e5eb26bba187e0bc674889549c6 -INFO:root:PassingDataObject: nmdc:291474f27b200284f4a6d3756c9e952b INFO:root:PassingDataObject: nmdc:0bc2b668fdb4493be66e91e9a8140479 -INFO:root:PassingDataObject: nmdc:e84a316709e755fb6dca39a61617c352 -INFO:root:PassingDataObject: nmdc:f1431ec8027739453171991dadd0ec3b INFO:root:PassingDataObject: nmdc:ed6798286d569b99d4fbfbfbd8d52d87 -INFO:root:PassingDataObject: nmdc:4dcd2a6fb1cde4636c3a439f28ebcc07 -INFO:root:PassingDataObject: nmdc:cdd9ccaccccbe3cac025d29bbb227bd6 -INFO:root:PassingDataObject: nmdc:e75220a1919aa32a81c4d84bd234b7f7 -INFO:root:PassingDataObject: nmdc:a75dd63dd066112f4c73ad1b160a7463 -INFO:root:PassingDataObject: nmdc:fc3e720f37042b170a3242dcda4a80f7 -INFO:root:PassingDataObject: nmdc:a7e73e8280c7e40c6f58e7555eab1785 INFO:root:PassingDataObject: nmdc:699066fa8f3a85ad9c15a4cd36ad1da1 +INFO:root:PassingDataObject: nmdc:2dc57644ef57bfa463fa160af63ac3cb +INFO:root:PassingDataObject: nmdc:a75dd63dd066112f4c73ad1b160a7463 +INFO:root:PassingDataObject: nmdc:e84a316709e755fb6dca39a61617c352 INFO:root:PassingDataObject: nmdc:1f6660eefbdc8ff5c225251605be0841 +INFO:root:PassingDataObject: nmdc:e75220a1919aa32a81c4d84bd234b7f7 +INFO:root:PassingDataObject: nmdc:9f5a0e5eb26bba187e0bc674889549c6 INFO:root:PassingDataObject: nmdc:3d8bcc07c3f44ddd9d1ccb6da9bafeda +INFO:root:PassingDataObject: nmdc:291474f27b200284f4a6d3756c9e952b +INFO:root:PassingDataObject: nmdc:a7e73e8280c7e40c6f58e7555eab1785 +INFO:root:PassingDataObject: nmdc:fc3e720f37042b170a3242dcda4a80f7 +INFO:root:PassingDataObject: nmdc:df217bcf975467a46e6d2e4c49d1fbf7 +INFO:root:PassingDataObject: nmdc:60fbedcd216f515df432b05cde0167bd +INFO:root:PassingDataObject: nmdc:f1431ec8027739453171991dadd0ec3b INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213335 INFO:root:found 1 records INFO:root:record: nmdc:4a61b553ef3a69dd77964cc973bc8dc9, MAGs Analysis Activity for nmdc:mga0qb88 INFO:root:PassingDataObject: nmdc:3847f360136b1aac3940e4c81e3dbe31 INFO:root:PassingDataObject: nmdc:b968edd3946904cd66df63913655bcb2 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213335 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-pwwc3q04 INFO:root:legacy_id: gold:Gp0213339 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-pwwc3q04 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:722f2dbb28d08d2f65cacea4c5435da2 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213339 INFO:root:found 1 records INFO:root:record: nmdc:d5bfaa5de752e0fb580863a72c5660d5, Read QC Activity for nmdc:mga09m47 INFO:root:PassingDataObject: nmdc:1bde0a8a9a5532b4d2565f468158fb7b INFO:root:PassingDataObject: nmdc:9d0da0c395e1006577ace130471186fd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213339 INFO:root:found 1 records INFO:root:record: nmdc:d5bfaa5de752e0fb580863a72c5660d5, ReadBased Analysis Activity for nmdc:mga09m47 -INFO:root:PassingDataObject: nmdc:e738ee2e3aa9d0dcb33b765880763505 -INFO:root:PassingDataObject: nmdc:1ab53810aec7d030b99f666cb6cb8599 -INFO:root:PassingDataObject: nmdc:0bec77a51b6d2bea22a87806d8312308 -INFO:root:PassingDataObject: nmdc:7912c0b2e56700f6f465b0570c08325e +INFO:root:PassingDataObject: nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a INFO:root:PassingDataObject: nmdc:d361583c803e94e6ebd9c91bf184107c INFO:root:PassingDataObject: nmdc:43d29eef149bc475f58a33d4d39b3870 -INFO:root:PassingDataObject: nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a +INFO:root:PassingDataObject: nmdc:0bec77a51b6d2bea22a87806d8312308 +INFO:root:PassingDataObject: nmdc:e738ee2e3aa9d0dcb33b765880763505 INFO:root:PassingDataObject: nmdc:821e594f40527f78cc9ba890eff6810a INFO:root:PassingDataObject: nmdc:c8319bbc7c65d0031cd161cb55c28569 +INFO:root:PassingDataObject: nmdc:1ab53810aec7d030b99f666cb6cb8599 +INFO:root:PassingDataObject: nmdc:7912c0b2e56700f6f465b0570c08325e INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213339 INFO:root:found 1 records INFO:root:record: nmdc:d5bfaa5de752e0fb580863a72c5660d5, Assembly Activity for nmdc:mga09m47 -INFO:root:PassingDataObject: nmdc:e3d8ae36d4aab87700ef3abc3268f909 -INFO:root:PassingDataObject: nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 -INFO:root:PassingDataObject: nmdc:1290fa0f1f45c1e7cddb8462b21ade6f INFO:root:PassingDataObject: nmdc:3953f6dace895eb7ce802eea576fbbde +INFO:root:PassingDataObject: nmdc:1290fa0f1f45c1e7cddb8462b21ade6f +INFO:root:PassingDataObject: nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 +INFO:root:PassingDataObject: nmdc:e3d8ae36d4aab87700ef3abc3268f909 INFO:root:PassingDataObject: nmdc:7ef7c2514f6682e3b004f9cb541f6e72 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213339 INFO:root:found 1 records INFO:root:record: nmdc:d5bfaa5de752e0fb580863a72c5660d5, Annotation Activity for nmdc:mga09m47 -INFO:root:PassingDataObject: nmdc:17c878bd5fef924203fc47808cf49eb1 -INFO:root:PassingDataObject: nmdc:fe36158d768b13039e33010fa93d2360 +INFO:root:PassingDataObject: nmdc:6d64979efbf7c572f3b2bfc35a2de2b5 INFO:root:PassingDataObject: nmdc:5a37b6d1335eaf38ebcb5d78c580e6ef INFO:root:PassingDataObject: nmdc:40f7887c96948e1cc1607f6fbd32d50e +INFO:root:PassingDataObject: nmdc:251d2396996ea1902ac342159f717b65 +INFO:root:PassingDataObject: nmdc:9539560ae69b1c85440fffb9491b1b8e +INFO:root:PassingDataObject: nmdc:1ad000ccd668ce454d60fcc76f15e61b +INFO:root:PassingDataObject: nmdc:028728c35338843103bd8106ba1dea95 +INFO:root:PassingDataObject: nmdc:fe36158d768b13039e33010fa93d2360 INFO:root:PassingDataObject: nmdc:92ad4c01bea33d979af545f7cea0ebb4 +INFO:root:PassingDataObject: nmdc:af7ecd6979eb75f870bde41aec427719 +INFO:root:PassingDataObject: nmdc:b08e38ab325687379ab1ad0fb114e899 INFO:root:PassingDataObject: nmdc:172f913f7146fa052ad625a715325741 -INFO:root:PassingDataObject: nmdc:06c665825e03df02d4781dbc52fc0999 +INFO:root:PassingDataObject: nmdc:669dc7f5a22354fd6754dab736265d8b +INFO:root:PassingDataObject: nmdc:17c878bd5fef924203fc47808cf49eb1 INFO:root:PassingDataObject: nmdc:6816d848e7737590828d149eb1eb8d63 -INFO:root:PassingDataObject: nmdc:1ad000ccd668ce454d60fcc76f15e61b -INFO:root:PassingDataObject: nmdc:251d2396996ea1902ac342159f717b65 -INFO:root:PassingDataObject: nmdc:39dc1db48734fd51c1abab1c7322fa42 -INFO:root:PassingDataObject: nmdc:b08e38ab325687379ab1ad0fb114e899 INFO:root:PassingDataObject: nmdc:a6ba30afa224c591cf7c7d5ad2233bb0 +INFO:root:PassingDataObject: nmdc:06c665825e03df02d4781dbc52fc0999 +INFO:root:PassingDataObject: nmdc:39dc1db48734fd51c1abab1c7322fa42 INFO:root:PassingDataObject: nmdc:9a2799e2ac483dab03eeab9e2e47d180 -INFO:root:PassingDataObject: nmdc:af7ecd6979eb75f870bde41aec427719 -INFO:root:PassingDataObject: nmdc:028728c35338843103bd8106ba1dea95 -INFO:root:PassingDataObject: nmdc:669dc7f5a22354fd6754dab736265d8b -INFO:root:PassingDataObject: nmdc:9539560ae69b1c85440fffb9491b1b8e -INFO:root:PassingDataObject: nmdc:6d64979efbf7c572f3b2bfc35a2de2b5 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213339 INFO:root:found 1 records INFO:root:record: nmdc:d5bfaa5de752e0fb580863a72c5660d5, MAGs Analysis Activity for nmdc:mga09m47 INFO:root:PassingDataObject: nmdc:264ede58c5b1af460e650435590dcb5c INFO:root:PassingDataObject: nmdc:be31cfb2ba35b9669d2415a0b5d5b3c7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213339 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-g9t2xf29 INFO:root:legacy_id: gold:Gp0213337 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-g9t2xf29 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8d9b361423c5819782294a8789859b9b INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, Read QC Activity for nmdc:mga0b303 -INFO:root:PassingDataObject: nmdc:42c9d55e0faed7b9ad85986bcd9b24c0 INFO:root:PassingDataObject: nmdc:408ae81c9ee616178cb0c87195316403 +INFO:root:PassingDataObject: nmdc:42c9d55e0faed7b9ad85986bcd9b24c0 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, ReadBased Analysis Activity for nmdc:mga0b303 -INFO:root:PassingDataObject: nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c -INFO:root:PassingDataObject: nmdc:02d268c49f49ec83b65b6395555ee780 INFO:root:PassingDataObject: nmdc:fe8030bc7f875c91dc1261824bde2d32 +INFO:root:PassingDataObject: nmdc:09bfc13dc9a390c3ee97e13baa5f7adf INFO:root:PassingDataObject: nmdc:4d739fc9668c7cdf9ddc040214f60cf9 -INFO:root:PassingDataObject: nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa -INFO:root:PassingDataObject: nmdc:16548c714efadc888fc21e9dc91cd38c +INFO:root:PassingDataObject: nmdc:02d268c49f49ec83b65b6395555ee780 INFO:root:PassingDataObject: nmdc:5975aa9e874a2aee8c733ae8c679cc0a -INFO:root:PassingDataObject: nmdc:09bfc13dc9a390c3ee97e13baa5f7adf +INFO:root:PassingDataObject: nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c INFO:root:PassingDataObject: nmdc:99b86a6cbd2e5f5b1a7ffa0222fc0c78 +INFO:root:PassingDataObject: nmdc:16548c714efadc888fc21e9dc91cd38c +INFO:root:PassingDataObject: nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, Assembly Activity for nmdc:mga0b303 +INFO:root:PassingDataObject: nmdc:2055a22c0e446c599107da987bf71f53 INFO:root:PassingDataObject: nmdc:1ca2df80fed289a8b8157a0e28f8078c -INFO:root:PassingDataObject: nmdc:b48f26208908b023264455703accf2e8 -INFO:root:PassingDataObject: nmdc:732e1036130617f691e05c2e88cdb7ca INFO:root:PassingDataObject: nmdc:61321e6aa841ecf52cfcc1ebcdf9bb5a -INFO:root:PassingDataObject: nmdc:2055a22c0e446c599107da987bf71f53 +INFO:root:PassingDataObject: nmdc:732e1036130617f691e05c2e88cdb7ca +INFO:root:PassingDataObject: nmdc:b48f26208908b023264455703accf2e8 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, Annotation Activity for nmdc:mga0b303 -INFO:root:PassingDataObject: nmdc:d92f90e2dbe1f0c0f2d909a7483183c6 -INFO:root:PassingDataObject: nmdc:23fa011ddefafc0181efc8b64e9fb8b8 INFO:root:PassingDataObject: nmdc:0724ae02fd0d7c91b80ccee1db97b997 -INFO:root:PassingDataObject: nmdc:0a5c81275fe86812aa2a9a03445ce7db +INFO:root:PassingDataObject: nmdc:23fa011ddefafc0181efc8b64e9fb8b8 INFO:root:PassingDataObject: nmdc:e6befa18002d08e337c9c19d8ec134b4 -INFO:root:PassingDataObject: nmdc:ac89a70057bae098c9cc18a27ce3cfc5 -INFO:root:PassingDataObject: nmdc:b2db7bccac03fad63b2c3a78dba272a5 INFO:root:PassingDataObject: nmdc:d8926a74fdae6c6dfcc6752139b5a1b9 INFO:root:PassingDataObject: nmdc:ddf8db72be51acd7373f3006eb0c72f7 -INFO:root:PassingDataObject: nmdc:199d63c8bddef62de89dbef771911ba6 +INFO:root:PassingDataObject: nmdc:ac89a70057bae098c9cc18a27ce3cfc5 +INFO:root:PassingDataObject: nmdc:98e93990aa9e86a52c9c5bbe8626e79b INFO:root:PassingDataObject: nmdc:006ef2128b70f7b4a79d08c749bacf42 -INFO:root:PassingDataObject: nmdc:e729fb28f4f112987fca4b28c042fd0a -INFO:root:PassingDataObject: nmdc:69655dace031567379dd8f822027f515 -INFO:root:PassingDataObject: nmdc:a58d7d7837132940f5abb5898ae2a642 +INFO:root:PassingDataObject: nmdc:d92f90e2dbe1f0c0f2d909a7483183c6 +INFO:root:PassingDataObject: nmdc:199d63c8bddef62de89dbef771911ba6 INFO:root:PassingDataObject: nmdc:ac48bb75f2aac30f1824fc3244c10e57 +INFO:root:PassingDataObject: nmdc:a58d7d7837132940f5abb5898ae2a642 +INFO:root:PassingDataObject: nmdc:69655dace031567379dd8f822027f515 INFO:root:PassingDataObject: nmdc:cb523bbe9a212e59697b6c95e3083a7f -INFO:root:PassingDataObject: nmdc:98e93990aa9e86a52c9c5bbe8626e79b -INFO:root:PassingDataObject: nmdc:266c0fb500e05c49c8b3001b2337ed8f +INFO:root:PassingDataObject: nmdc:0a5c81275fe86812aa2a9a03445ce7db INFO:root:PassingDataObject: nmdc:15126953e8e9477a1ab306e2cf76c4bf +INFO:root:PassingDataObject: nmdc:b2db7bccac03fad63b2c3a78dba272a5 +INFO:root:PassingDataObject: nmdc:e729fb28f4f112987fca4b28c042fd0a +INFO:root:PassingDataObject: nmdc:266c0fb500e05c49c8b3001b2337ed8f INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213337 INFO:root:found 1 records INFO:root:record: nmdc:cd06850d2a637c505a957ae164e0b7f2, MAGs Analysis Activity for nmdc:mga0b303 -INFO:root:PassingDataObject: nmdc:1d46e77d8f4526621d8fc1873e83c25e INFO:root:PassingDataObject: nmdc:4b0afce66fa44173ba0ac1782e6aefac +INFO:root:PassingDataObject: nmdc:1d46e77d8f4526621d8fc1873e83c25e INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213337 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-b8rmfw44 INFO:root:legacy_id: gold:Gp0213342 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-b8rmfw44 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8a573eec92876f6621ae5305d9ed3bd2 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213342 INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, Read QC Activity for nmdc:mga0x806 -INFO:root:PassingDataObject: nmdc:f28407b79185b4e3c313f40159eb14ec INFO:root:PassingDataObject: nmdc:33fc49613058b0c8f86e575ea61fb2b1 +INFO:root:PassingDataObject: nmdc:f28407b79185b4e3c313f40159eb14ec INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213342 INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, ReadBased Analysis Activity for nmdc:mga0x806 -INFO:root:PassingDataObject: nmdc:d9698d68c9284f872a7dbd35bb65ac6a -INFO:root:PassingDataObject: nmdc:4972393ee4a6ddec7e85c6c1cbecfa06 INFO:root:PassingDataObject: nmdc:fe51c74e0d293fa876a4901ac324f4c2 +INFO:root:PassingDataObject: nmdc:52e679ca629ec3a1362cfc1cfe322634 INFO:root:PassingDataObject: nmdc:4be597d8228615626aaeacf3a49ff1f1 INFO:root:PassingDataObject: nmdc:443956865b96dafaacf0840ce48af215 -INFO:root:PassingDataObject: nmdc:52e679ca629ec3a1362cfc1cfe322634 -INFO:root:PassingDataObject: nmdc:e25ad52b779d9726eb5b560ecaa7324b -INFO:root:PassingDataObject: nmdc:a024c99e60397c07ea093f5b54c16c22 INFO:root:PassingDataObject: nmdc:624228246f986e137e024254248de1b5 +INFO:root:PassingDataObject: nmdc:a024c99e60397c07ea093f5b54c16c22 +INFO:root:PassingDataObject: nmdc:d9698d68c9284f872a7dbd35bb65ac6a +INFO:root:PassingDataObject: nmdc:4972393ee4a6ddec7e85c6c1cbecfa06 +INFO:root:PassingDataObject: nmdc:e25ad52b779d9726eb5b560ecaa7324b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213342 INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, Assembly Activity for nmdc:mga0x806 +INFO:root:PassingDataObject: nmdc:75285f282f19f1277195e80035bc15c1 +INFO:root:PassingDataObject: nmdc:7e71569c6e5d1b93e9b9db9135aabaf7 INFO:root:PassingDataObject: nmdc:69a51c8e981eaed934c8000fd16fc7d9 INFO:root:PassingDataObject: nmdc:4c1f0442578d7649ce41a599eb14d091 INFO:root:PassingDataObject: nmdc:f5473910671d0c5c169246a972dbf619 -INFO:root:PassingDataObject: nmdc:75285f282f19f1277195e80035bc15c1 -INFO:root:PassingDataObject: nmdc:7e71569c6e5d1b93e9b9db9135aabaf7 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213342 INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, Annotation Activity for nmdc:mga0x806 -INFO:root:PassingDataObject: nmdc:efc037f18c1fc10ec47d382997ded572 -INFO:root:PassingDataObject: nmdc:b4b3a8b83844a44922ef5bb9e19f3c1f -INFO:root:PassingDataObject: nmdc:b7efbb84a2073e7c127b1ed5fe389843 INFO:root:PassingDataObject: nmdc:4e5ff60527aa9e3a89ac55d7d61d2b71 -INFO:root:PassingDataObject: nmdc:f5a6c612749a76e6a4c14604707ac3a0 -INFO:root:PassingDataObject: nmdc:94e76584549ce3269937ef04bef75359 -INFO:root:PassingDataObject: nmdc:bf1fa52ab0f6aba27003d15918db5b81 -INFO:root:PassingDataObject: nmdc:8d028fa5a7e0c466b4d298b1db7c272b -INFO:root:PassingDataObject: nmdc:ba09aa2fa377e1328435b9856c3d8d81 -INFO:root:PassingDataObject: nmdc:50dffb6c9f8717a6f4b59c824e2e04d0 INFO:root:PassingDataObject: nmdc:63ccd37333942301cf401c3a13f86a20 -INFO:root:PassingDataObject: nmdc:5dd1894d518531d36a70f97823849dc6 INFO:root:PassingDataObject: nmdc:830605503e444455c0c3efef582f6bc4 INFO:root:PassingDataObject: nmdc:1bb5ee43e96bf69416adefa8b7902a38 INFO:root:PassingDataObject: nmdc:4b5abe0d30be22275ba53bab3803168e INFO:root:PassingDataObject: nmdc:feaf9d879bfab586b4051f8d7f84a0a0 +INFO:root:PassingDataObject: nmdc:94e76584549ce3269937ef04bef75359 INFO:root:PassingDataObject: nmdc:cf1088dd7eefb341bebeaf793d1e03cd +INFO:root:PassingDataObject: nmdc:8d028fa5a7e0c466b4d298b1db7c272b INFO:root:PassingDataObject: nmdc:03db808c90918e40a8152765867e54c8 +INFO:root:PassingDataObject: nmdc:b7efbb84a2073e7c127b1ed5fe389843 +INFO:root:PassingDataObject: nmdc:efc037f18c1fc10ec47d382997ded572 +INFO:root:PassingDataObject: nmdc:b4b3a8b83844a44922ef5bb9e19f3c1f +INFO:root:PassingDataObject: nmdc:50dffb6c9f8717a6f4b59c824e2e04d0 +INFO:root:PassingDataObject: nmdc:5dd1894d518531d36a70f97823849dc6 +INFO:root:PassingDataObject: nmdc:ba09aa2fa377e1328435b9856c3d8d81 +INFO:root:PassingDataObject: nmdc:f5a6c612749a76e6a4c14604707ac3a0 INFO:root:PassingDataObject: nmdc:67da006d1637db8bd8f625fcf49622ef +INFO:root:PassingDataObject: nmdc:bf1fa52ab0f6aba27003d15918db5b81 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213342 INFO:root:found 1 records INFO:root:record: nmdc:b47381d5c2685fac0cc8526b5858a0d6, MAGs Analysis Activity for nmdc:mga0x806 -INFO:root:PassingDataObject: nmdc:453599679333105d04b6fee0ae0a7549 INFO:root:PassingDataObject: nmdc:d534634b8fb94a3ae3477b1bef684944 +INFO:root:PassingDataObject: nmdc:453599679333105d04b6fee0ae0a7549 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213342 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-9b5r3122 INFO:root:legacy_id: gold:Gp0213340 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9b5r3122 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4fa30e2045705f394631c65180c5199a INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, Read QC Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:0e35f6631b3eac4b2cedc89073f9003f INFO:root:PassingDataObject: nmdc:0ddbc9424f94d92db9d78d0c00b89c49 +INFO:root:PassingDataObject: nmdc:0e35f6631b3eac4b2cedc89073f9003f INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, ReadBased Analysis Activity for nmdc:mga05m43 INFO:root:PassingDataObject: nmdc:dfe464eccd67275b1a2260b3a220a989 +INFO:root:PassingDataObject: nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 +INFO:root:PassingDataObject: nmdc:678f73fd90526668a53f9b85569ae668 INFO:root:PassingDataObject: nmdc:9b58ec241e99903bab584889485b2e6e -INFO:root:PassingDataObject: nmdc:ae7950a56988de4518d577ddd9407193 -INFO:root:PassingDataObject: nmdc:678f73fd90526668a53f9b85569ae668 INFO:root:PassingDataObject: nmdc:b502bbfab4472b9f807e42da6669ff03 INFO:root:PassingDataObject: nmdc:418fdfd8511374f352cc1874a62900ee INFO:root:PassingDataObject: nmdc:392ed4abdde861ca7b0c054ef1a84d58 -INFO:root:PassingDataObject: nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 +INFO:root:PassingDataObject: nmdc:ae7950a56988de4518d577ddd9407193 INFO:root:PassingDataObject: nmdc:17e52966db1deffee78333283d09c1e6 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, Assembly Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:f0a6e994ecf21ff02d973c3a8d015a63 -INFO:root:PassingDataObject: nmdc:77530c3056fbba7914f2d98baf3fedd0 +INFO:root:PassingDataObject: nmdc:1c3861f53217f359d22be182d2c58936 INFO:root:PassingDataObject: nmdc:ec920dd0af387efe10935cd876f90164 +INFO:root:PassingDataObject: nmdc:f0a6e994ecf21ff02d973c3a8d015a63 INFO:root:PassingDataObject: nmdc:e3a366b4c1b9c56427d411f26b766dcb -INFO:root:PassingDataObject: nmdc:1c3861f53217f359d22be182d2c58936 +INFO:root:PassingDataObject: nmdc:77530c3056fbba7914f2d98baf3fedd0 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, Annotation Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:dfb38570f7169c63285af23233600f83 -INFO:root:PassingDataObject: nmdc:e3d5f0521ed6eb53381d7e7af1cea48c -INFO:root:PassingDataObject: nmdc:03710828fe2e40eb8c03fe1f1309bfda -INFO:root:PassingDataObject: nmdc:48a6868e79b361b9606288e6d1b5c021 -INFO:root:PassingDataObject: nmdc:9b28ace001b3144605dd4d43f3202606 INFO:root:PassingDataObject: nmdc:0ea0a925d958dce862a237e5288d7b90 -INFO:root:PassingDataObject: nmdc:14efd905856ae7d7664791ede209d484 -INFO:root:PassingDataObject: nmdc:4f15f05a1f47ae8b851c731e5a89a1ac -INFO:root:PassingDataObject: nmdc:69018c93fed333e556733fb2327345fc +INFO:root:PassingDataObject: nmdc:714ca6e0877f4102cdf9bdd599992620 INFO:root:PassingDataObject: nmdc:c38a01e8026a9b4b5494b9d9980b557d INFO:root:PassingDataObject: nmdc:2d71fa79601cea4274b6c1c5a6191b20 -INFO:root:PassingDataObject: nmdc:ffb6c5546dbc4499f9e3493239df83de INFO:root:PassingDataObject: nmdc:734689f0efd146f95f20cae8767a90fd INFO:root:PassingDataObject: nmdc:becf90aefa0db5cccce9ac4e99c3f730 -INFO:root:PassingDataObject: nmdc:09def1cec17d548fb5aa361e9907b2dc -INFO:root:PassingDataObject: nmdc:714ca6e0877f4102cdf9bdd599992620 INFO:root:PassingDataObject: nmdc:335846b6688de171ec26c49e0b83d82c -INFO:root:PassingDataObject: nmdc:9ba1775c290b30139d134d32a7b7520b +INFO:root:PassingDataObject: nmdc:69018c93fed333e556733fb2327345fc +INFO:root:PassingDataObject: nmdc:4f15f05a1f47ae8b851c731e5a89a1ac +INFO:root:PassingDataObject: nmdc:03710828fe2e40eb8c03fe1f1309bfda +INFO:root:PassingDataObject: nmdc:e3d5f0521ed6eb53381d7e7af1cea48c +INFO:root:PassingDataObject: nmdc:ffb6c5546dbc4499f9e3493239df83de +INFO:root:PassingDataObject: nmdc:09def1cec17d548fb5aa361e9907b2dc +INFO:root:PassingDataObject: nmdc:dfb38570f7169c63285af23233600f83 +INFO:root:PassingDataObject: nmdc:9b28ace001b3144605dd4d43f3202606 +INFO:root:PassingDataObject: nmdc:14efd905856ae7d7664791ede209d484 +INFO:root:PassingDataObject: nmdc:48a6868e79b361b9606288e6d1b5c021 INFO:root:PassingDataObject: nmdc:a037493323442149832334d8265b54b1 +INFO:root:PassingDataObject: nmdc:9ba1775c290b30139d134d32a7b7520b INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213340 INFO:root:found 1 records INFO:root:record: nmdc:c07a3e390051a54c02dfe7dd7ffaee45, MAGs Analysis Activity for nmdc:mga05m43 -INFO:root:PassingDataObject: nmdc:2f1d2ee7349525142f01c694710353c7 INFO:root:PassingDataObject: nmdc:54cab8776df993ab9ac3c97bec28bfd8 +INFO:root:PassingDataObject: nmdc:2f1d2ee7349525142f01c694710353c7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213340 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-6evhzd33 INFO:root:legacy_id: gold:Gp0213341 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-6evhzd33 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:61a97e80cb6d26e90f140f38b008abab INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, Read QC Activity for nmdc:mga00j44 INFO:root:PassingDataObject: nmdc:584ae19217e4fea72e00f14576638a52 INFO:root:PassingDataObject: nmdc:cd44cfc945ffc20d8db0099c619f6644 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, ReadBased Analysis Activity for nmdc:mga00j44 +INFO:root:PassingDataObject: nmdc:568a5dc85e94b6f90d3811f5cf953592 +INFO:root:PassingDataObject: nmdc:1381039de3a60dc7ab5ad30679eec98e +INFO:root:PassingDataObject: nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc +INFO:root:PassingDataObject: nmdc:27d4ee97741634f477cb80fe90502cb1 INFO:root:PassingDataObject: nmdc:46f4d0431ee1c17a9fa63a699190d48a INFO:root:PassingDataObject: nmdc:5cfab3386ea0289c12df7adf724aedb2 INFO:root:PassingDataObject: nmdc:078eaa687d5fb03268c8d075ea0fc698 -INFO:root:PassingDataObject: nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc -INFO:root:PassingDataObject: nmdc:c0f5be7b98b9076e8a7472d3a591250b -INFO:root:PassingDataObject: nmdc:568a5dc85e94b6f90d3811f5cf953592 -INFO:root:PassingDataObject: nmdc:27d4ee97741634f477cb80fe90502cb1 INFO:root:PassingDataObject: nmdc:8751a56c3673edf134302b976d160b76 -INFO:root:PassingDataObject: nmdc:1381039de3a60dc7ab5ad30679eec98e +INFO:root:PassingDataObject: nmdc:c0f5be7b98b9076e8a7472d3a591250b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, Assembly Activity for nmdc:mga00j44 -INFO:root:PassingDataObject: nmdc:abc6615b11cef93b8d3ec01850d0969f -INFO:root:PassingDataObject: nmdc:1676817d11fb0a8a2253b3ad8c349efb INFO:root:PassingDataObject: nmdc:7fbe406ab0837d507ceec7f5eb023be4 +INFO:root:PassingDataObject: nmdc:1676817d11fb0a8a2253b3ad8c349efb INFO:root:PassingDataObject: nmdc:bcc861fad2312fe5cf8af409cb9b899b +INFO:root:PassingDataObject: nmdc:abc6615b11cef93b8d3ec01850d0969f INFO:root:PassingDataObject: nmdc:2716879930e592b68f9b8c743955c594 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, Annotation Activity for nmdc:mga00j44 -INFO:root:PassingDataObject: nmdc:f9b5c4c85094392ac15ebef85536ddb7 -INFO:root:PassingDataObject: nmdc:5874487f101c0626d9e3b9eef97f8b4f -INFO:root:PassingDataObject: nmdc:a3e34e995b1591ed8675bfdeffa136cb INFO:root:PassingDataObject: nmdc:69913f2262b1a71eecfa567aa88f0d1e -INFO:root:PassingDataObject: nmdc:71223c6b05b997c910ab9d9ee43a108e +INFO:root:PassingDataObject: nmdc:66e23166a2854620aa76ac1044342927 +INFO:root:PassingDataObject: nmdc:a3a40f52611ea96b332a6f4c8131dc77 +INFO:root:PassingDataObject: nmdc:5cba6531acd3b3afb997cca5bed23e60 INFO:root:PassingDataObject: nmdc:1b2405d515a530d9d1f842d0a5cf6a96 INFO:root:PassingDataObject: nmdc:f092e4331eb96881920f6ea40d2b73bb -INFO:root:PassingDataObject: nmdc:edbe158b070903c0769a5a404b4b1e2c -INFO:root:PassingDataObject: nmdc:c6d2d201b4c031bf740da514c7359530 -INFO:root:PassingDataObject: nmdc:66e23166a2854620aa76ac1044342927 +INFO:root:PassingDataObject: nmdc:43878732be1f388246bef815cfac757c +INFO:root:PassingDataObject: nmdc:f9b5c4c85094392ac15ebef85536ddb7 INFO:root:PassingDataObject: nmdc:91dc16794059c3bacecd4e266e3ed75f +INFO:root:PassingDataObject: nmdc:a3e34e995b1591ed8675bfdeffa136cb +INFO:root:PassingDataObject: nmdc:5874487f101c0626d9e3b9eef97f8b4f +INFO:root:PassingDataObject: nmdc:a0323cf3827a631de9b9fc94a55fb8cb INFO:root:PassingDataObject: nmdc:970885bd299cf41938e0e45812393c92 +INFO:root:PassingDataObject: nmdc:c6d2d201b4c031bf740da514c7359530 +INFO:root:PassingDataObject: nmdc:13f9a289b51b36015e934848ee1af6c1 +INFO:root:PassingDataObject: nmdc:edbe158b070903c0769a5a404b4b1e2c +INFO:root:PassingDataObject: nmdc:71223c6b05b997c910ab9d9ee43a108e INFO:root:PassingDataObject: nmdc:faa2567e321af1e65a359432ef504f8a -INFO:root:PassingDataObject: nmdc:43878732be1f388246bef815cfac757c -INFO:root:PassingDataObject: nmdc:5cba6531acd3b3afb997cca5bed23e60 INFO:root:PassingDataObject: nmdc:505b3fd80c965d0db64d70719243154e -INFO:root:PassingDataObject: nmdc:a3a40f52611ea96b332a6f4c8131dc77 -INFO:root:PassingDataObject: nmdc:13f9a289b51b36015e934848ee1af6c1 -INFO:root:PassingDataObject: nmdc:a0323cf3827a631de9b9fc94a55fb8cb INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213341 INFO:root:found 1 records INFO:root:record: nmdc:d618ccb3b86ea1a779d6ebba290d84c5, MAGs Analysis Activity for nmdc:mga00j44 INFO:root:PassingDataObject: nmdc:08b1d4418b68ece973a9b8d904118b35 INFO:root:PassingDataObject: nmdc:9e06bee2897976eaf3f5f80161a20ee7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213341 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-1h7pv713 INFO:root:legacy_id: gold:Gp0213338 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-1h7pv713 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6e84b6d72daf43591617f4c278a8540f INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, Read QC Activity for nmdc:mga08009 -INFO:root:PassingDataObject: nmdc:483f7e6992e20f5a1a09a92d17f7cea4 INFO:root:PassingDataObject: nmdc:0e567de41f3253cae20169aa6faa5cac +INFO:root:PassingDataObject: nmdc:483f7e6992e20f5a1a09a92d17f7cea4 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, ReadBased Analysis Activity for nmdc:mga08009 INFO:root:PassingDataObject: nmdc:25c22f7a2e3c7594fd619e68c21bbf7b -INFO:root:PassingDataObject: nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 -INFO:root:PassingDataObject: nmdc:d8c409788042d02d9eaac0dabdfc82ef INFO:root:PassingDataObject: nmdc:8a2a5d0c8a30aeb106361a08fa17db00 +INFO:root:PassingDataObject: nmdc:d8c409788042d02d9eaac0dabdfc82ef +INFO:root:PassingDataObject: nmdc:8daa4e616f01adecebfec90bc9130985 INFO:root:PassingDataObject: nmdc:84e2bf02fb5e6ee6d02eac4406ea02db INFO:root:PassingDataObject: nmdc:41efc00020b49913588cbde1f6c9d701 INFO:root:PassingDataObject: nmdc:156e32e85e85365894929bd421fe30f6 INFO:root:PassingDataObject: nmdc:209438a5ee7b712c9f167c42ac9dea49 -INFO:root:PassingDataObject: nmdc:8daa4e616f01adecebfec90bc9130985 +INFO:root:PassingDataObject: nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, Assembly Activity for nmdc:mga08009 INFO:root:PassingDataObject: nmdc:82de6e9679c7d42e0ac1f58e06630d54 +INFO:root:PassingDataObject: nmdc:acdc8bced0d11f98aaeb11a5cbd22436 +INFO:root:PassingDataObject: nmdc:9c91f602e45ac73701126b5f1ecae321 INFO:root:PassingDataObject: nmdc:4a55d13b3dbf537c5709941bb501307e INFO:root:PassingDataObject: nmdc:32902caf35a43f22b5bf2faace9b945e -INFO:root:PassingDataObject: nmdc:9c91f602e45ac73701126b5f1ecae321 -INFO:root:PassingDataObject: nmdc:acdc8bced0d11f98aaeb11a5cbd22436 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, Annotation Activity for nmdc:mga08009 -INFO:root:PassingDataObject: nmdc:cfe10e4da0b8e37a0c89238f76e15b13 -INFO:root:PassingDataObject: nmdc:bb9500da1f8a446a5799a55a86a16892 -INFO:root:PassingDataObject: nmdc:7a27a876b2ea7ba1e7c64ac9bc19a984 +INFO:root:PassingDataObject: nmdc:536c17664c1a45cd6086525028826cf7 INFO:root:PassingDataObject: nmdc:514f21f74b94bd36a18396b244e00139 -INFO:root:PassingDataObject: nmdc:a1302d4a083adaad041ab29594b68acd -INFO:root:PassingDataObject: nmdc:593fae969a7e77abf1683291f5d792ad -INFO:root:PassingDataObject: nmdc:8f86bf253e2ff2feab4b54db8173300b -INFO:root:PassingDataObject: nmdc:25f7c37e51fd7c2bdd30350d67e1de22 -INFO:root:PassingDataObject: nmdc:f3b9dd8a591e635117d60e8356afccac INFO:root:PassingDataObject: nmdc:dc3910c447f6d208086204d31bdb9401 +INFO:root:PassingDataObject: nmdc:f3b9dd8a591e635117d60e8356afccac +INFO:root:PassingDataObject: nmdc:ac5ac14ab247bafb39400a32336c91bc +INFO:root:PassingDataObject: nmdc:8f86bf253e2ff2feab4b54db8173300b INFO:root:PassingDataObject: nmdc:dbce3ab36b3d755023a083854828eca1 -INFO:root:PassingDataObject: nmdc:536c17664c1a45cd6086525028826cf7 INFO:root:PassingDataObject: nmdc:0e92cd09969bca7ac9c3d75b1d146f1d -INFO:root:PassingDataObject: nmdc:f1bb07a73b66679b752661d67752e354 -INFO:root:PassingDataObject: nmdc:a53f24a100986f060f2efef6b4a1045a -INFO:root:PassingDataObject: nmdc:ac5ac14ab247bafb39400a32336c91bc +INFO:root:PassingDataObject: nmdc:593fae969a7e77abf1683291f5d792ad +INFO:root:PassingDataObject: nmdc:7a27a876b2ea7ba1e7c64ac9bc19a984 +INFO:root:PassingDataObject: nmdc:cfe10e4da0b8e37a0c89238f76e15b13 INFO:root:PassingDataObject: nmdc:a98f11553110997244111b88062974dc -INFO:root:PassingDataObject: nmdc:ae8a827a866c1338eba610ae6751a174 +INFO:root:PassingDataObject: nmdc:a1302d4a083adaad041ab29594b68acd +INFO:root:PassingDataObject: nmdc:25f7c37e51fd7c2bdd30350d67e1de22 +INFO:root:PassingDataObject: nmdc:f1bb07a73b66679b752661d67752e354 +INFO:root:PassingDataObject: nmdc:bb9500da1f8a446a5799a55a86a16892 INFO:root:PassingDataObject: nmdc:62babb9123429fa0f87a9ee75e93ed06 +INFO:root:PassingDataObject: nmdc:ae8a827a866c1338eba610ae6751a174 +INFO:root:PassingDataObject: nmdc:a53f24a100986f060f2efef6b4a1045a INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213338 INFO:root:found 1 records INFO:root:record: nmdc:3be418a84679c9b906d0ae0e3fb2fde1, MAGs Analysis Activity for nmdc:mga08009 INFO:root:PassingDataObject: nmdc:f8c80a12ef32da13f515b806fc28046b INFO:root:PassingDataObject: nmdc:b31752abb3c017e572adaf70784704d2 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213338 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-1xy9v450 INFO:root:legacy_id: gold:Gp0213346 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-1xy9v450 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7f0c6c7be34ce22ab91df9a75f3e4379 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, Read QC Activity for nmdc:mga0ma88 -INFO:root:PassingDataObject: nmdc:d199598f6ccfbe4194abf10379ce66a1 INFO:root:PassingDataObject: nmdc:cd59a03d1936c277c41633374a0cf06d +INFO:root:PassingDataObject: nmdc:d199598f6ccfbe4194abf10379ce66a1 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, ReadBased Analysis Activity for nmdc:mga0ma88 -INFO:root:PassingDataObject: nmdc:b68a50fcbb28e49af30ad5094f1621c1 -INFO:root:PassingDataObject: nmdc:3949585d6a27e0e4a58770c563674912 -INFO:root:PassingDataObject: nmdc:f18eed5d4249afa49805e301110be150 -INFO:root:PassingDataObject: nmdc:e5abd608f71f5b1ab7c57679c58b564e -INFO:root:PassingDataObject: nmdc:7cc9f39ac328dba5930d0c2c31d869c7 -INFO:root:PassingDataObject: nmdc:36db98ccafccefe424de6a9eaca9baa8 INFO:root:PassingDataObject: nmdc:832c6e017ce77e8dfa710ad1d65b6c03 INFO:root:PassingDataObject: nmdc:fd403a1c7ab421feeca3d5858b9bc4ab +INFO:root:PassingDataObject: nmdc:f18eed5d4249afa49805e301110be150 INFO:root:PassingDataObject: nmdc:838feed210e675f80ea726f5c0a89927 +INFO:root:PassingDataObject: nmdc:36db98ccafccefe424de6a9eaca9baa8 +INFO:root:PassingDataObject: nmdc:7cc9f39ac328dba5930d0c2c31d869c7 +INFO:root:PassingDataObject: nmdc:e5abd608f71f5b1ab7c57679c58b564e +INFO:root:PassingDataObject: nmdc:b68a50fcbb28e49af30ad5094f1621c1 +INFO:root:PassingDataObject: nmdc:3949585d6a27e0e4a58770c563674912 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, Assembly Activity for nmdc:mga0ma88 -INFO:root:PassingDataObject: nmdc:e3f2d85d7569163784320b7d12f9ccc2 -INFO:root:PassingDataObject: nmdc:f91be7d590df595c0a752a020fca3e7e INFO:root:PassingDataObject: nmdc:7522a920a9afa2cb73f32515b31deca1 INFO:root:PassingDataObject: nmdc:da69f52f5804b6ecff8da97142240f2f +INFO:root:PassingDataObject: nmdc:e3f2d85d7569163784320b7d12f9ccc2 +INFO:root:PassingDataObject: nmdc:f91be7d590df595c0a752a020fca3e7e INFO:root:PassingDataObject: nmdc:1c69f65e09e27905cc8d3c31f063543b INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, Annotation Activity for nmdc:mga0ma88 -INFO:root:PassingDataObject: nmdc:a872a3d8add4479ac4bdd393b0c4f160 -INFO:root:PassingDataObject: nmdc:ff8414d8f2c3c0bb31e591e4771dd0e4 +INFO:root:PassingDataObject: nmdc:f6b2b6852e2ea68756993a15482fb88e +INFO:root:PassingDataObject: nmdc:5dda91903813f796591d86b0354eb3a6 +INFO:root:PassingDataObject: nmdc:f6a13e8a903ff33cf7ed18fda508fa31 +INFO:root:PassingDataObject: nmdc:751be9da214c2bd6428da593c10fbf54 INFO:root:PassingDataObject: nmdc:8f24a7bca9979b7309f42321027b24a1 +INFO:root:PassingDataObject: nmdc:a872a3d8add4479ac4bdd393b0c4f160 +INFO:root:PassingDataObject: nmdc:e550da5bff482f714fa24170b6e3cf4c +INFO:root:PassingDataObject: nmdc:2a361f125dde65a02659685466588cb9 +INFO:root:PassingDataObject: nmdc:f5c9922ecbe462b412cf680897c0553d +INFO:root:PassingDataObject: nmdc:3442bf51152602bda76ebe61912a7400 INFO:root:PassingDataObject: nmdc:b4a8d4b6fd3b2fab6ff95abddb2e93de -INFO:root:PassingDataObject: nmdc:f6a13e8a903ff33cf7ed18fda508fa31 INFO:root:PassingDataObject: nmdc:d7a3e85057baa5b324a34912aa2f052d INFO:root:PassingDataObject: nmdc:a0baa253958eb40aae088012691bd1f6 -INFO:root:PassingDataObject: nmdc:28c57c02d87921e249170a64d383b710 -INFO:root:PassingDataObject: nmdc:aa4d2c6e759ff8e0c2dff28dd9734bf7 -INFO:root:PassingDataObject: nmdc:2a361f125dde65a02659685466588cb9 +INFO:root:PassingDataObject: nmdc:ff8414d8f2c3c0bb31e591e4771dd0e4 INFO:root:PassingDataObject: nmdc:2c2eca0d45f18273c34406ec0e7fd090 -INFO:root:PassingDataObject: nmdc:f6b2b6852e2ea68756993a15482fb88e -INFO:root:PassingDataObject: nmdc:e550da5bff482f714fa24170b6e3cf4c -INFO:root:PassingDataObject: nmdc:751be9da214c2bd6428da593c10fbf54 -INFO:root:PassingDataObject: nmdc:f5c9922ecbe462b412cf680897c0553d -INFO:root:PassingDataObject: nmdc:3442bf51152602bda76ebe61912a7400 INFO:root:PassingDataObject: nmdc:15fae9ee5e168c473e573c0f09bb68df +INFO:root:PassingDataObject: nmdc:28c57c02d87921e249170a64d383b710 +INFO:root:PassingDataObject: nmdc:aa4d2c6e759ff8e0c2dff28dd9734bf7 INFO:root:PassingDataObject: nmdc:f3a5b69b57a90b68ca074219b7d51ff9 -INFO:root:PassingDataObject: nmdc:5dda91903813f796591d86b0354eb3a6 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213346 INFO:root:found 1 records INFO:root:record: nmdc:9822da1d2cddb75b48db56ce5c03feaf, MAGs Analysis Activity for nmdc:mga0ma88 INFO:root:PassingDataObject: nmdc:b508db66c2475de50b29fd4cf50d053f INFO:root:PassingDataObject: nmdc:24893f35076024112c59e0ece01db84b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213346 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-hmqcq810 INFO:root:legacy_id: gold:Gp0213343 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-hmqcq810 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:5e84dfde0d632897ed93abf84fd75dbd INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, Read QC Activity for nmdc:mga00h47 INFO:root:PassingDataObject: nmdc:34fdc5db1d8e2cd22678cfba63187ebb INFO:root:PassingDataObject: nmdc:7ef54b43368bb21e4bafe6512b693760 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, ReadBased Analysis Activity for nmdc:mga00h47 -INFO:root:PassingDataObject: nmdc:812af0a1cf69a1241225e79a056099e3 INFO:root:PassingDataObject: nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 -INFO:root:PassingDataObject: nmdc:c31bb7727915abb60531b5f1d6ebe078 -INFO:root:PassingDataObject: nmdc:5e4bc9e2005f6c6e74c8414edea24420 INFO:root:PassingDataObject: nmdc:90b469897a00f34db51efab16f076189 +INFO:root:PassingDataObject: nmdc:c31bb7727915abb60531b5f1d6ebe078 +INFO:root:PassingDataObject: nmdc:4e01d9eff79cc154c9f4020eaf5d2264 INFO:root:PassingDataObject: nmdc:798a9e4ea0aeaf42662474256caa2933 +INFO:root:PassingDataObject: nmdc:812af0a1cf69a1241225e79a056099e3 +INFO:root:PassingDataObject: nmdc:5e4bc9e2005f6c6e74c8414edea24420 INFO:root:PassingDataObject: nmdc:0bd7f6549ae98f5ee74ee57b77018ccd -INFO:root:PassingDataObject: nmdc:4e01d9eff79cc154c9f4020eaf5d2264 INFO:root:PassingDataObject: nmdc:e47c2276096e22b1b5b38f3fa1aff710 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, Assembly Activity for nmdc:mga00h47 +INFO:root:PassingDataObject: nmdc:92bb0f88e88ae860971924a6006f7ee6 INFO:root:PassingDataObject: nmdc:c435f75c7f44178a2b2a341694910fbe +INFO:root:PassingDataObject: nmdc:200239924baef39c49577b0eeda7563a INFO:root:PassingDataObject: nmdc:37662dfa44f2cf6eea410f8e7d5c3359 -INFO:root:PassingDataObject: nmdc:92bb0f88e88ae860971924a6006f7ee6 INFO:root:PassingDataObject: nmdc:a9eede9b748f6b22bb4657ef954652ea -INFO:root:PassingDataObject: nmdc:200239924baef39c49577b0eeda7563a INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, Annotation Activity for nmdc:mga00h47 -INFO:root:PassingDataObject: nmdc:4220261037cbc503f9ba1178ab559851 -INFO:root:PassingDataObject: nmdc:bafd87dd67b4572808d68b581612c561 +INFO:root:PassingDataObject: nmdc:266a81db6f3fa700b5b59984cf619157 +INFO:root:PassingDataObject: nmdc:4fe58a6cb68015b2032828eb073297bb INFO:root:PassingDataObject: nmdc:b7d0444e5e33f387010fa5124f9d3267 -INFO:root:PassingDataObject: nmdc:39b42aa9d6ba477ea19ff9451d71671e -INFO:root:PassingDataObject: nmdc:71dd24450339bb718f5f537887a42f60 -INFO:root:PassingDataObject: nmdc:5a894f6f6b745e9b37b04c256abf6d23 -INFO:root:PassingDataObject: nmdc:2fa6b5aa2f29b9df9779cf78d00ff0f0 INFO:root:PassingDataObject: nmdc:6d788fa570962f32cd9ad19399f23695 INFO:root:PassingDataObject: nmdc:a009722f196801c02b8e7b317db93c4d -INFO:root:PassingDataObject: nmdc:4fe58a6cb68015b2032828eb073297bb -INFO:root:PassingDataObject: nmdc:0ce4105bc341a2ccd2be9767a8ab5bea +INFO:root:PassingDataObject: nmdc:5a894f6f6b745e9b37b04c256abf6d23 INFO:root:PassingDataObject: nmdc:f02b430f4ecda7b7d84762f215b15eaf -INFO:root:PassingDataObject: nmdc:d6958f78e9ded16f76bba2b84b04b645 -INFO:root:PassingDataObject: nmdc:870b8c90759c93c66a128551d3f5245e -INFO:root:PassingDataObject: nmdc:e5c5ee95721e739f888c8c5f8d359bdd -INFO:root:PassingDataObject: nmdc:266a81db6f3fa700b5b59984cf619157 +INFO:root:PassingDataObject: nmdc:39b42aa9d6ba477ea19ff9451d71671e +INFO:root:PassingDataObject: nmdc:2fa6b5aa2f29b9df9779cf78d00ff0f0 INFO:root:PassingDataObject: nmdc:4c0289c73638e86f03b8f6d8c238a887 +INFO:root:PassingDataObject: nmdc:bafd87dd67b4572808d68b581612c561 +INFO:root:PassingDataObject: nmdc:870b8c90759c93c66a128551d3f5245e +INFO:root:PassingDataObject: nmdc:71dd24450339bb718f5f537887a42f60 +INFO:root:PassingDataObject: nmdc:4220261037cbc503f9ba1178ab559851 +INFO:root:PassingDataObject: nmdc:d6958f78e9ded16f76bba2b84b04b645 +INFO:root:PassingDataObject: nmdc:0ce4105bc341a2ccd2be9767a8ab5bea INFO:root:PassingDataObject: nmdc:f515a69c1ecb7d87e1332372a24bb905 +INFO:root:PassingDataObject: nmdc:e5c5ee95721e739f888c8c5f8d359bdd INFO:root:PassingDataObject: nmdc:b503a59da2e4d9a32346843b998af723 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213343 INFO:root:found 1 records INFO:root:record: nmdc:287f0b50acf7f7fa1cd1038391a2a2cc, MAGs Analysis Activity for nmdc:mga00h47 -INFO:root:PassingDataObject: nmdc:3fb4712a1bbcb905fab4005bbf3bf03f INFO:root:PassingDataObject: nmdc:ead5305e309f5fe59114f83b18269628 +INFO:root:PassingDataObject: nmdc:3fb4712a1bbcb905fab4005bbf3bf03f INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213343 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-1a2d4549 INFO:root:legacy_id: gold:Gp0213344 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-1a2d4549 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2f05dd5770ff3ebe3b56f008854bac78 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, Read QC Activity for nmdc:mga0af63 INFO:root:PassingDataObject: nmdc:aecbb2d36dffa69932bc7cee73b736dd INFO:root:PassingDataObject: nmdc:cbc8fa5c109892ae9f37600c2b65094e INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, ReadBased Analysis Activity for nmdc:mga0af63 +INFO:root:PassingDataObject: nmdc:1468a245ca107e50d13a8d0e4c27873b +INFO:root:PassingDataObject: nmdc:8d8b90d287099ef930cb6dfeba99d139 INFO:root:PassingDataObject: nmdc:3d500fe8a69a9c8f0ff0146fa7cb3eb3 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 -ERROR:root:FailedDataObject: nmdc:8d8b90d287099ef930cb6dfeba99d139, -ERROR:root:FailedDataObject: nmdc:c800a33e5b7cd800bced9c60bcaecf60, -ERROR:root:FailedDataObject: nmdc:c05680de421aa177499f29588804100f, -ERROR:root:FailedDataObject: nmdc:5a7c3677e5b3c64144a89bf1e2ed6a21, +INFO:root:PassingDataObject: nmdc:9ebb73c3378e1e19f3aaa4c6ad67bd6a +INFO:root:PassingDataObject: nmdc:c800a33e5b7cd800bced9c60bcaecf60 +INFO:root:PassingDataObject: nmdc:5a7c3677e5b3c64144a89bf1e2ed6a21 +INFO:root:PassingDataObject: nmdc:c05680de421aa177499f29588804100f ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 -ERROR:root:FailedDataObject: nmdc:9ebb73c3378e1e19f3aaa4c6ad67bd6a, -ERROR:root:FailedDataObject: nmdc:1468a245ca107e50d13a8d0e4c27873b, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, ReadBased Analysis Activity for nmdc:mga0af63 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, Assembly Activity for nmdc:mga0af63 -INFO:root:PassingDataObject: nmdc:8a11794842326ebb25fc702b5862395b -INFO:root:PassingDataObject: nmdc:545ac8cf12280a833c30b9de5171c9de INFO:root:PassingDataObject: nmdc:be1f0af45c3e6d5f8eec727320987b95 -INFO:root:PassingDataObject: nmdc:f55760dd8a7d7701ffb33e6b89cd0210 INFO:root:PassingDataObject: nmdc:ed641164309b15152dc25fbff08ec3e7 +INFO:root:PassingDataObject: nmdc:8a11794842326ebb25fc702b5862395b +INFO:root:PassingDataObject: nmdc:f55760dd8a7d7701ffb33e6b89cd0210 +INFO:root:PassingDataObject: nmdc:545ac8cf12280a833c30b9de5171c9de INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, Annotation Activity for nmdc:mga0af63 -INFO:root:PassingDataObject: nmdc:4696b9e27bedf3d851c99a148c458a6d -INFO:root:PassingDataObject: nmdc:b3a9efdad3f7b3cc4f1e94db7cbac42b -INFO:root:PassingDataObject: nmdc:d096d406fe785acde69a72e9dbb8a049 -INFO:root:PassingDataObject: nmdc:03b306cd194144f6f0228ad611c62fb4 +INFO:root:PassingDataObject: nmdc:c21bedf7af864c3788890730d357c37f INFO:root:PassingDataObject: nmdc:c5ebee15af85d376bd82e94130291c9e -INFO:root:PassingDataObject: nmdc:5a12441f0a84ca5f3642b080b324acc5 -INFO:root:PassingDataObject: nmdc:b4a74be02d38947a83db8fe66b83e9ff -INFO:root:PassingDataObject: nmdc:f4f54d144557bf69faca070ea249da01 -INFO:root:PassingDataObject: nmdc:7f7d244793be54de347515752f0fe6e4 INFO:root:PassingDataObject: nmdc:d83dac7dec831e494340e6cca8d8459b INFO:root:PassingDataObject: nmdc:c177f3673278f0692e96f0f07f79b288 INFO:root:PassingDataObject: nmdc:a8b5b2ec2957b68fd46c1fbf1d81deb8 INFO:root:PassingDataObject: nmdc:9b661d182fea51ca1e1c0f487117b967 +INFO:root:PassingDataObject: nmdc:b6c9bbe9fe12289730ce7c922430e51f INFO:root:PassingDataObject: nmdc:7b27243f23143ba91caee06d77c09894 +INFO:root:PassingDataObject: nmdc:f4f54d144557bf69faca070ea249da01 +INFO:root:PassingDataObject: nmdc:03b306cd194144f6f0228ad611c62fb4 INFO:root:PassingDataObject: nmdc:acb7ca437f527f807b5fce0364b62e50 -INFO:root:PassingDataObject: nmdc:bacc77027d87fdafaf64d68ef813e89f +INFO:root:PassingDataObject: nmdc:5a12441f0a84ca5f3642b080b324acc5 +INFO:root:PassingDataObject: nmdc:7f7d244793be54de347515752f0fe6e4 INFO:root:PassingDataObject: nmdc:b36dad77310cf892873049f720c010ed -INFO:root:PassingDataObject: nmdc:b6c9bbe9fe12289730ce7c922430e51f -INFO:root:PassingDataObject: nmdc:c21bedf7af864c3788890730d357c37f +INFO:root:PassingDataObject: nmdc:bacc77027d87fdafaf64d68ef813e89f +INFO:root:PassingDataObject: nmdc:d096d406fe785acde69a72e9dbb8a049 +INFO:root:PassingDataObject: nmdc:b4a74be02d38947a83db8fe66b83e9ff +INFO:root:PassingDataObject: nmdc:b3a9efdad3f7b3cc4f1e94db7cbac42b +INFO:root:PassingDataObject: nmdc:4696b9e27bedf3d851c99a148c458a6d INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213344 INFO:root:found 1 records INFO:root:record: nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2, MAGs Analysis Activity for nmdc:mga0af63 INFO:root:PassingDataObject: nmdc:8d176d11b714afc1c96987c55620b899 INFO:root:PassingDataObject: nmdc:932b6d02b0508980b8c22ff85b485aca INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213344 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-5fgefy28 INFO:root:legacy_id: gold:Gp0213347 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-5fgefy28 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f9f1ddf2e1eca8e9c8a18b5096433c54 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, Read QC Activity for nmdc:mga05491 INFO:root:PassingDataObject: nmdc:8fc52f9de8c540cc0edac30c0f81dc61 INFO:root:PassingDataObject: nmdc:5a867d66faabc1e340c31bb9c882127c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, ReadBased Analysis Activity for nmdc:mga05491 -INFO:root:PassingDataObject: nmdc:cd58622718f0251e0cb9f3736ca3ec90 +INFO:root:PassingDataObject: nmdc:3bee4b758e80e4e4d8829bebf0618b13 INFO:root:PassingDataObject: nmdc:41541759a6d5f17b651f851dc9b6192a -INFO:root:PassingDataObject: nmdc:82fe4e5311a521d5271e11cfec7e944e INFO:root:PassingDataObject: nmdc:c523105f854b6ebdb0b90d69e331f3c4 -INFO:root:PassingDataObject: nmdc:06cbbccb88f0f4f2c5ed159061c5c65d -INFO:root:PassingDataObject: nmdc:3bee4b758e80e4e4d8829bebf0618b13 -INFO:root:PassingDataObject: nmdc:ea9e507877edf55b3534beff2f8ce84f INFO:root:PassingDataObject: nmdc:06407789c5f04cfe027601a08b26e2d1 +INFO:root:PassingDataObject: nmdc:cd58622718f0251e0cb9f3736ca3ec90 +INFO:root:PassingDataObject: nmdc:06cbbccb88f0f4f2c5ed159061c5c65d INFO:root:PassingDataObject: nmdc:24b21fa9194d3821932ea688976f1cdc +INFO:root:PassingDataObject: nmdc:82fe4e5311a521d5271e11cfec7e944e +INFO:root:PassingDataObject: nmdc:ea9e507877edf55b3534beff2f8ce84f INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, Assembly Activity for nmdc:mga05491 INFO:root:PassingDataObject: nmdc:8d5bd20077c9f68e5434d4eb145b5235 +INFO:root:PassingDataObject: nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 INFO:root:PassingDataObject: nmdc:c1c52c10f78dd6ad514095c836994704 INFO:root:PassingDataObject: nmdc:367c3d138dbf10c772b48853b08bda60 INFO:root:PassingDataObject: nmdc:6a9b318266bbf9747202ee6b19d163c5 -INFO:root:PassingDataObject: nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, Annotation Activity for nmdc:mga05491 -INFO:root:PassingDataObject: nmdc:1c2686170f4b3572ce7b643a17f9c748 -INFO:root:PassingDataObject: nmdc:d8da110a04f81f60a19cbb112fc29532 -INFO:root:PassingDataObject: nmdc:a66a567df7054a1682f19ffbd46e80f4 -INFO:root:PassingDataObject: nmdc:a688b4a9ecf998ce9da4abe816bac47a +INFO:root:PassingDataObject: nmdc:f17371ab01888c8cdc6001d76244ab4d +INFO:root:PassingDataObject: nmdc:297ee366f81b21488cf0f89fb5fda905 +INFO:root:PassingDataObject: nmdc:4661a4d9ccbacae49c588902f41f010c +INFO:root:PassingDataObject: nmdc:7faa73c98c45b6f173ad33c48fe84890 INFO:root:PassingDataObject: nmdc:60c6f6c19e71620442b49947d8bcd4ac INFO:root:PassingDataObject: nmdc:b718b8805796c0fe8c0cee6e1de86e12 -INFO:root:PassingDataObject: nmdc:f98fea47b9125f3673152b245bf88980 -INFO:root:PassingDataObject: nmdc:7faa73c98c45b6f173ad33c48fe84890 +INFO:root:PassingDataObject: nmdc:dcdf93d0eeca2df3f94cc7b043011a23 INFO:root:PassingDataObject: nmdc:7e30e73338b75d6b5124d3c92585b7ae -INFO:root:PassingDataObject: nmdc:b15d266d0c63f6eefffe775fe5f1dc80 -INFO:root:PassingDataObject: nmdc:297ee366f81b21488cf0f89fb5fda905 -INFO:root:PassingDataObject: nmdc:4661a4d9ccbacae49c588902f41f010c -INFO:root:PassingDataObject: nmdc:c398d4e656322c5d16cd055f458b38bd -INFO:root:PassingDataObject: nmdc:3aa866d7cfc4d9e59c47b9e458cbc9ed +INFO:root:PassingDataObject: nmdc:a66a567df7054a1682f19ffbd46e80f4 +INFO:root:PassingDataObject: nmdc:f98fea47b9125f3673152b245bf88980 +INFO:root:PassingDataObject: nmdc:bb23bf2cd7d3cac93c393038ac2769ba +INFO:root:PassingDataObject: nmdc:d8da110a04f81f60a19cbb112fc29532 INFO:root:PassingDataObject: nmdc:0bbd846eb025a9dec11fac75ce1ec664 +INFO:root:PassingDataObject: nmdc:c398d4e656322c5d16cd055f458b38bd +INFO:root:PassingDataObject: nmdc:1c2686170f4b3572ce7b643a17f9c748 INFO:root:PassingDataObject: nmdc:4fa28621f01a913cdd5361dccb15c556 -INFO:root:PassingDataObject: nmdc:bb23bf2cd7d3cac93c393038ac2769ba -INFO:root:PassingDataObject: nmdc:f17371ab01888c8cdc6001d76244ab4d -INFO:root:PassingDataObject: nmdc:dcdf93d0eeca2df3f94cc7b043011a23 +INFO:root:PassingDataObject: nmdc:a688b4a9ecf998ce9da4abe816bac47a +INFO:root:PassingDataObject: nmdc:b15d266d0c63f6eefffe775fe5f1dc80 +INFO:root:PassingDataObject: nmdc:3aa866d7cfc4d9e59c47b9e458cbc9ed INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213347 INFO:root:found 1 records INFO:root:record: nmdc:c3c454c071a5841c0a0c029358ba713c, MAGs Analysis Activity for nmdc:mga05491 -INFO:root:PassingDataObject: nmdc:3722d7c2d6d9c1dc8fca675606864570 INFO:root:PassingDataObject: nmdc:c15d6e00b87729eb7211dfbbd219d9e3 +INFO:root:PassingDataObject: nmdc:3722d7c2d6d9c1dc8fca675606864570 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213347 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-13gdjn24 INFO:root:legacy_id: gold:Gp0213348 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-13gdjn24 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:076ff634d28625c03f79842a9b3bb354 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213348 INFO:root:found 1 records INFO:root:record: nmdc:d6b63e3a46732091d898cf437faff699, Read QC Activity for nmdc:mga05r31 INFO:root:PassingDataObject: nmdc:94c4f26cd3bfe22749dfada6a85df549 INFO:root:PassingDataObject: nmdc:4b3e1513f9dea9a1caf90021a33f588f INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213348 INFO:root:found 1 records INFO:root:record: nmdc:d6b63e3a46732091d898cf437faff699, ReadBased Analysis Activity for nmdc:mga05r31 -INFO:root:PassingDataObject: nmdc:aec249c35e1c7db4d0295823c2473ce4 -INFO:root:PassingDataObject: nmdc:aab0ffee88319927d99955503be5d25c INFO:root:PassingDataObject: nmdc:37556f9d6d9e076d3a4ff7351de59195 +INFO:root:PassingDataObject: nmdc:aab0ffee88319927d99955503be5d25c +INFO:root:PassingDataObject: nmdc:cd67787fdedef21e1dae8d0273a2954e INFO:root:PassingDataObject: nmdc:0ad4e158d9409664f353c759d104cd03 -INFO:root:PassingDataObject: nmdc:e8a37758c99f077a094b8f0bee3e3084 -INFO:root:PassingDataObject: nmdc:f9feb6472b82630a835d826cddf6d372 INFO:root:PassingDataObject: nmdc:9aff0c76859be07434ad33c701355628 -INFO:root:PassingDataObject: nmdc:cd67787fdedef21e1dae8d0273a2954e +INFO:root:PassingDataObject: nmdc:e8a37758c99f077a094b8f0bee3e3084 INFO:root:PassingDataObject: nmdc:abfda82b829a6f486e2e4357eae04617 +INFO:root:PassingDataObject: nmdc:f9feb6472b82630a835d826cddf6d372 +INFO:root:PassingDataObject: nmdc:aec249c35e1c7db4d0295823c2473ce4 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213348 INFO:root:found 1 records INFO:root:record: nmdc:d6b63e3a46732091d898cf437faff699, Assembly Activity for nmdc:mga05r31 INFO:root:PassingDataObject: nmdc:89bc146abfc7fd7200250a905c714d15 -INFO:root:PassingDataObject: nmdc:7335d465520b07babf5397dfe9633945 +INFO:root:PassingDataObject: nmdc:4e427ceb17df98fa3c9138ecfefb163b INFO:root:PassingDataObject: nmdc:ed1b19ad42494558c2fff1fc35f2afa9 INFO:root:PassingDataObject: nmdc:85e71c34e863288c6036796051bf7123 -INFO:root:PassingDataObject: nmdc:4e427ceb17df98fa3c9138ecfefb163b +INFO:root:PassingDataObject: nmdc:7335d465520b07babf5397dfe9633945 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213348 INFO:root:found 1 records INFO:root:record: nmdc:d6b63e3a46732091d898cf437faff699, Annotation Activity for nmdc:mga05r31 -INFO:root:PassingDataObject: nmdc:89fe925b0f6db97fc178d6411178b6ad INFO:root:PassingDataObject: nmdc:3789b331f8b2b6e5174824dceee85156 -INFO:root:PassingDataObject: nmdc:4b02c688ab11eb1d19eabe6662de669e -INFO:root:PassingDataObject: nmdc:acb76bf3ef490c6bbdf0bb9dc1948f2e +INFO:root:PassingDataObject: nmdc:c85a08150ec6eaf45a7878d525e6d95e +INFO:root:PassingDataObject: nmdc:29dbd11583f29e40dc055024391c9cc1 +INFO:root:PassingDataObject: nmdc:de50781accf546c0416a160f09f29d0e +INFO:root:PassingDataObject: nmdc:4cff8b1c6210993e9903bfaca5aacc44 +INFO:root:PassingDataObject: nmdc:71dec20427ca024c2489a303318711d9 INFO:root:PassingDataObject: nmdc:07574effad1b02b13f7dc2a061cb77c6 -INFO:root:PassingDataObject: nmdc:8c18231cba69f4ab65964197ed1d581b -INFO:root:PassingDataObject: nmdc:190ecc0b1994640e69915a4c7a8e49a4 INFO:root:PassingDataObject: nmdc:e20b8276f77b2363f90c90c63bb59bfb -INFO:root:PassingDataObject: nmdc:71dec20427ca024c2489a303318711d9 -INFO:root:PassingDataObject: nmdc:d1155d2eb271f5b1064aa7663c818d1b -INFO:root:PassingDataObject: nmdc:7820dc2857dd6cd59cec8955c3b612b2 -INFO:root:PassingDataObject: nmdc:4cff8b1c6210993e9903bfaca5aacc44 +INFO:root:PassingDataObject: nmdc:acb76bf3ef490c6bbdf0bb9dc1948f2e INFO:root:PassingDataObject: nmdc:765ef32dcb1f7bd78cb1b930c4953fad -INFO:root:PassingDataObject: nmdc:de50781accf546c0416a160f09f29d0e -INFO:root:PassingDataObject: nmdc:29dbd11583f29e40dc055024391c9cc1 INFO:root:PassingDataObject: nmdc:aacf4d8a1be61fff6bc337a49b6e1b0e +INFO:root:PassingDataObject: nmdc:4b02c688ab11eb1d19eabe6662de669e +INFO:root:PassingDataObject: nmdc:8c18231cba69f4ab65964197ed1d581b +INFO:root:PassingDataObject: nmdc:d1155d2eb271f5b1064aa7663c818d1b +INFO:root:PassingDataObject: nmdc:7820dc2857dd6cd59cec8955c3b612b2 +INFO:root:PassingDataObject: nmdc:89fe925b0f6db97fc178d6411178b6ad INFO:root:PassingDataObject: nmdc:1e0d585519819d8941592c3dd7007044 -INFO:root:PassingDataObject: nmdc:c85a08150ec6eaf45a7878d525e6d95e INFO:root:PassingDataObject: nmdc:b7b4152addfaeec51101ecd62585cb73 +INFO:root:PassingDataObject: nmdc:190ecc0b1994640e69915a4c7a8e49a4 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213348 INFO:root:found 1 records INFO:root:record: nmdc:d6b63e3a46732091d898cf437faff699, MAGs Analysis Activity for nmdc:mga05r31 -INFO:root:PassingDataObject: nmdc:99bdecd5cd13fb399cb28610bd22763c INFO:root:PassingDataObject: nmdc:d4a50874584919af6b5cef02ab4bead8 +INFO:root:PassingDataObject: nmdc:99bdecd5cd13fb399cb28610bd22763c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213348 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-cw2se491 INFO:root:legacy_id: gold:Gp0213345 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-cw2se491 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4b5fb58671da52ebbff9fc85324638ac INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, Read QC Activity for nmdc:mga0tf79 -INFO:root:PassingDataObject: nmdc:265fd0b881198f0f80ce5c5bcf8eca9b INFO:root:PassingDataObject: nmdc:35c0f54b804137bde8ed81731a4d893d +INFO:root:PassingDataObject: nmdc:265fd0b881198f0f80ce5c5bcf8eca9b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, ReadBased Analysis Activity for nmdc:mga0tf79 -INFO:root:PassingDataObject: nmdc:96ae41661f13057c768c8bce130b48f4 -INFO:root:PassingDataObject: nmdc:c962c7cbed3aa54888789be8bb96b815 INFO:root:PassingDataObject: nmdc:e6bee0593905a7f060c05197c1db8c5b -INFO:root:PassingDataObject: nmdc:655b130e00d0a38b1ad9663651ff0fee +INFO:root:PassingDataObject: nmdc:226525a4b5a49e3df4b7318918074a5b +INFO:root:PassingDataObject: nmdc:43d0e628b153f69958ca1b9ddf2b632e INFO:root:PassingDataObject: nmdc:8e3d33b96dc2b39b2b0a4f498df1c982 +INFO:root:PassingDataObject: nmdc:c962c7cbed3aa54888789be8bb96b815 INFO:root:PassingDataObject: nmdc:b99f97eda4950f6289cddd8954c39f96 +INFO:root:PassingDataObject: nmdc:96ae41661f13057c768c8bce130b48f4 INFO:root:PassingDataObject: nmdc:cb88401ee8248955c07828fbf2f55eca -INFO:root:PassingDataObject: nmdc:226525a4b5a49e3df4b7318918074a5b -INFO:root:PassingDataObject: nmdc:43d0e628b153f69958ca1b9ddf2b632e +INFO:root:PassingDataObject: nmdc:655b130e00d0a38b1ad9663651ff0fee INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, Assembly Activity for nmdc:mga0tf79 +INFO:root:PassingDataObject: nmdc:288461f14e244e9f8a682bbc35ad3d06 INFO:root:PassingDataObject: nmdc:47ff7457e64164dac8314f289862f0c9 INFO:root:PassingDataObject: nmdc:736ab7919817f20385ef3a332567902c INFO:root:PassingDataObject: nmdc:184bc1165d1a3ba37520f4b2846f3293 INFO:root:PassingDataObject: nmdc:cc641532c09acc9622a197f6420d2fcc -INFO:root:PassingDataObject: nmdc:288461f14e244e9f8a682bbc35ad3d06 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, Annotation Activity for nmdc:mga0tf79 +INFO:root:PassingDataObject: nmdc:5526bc0f5226a04ae861a1b092eacc2e INFO:root:PassingDataObject: nmdc:aab7460b53e4142d2f8c4ec69c9e25af -INFO:root:PassingDataObject: nmdc:aeba2cabcc7af462e8a6fef02d7bdcb8 -INFO:root:PassingDataObject: nmdc:19cd08cb4cd51ac0576e093a895b3000 -INFO:root:PassingDataObject: nmdc:383f0b129c35ca814505892b463d9c7c +INFO:root:PassingDataObject: nmdc:a074be16ed62b8fa82619432732722a3 +INFO:root:PassingDataObject: nmdc:59374c01e790e264bad659a712109006 +INFO:root:PassingDataObject: nmdc:bb1dd9c64dc2a25ceda491bee6fc3f92 +INFO:root:PassingDataObject: nmdc:f37059e19f997a60c74a66179bd2780d INFO:root:PassingDataObject: nmdc:659683ecb494d193b78ea26e5b201d8b -INFO:root:PassingDataObject: nmdc:1dc51f2d06de6fd49c2517f19a5918d4 -INFO:root:PassingDataObject: nmdc:5526bc0f5226a04ae861a1b092eacc2e +INFO:root:PassingDataObject: nmdc:26091c8d5fa8cf3775046535892daaf0 +INFO:root:PassingDataObject: nmdc:383f0b129c35ca814505892b463d9c7c INFO:root:PassingDataObject: nmdc:ac72326277a24e15de3eca0299f80610 +INFO:root:PassingDataObject: nmdc:1dc51f2d06de6fd49c2517f19a5918d4 +INFO:root:PassingDataObject: nmdc:6d473a271f41bb6f433cea28d299fbbd INFO:root:PassingDataObject: nmdc:df6e5b2691e77756f3f8a8a0637ca36d +INFO:root:PassingDataObject: nmdc:1e8fbe72694a0d02c82f7af2b7a1861a +INFO:root:PassingDataObject: nmdc:aeba2cabcc7af462e8a6fef02d7bdcb8 INFO:root:PassingDataObject: nmdc:fd025564e14719be1cfecf7d1366bb62 -INFO:root:PassingDataObject: nmdc:59374c01e790e264bad659a712109006 -INFO:root:PassingDataObject: nmdc:26091c8d5fa8cf3775046535892daaf0 -INFO:root:PassingDataObject: nmdc:f37059e19f997a60c74a66179bd2780d -INFO:root:PassingDataObject: nmdc:6d473a271f41bb6f433cea28d299fbbd -INFO:root:PassingDataObject: nmdc:a074be16ed62b8fa82619432732722a3 INFO:root:PassingDataObject: nmdc:59eeac13ed2b927bb326d52be8fc2591 -INFO:root:PassingDataObject: nmdc:1e8fbe72694a0d02c82f7af2b7a1861a INFO:root:PassingDataObject: nmdc:bdf911f9d922c14c19310ee6ad484461 -INFO:root:PassingDataObject: nmdc:bb1dd9c64dc2a25ceda491bee6fc3f92 +INFO:root:PassingDataObject: nmdc:19cd08cb4cd51ac0576e093a895b3000 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213345 INFO:root:found 1 records INFO:root:record: nmdc:9f918130ae225680650bd4f9c1a1a76f, MAGs Analysis Activity for nmdc:mga0tf79 INFO:root:PassingDataObject: nmdc:f8c8ff0b3b58338175a389564e3ba706 INFO:root:PassingDataObject: nmdc:888d686e8dc1bc1ae54c2e1aa24828d6 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213345 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-kxct1j50 INFO:root:legacy_id: gold:Gp0213350 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-kxct1j50 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fc02b18994a1ea74808d16d18735a04a INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, Read QC Activity for nmdc:mga06d65 -INFO:root:PassingDataObject: nmdc:ea20f99ba35d3ce686e5e199b34704e5 INFO:root:PassingDataObject: nmdc:7675fc38a8d6c6ea22ef1b9bdcb14499 +INFO:root:PassingDataObject: nmdc:ea20f99ba35d3ce686e5e199b34704e5 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, ReadBased Analysis Activity for nmdc:mga06d65 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:4a43bf91c943db8e9829ea992c576c8e -ERROR:root:FailedDataObject: nmdc:810f3a23fe6861a24397cec5a7635f65, -ERROR:root:FailedDataObject: nmdc:98c72b11c04b1c9c5b65c03a7e827136, +INFO:root:PassingDataObject: nmdc:4793f08b0984e59d9654b0e84b7c4964 +INFO:root:PassingDataObject: nmdc:57510c34441755cac37e45ceef026e26 +INFO:root:PassingDataObject: nmdc:ccfe5635bfcc535acbbc7b9677963ebb ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:4a43bf91c943db8e9829ea992c576c8e +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:4a43bf91c943db8e9829ea992c576c8e ERROR:root:FailedDataObject: nmdc:fbfc3556f0b6b81127dccdd0fbb319aa, -ERROR:root:FailedDataObject: nmdc:57510c34441755cac37e45ceef026e26, -ERROR:root:FailedDataObject: nmdc:4793f08b0984e59d9654b0e84b7c4964, +ERROR:root:FailedDataObject: nmdc:98c72b11c04b1c9c5b65c03a7e827136, +ERROR:root:FailedDataObject: nmdc:810f3a23fe6861a24397cec5a7635f65, ERROR:root:FailedDataObject: nmdc:4b1fffbdc4130dfc262cbab3b7ef94e3, -ERROR:root:FailedDataObject: nmdc:ccfe5635bfcc535acbbc7b9677963ebb, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4a43bf91c943db8e9829ea992c576c8e, ReadBased Analysis Activity for nmdc:mga06d65 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, Assembly Activity for nmdc:mga06d65 +INFO:root:PassingDataObject: nmdc:9abbaf8bb8ec0d8f687d25a01e4ba8c7 INFO:root:PassingDataObject: nmdc:d22adbc2f694c0fe06081271f2d70414 -INFO:root:PassingDataObject: nmdc:0af96b416a01858dbe3ebeebfab48515 INFO:root:PassingDataObject: nmdc:552e73866c3a9542daf7cbe9ecb4eb5e -INFO:root:PassingDataObject: nmdc:9abbaf8bb8ec0d8f687d25a01e4ba8c7 INFO:root:PassingDataObject: nmdc:0e39a861965a826732018e11da3523f9 +INFO:root:PassingDataObject: nmdc:0af96b416a01858dbe3ebeebfab48515 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, Annotation Activity for nmdc:mga06d65 -INFO:root:PassingDataObject: nmdc:124aa75b404036a1c982a28a1b76ebe8 -INFO:root:PassingDataObject: nmdc:7bacc07acf81a5dd7d326ef7288a74a3 -INFO:root:PassingDataObject: nmdc:f4e18b724ad426211b3f65297e1ba3da -INFO:root:PassingDataObject: nmdc:212e84461983b91273e7c22367f71fbd -INFO:root:PassingDataObject: nmdc:31434400394eaf33811db5150f5c3941 -INFO:root:PassingDataObject: nmdc:c308a6ac7d22662f6ee2587820c40840 -INFO:root:PassingDataObject: nmdc:d98d891de757a7c864b586be809256cc INFO:root:PassingDataObject: nmdc:2185aeb3431945770c41c9c90773228a -INFO:root:PassingDataObject: nmdc:b9c270503753f8a36bdb7b7046ef0afd -INFO:root:PassingDataObject: nmdc:fd258347db9491861054c7f54290fa8b +INFO:root:PassingDataObject: nmdc:00348e5dbcf8bb9e4ea9b0c9e156497a INFO:root:PassingDataObject: nmdc:c26e242c85c84c4a551677d162630e9c INFO:root:PassingDataObject: nmdc:4d64faff842049476c2fcad82b7d15ef +INFO:root:PassingDataObject: nmdc:d95fff1dc925eaa80caa91ec28fe64a2 +INFO:root:PassingDataObject: nmdc:d98d891de757a7c864b586be809256cc +INFO:root:PassingDataObject: nmdc:1234ad2d1d6afe3131f0551fe4b2ccc5 +INFO:root:PassingDataObject: nmdc:5aa8b16b1b229ce7a77ad4e766343db5 INFO:root:PassingDataObject: nmdc:e70ac8a5591e8cfc872dfb3952dc30db -INFO:root:PassingDataObject: nmdc:00348e5dbcf8bb9e4ea9b0c9e156497a +INFO:root:PassingDataObject: nmdc:31434400394eaf33811db5150f5c3941 +INFO:root:PassingDataObject: nmdc:212e84461983b91273e7c22367f71fbd +INFO:root:PassingDataObject: nmdc:fd258347db9491861054c7f54290fa8b INFO:root:PassingDataObject: nmdc:17eb2ae07093309781aa7cf2c6954484 INFO:root:PassingDataObject: nmdc:7c59e24c37b6c11c7511e2e092f649f4 -INFO:root:PassingDataObject: nmdc:1234ad2d1d6afe3131f0551fe4b2ccc5 -INFO:root:PassingDataObject: nmdc:d95fff1dc925eaa80caa91ec28fe64a2 -INFO:root:PassingDataObject: nmdc:5aa8b16b1b229ce7a77ad4e766343db5 +INFO:root:PassingDataObject: nmdc:f4e18b724ad426211b3f65297e1ba3da +INFO:root:PassingDataObject: nmdc:c308a6ac7d22662f6ee2587820c40840 +INFO:root:PassingDataObject: nmdc:7bacc07acf81a5dd7d326ef7288a74a3 +INFO:root:PassingDataObject: nmdc:b9c270503753f8a36bdb7b7046ef0afd +INFO:root:PassingDataObject: nmdc:124aa75b404036a1c982a28a1b76ebe8 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213350 INFO:root:found 1 records INFO:root:record: nmdc:4a43bf91c943db8e9829ea992c576c8e, MAGs Analysis Activity for nmdc:mga06d65 INFO:root:PassingDataObject: nmdc:08836adbf8ab58383835621ee7315ac2 INFO:root:PassingDataObject: nmdc:6765b398ddcbd9fc61af7d2718133664 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213350 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-a85hx178 INFO:root:legacy_id: gold:Gp0213349 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-a85hx178 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f4ddf238d2d7dec9c86b93713d0ff075 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, Read QC Activity for nmdc:mga0px33 -INFO:root:PassingDataObject: nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 INFO:root:PassingDataObject: nmdc:dc0fa28035cb17b7fa2b49660cdecd5d +INFO:root:PassingDataObject: nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, ReadBased Analysis Activity for nmdc:mga0px33 +INFO:root:PassingDataObject: nmdc:58310a3abb2fcde26fbc973721f7ab25 INFO:root:PassingDataObject: nmdc:313c08b83a542d886a3985d16fd1071c -INFO:root:PassingDataObject: nmdc:0c4414e23ae24e4c902673b6e271bb62 -INFO:root:PassingDataObject: nmdc:a0c25fe760f0f7569f9deec217cccb77 -INFO:root:PassingDataObject: nmdc:bfe90287f58a65b9232f177e7b8429ea INFO:root:PassingDataObject: nmdc:eab271aef23285a71c50e411294fa674 -INFO:root:PassingDataObject: nmdc:023a447cc739b46db2c2eeb5d440c352 -INFO:root:PassingDataObject: nmdc:e57315a6742ed7a21b68d10570bb7247 INFO:root:PassingDataObject: nmdc:bd5352c76241c60df60fd8e43e13208d -INFO:root:PassingDataObject: nmdc:58310a3abb2fcde26fbc973721f7ab25 +INFO:root:PassingDataObject: nmdc:e57315a6742ed7a21b68d10570bb7247 +INFO:root:PassingDataObject: nmdc:0c4414e23ae24e4c902673b6e271bb62 +INFO:root:PassingDataObject: nmdc:023a447cc739b46db2c2eeb5d440c352 +INFO:root:PassingDataObject: nmdc:bfe90287f58a65b9232f177e7b8429ea +INFO:root:PassingDataObject: nmdc:a0c25fe760f0f7569f9deec217cccb77 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, Assembly Activity for nmdc:mga0px33 -INFO:root:PassingDataObject: nmdc:9273b988e3cd8a9ef33144e129834eca -INFO:root:PassingDataObject: nmdc:5a1daf7eeeb3197f5ea7d9350f79ec8e INFO:root:PassingDataObject: nmdc:2f1737d3cebfb958e3317a38a1b9638d -INFO:root:PassingDataObject: nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 +INFO:root:PassingDataObject: nmdc:5a1daf7eeeb3197f5ea7d9350f79ec8e INFO:root:PassingDataObject: nmdc:582e46ab7e21c5151d7e01e33fa6fb0f +INFO:root:PassingDataObject: nmdc:9273b988e3cd8a9ef33144e129834eca +INFO:root:PassingDataObject: nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, Annotation Activity for nmdc:mga0px33 -INFO:root:PassingDataObject: nmdc:94b93a12146e7927d7949844156dd0e7 -INFO:root:PassingDataObject: nmdc:0d75da6943d4d5be13b7bd0dbb23140f -INFO:root:PassingDataObject: nmdc:bc99bf96c0a916d19298ebc8bc48371e -INFO:root:PassingDataObject: nmdc:a05e18287f6e5d47a3add87b58d7a590 INFO:root:PassingDataObject: nmdc:a125bb8b838aed9da23a99d5b9ae26ed +INFO:root:PassingDataObject: nmdc:0d75da6943d4d5be13b7bd0dbb23140f +INFO:root:PassingDataObject: nmdc:38f949bd0944ad2c8974759077a8125c +INFO:root:PassingDataObject: nmdc:04cdb354b543805217f2fe6fcaac133b +INFO:root:PassingDataObject: nmdc:65fef4edd78a9d6818506d441066da4a INFO:root:PassingDataObject: nmdc:f80a0b3ccd497d7fe0a0e6ab7c5532cb -INFO:root:PassingDataObject: nmdc:5a3141601753b561c5cb4406c973277e INFO:root:PassingDataObject: nmdc:511fd901f2ae90fd2b37c4f860de6be8 -INFO:root:PassingDataObject: nmdc:08cee96951c0101e8b8591f0c35fbe43 -INFO:root:PassingDataObject: nmdc:47b5f56e36703d6b0f393dbdfac83a0d -INFO:root:PassingDataObject: nmdc:7b7555f05277536429e5e738f44147bb -INFO:root:PassingDataObject: nmdc:442d5c426c2d55c37268d0259978cfeb +INFO:root:PassingDataObject: nmdc:5a3141601753b561c5cb4406c973277e INFO:root:PassingDataObject: nmdc:be50ee3509d61cbef8f8d99cac352d06 -INFO:root:PassingDataObject: nmdc:2b4a6684423acce5f0d07e08539249a1 +INFO:root:PassingDataObject: nmdc:bc99bf96c0a916d19298ebc8bc48371e INFO:root:PassingDataObject: nmdc:0e81822d9ec58b61f6fd6aed11bac8aa -INFO:root:PassingDataObject: nmdc:04cdb354b543805217f2fe6fcaac133b -INFO:root:PassingDataObject: nmdc:65fef4edd78a9d6818506d441066da4a +INFO:root:PassingDataObject: nmdc:7b7555f05277536429e5e738f44147bb INFO:root:PassingDataObject: nmdc:77e84043050c4290d9cc769e6adbb7b3 -INFO:root:PassingDataObject: nmdc:38f949bd0944ad2c8974759077a8125c +INFO:root:PassingDataObject: nmdc:a05e18287f6e5d47a3add87b58d7a590 +INFO:root:PassingDataObject: nmdc:08cee96951c0101e8b8591f0c35fbe43 +INFO:root:PassingDataObject: nmdc:442d5c426c2d55c37268d0259978cfeb +INFO:root:PassingDataObject: nmdc:94b93a12146e7927d7949844156dd0e7 +INFO:root:PassingDataObject: nmdc:2b4a6684423acce5f0d07e08539249a1 +INFO:root:PassingDataObject: nmdc:47b5f56e36703d6b0f393dbdfac83a0d INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213349 INFO:root:found 1 records INFO:root:record: nmdc:c27d9ea6403f00d6939b94ade5bb19a1, MAGs Analysis Activity for nmdc:mga0px33 INFO:root:PassingDataObject: nmdc:8e5b1d0f4be9a3a3576fe083054b03f9 INFO:root:PassingDataObject: nmdc:1922bce699639591da0fbad61ffe0aa5 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213349 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-0qq1wf68 INFO:root:legacy_id: gold:Gp0213351 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-0qq1wf68 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4acac4ba90588c9923ed2d02d3f516b7 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, Read QC Activity for nmdc:mga05y13 -INFO:root:PassingDataObject: nmdc:b0ac82926897b31cf14de8d1b7499250 INFO:root:PassingDataObject: nmdc:79e13b5543b1c56a065b5b7205d05cc8 +INFO:root:PassingDataObject: nmdc:b0ac82926897b31cf14de8d1b7499250 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, ReadBased Analysis Activity for nmdc:mga05y13 -INFO:root:PassingDataObject: nmdc:f6bac3ea3a4b8bab45b2f089c53b779f -INFO:root:PassingDataObject: nmdc:0625ec7747b047894773ecfdd88f49da -INFO:root:PassingDataObject: nmdc:2a4c879329a04e75907617d0ac606fbf -INFO:root:PassingDataObject: nmdc:4fe4f56c3c6533127e224c03f2691de4 -INFO:root:PassingDataObject: nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 INFO:root:PassingDataObject: nmdc:26e7af846b354ab6f9b0d47037b6ed5d -INFO:root:PassingDataObject: nmdc:b6d41063251b5b35d3aa554d3f77f9c9 +INFO:root:PassingDataObject: nmdc:f6bac3ea3a4b8bab45b2f089c53b779f INFO:root:PassingDataObject: nmdc:eca839aa68f3f38e3cdf969dc6f13929 +INFO:root:PassingDataObject: nmdc:b6d41063251b5b35d3aa554d3f77f9c9 +INFO:root:PassingDataObject: nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 INFO:root:PassingDataObject: nmdc:6b362a17555a555ca280dc1a774d8257 +INFO:root:PassingDataObject: nmdc:2a4c879329a04e75907617d0ac606fbf +INFO:root:PassingDataObject: nmdc:4fe4f56c3c6533127e224c03f2691de4 +INFO:root:PassingDataObject: nmdc:0625ec7747b047894773ecfdd88f49da INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, Assembly Activity for nmdc:mga05y13 +INFO:root:PassingDataObject: nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 INFO:root:PassingDataObject: nmdc:5a7912ed567487e12d72e6ffe8737d9b INFO:root:PassingDataObject: nmdc:924abfaf7ce029d1c4f21f0ec9a26be4 -INFO:root:PassingDataObject: nmdc:a6f7572a276c5179f403be6dc6f1c6a4 -INFO:root:PassingDataObject: nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 INFO:root:PassingDataObject: nmdc:bcbd1a8e38b5b58ca2e25383e46bbe49 +INFO:root:PassingDataObject: nmdc:a6f7572a276c5179f403be6dc6f1c6a4 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, Annotation Activity for nmdc:mga05y13 +INFO:root:PassingDataObject: nmdc:04095292bb8e05c5a1e66447ebb006c0 +INFO:root:PassingDataObject: nmdc:520aebc1f05a40afd6d8421ba2b4d82e +INFO:root:PassingDataObject: nmdc:2b167711053825c8a213bb64c6b70db5 INFO:root:PassingDataObject: nmdc:cf75bad48bbaa4d770972c05b05529d1 -INFO:root:PassingDataObject: nmdc:fc3b12f7f52142f66325463bbada9201 +INFO:root:PassingDataObject: nmdc:3505bf810f727fbd23921910d1a453e8 INFO:root:PassingDataObject: nmdc:b894d2ddedfa1faf2b361adbc2086c32 +INFO:root:PassingDataObject: nmdc:e16bffddf5589eeb4bb61a6b1971f69d +INFO:root:PassingDataObject: nmdc:649c77a090f1779bf41252f3563dd74f INFO:root:PassingDataObject: nmdc:e9f202103fbda234f3c1c5b0cfb8d533 -INFO:root:PassingDataObject: nmdc:2b167711053825c8a213bb64c6b70db5 +INFO:root:PassingDataObject: nmdc:fc4d1b8ff73748d17391f4505c269e47 +INFO:root:PassingDataObject: nmdc:cb73e36e7586d312dfac6cb83280e7fe INFO:root:PassingDataObject: nmdc:d22b49eeaa63216bbd91b1b79a8220a0 -INFO:root:PassingDataObject: nmdc:29f36170b4131d150593aeee7fbd321c -INFO:root:PassingDataObject: nmdc:649c77a090f1779bf41252f3563dd74f -INFO:root:PassingDataObject: nmdc:c3f610a18471059c363e2e2acddef119 INFO:root:PassingDataObject: nmdc:6ca53c86da3f3f5f503b4be7359bbf5c -INFO:root:PassingDataObject: nmdc:93741b48a92c3c82aa89e3346883be26 -INFO:root:PassingDataObject: nmdc:e16bffddf5589eeb4bb61a6b1971f69d -INFO:root:PassingDataObject: nmdc:520aebc1f05a40afd6d8421ba2b4d82e +INFO:root:PassingDataObject: nmdc:29f36170b4131d150593aeee7fbd321c INFO:root:PassingDataObject: nmdc:cf8768c5e36d7d3e89e46b1b21ed0b61 -INFO:root:PassingDataObject: nmdc:fc4d1b8ff73748d17391f4505c269e47 +INFO:root:PassingDataObject: nmdc:c3f610a18471059c363e2e2acddef119 +INFO:root:PassingDataObject: nmdc:fc3b12f7f52142f66325463bbada9201 INFO:root:PassingDataObject: nmdc:b60bf1534600f6489c094d590d55cca7 -INFO:root:PassingDataObject: nmdc:3505bf810f727fbd23921910d1a453e8 -INFO:root:PassingDataObject: nmdc:04095292bb8e05c5a1e66447ebb006c0 -INFO:root:PassingDataObject: nmdc:cb73e36e7586d312dfac6cb83280e7fe +INFO:root:PassingDataObject: nmdc:93741b48a92c3c82aa89e3346883be26 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213351 INFO:root:found 1 records INFO:root:record: nmdc:929283826cba31853761db726c97ef41, MAGs Analysis Activity for nmdc:mga05y13 INFO:root:PassingDataObject: nmdc:0cb9da7992cb898ea3b87b58d91bcf55 INFO:root:PassingDataObject: nmdc:55b30c6fe7be32d90bc410d652b0ad9c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213351 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-5v7dy272 INFO:root:legacy_id: gold:Gp0213352 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-5v7dy272 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a6596e0c6c077b864048f00a68ab6c78 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213352 INFO:root:found 1 records INFO:root:record: nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3, Read QC Activity for nmdc:mga0hz22 INFO:root:PassingDataObject: nmdc:41e58af45c2187a61af5c75b1f0971fa INFO:root:PassingDataObject: nmdc:5d3dafccb690b86e43f9de986fa067f1 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213352 INFO:root:found 1 records INFO:root:record: nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3, ReadBased Analysis Activity for nmdc:mga0hz22 -INFO:root:PassingDataObject: nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 -INFO:root:PassingDataObject: nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf -INFO:root:PassingDataObject: nmdc:caf1b3c45796d80e82846e2363001a2b -INFO:root:PassingDataObject: nmdc:bf41e7e39784afaaac797359815c2f81 INFO:root:PassingDataObject: nmdc:d034667d4d21b468a27705a25c77df36 INFO:root:PassingDataObject: nmdc:74094920c294e1906a83c34654619266 -INFO:root:PassingDataObject: nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 +INFO:root:PassingDataObject: nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 INFO:root:PassingDataObject: nmdc:373a1483931f9805a09a8e492f9a2392 INFO:root:PassingDataObject: nmdc:892782dc631a5581fcaf93bd5ccc473d +INFO:root:PassingDataObject: nmdc:bf41e7e39784afaaac797359815c2f81 +INFO:root:PassingDataObject: nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 +INFO:root:PassingDataObject: nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf +INFO:root:PassingDataObject: nmdc:caf1b3c45796d80e82846e2363001a2b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213352 INFO:root:found 1 records INFO:root:record: nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3, Assembly Activity for nmdc:mga0hz22 -INFO:root:PassingDataObject: nmdc:b0e3c146dfccbce97dbe291b8a1340cd -INFO:root:PassingDataObject: nmdc:255f27df330491e4fdf0d8ac231c26b5 -INFO:root:PassingDataObject: nmdc:a7a83584cf2763994ff0eff2423bb4fd INFO:root:PassingDataObject: nmdc:9e4887ca5a5d000d65beade012be35e7 +INFO:root:PassingDataObject: nmdc:a7a83584cf2763994ff0eff2423bb4fd INFO:root:PassingDataObject: nmdc:1ed7caaf9ef411a27133ec7867fd0a76 +INFO:root:PassingDataObject: nmdc:255f27df330491e4fdf0d8ac231c26b5 +INFO:root:PassingDataObject: nmdc:b0e3c146dfccbce97dbe291b8a1340cd INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213352 INFO:root:found 1 records INFO:root:record: nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3, Annotation Activity for nmdc:mga0hz22 +INFO:root:PassingDataObject: nmdc:67027a731022539e4b1681caaf78591d +INFO:root:PassingDataObject: nmdc:7bbdacadba7bd98e99c23a5153432560 INFO:root:PassingDataObject: nmdc:4745ac989eabfeed0724f539d25dc995 +INFO:root:PassingDataObject: nmdc:2d027fe168744dd5de5039115862f46d INFO:root:PassingDataObject: nmdc:37b6c226d973dcf4c83a39562867bd47 -INFO:root:PassingDataObject: nmdc:91fb8a81ca3b6f101e14a5d955884eb8 -INFO:root:PassingDataObject: nmdc:c96bddf44b5efbc92a3e9a3bf1ebcc40 -INFO:root:PassingDataObject: nmdc:76b6e11d1639b90a2156a0a39a50c1e2 -INFO:root:PassingDataObject: nmdc:e87664a0eb2e235a10409077b3609c17 +INFO:root:PassingDataObject: nmdc:3dee6d450e566764dc4d37db5fc9f0f0 +INFO:root:PassingDataObject: nmdc:d4d949f230b4b48571d8229abaa9f758 +INFO:root:PassingDataObject: nmdc:23b9aebb0ff160c8f92aebc71862a24d INFO:root:PassingDataObject: nmdc:1a4e57034c6587d039dd84e48270bc96 INFO:root:PassingDataObject: nmdc:c8070c837b70dd37060f7d3566869434 -INFO:root:PassingDataObject: nmdc:7bbdacadba7bd98e99c23a5153432560 -INFO:root:PassingDataObject: nmdc:c24d39b8614066cf9c084c9e9775efdd -INFO:root:PassingDataObject: nmdc:641ea510c692582e538b22436028a967 INFO:root:PassingDataObject: nmdc:e60076329d836c44f7adc503bc0bf992 -INFO:root:PassingDataObject: nmdc:23b9aebb0ff160c8f92aebc71862a24d -INFO:root:PassingDataObject: nmdc:926df4f232ce997c633b56db48d9b3db -INFO:root:PassingDataObject: nmdc:2d027fe168744dd5de5039115862f46d -INFO:root:PassingDataObject: nmdc:d4d949f230b4b48571d8229abaa9f758 -INFO:root:PassingDataObject: nmdc:67027a731022539e4b1681caaf78591d +INFO:root:PassingDataObject: nmdc:76b6e11d1639b90a2156a0a39a50c1e2 +INFO:root:PassingDataObject: nmdc:e87664a0eb2e235a10409077b3609c17 INFO:root:PassingDataObject: nmdc:711e6eb584fdcbf851ad581e56f5f91d -INFO:root:PassingDataObject: nmdc:3dee6d450e566764dc4d37db5fc9f0f0 +INFO:root:PassingDataObject: nmdc:c24d39b8614066cf9c084c9e9775efdd +INFO:root:PassingDataObject: nmdc:926df4f232ce997c633b56db48d9b3db +INFO:root:PassingDataObject: nmdc:91fb8a81ca3b6f101e14a5d955884eb8 +INFO:root:PassingDataObject: nmdc:641ea510c692582e538b22436028a967 +INFO:root:PassingDataObject: nmdc:c96bddf44b5efbc92a3e9a3bf1ebcc40 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213352 INFO:root:found 1 records INFO:root:record: nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3, MAGs Analysis Activity for nmdc:mga0hz22 -INFO:root:PassingDataObject: nmdc:b58d3710b1d6f8c887b3d9af7207efeb INFO:root:PassingDataObject: nmdc:2602a330b5d14c34d49a1edd575301b3 +INFO:root:PassingDataObject: nmdc:b58d3710b1d6f8c887b3d9af7207efeb INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213352 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-qg3vxj76 INFO:root:legacy_id: gold:Gp0213353 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-qg3vxj76 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:3900b15ebaa5ecba247164c7165d2f38 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, Read QC Activity for nmdc:mga02p34 INFO:root:PassingDataObject: nmdc:8010e289e2cbcb88dc55cae1c5082851 INFO:root:PassingDataObject: nmdc:1978062c63a0079d779f0f1a820296e7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, ReadBased Analysis Activity for nmdc:mga02p34 +INFO:root:PassingDataObject: nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 +INFO:root:PassingDataObject: nmdc:5108d260ae1b95d58f3706d35ccfb83f INFO:root:PassingDataObject: nmdc:640b149083a469e3075770a03c5d20e0 +INFO:root:PassingDataObject: nmdc:0bdeb595483c185c42c5245d53f2a0c7 +INFO:root:PassingDataObject: nmdc:c67283d3ccf71f511b8460b8c1cc692a INFO:root:PassingDataObject: nmdc:406855169336718091ad1e568e6fb418 INFO:root:PassingDataObject: nmdc:8ed5a5a06a47e85f77df6dab7a91039b INFO:root:PassingDataObject: nmdc:d52e6df0a0986f444253392961e943d4 -INFO:root:PassingDataObject: nmdc:c67283d3ccf71f511b8460b8c1cc692a -INFO:root:PassingDataObject: nmdc:0bdeb595483c185c42c5245d53f2a0c7 -INFO:root:PassingDataObject: nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 INFO:root:PassingDataObject: nmdc:29d7979ce172e99795e2ba9f5b27ee22 -INFO:root:PassingDataObject: nmdc:5108d260ae1b95d58f3706d35ccfb83f INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, Assembly Activity for nmdc:mga02p34 +INFO:root:PassingDataObject: nmdc:ebe16a3e4d650652f0a39e930872a158 INFO:root:PassingDataObject: nmdc:5475a070df52f1702058521b8ebfdd81 +INFO:root:PassingDataObject: nmdc:555814c0b6ca44e02f29d8bcc90b41bc INFO:root:PassingDataObject: nmdc:e986afe1a3c118ea3c98e4915839776a INFO:root:PassingDataObject: nmdc:b52a8ce01e5e3e6ed03ab22e2d7a2bce -INFO:root:PassingDataObject: nmdc:ebe16a3e4d650652f0a39e930872a158 -INFO:root:PassingDataObject: nmdc:555814c0b6ca44e02f29d8bcc90b41bc INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, Annotation Activity for nmdc:mga02p34 -INFO:root:PassingDataObject: nmdc:52b3ef366869a7fc962e3c665fc257ff -INFO:root:PassingDataObject: nmdc:9db873f4b3a9160f8ab2bf4c1ac0d921 +INFO:root:PassingDataObject: nmdc:910f072bd72b9d20b385332929a4a3d7 +INFO:root:PassingDataObject: nmdc:e78e5989d12b059acaf52c24faee7a89 +INFO:root:PassingDataObject: nmdc:6d354ece43c376b66651115ec6016b28 INFO:root:PassingDataObject: nmdc:7192b42dc620ce5f9f80399ae767665b -INFO:root:PassingDataObject: nmdc:36ec2d19c701e968959d478428e07a03 +INFO:root:PassingDataObject: nmdc:7ccb383e1f7cb7e4da4eca5c1330f4b1 +INFO:root:PassingDataObject: nmdc:5787f94387d5d8345d00ad16ced80afe +INFO:root:PassingDataObject: nmdc:aea76ea9592f718fa2e7c2ab2475efc2 INFO:root:PassingDataObject: nmdc:e5b00a076b91743f96f57fc8c4263166 -INFO:root:PassingDataObject: nmdc:542a918f4a84bc4df1c50fe7c511b642 -INFO:root:PassingDataObject: nmdc:05dfd1ef6f25f05bf9d2a1c1234a64ec -INFO:root:PassingDataObject: nmdc:910f072bd72b9d20b385332929a4a3d7 +INFO:root:PassingDataObject: nmdc:52b3ef366869a7fc962e3c665fc257ff INFO:root:PassingDataObject: nmdc:9704a507c5d9c9d6f4dc42bced330344 +INFO:root:PassingDataObject: nmdc:05dfd1ef6f25f05bf9d2a1c1234a64ec +INFO:root:PassingDataObject: nmdc:6695d7f64af5bd1e097c836704890f78 INFO:root:PassingDataObject: nmdc:1f752ce445ebbcf515ae72f56d96b591 -INFO:root:PassingDataObject: nmdc:6d354ece43c376b66651115ec6016b28 -INFO:root:PassingDataObject: nmdc:989ecd70e581f17686f59d0a5234cebc -INFO:root:PassingDataObject: nmdc:5787f94387d5d8345d00ad16ced80afe -INFO:root:PassingDataObject: nmdc:7ccb383e1f7cb7e4da4eca5c1330f4b1 -INFO:root:PassingDataObject: nmdc:e78e5989d12b059acaf52c24faee7a89 INFO:root:PassingDataObject: nmdc:f91be1136a6a514e6502e8ef148235f9 -INFO:root:PassingDataObject: nmdc:6695d7f64af5bd1e097c836704890f78 -INFO:root:PassingDataObject: nmdc:aea76ea9592f718fa2e7c2ab2475efc2 +INFO:root:PassingDataObject: nmdc:36ec2d19c701e968959d478428e07a03 INFO:root:PassingDataObject: nmdc:a293d1b8d5d66ae5db1e668af1bea86a +INFO:root:PassingDataObject: nmdc:542a918f4a84bc4df1c50fe7c511b642 +INFO:root:PassingDataObject: nmdc:989ecd70e581f17686f59d0a5234cebc +INFO:root:PassingDataObject: nmdc:9db873f4b3a9160f8ab2bf4c1ac0d921 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213353 INFO:root:found 1 records INFO:root:record: nmdc:ff77f0ba8f68c8863f2c2743e902e335, MAGs Analysis Activity for nmdc:mga02p34 -INFO:root:PassingDataObject: nmdc:7fd0be50387f67817ba23db7d44ae72b INFO:root:PassingDataObject: nmdc:efeffa2afb26f8f4ddbe80907fa5e19d +INFO:root:PassingDataObject: nmdc:7fd0be50387f67817ba23db7d44ae72b INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213353 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-2bmkj745 INFO:root:legacy_id: gold:Gp0213354 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-2bmkj745 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f2b267f00e22a74e94e6dd75fe0531f0 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213354 INFO:root:found 1 records INFO:root:record: nmdc:ce4f08538d6f705abc1505ed9cc8493b, Read QC Activity for nmdc:mga0c789 -INFO:root:PassingDataObject: nmdc:8489d99afe00144c49dff91e65525ed8 INFO:root:PassingDataObject: nmdc:5055fb882d43f52d949a704b5233660b +INFO:root:PassingDataObject: nmdc:8489d99afe00144c49dff91e65525ed8 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213354 INFO:root:found 1 records INFO:root:record: nmdc:ce4f08538d6f705abc1505ed9cc8493b, ReadBased Analysis Activity for nmdc:mga0c789 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:ce4f08538d6f705abc1505ed9cc8493b -ERROR:root:FailedDataObject: nmdc:de2eae2b7d272b6fe0d83d6c008355d2, -ERROR:root:FailedDataObject: nmdc:f788210bfd7e852cb4927184fd4dc8d0, -ERROR:root:FailedDataObject: nmdc:2886b27c40c1d9df999dee610e6af2b1, -ERROR:root:FailedDataObject: nmdc:581395fa84e118778aab43f9566aa6a3, +INFO:root:PassingDataObject: nmdc:f788210bfd7e852cb4927184fd4dc8d0 +INFO:root:PassingDataObject: nmdc:b49943cbfb6fc32a28b309b59389b68f +INFO:root:PassingDataObject: nmdc:581395fa84e118778aab43f9566aa6a3 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:ce4f08538d6f705abc1505ed9cc8493b -ERROR:root:FailedDataObject: nmdc:b49943cbfb6fc32a28b309b59389b68f, ERROR:root:FailedDataObject: nmdc:c967d1954540c289dc3e177461e16d7c, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:ce4f08538d6f705abc1505ed9cc8493b +ERROR:root:FailedDataObject: nmdc:2886b27c40c1d9df999dee610e6af2b1, ERROR:root:FailedDataObject: nmdc:4362fd4f9f606f1dc4d00776e94ddbeb, +ERROR:root:FailedDataObject: nmdc:de2eae2b7d272b6fe0d83d6c008355d2, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ce4f08538d6f705abc1505ed9cc8493b, ReadBased Analysis Activity for nmdc:mga0c789 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213354 INFO:root:found 1 records INFO:root:record: nmdc:ce4f08538d6f705abc1505ed9cc8493b, Assembly Activity for nmdc:mga0c789 -INFO:root:PassingDataObject: nmdc:f317d8792266dcba89f37e43a9270484 INFO:root:PassingDataObject: nmdc:8d11b47e57ad17ed8afbce02429204fb -INFO:root:PassingDataObject: nmdc:52bcd468266f72732c5f7b07e3e0d353 -INFO:root:PassingDataObject: nmdc:66059c8a9b877afa93d5c74bfc19a9b3 INFO:root:PassingDataObject: nmdc:77e2eafe0f2c9428c9663454add7cfc0 +INFO:root:PassingDataObject: nmdc:f317d8792266dcba89f37e43a9270484 +INFO:root:PassingDataObject: nmdc:66059c8a9b877afa93d5c74bfc19a9b3 +INFO:root:PassingDataObject: nmdc:52bcd468266f72732c5f7b07e3e0d353 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213354 INFO:root:found 1 records INFO:root:record: nmdc:ce4f08538d6f705abc1505ed9cc8493b, Annotation Activity for nmdc:mga0c789 -INFO:root:PassingDataObject: nmdc:fd08e44e17c27ec2d451d18656a18a05 +INFO:root:PassingDataObject: nmdc:8157c46db1c97093cd561e143e188cda INFO:root:PassingDataObject: nmdc:2af9b78550166411c3cc170c13463b13 INFO:root:PassingDataObject: nmdc:0700bf84cf33778f8591d1003c3312b8 -INFO:root:PassingDataObject: nmdc:27b2033d5a4e1f914a8e7099752f34fb -INFO:root:PassingDataObject: nmdc:4231a089544266435b52842030342ee9 -INFO:root:PassingDataObject: nmdc:f3d397822c4951d07199cc70a38ab455 -INFO:root:PassingDataObject: nmdc:eeae40b39f42579da3274b21e423b148 INFO:root:PassingDataObject: nmdc:fd8f9869f040162abe3be2a0931ea88b -INFO:root:PassingDataObject: nmdc:abf6a2aa49be6c826f4c60651fe2493a -INFO:root:PassingDataObject: nmdc:8157c46db1c97093cd561e143e188cda -INFO:root:PassingDataObject: nmdc:1518c8168dd321e1e6208b3a24b592d6 +INFO:root:PassingDataObject: nmdc:e4e120607fbb337a3fe962bd456410b7 +INFO:root:PassingDataObject: nmdc:eeae40b39f42579da3274b21e423b148 INFO:root:PassingDataObject: nmdc:c1c48d264c83a97e87aca3412c44f6d1 +INFO:root:PassingDataObject: nmdc:190f2bfebdbb521874d7c4b4f9be0cde +INFO:root:PassingDataObject: nmdc:9da1dcf78bd972002a0ac6917a262d02 +INFO:root:PassingDataObject: nmdc:f3d397822c4951d07199cc70a38ab455 +INFO:root:PassingDataObject: nmdc:4231a089544266435b52842030342ee9 INFO:root:PassingDataObject: nmdc:3c8209719407a9eb2f46d887351d9b83 -INFO:root:PassingDataObject: nmdc:c8fe2645439eae51e07ab2e88c07a18a +INFO:root:PassingDataObject: nmdc:abf6a2aa49be6c826f4c60651fe2493a +INFO:root:PassingDataObject: nmdc:fd08e44e17c27ec2d451d18656a18a05 +INFO:root:PassingDataObject: nmdc:1518c8168dd321e1e6208b3a24b592d6 INFO:root:PassingDataObject: nmdc:720721b0d110f0b543043148994d0ab2 -INFO:root:PassingDataObject: nmdc:e4e120607fbb337a3fe962bd456410b7 -INFO:root:PassingDataObject: nmdc:9da1dcf78bd972002a0ac6917a262d02 +INFO:root:PassingDataObject: nmdc:c8fe2645439eae51e07ab2e88c07a18a INFO:root:PassingDataObject: nmdc:16bdc186788be6fc71187b4aaaf4bae0 -INFO:root:PassingDataObject: nmdc:190f2bfebdbb521874d7c4b4f9be0cde +INFO:root:PassingDataObject: nmdc:27b2033d5a4e1f914a8e7099752f34fb INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213354 INFO:root:found 1 records INFO:root:record: nmdc:ce4f08538d6f705abc1505ed9cc8493b, MAGs Analysis Activity for nmdc:mga0c789 INFO:root:PassingDataObject: nmdc:4648a97ebffa110622adbf270658b17c INFO:root:PassingDataObject: nmdc:4c0551ad60b6d2507598fce74e719f5f INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213354 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-s8v93g59 INFO:root:legacy_id: gold:Gp0213356 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-s8v93g59 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9a37ea20e51282596cf799605d6e912c INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, Read QC Activity for nmdc:mga01k42 INFO:root:PassingDataObject: nmdc:fac6c0329d3d2dbecb4f4537de15c65b INFO:root:PassingDataObject: nmdc:ecbf0512652b4a76930b42338fe069a6 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, ReadBased Analysis Activity for nmdc:mga01k42 -INFO:root:PassingDataObject: nmdc:5d9289f68e03bcf582229ef6a5ea0a67 -INFO:root:PassingDataObject: nmdc:13fcb7a41f5d14f84ecdafee883857ca -INFO:root:PassingDataObject: nmdc:f8868d11a879f275d4d6143bf7cd1c65 -INFO:root:PassingDataObject: nmdc:32787a13d8fe71997023f82eee110dbd -INFO:root:PassingDataObject: nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 -INFO:root:PassingDataObject: nmdc:61d1f1838d983c1d5ac232440460893c INFO:root:PassingDataObject: nmdc:1dd5ec7ab305465deb9f38689a320709 +INFO:root:PassingDataObject: nmdc:13fcb7a41f5d14f84ecdafee883857ca INFO:root:PassingDataObject: nmdc:80ec1cca49e6f46f5441f778d39334a7 +INFO:root:PassingDataObject: nmdc:5d9289f68e03bcf582229ef6a5ea0a67 +INFO:root:PassingDataObject: nmdc:32787a13d8fe71997023f82eee110dbd INFO:root:PassingDataObject: nmdc:aa219ce5583bc97f9e9bf1df90f0966e +INFO:root:PassingDataObject: nmdc:61d1f1838d983c1d5ac232440460893c +INFO:root:PassingDataObject: nmdc:f8868d11a879f275d4d6143bf7cd1c65 +INFO:root:PassingDataObject: nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, Assembly Activity for nmdc:mga01k42 +INFO:root:PassingDataObject: nmdc:774ba656ecf709dc459f44979b1b4f65 INFO:root:PassingDataObject: nmdc:4fa9ad423eab6ca57746d536c3da9d9c -INFO:root:PassingDataObject: nmdc:1eb1559a69b20af687e645bd94e28602 INFO:root:PassingDataObject: nmdc:595450b1e3ef7af7796b1c8d3c42e37c -INFO:root:PassingDataObject: nmdc:774ba656ecf709dc459f44979b1b4f65 INFO:root:PassingDataObject: nmdc:4daeb929d6c8b2a7068455a5484a14aa +INFO:root:PassingDataObject: nmdc:1eb1559a69b20af687e645bd94e28602 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, Annotation Activity for nmdc:mga01k42 +INFO:root:PassingDataObject: nmdc:626bb035d5e6211c1ee494297d725413 +INFO:root:PassingDataObject: nmdc:d644b085699536660a66dac0e7759f00 +INFO:root:PassingDataObject: nmdc:e08b376d25f28f2fa5063a95e16f0deb INFO:root:PassingDataObject: nmdc:7df1d1d35c73a0a62df6637bbde500b8 -INFO:root:PassingDataObject: nmdc:6e1939e22571b824045439560c0dc784 -INFO:root:PassingDataObject: nmdc:90c9f30e1cc84581dc770b1480274cad -INFO:root:PassingDataObject: nmdc:d94f3d5776cbd63bc4c6486e989a3d1c -INFO:root:PassingDataObject: nmdc:aeac6f402d816cb8ea52cc5af209963a -INFO:root:PassingDataObject: nmdc:eebb2029252847f85585d52d222d776d -INFO:root:PassingDataObject: nmdc:0d6d70b4259b1ecbd2f62dded2438bb9 -INFO:root:PassingDataObject: nmdc:81407b00530f0ac59b20b1c37a161a54 INFO:root:PassingDataObject: nmdc:c7d24366091fafc178f1840e3dd8627f -INFO:root:PassingDataObject: nmdc:96d8fcf8e87a8b7a5c36297099bbf051 -INFO:root:PassingDataObject: nmdc:862de3838361963dd03b15cad155858a -INFO:root:PassingDataObject: nmdc:24c39782be97b2cc289e6c736c72c1e9 INFO:root:PassingDataObject: nmdc:f483c0e23bb4417b0483e2243d1b6bc6 -INFO:root:PassingDataObject: nmdc:626bb035d5e6211c1ee494297d725413 +INFO:root:PassingDataObject: nmdc:81407b00530f0ac59b20b1c37a161a54 INFO:root:PassingDataObject: nmdc:3ab3b0687cfdf6b6ed242d51173baffb -INFO:root:PassingDataObject: nmdc:e08b376d25f28f2fa5063a95e16f0deb -INFO:root:PassingDataObject: nmdc:a8812efcfaa033b37c560510e5f5624b +INFO:root:PassingDataObject: nmdc:862de3838361963dd03b15cad155858a +INFO:root:PassingDataObject: nmdc:eebb2029252847f85585d52d222d776d +INFO:root:PassingDataObject: nmdc:d94f3d5776cbd63bc4c6486e989a3d1c +INFO:root:PassingDataObject: nmdc:96d8fcf8e87a8b7a5c36297099bbf051 INFO:root:PassingDataObject: nmdc:7be52e1d3dcb7fb45879e0f316471344 -INFO:root:PassingDataObject: nmdc:d644b085699536660a66dac0e7759f00 +INFO:root:PassingDataObject: nmdc:0d6d70b4259b1ecbd2f62dded2438bb9 +INFO:root:PassingDataObject: nmdc:aeac6f402d816cb8ea52cc5af209963a +INFO:root:PassingDataObject: nmdc:90c9f30e1cc84581dc770b1480274cad +INFO:root:PassingDataObject: nmdc:24c39782be97b2cc289e6c736c72c1e9 +INFO:root:PassingDataObject: nmdc:a8812efcfaa033b37c560510e5f5624b +INFO:root:PassingDataObject: nmdc:6e1939e22571b824045439560c0dc784 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213356 INFO:root:found 1 records INFO:root:record: nmdc:bcb23daa73fecf814f1c090e7c42d382, MAGs Analysis Activity for nmdc:mga01k42 -INFO:root:PassingDataObject: nmdc:86a96ff6822f782520b87ab151d06c37 INFO:root:PassingDataObject: nmdc:77008418b513dec840ec7f8e4171c5d5 +INFO:root:PassingDataObject: nmdc:86a96ff6822f782520b87ab151d06c37 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213356 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-3q02ny85 INFO:root:legacy_id: gold:Gp0213355 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-3q02ny85 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a68418156612ccea5ffa4c2d9b6a6114 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213355 INFO:root:found 1 records INFO:root:record: nmdc:cddfe7e84d03fedd2eac57a64a6b02d8, Read QC Activity for nmdc:mga0t221 -INFO:root:PassingDataObject: nmdc:e7b70f32c6453eeaa76148503d947956 INFO:root:PassingDataObject: nmdc:1e4cc4c19106a72aaac4c83cf4a2a286 +INFO:root:PassingDataObject: nmdc:e7b70f32c6453eeaa76148503d947956 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213355 INFO:root:found 1 records INFO:root:record: nmdc:cddfe7e84d03fedd2eac57a64a6b02d8, ReadBased Analysis Activity for nmdc:mga0t221 -INFO:root:PassingDataObject: nmdc:3302d9463d73c2f5b56077476d3072d4 +INFO:root:PassingDataObject: nmdc:8b3bbea86a89750d04e296d2ca7516a0 +INFO:root:PassingDataObject: nmdc:749a526680822969a72c2bdefc934870 INFO:root:PassingDataObject: nmdc:0fa137a7216d90e9b548ad023fde787a INFO:root:PassingDataObject: nmdc:f3b9b92b02d84dcaa6c1c2f9da9aa5e2 INFO:root:PassingDataObject: nmdc:edf382163c1e19d7e44a5e76b78ed37d -INFO:root:PassingDataObject: nmdc:749a526680822969a72c2bdefc934870 -INFO:root:PassingDataObject: nmdc:8b3bbea86a89750d04e296d2ca7516a0 INFO:root:PassingDataObject: nmdc:45a7b29cf3507c83dd6cb7391ae325a1 INFO:root:PassingDataObject: nmdc:4fbea941838df056f23d2f5e5e623fa8 +INFO:root:PassingDataObject: nmdc:3302d9463d73c2f5b56077476d3072d4 INFO:root:PassingDataObject: nmdc:18b9a6ae7e24472c382475d68e148242 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213355 INFO:root:found 1 records INFO:root:record: nmdc:cddfe7e84d03fedd2eac57a64a6b02d8, Assembly Activity for nmdc:mga0t221 -INFO:root:PassingDataObject: nmdc:93d97ed02fab960bdaa49abd9ab61861 -INFO:root:PassingDataObject: nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 INFO:root:PassingDataObject: nmdc:d3abff3c9b8c81420662e2191a19a49e +INFO:root:PassingDataObject: nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 +INFO:root:PassingDataObject: nmdc:93d97ed02fab960bdaa49abd9ab61861 INFO:root:PassingDataObject: nmdc:290dacce7b0033b70ac3d9ee81ebe834 INFO:root:PassingDataObject: nmdc:75ad27df82034cd6dc438d12a13127d4 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213355 INFO:root:found 1 records INFO:root:record: nmdc:cddfe7e84d03fedd2eac57a64a6b02d8, Annotation Activity for nmdc:mga0t221 -INFO:root:PassingDataObject: nmdc:bef7a1477244b9d90af5d69215e73eeb +INFO:root:PassingDataObject: nmdc:3002a8e82cc34a6466ff90b02d6cbf5c +INFO:root:PassingDataObject: nmdc:814446e5b5cf8e08915912dec586ccfe INFO:root:PassingDataObject: nmdc:d41e7cbcb83bd6c83a261151cb6d7636 -INFO:root:PassingDataObject: nmdc:1af7d2752bd4c57b10fff1eccd0acc45 INFO:root:PassingDataObject: nmdc:2203d72ff2a2688eea4a19cea4f0f4ca +INFO:root:PassingDataObject: nmdc:bef7a1477244b9d90af5d69215e73eeb INFO:root:PassingDataObject: nmdc:de04843a640451de8fe9f3c21f42194f +INFO:root:PassingDataObject: nmdc:b93c9304a42e350964441098811d839d INFO:root:PassingDataObject: nmdc:3700cd2e6dc2e2bf542f6d7a0e6e5e6a -INFO:root:PassingDataObject: nmdc:bd528a5e70d507669e1d7b11990dd9fa INFO:root:PassingDataObject: nmdc:da7d2bd95093ddc15abad482ea4f5007 -INFO:root:PassingDataObject: nmdc:814446e5b5cf8e08915912dec586ccfe -INFO:root:PassingDataObject: nmdc:f35026920a2f5acc9bc9db006c634375 INFO:root:PassingDataObject: nmdc:7d4f744d22a2408341e40e6623b0b047 -INFO:root:PassingDataObject: nmdc:b93c9304a42e350964441098811d839d -INFO:root:PassingDataObject: nmdc:bf566464a721cfe76dc80f682286f336 -INFO:root:PassingDataObject: nmdc:3002a8e82cc34a6466ff90b02d6cbf5c -INFO:root:PassingDataObject: nmdc:9a1e2587991ba7218d68f00c5c0a2a84 INFO:root:PassingDataObject: nmdc:abf1547dafd822bbdca71d5b9e8a7779 +INFO:root:PassingDataObject: nmdc:f35026920a2f5acc9bc9db006c634375 INFO:root:PassingDataObject: nmdc:970e23c414e1529eed80909c5f38254c +INFO:root:PassingDataObject: nmdc:bf566464a721cfe76dc80f682286f336 INFO:root:PassingDataObject: nmdc:ac2d23ee1bb84d0f42904dbecb63fe1f +INFO:root:PassingDataObject: nmdc:bd528a5e70d507669e1d7b11990dd9fa +INFO:root:PassingDataObject: nmdc:1af7d2752bd4c57b10fff1eccd0acc45 INFO:root:PassingDataObject: nmdc:143a8686046c518b0f893eb608e4329f +INFO:root:PassingDataObject: nmdc:9a1e2587991ba7218d68f00c5c0a2a84 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213355 INFO:root:found 1 records INFO:root:record: nmdc:cddfe7e84d03fedd2eac57a64a6b02d8, MAGs Analysis Activity for nmdc:mga0t221 INFO:root:PassingDataObject: nmdc:e826395b76b4771b8a3e04dcb8417fb8 INFO:root:PassingDataObject: nmdc:09f3f72da61063fbce3eb3eef95c9d6c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213355 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-31w8s533 INFO:root:legacy_id: gold:Gp0213359 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-31w8s533 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:dbfdeaccbb5b01e4b567e04c1ec60b95 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, Read QC Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:8e14de4ed6b5106872fece8bc56520b5 INFO:root:PassingDataObject: nmdc:e5639bbf52ada23bc315b10c45359dfb +INFO:root:PassingDataObject: nmdc:8e14de4ed6b5106872fece8bc56520b5 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, ReadBased Analysis Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:51543082d5583142714c723f25c0ae59 -INFO:root:PassingDataObject: nmdc:d94744351cc7d750b4c9c8e97c73b3d4 -INFO:root:PassingDataObject: nmdc:eac79277f377bf43c195f0c79e7845a8 -INFO:root:PassingDataObject: nmdc:c9f07e15d6c51bfe3c390a0287fc64c6 INFO:root:PassingDataObject: nmdc:5eb6a360229b07828652233cdf79b789 INFO:root:PassingDataObject: nmdc:c9014a78668556a1203cf95cca1cfb1c -INFO:root:PassingDataObject: nmdc:782c9ce36f94f7d5e8da1f080a844cae INFO:root:PassingDataObject: nmdc:1daaf5390937d482524357e452c0b284 +INFO:root:PassingDataObject: nmdc:d94744351cc7d750b4c9c8e97c73b3d4 +INFO:root:PassingDataObject: nmdc:51543082d5583142714c723f25c0ae59 +INFO:root:PassingDataObject: nmdc:c9f07e15d6c51bfe3c390a0287fc64c6 +INFO:root:PassingDataObject: nmdc:782c9ce36f94f7d5e8da1f080a844cae +INFO:root:PassingDataObject: nmdc:eac79277f377bf43c195f0c79e7845a8 INFO:root:PassingDataObject: nmdc:dd142d29a7556780b70685ff50e64ddd INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, Assembly Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:4b2bc0938d8a400158b4888cb7acafd0 INFO:root:PassingDataObject: nmdc:98501ed7ca9dcaa374798de03ddee2d6 +INFO:root:PassingDataObject: nmdc:7b981760a9a92bd4124de889bfba2771 INFO:root:PassingDataObject: nmdc:cd5b242cdd8c14516f87f7d5ad6c75e3 +INFO:root:PassingDataObject: nmdc:4b2bc0938d8a400158b4888cb7acafd0 INFO:root:PassingDataObject: nmdc:65ad1bfe5efd2930e32ae347949ff099 -INFO:root:PassingDataObject: nmdc:7b981760a9a92bd4124de889bfba2771 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, Annotation Activity for nmdc:mga0jc80 -INFO:root:PassingDataObject: nmdc:2e17da9c98a1ba15668caec1c7f1a3bc -INFO:root:PassingDataObject: nmdc:63e4c58a0f022ea93b135816de2fe36a -INFO:root:PassingDataObject: nmdc:4701d35661f6a9ba5b1667353c21e987 -INFO:root:PassingDataObject: nmdc:3c27cbd8f990e84323588c1bec62bc95 INFO:root:PassingDataObject: nmdc:9750722937c36ec107b30a0c17fad191 -INFO:root:PassingDataObject: nmdc:ee64bb5a4fd01da71a9accf9074494c6 -INFO:root:PassingDataObject: nmdc:ce2c6fb662c073862e6dd0aef84b11ae +INFO:root:PassingDataObject: nmdc:78dce331feae8f60674fdb4c4ed81933 INFO:root:PassingDataObject: nmdc:91219c706c5f1ec05760126b4f2c4e3c -INFO:root:PassingDataObject: nmdc:24bcf62079f9c9950847fd36ca40c5a8 -INFO:root:PassingDataObject: nmdc:8d9d43ee5c2a9a5dc954d63a5b3b1bb8 +INFO:root:PassingDataObject: nmdc:ce2c6fb662c073862e6dd0aef84b11ae +INFO:root:PassingDataObject: nmdc:3c27cbd8f990e84323588c1bec62bc95 +INFO:root:PassingDataObject: nmdc:2e17da9c98a1ba15668caec1c7f1a3bc +INFO:root:PassingDataObject: nmdc:ee64bb5a4fd01da71a9accf9074494c6 +INFO:root:PassingDataObject: nmdc:63e4c58a0f022ea93b135816de2fe36a INFO:root:PassingDataObject: nmdc:6606e19ee775ed9df8875bdbc7722ec9 -INFO:root:PassingDataObject: nmdc:a2d99d8198b49ec7c2508dd11c92409f -INFO:root:PassingDataObject: nmdc:78dce331feae8f60674fdb4c4ed81933 -INFO:root:PassingDataObject: nmdc:b372d961972736b8502d885105b5da2e -INFO:root:PassingDataObject: nmdc:ecb1cfdead48a8ad87584225ad41d33e INFO:root:PassingDataObject: nmdc:7c54b39bfd6849db1d7fb433b5e61670 +INFO:root:PassingDataObject: nmdc:158c2160423fb114a01a9d0a1eda73f3 +INFO:root:PassingDataObject: nmdc:b372d961972736b8502d885105b5da2e +INFO:root:PassingDataObject: nmdc:a2d99d8198b49ec7c2508dd11c92409f INFO:root:PassingDataObject: nmdc:c9787e886faba600a35cad60366057fa +INFO:root:PassingDataObject: nmdc:24bcf62079f9c9950847fd36ca40c5a8 +INFO:root:PassingDataObject: nmdc:4701d35661f6a9ba5b1667353c21e987 +INFO:root:PassingDataObject: nmdc:8d9d43ee5c2a9a5dc954d63a5b3b1bb8 INFO:root:PassingDataObject: nmdc:4394506264cf973cba212939dd41f452 -INFO:root:PassingDataObject: nmdc:158c2160423fb114a01a9d0a1eda73f3 +INFO:root:PassingDataObject: nmdc:ecb1cfdead48a8ad87584225ad41d33e INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213359 INFO:root:found 1 records INFO:root:record: nmdc:f881bb4b70fb1271442006a03252de42, MAGs Analysis Activity for nmdc:mga0jc80 INFO:root:PassingDataObject: nmdc:68a18086f2dea579fff2fde349fef30c INFO:root:PassingDataObject: nmdc:41d1a5004ed82f18792e30f108b8aad3 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213359 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-pjs63190 INFO:root:legacy_id: gold:Gp0213369 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-pjs63190 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2437e48c81f26729595351c727f94b0b INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, Read QC Activity for nmdc:mga0qn58 -INFO:root:PassingDataObject: nmdc:2ffb83977e0251de1215c15725b707af INFO:root:PassingDataObject: nmdc:cc0272c1e6efdd2134e32d05081af9c6 +INFO:root:PassingDataObject: nmdc:2ffb83977e0251de1215c15725b707af INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, ReadBased Analysis Activity for nmdc:mga0qn58 +INFO:root:PassingDataObject: nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce INFO:root:PassingDataObject: nmdc:41c4bbd0be4113dffbb442ab0f3e309b -INFO:root:PassingDataObject: nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 -INFO:root:PassingDataObject: nmdc:62dfa71b652641a0ff8b3df2a6b888bb +INFO:root:PassingDataObject: nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 INFO:root:PassingDataObject: nmdc:e9bf0f6d2656616f08d44ea74d3037f3 +INFO:root:PassingDataObject: nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 +INFO:root:PassingDataObject: nmdc:e2a5c750201b5f5f5f7a14038aec540e INFO:root:PassingDataObject: nmdc:fec6a6cd5c7c52b4a925bab8656402e9 INFO:root:PassingDataObject: nmdc:6b6a54c1c9528598d4b7271280fb3a62 -INFO:root:PassingDataObject: nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 -INFO:root:PassingDataObject: nmdc:e2a5c750201b5f5f5f7a14038aec540e -INFO:root:PassingDataObject: nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce +INFO:root:PassingDataObject: nmdc:62dfa71b652641a0ff8b3df2a6b888bb INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, Assembly Activity for nmdc:mga0qn58 -INFO:root:PassingDataObject: nmdc:b701b1436f30f504c50c4effdceb5904 INFO:root:PassingDataObject: nmdc:ea286f9c66a89fd51e43db2aefa7c6c6 +INFO:root:PassingDataObject: nmdc:b701b1436f30f504c50c4effdceb5904 INFO:root:PassingDataObject: nmdc:e3f1be6f767137fa782d673e325d8c31 -INFO:root:PassingDataObject: nmdc:3d0b930e87f60cc176d4df3eee15d3d8 INFO:root:PassingDataObject: nmdc:719666ff80b27a20d42663db3a0a45da +INFO:root:PassingDataObject: nmdc:3d0b930e87f60cc176d4df3eee15d3d8 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, Annotation Activity for nmdc:mga0qn58 -INFO:root:PassingDataObject: nmdc:e7580ac9ef99b9bdc1f55e69da44c8ab -INFO:root:PassingDataObject: nmdc:52869fefcaad32e0dfcb63ad9bb4651a -INFO:root:PassingDataObject: nmdc:a56d9547d6409bba36db8aa9d116f5da -INFO:root:PassingDataObject: nmdc:5e002d5aa14a699a899764146d967262 -INFO:root:PassingDataObject: nmdc:ea8d50ebb448cd771ac8e6633df15046 -INFO:root:PassingDataObject: nmdc:925497624e4f678ef4fac4a67ae9f4c7 INFO:root:PassingDataObject: nmdc:f2676a56f8b31325ec9421481f02ec41 -INFO:root:PassingDataObject: nmdc:8d04b48fcde4ac1169fdf1c65449d985 +INFO:root:PassingDataObject: nmdc:c6841892dbb0b8444c07702d83804589 +INFO:root:PassingDataObject: nmdc:443d4ce8327a3be67e0469cf4f5b4dea INFO:root:PassingDataObject: nmdc:a08fa33cbca9f2c35b22887c5bac3a32 -INFO:root:PassingDataObject: nmdc:01b2388cd826d6a7708a4331b3d81809 +INFO:root:PassingDataObject: nmdc:5e002d5aa14a699a899764146d967262 INFO:root:PassingDataObject: nmdc:4f1f24ddddb6cbcde673fbe9e0104835 +INFO:root:PassingDataObject: nmdc:a56d9547d6409bba36db8aa9d116f5da INFO:root:PassingDataObject: nmdc:cab50730f3ee5603975bdf2fded37a22 -INFO:root:PassingDataObject: nmdc:ccc09fc10a1b10b964cb956c4f6b1339 -INFO:root:PassingDataObject: nmdc:c6841892dbb0b8444c07702d83804589 -INFO:root:PassingDataObject: nmdc:270f5c396397a35058e54e8d0adc7f4c -INFO:root:PassingDataObject: nmdc:8fdaa31b128929dfdce099037f3ed04f INFO:root:PassingDataObject: nmdc:4635d194b12e8a9d46fbdc3bb497d219 -INFO:root:PassingDataObject: nmdc:443d4ce8327a3be67e0469cf4f5b4dea +INFO:root:PassingDataObject: nmdc:8d04b48fcde4ac1169fdf1c65449d985 +INFO:root:PassingDataObject: nmdc:270f5c396397a35058e54e8d0adc7f4c INFO:root:PassingDataObject: nmdc:c2edf53bca26a65a6107b6e368270c2c +INFO:root:PassingDataObject: nmdc:ea8d50ebb448cd771ac8e6633df15046 +INFO:root:PassingDataObject: nmdc:925497624e4f678ef4fac4a67ae9f4c7 +INFO:root:PassingDataObject: nmdc:e7580ac9ef99b9bdc1f55e69da44c8ab +INFO:root:PassingDataObject: nmdc:8fdaa31b128929dfdce099037f3ed04f +INFO:root:PassingDataObject: nmdc:ccc09fc10a1b10b964cb956c4f6b1339 +INFO:root:PassingDataObject: nmdc:01b2388cd826d6a7708a4331b3d81809 +INFO:root:PassingDataObject: nmdc:52869fefcaad32e0dfcb63ad9bb4651a INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213369 INFO:root:found 1 records INFO:root:record: nmdc:21d73d2d997cab86c64a915ff5b2983d, MAGs Analysis Activity for nmdc:mga0qn58 -INFO:root:PassingDataObject: nmdc:232c0e167a18c9ec35544c9e9dca913e INFO:root:PassingDataObject: nmdc:5eefdd8d0733cee1f7d5b95d4c3b893c +INFO:root:PassingDataObject: nmdc:232c0e167a18c9ec35544c9e9dca913e INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213369 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-h63w0665 INFO:root:legacy_id: gold:Gp0213360 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-h63w0665 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:989711381573525c3c32f77fb8b4bcf7 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, Read QC Activity for nmdc:mga0mc82 INFO:root:PassingDataObject: nmdc:3516d985a9c9d91a8990c3ee286a30c7 INFO:root:PassingDataObject: nmdc:60057503ef107ce2ae3fa46853481d79 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, ReadBased Analysis Activity for nmdc:mga0mc82 -ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:2e384ea11627508ae28658217bdfe3b3 -ERROR:root:FailedDataObject: nmdc:355ed122ebfedeb97b9039f53071fb32, -ERROR:root:FailedDataObject: nmdc:6f9ae6d9e35c2712e42be1c5e1a220c0, -ERROR:root:FailedDataObject: nmdc:824aec1509237ed08980524f83195790, -ERROR:root:FailedDataObject: nmdc:d7b6407a6cf90e8632a041613ba7af7a, -ERROR:root:FailedDataObject: nmdc:f5100b64e33408b5cc4392519c64659b, -ERROR:root:FailedDataObject: nmdc:7cbf5868b5d3d30f8dd8bab089523082, +INFO:root:PassingDataObject: nmdc:6f9ae6d9e35c2712e42be1c5e1a220c0 +INFO:root:PassingDataObject: nmdc:d7b6407a6cf90e8632a041613ba7af7a +INFO:root:PassingDataObject: nmdc:7cbf5868b5d3d30f8dd8bab089523082 +INFO:root:PassingDataObject: nmdc:355ed122ebfedeb97b9039f53071fb32 ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadbasedAnalysis/nmdc:2e384ea11627508ae28658217bdfe3b3 ERROR:root:FailedDataObject: nmdc:5fecd27babb34be50e875bdac6ee440e, +ERROR:root:FailedDataObject: nmdc:824aec1509237ed08980524f83195790, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadbasedAnalysis/nmdc:2e384ea11627508ae28658217bdfe3b3 +ERROR:root:FailedDataObject: nmdc:f5100b64e33408b5cc4392519c64659b, ERROR:root:failing_data_objects: 7 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2e384ea11627508ae28658217bdfe3b3, ReadBased Analysis Activity for nmdc:mga0mc82 ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, Assembly Activity for nmdc:mga0mc82 +INFO:root:PassingDataObject: nmdc:c66004718621b2127afcba96ee230ddf INFO:root:PassingDataObject: nmdc:2d2f4eac3e8138a1b6d25a1b576d5745 INFO:root:PassingDataObject: nmdc:6f633eb389d3e3ec440533279471a633 INFO:root:PassingDataObject: nmdc:7bef881cb661e723a7851e58e8c18748 -INFO:root:PassingDataObject: nmdc:c66004718621b2127afcba96ee230ddf INFO:root:PassingDataObject: nmdc:e62e7b70866da3b4e75dabd7401c3b7e INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, Annotation Activity for nmdc:mga0mc82 INFO:root:PassingDataObject: nmdc:82fb835883329b1e2fd82ae0f79203bc -INFO:root:PassingDataObject: nmdc:cfb4663de8041b16b29ab770d4b06989 -INFO:root:PassingDataObject: nmdc:d9789dd7c1613d628537370b654289cb -INFO:root:PassingDataObject: nmdc:0a0434e3ad6406cc46ead13d0f778d70 -INFO:root:PassingDataObject: nmdc:13c8ec0c4cd5b85afefb9e7a0e3d268e -INFO:root:PassingDataObject: nmdc:a0e4943260bb1162c39f41f4eb4ec238 INFO:root:PassingDataObject: nmdc:67a79992152df526d4b4390ca7744bb5 -INFO:root:PassingDataObject: nmdc:5b0e42a2aa2f34793be303afe0f99e6d -INFO:root:PassingDataObject: nmdc:32722e1d4071c12311551275abb12b73 +INFO:root:PassingDataObject: nmdc:a0e4943260bb1162c39f41f4eb4ec238 +INFO:root:PassingDataObject: nmdc:a59619a7e9634c4e56a264c04902f437 INFO:root:PassingDataObject: nmdc:e13505ce64ef8230d1a203b09762a36e -INFO:root:PassingDataObject: nmdc:d05d0c22451f3c92c282d1e52af82a8c +INFO:root:PassingDataObject: nmdc:0f163af7fd3d6ed5e54b9977558af2e1 +INFO:root:PassingDataObject: nmdc:eb48bdac59936dcc5376e2cce7f14225 +INFO:root:PassingDataObject: nmdc:0a0434e3ad6406cc46ead13d0f778d70 +INFO:root:PassingDataObject: nmdc:5b0e42a2aa2f34793be303afe0f99e6d INFO:root:PassingDataObject: nmdc:e0cadba3af3652f564f481953a11a45b +INFO:root:PassingDataObject: nmdc:13c8ec0c4cd5b85afefb9e7a0e3d268e +INFO:root:PassingDataObject: nmdc:0fc83b831f52aaf6d08edb1b6f8ee3c7 INFO:root:PassingDataObject: nmdc:52e45dc9dd75627392572deabb21f93c -INFO:root:PassingDataObject: nmdc:a59619a7e9634c4e56a264c04902f437 -INFO:root:PassingDataObject: nmdc:2a4acda53d0fbd2adc7367382e621657 +INFO:root:PassingDataObject: nmdc:32722e1d4071c12311551275abb12b73 INFO:root:PassingDataObject: nmdc:d7a6032065fbe57d3c82adb29c494a84 -INFO:root:PassingDataObject: nmdc:eb48bdac59936dcc5376e2cce7f14225 -INFO:root:PassingDataObject: nmdc:0f163af7fd3d6ed5e54b9977558af2e1 -INFO:root:PassingDataObject: nmdc:0fc83b831f52aaf6d08edb1b6f8ee3c7 +INFO:root:PassingDataObject: nmdc:d9789dd7c1613d628537370b654289cb +INFO:root:PassingDataObject: nmdc:2a4acda53d0fbd2adc7367382e621657 +INFO:root:PassingDataObject: nmdc:cfb4663de8041b16b29ab770d4b06989 +INFO:root:PassingDataObject: nmdc:d05d0c22451f3c92c282d1e52af82a8c INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213360 INFO:root:found 1 records INFO:root:record: nmdc:2e384ea11627508ae28658217bdfe3b3, MAGs Analysis Activity for nmdc:mga0mc82 INFO:root:PassingDataObject: nmdc:977e030147ab8ed322346e6c6d512aa4 INFO:root:PassingDataObject: nmdc:ab7b2f5ba894bf5699721ef7000e1265 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213360 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-9mhqsm53 INFO:root:legacy_id: gold:Gp0213361 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9mhqsm53 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8139981465fa40b6488805919efdbcd6 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, Read QC Activity for nmdc:mga0s996 INFO:root:PassingDataObject: nmdc:0c3a86b1ffa0fb1ede94b75ce78e6573 INFO:root:PassingDataObject: nmdc:ed5b50999ee0058ab9331a6ddb7fbf0a INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, ReadBased Analysis Activity for nmdc:mga0s996 INFO:root:PassingDataObject: nmdc:e904b455b89d83441fd6a5d4ceec8f07 INFO:root:PassingDataObject: nmdc:c28210f3071feeb1b190c2419ba39fd1 INFO:root:PassingDataObject: nmdc:68d3e76cd0e9dc8f1d9e5222d9ba3e4f -INFO:root:PassingDataObject: nmdc:54d8452e9d66b0cd889e24b258f89a40 -INFO:root:PassingDataObject: nmdc:52be54f58b105b1b32e97eb7e79b024e -INFO:root:PassingDataObject: nmdc:980c2b734fe7f0949c431109ba0bc757 -INFO:root:PassingDataObject: nmdc:225829fc2562b2b761aab02e1fdfd752 INFO:root:PassingDataObject: nmdc:92f6a01b60199cdd659291e6b69f2ca9 +INFO:root:PassingDataObject: nmdc:225829fc2562b2b761aab02e1fdfd752 +INFO:root:PassingDataObject: nmdc:52be54f58b105b1b32e97eb7e79b024e INFO:root:PassingDataObject: nmdc:12de38964eda24a7d5ec260beb1584a5 +INFO:root:PassingDataObject: nmdc:54d8452e9d66b0cd889e24b258f89a40 +INFO:root:PassingDataObject: nmdc:980c2b734fe7f0949c431109ba0bc757 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, Assembly Activity for nmdc:mga0s996 INFO:root:PassingDataObject: nmdc:8f889179bcb6e0d10554668e2a6602c0 INFO:root:PassingDataObject: nmdc:4560c4ae0d6c207d46823433078d6454 INFO:root:PassingDataObject: nmdc:c014933ebb8bec7bfce37f700dbe8618 -INFO:root:PassingDataObject: nmdc:173d4154bb8b27c533dc27c574ba9d9b INFO:root:PassingDataObject: nmdc:33ff2f01caa73fd559b8d9e4eeb5928a +INFO:root:PassingDataObject: nmdc:173d4154bb8b27c533dc27c574ba9d9b INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, Annotation Activity for nmdc:mga0s996 -INFO:root:PassingDataObject: nmdc:4482bacc24d8e083d17eea26353f0d09 -INFO:root:PassingDataObject: nmdc:28a16403d9ec12644ba6b9e2c58efece +INFO:root:PassingDataObject: nmdc:567bd3335a80092342397ade9b78c856 +INFO:root:PassingDataObject: nmdc:22c62be9c224efc91a90c6513d5f5fa6 +INFO:root:PassingDataObject: nmdc:5a0ce24d15529cff9b6911bd504121bc +INFO:root:PassingDataObject: nmdc:f5a279f221e3d7171aa016ffc5c7bf61 INFO:root:PassingDataObject: nmdc:71268c59bb4c4b7cc11bfe240d4ad060 -INFO:root:PassingDataObject: nmdc:ae7b0d31bada0df5fe26c437dd422746 -INFO:root:PassingDataObject: nmdc:1a4cf74d56f117e2e1ce87fb5ee9998d +INFO:root:PassingDataObject: nmdc:cd79810b9032daa84898644780349ee7 +INFO:root:PassingDataObject: nmdc:69c22cf1e22a13a0894180d3ef7308c3 +INFO:root:PassingDataObject: nmdc:28a16403d9ec12644ba6b9e2c58efece +INFO:root:PassingDataObject: nmdc:abc79038b9f77c03464839b348551f8f +INFO:root:PassingDataObject: nmdc:0d8cc7e6a917b54d2820951ddc4a5202 +INFO:root:PassingDataObject: nmdc:825133b286c4e8846eda5207eeefd7fa +INFO:root:PassingDataObject: nmdc:0dfa7d9e028c6bfac439171a2c17fe69 INFO:root:PassingDataObject: nmdc:a8e35d784f823eb0ee2ad84e9389aa63 -INFO:root:PassingDataObject: nmdc:5a0ce24d15529cff9b6911bd504121bc INFO:root:PassingDataObject: nmdc:9bf7da984af47d3d2cacd3f63359ebc7 +INFO:root:PassingDataObject: nmdc:1a4cf74d56f117e2e1ce87fb5ee9998d +INFO:root:PassingDataObject: nmdc:ae7b0d31bada0df5fe26c437dd422746 INFO:root:PassingDataObject: nmdc:6cd4b13d54e6c105aaed68431558d9db +INFO:root:PassingDataObject: nmdc:4482bacc24d8e083d17eea26353f0d09 INFO:root:PassingDataObject: nmdc:d1cf6d8920ac367148615b3e2c52d1a1 -INFO:root:PassingDataObject: nmdc:22c62be9c224efc91a90c6513d5f5fa6 -INFO:root:PassingDataObject: nmdc:0dfa7d9e028c6bfac439171a2c17fe69 -INFO:root:PassingDataObject: nmdc:825133b286c4e8846eda5207eeefd7fa -INFO:root:PassingDataObject: nmdc:cd79810b9032daa84898644780349ee7 -INFO:root:PassingDataObject: nmdc:f5a279f221e3d7171aa016ffc5c7bf61 -INFO:root:PassingDataObject: nmdc:0d8cc7e6a917b54d2820951ddc4a5202 -INFO:root:PassingDataObject: nmdc:69c22cf1e22a13a0894180d3ef7308c3 -INFO:root:PassingDataObject: nmdc:567bd3335a80092342397ade9b78c856 -INFO:root:PassingDataObject: nmdc:abc79038b9f77c03464839b348551f8f INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213361 INFO:root:found 1 records INFO:root:record: nmdc:012665937f029b78d2a2e325cc86092e, MAGs Analysis Activity for nmdc:mga0s996 -INFO:root:PassingDataObject: nmdc:89856506bf9a06c1dc62fe5cbbc90034 INFO:root:PassingDataObject: nmdc:2eb0d4473a1fd0dc771e76d957c66688 +INFO:root:PassingDataObject: nmdc:89856506bf9a06c1dc62fe5cbbc90034 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213361 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-gcs98d33 INFO:root:legacy_id: gold:Gp0213357 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gcs98d33 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:cb53962aabcda827b19e270a805dc0e1 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, Read QC Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:3b889c06bb7e48bb4975ceff3a980952 INFO:root:PassingDataObject: nmdc:da7097d7d6673d4e0e1cf90f05af3201 +INFO:root:PassingDataObject: nmdc:3b889c06bb7e48bb4975ceff3a980952 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, ReadBased Analysis Activity for nmdc:mga0dt33 +INFO:root:PassingDataObject: nmdc:15641306d09678eeb660afe9baa0dd52 +INFO:root:PassingDataObject: nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 +INFO:root:PassingDataObject: nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 INFO:root:PassingDataObject: nmdc:7e23e02f296d5e9d401ee3aa5af6881e INFO:root:PassingDataObject: nmdc:15235ba07643fdf9be634dec16cb40d9 -INFO:root:PassingDataObject: nmdc:15641306d09678eeb660afe9baa0dd52 -INFO:root:PassingDataObject: nmdc:438858d832b7204080d117925306057c -INFO:root:PassingDataObject: nmdc:15f09eb6e317e64163c3864a7d75b8f8 INFO:root:PassingDataObject: nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 -INFO:root:PassingDataObject: nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 +INFO:root:PassingDataObject: nmdc:438858d832b7204080d117925306057c INFO:root:PassingDataObject: nmdc:1e211c7908292e3c736ac51d366dafc0 -INFO:root:PassingDataObject: nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 +INFO:root:PassingDataObject: nmdc:15f09eb6e317e64163c3864a7d75b8f8 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, Assembly Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 -INFO:root:PassingDataObject: nmdc:e5f231e2f4737438a54110763946ae2a INFO:root:PassingDataObject: nmdc:36aca4506415f2e7ecab46150cadc4fd -INFO:root:PassingDataObject: nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 +INFO:root:PassingDataObject: nmdc:e5f231e2f4737438a54110763946ae2a +INFO:root:PassingDataObject: nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 INFO:root:PassingDataObject: nmdc:3fc371b6d4a8f79384bfd7027455d6fb +INFO:root:PassingDataObject: nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, Annotation Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:c5f96ea4159a506c6ae3c3827d3b2b44 -INFO:root:PassingDataObject: nmdc:086a1be3ec4b8a498f6e7729287b2c62 -INFO:root:PassingDataObject: nmdc:34f95002976f594ca8a627dff074254c -INFO:root:PassingDataObject: nmdc:b2ad2515aa5458047157414162ec272b -INFO:root:PassingDataObject: nmdc:118a91b0c01a25451991b4dcbc93f1f8 -INFO:root:PassingDataObject: nmdc:f2923fb4124996f246641efabc6c271a -INFO:root:PassingDataObject: nmdc:73a54489961a39fbbf94d1e1bf629a57 -INFO:root:PassingDataObject: nmdc:afb5439ee6d3a212f3e0b9b831ff5a04 +INFO:root:PassingDataObject: nmdc:1d4c165270687552f4078909895ff5ac +INFO:root:PassingDataObject: nmdc:7d215a7ca955f33f070335eac6cf87ca INFO:root:PassingDataObject: nmdc:82e8fe111ff9cc7ace023d14a838cce4 +INFO:root:PassingDataObject: nmdc:bd629abb4fe70f17ad7237bf599b0bef +INFO:root:PassingDataObject: nmdc:73a54489961a39fbbf94d1e1bf629a57 INFO:root:PassingDataObject: nmdc:2887c768ffa0f91e7c67be37e211c0d6 +INFO:root:PassingDataObject: nmdc:6e9028dcb84d24af9c7471c2fc25352d +INFO:root:PassingDataObject: nmdc:b2ad2515aa5458047157414162ec272b +INFO:root:PassingDataObject: nmdc:34f95002976f594ca8a627dff074254c INFO:root:PassingDataObject: nmdc:748a4ada4f254f3c8b214dd7ec24101d INFO:root:PassingDataObject: nmdc:91be4b33d6f603d4cea5f97a9036becf -INFO:root:PassingDataObject: nmdc:7d215a7ca955f33f070335eac6cf87ca INFO:root:PassingDataObject: nmdc:881574e6c2377071a6ccb01c80e4af2e -INFO:root:PassingDataObject: nmdc:bd629abb4fe70f17ad7237bf599b0bef +INFO:root:PassingDataObject: nmdc:f2923fb4124996f246641efabc6c271a +INFO:root:PassingDataObject: nmdc:086a1be3ec4b8a498f6e7729287b2c62 +INFO:root:PassingDataObject: nmdc:afb5439ee6d3a212f3e0b9b831ff5a04 INFO:root:PassingDataObject: nmdc:8df39517236a7fffede1c82b63373fb3 +INFO:root:PassingDataObject: nmdc:118a91b0c01a25451991b4dcbc93f1f8 +INFO:root:PassingDataObject: nmdc:c5f96ea4159a506c6ae3c3827d3b2b44 INFO:root:PassingDataObject: nmdc:cc4fe58a4da63a0dd5853ba3c0e2349a -INFO:root:PassingDataObject: nmdc:6e9028dcb84d24af9c7471c2fc25352d -INFO:root:PassingDataObject: nmdc:1d4c165270687552f4078909895ff5ac INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213357 INFO:root:found 1 records INFO:root:record: nmdc:b29adb7db43cc9ef4b3c042eb3f8538b, MAGs Analysis Activity for nmdc:mga0dt33 -INFO:root:PassingDataObject: nmdc:22f7f7c5091240284a0521fef1e07fe7 INFO:root:PassingDataObject: nmdc:85b56743686535ec6bd512788c6b6181 +INFO:root:PassingDataObject: nmdc:22f7f7c5091240284a0521fef1e07fe7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213357 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-yzrza466 INFO:root:legacy_id: gold:Gp0213368 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-yzrza466 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c4df425ae66b46dcf353097aa64c8935 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, Read QC Activity for nmdc:mga0b982 -INFO:root:PassingDataObject: nmdc:3b7411005de416a82c68151462f846f7 INFO:root:PassingDataObject: nmdc:428534dbbc3d8201682fc3d8f5e818a6 +INFO:root:PassingDataObject: nmdc:3b7411005de416a82c68151462f846f7 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, ReadBased Analysis Activity for nmdc:mga0b982 -INFO:root:PassingDataObject: nmdc:e97d8a552f497bdea19fc444d8890b13 -INFO:root:PassingDataObject: nmdc:73f0017a6c7866c263c64a437df23c7e -INFO:root:PassingDataObject: nmdc:b2debb07a334d9c9eedfaf3f12ff2433 +INFO:root:PassingDataObject: nmdc:a36f26239b60ebb3ca62f050ee6e4739 INFO:root:PassingDataObject: nmdc:62e63bd91b0765d3858fc2791a14a4ea INFO:root:PassingDataObject: nmdc:d2e34c2b30fcc9db48a259e2e194b22e INFO:root:PassingDataObject: nmdc:507af343316140c9e0e7ad26cfd8cf6b -INFO:root:PassingDataObject: nmdc:690a922236d7f0a3df8c4d3c6b2aca5b +INFO:root:PassingDataObject: nmdc:73f0017a6c7866c263c64a437df23c7e INFO:root:PassingDataObject: nmdc:d8f2eb681beb53a20ae6c4dd00819634 -INFO:root:PassingDataObject: nmdc:a36f26239b60ebb3ca62f050ee6e4739 +INFO:root:PassingDataObject: nmdc:690a922236d7f0a3df8c4d3c6b2aca5b +INFO:root:PassingDataObject: nmdc:e97d8a552f497bdea19fc444d8890b13 +INFO:root:PassingDataObject: nmdc:b2debb07a334d9c9eedfaf3f12ff2433 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, Assembly Activity for nmdc:mga0b982 -INFO:root:PassingDataObject: nmdc:2c917868f2b1db5d25b821e3f0dda53e -INFO:root:PassingDataObject: nmdc:ce7da98fd8f8e273ed40ff018bc19deb -INFO:root:PassingDataObject: nmdc:b3fc277745ea0af909bd7c89141beb89 INFO:root:PassingDataObject: nmdc:80aa19f314fa95953264159534fecc73 INFO:root:PassingDataObject: nmdc:3162e231651b3f71e383e240c8f4be33 +INFO:root:PassingDataObject: nmdc:ce7da98fd8f8e273ed40ff018bc19deb +INFO:root:PassingDataObject: nmdc:2c917868f2b1db5d25b821e3f0dda53e +INFO:root:PassingDataObject: nmdc:b3fc277745ea0af909bd7c89141beb89 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, Annotation Activity for nmdc:mga0b982 +INFO:root:PassingDataObject: nmdc:8d0a516b2c5ad7c7672861b7f22a420e +INFO:root:PassingDataObject: nmdc:4002705c09de37b47c9475ca966e39e7 +INFO:root:PassingDataObject: nmdc:bff4a3264794bd3d3a70b37fe3f900ab INFO:root:PassingDataObject: nmdc:47cea600142bdb6708e6a163849991b0 -INFO:root:PassingDataObject: nmdc:0ffb50315aa43232a4ed7e7dbbbc7eee -INFO:root:PassingDataObject: nmdc:406d6519ff16039c252075fafe27bb0a +INFO:root:PassingDataObject: nmdc:affc3ad57f0cfee32982502f53948b18 +INFO:root:PassingDataObject: nmdc:ecd5f0ed7de5dadcfbee52a834de8078 +INFO:root:PassingDataObject: nmdc:523ccdc00364f1582e0d481cd501734c +INFO:root:PassingDataObject: nmdc:ec5ad97a88307bb3bfb236a2e4af6ede INFO:root:PassingDataObject: nmdc:260a5468ab7ca9c259e98e1f58e6c2f9 -INFO:root:PassingDataObject: nmdc:0935eafb6c0b5c01721b78a0c4f9096a INFO:root:PassingDataObject: nmdc:348132dda1f6d1ac19355b6ad41083f1 -INFO:root:PassingDataObject: nmdc:a9206307d63d312babb06d3e4d7eb078 -INFO:root:PassingDataObject: nmdc:ec5ad97a88307bb3bfb236a2e4af6ede -INFO:root:PassingDataObject: nmdc:83ec0ac3b4c081b68c991909a84244b3 -INFO:root:PassingDataObject: nmdc:bff4a3264794bd3d3a70b37fe3f900ab -INFO:root:PassingDataObject: nmdc:ecd5f0ed7de5dadcfbee52a834de8078 -INFO:root:PassingDataObject: nmdc:8d0a516b2c5ad7c7672861b7f22a420e +INFO:root:PassingDataObject: nmdc:0935eafb6c0b5c01721b78a0c4f9096a INFO:root:PassingDataObject: nmdc:8b68b3fa0b508d5a4dbeaf05765d5563 -INFO:root:PassingDataObject: nmdc:affc3ad57f0cfee32982502f53948b18 -INFO:root:PassingDataObject: nmdc:523ccdc00364f1582e0d481cd501734c +INFO:root:PassingDataObject: nmdc:0bdfcf5cde99009d4fbe35d074930757 INFO:root:PassingDataObject: nmdc:b2caaa74e7fe80ce5d8e021c908202cf INFO:root:PassingDataObject: nmdc:34b271c0c1d625c3b2b1975842c1f78e -INFO:root:PassingDataObject: nmdc:0bdfcf5cde99009d4fbe35d074930757 -INFO:root:PassingDataObject: nmdc:4002705c09de37b47c9475ca966e39e7 +INFO:root:PassingDataObject: nmdc:a9206307d63d312babb06d3e4d7eb078 +INFO:root:PassingDataObject: nmdc:83ec0ac3b4c081b68c991909a84244b3 +INFO:root:PassingDataObject: nmdc:406d6519ff16039c252075fafe27bb0a +INFO:root:PassingDataObject: nmdc:0ffb50315aa43232a4ed7e7dbbbc7eee INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213368 INFO:root:found 1 records INFO:root:record: nmdc:07469a0fd749fc6d0294e945430740db, MAGs Analysis Activity for nmdc:mga0b982 -INFO:root:PassingDataObject: nmdc:5e43772bf7df63f5b50b58c0bd0088fd INFO:root:PassingDataObject: nmdc:bd4b70584b2bb19c1af03898b021c2bf +INFO:root:PassingDataObject: nmdc:5e43772bf7df63f5b50b58c0bd0088fd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213368 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-rf37rv10 INFO:root:legacy_id: gold:Gp0213358 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-rf37rv10 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f408775f43e5a6041ade55edecaaeb1a INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, Read QC Activity for nmdc:mga02876 -INFO:root:PassingDataObject: nmdc:b35ffd9123a41404e47b3475f6e1466c INFO:root:PassingDataObject: nmdc:52f0da1dff532763d55f479bdfb5362b +INFO:root:PassingDataObject: nmdc:b35ffd9123a41404e47b3475f6e1466c INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, ReadBased Analysis Activity for nmdc:mga02876 -INFO:root:PassingDataObject: nmdc:2f17427c22ec617560cc33baaa635414 -INFO:root:PassingDataObject: nmdc:30e62c9d1efb5507560099fc9782adc5 -INFO:root:PassingDataObject: nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 -INFO:root:PassingDataObject: nmdc:210b8c6bace8020b6d2a0d9187dc05e6 -INFO:root:PassingDataObject: nmdc:5045870e25c680ea8552596c86cd4a88 INFO:root:PassingDataObject: nmdc:2aa7848845cdedec9f768c7c62845869 INFO:root:PassingDataObject: nmdc:baed2100206fd23cf7a610c67694d54e +INFO:root:PassingDataObject: nmdc:210b8c6bace8020b6d2a0d9187dc05e6 +INFO:root:PassingDataObject: nmdc:5045870e25c680ea8552596c86cd4a88 +INFO:root:PassingDataObject: nmdc:30e62c9d1efb5507560099fc9782adc5 INFO:root:PassingDataObject: nmdc:e958a7799c53160c16084b704b89a8fe +INFO:root:PassingDataObject: nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 +INFO:root:PassingDataObject: nmdc:2f17427c22ec617560cc33baaa635414 INFO:root:PassingDataObject: nmdc:51930ed3dc3e95f11b90f0ad0b502c3a INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, Assembly Activity for nmdc:mga02876 -INFO:root:PassingDataObject: nmdc:1663c6cf4ee95f6ef34537203d31b228 INFO:root:PassingDataObject: nmdc:c1460560b9cbc220b669761d855b9755 -INFO:root:PassingDataObject: nmdc:2c9551f1e148f31aea5270994a18d84d -INFO:root:PassingDataObject: nmdc:80fa4789cc2dc33b4fa4070b41a4ec40 INFO:root:PassingDataObject: nmdc:cc58adbee49b0f26fd33bc079e27afd5 +INFO:root:PassingDataObject: nmdc:80fa4789cc2dc33b4fa4070b41a4ec40 +INFO:root:PassingDataObject: nmdc:2c9551f1e148f31aea5270994a18d84d +INFO:root:PassingDataObject: nmdc:1663c6cf4ee95f6ef34537203d31b228 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, Annotation Activity for nmdc:mga02876 -INFO:root:PassingDataObject: nmdc:4127ac37acbc3a1d82ae7eb1e6346393 +INFO:root:PassingDataObject: nmdc:7cccdbcddc0189f2369d62c260d445a8 +INFO:root:PassingDataObject: nmdc:672f9e0e4f97e721cd9e3c065a5c41a9 +INFO:root:PassingDataObject: nmdc:fd6d0570e08387accbc6e9a485ad517a INFO:root:PassingDataObject: nmdc:1e849a5e58199bca23b93ba27e886827 -INFO:root:PassingDataObject: nmdc:426dfb134fc98749f24075b3c86dee28 -INFO:root:PassingDataObject: nmdc:e7e4b92663d921e859dc05137e3a706a -INFO:root:PassingDataObject: nmdc:f13c62d5851c3eea82f7746fdfb7a975 -INFO:root:PassingDataObject: nmdc:b571b5cc7bd36a23858a390d9b735b26 -INFO:root:PassingDataObject: nmdc:848a203dce17aec5545889250590b8e9 INFO:root:PassingDataObject: nmdc:58e0fa8e0426f18fd6f5fda52b90a57d -INFO:root:PassingDataObject: nmdc:9135ca5cbc9b657562f3fc530b13a653 -INFO:root:PassingDataObject: nmdc:672f9e0e4f97e721cd9e3c065a5c41a9 -INFO:root:PassingDataObject: nmdc:e0c40f37d5bf29776ff2fc2f53d28a73 +INFO:root:PassingDataObject: nmdc:b571b5cc7bd36a23858a390d9b735b26 +INFO:root:PassingDataObject: nmdc:90cbadaff55fbe48a0d9572d0164a884 +INFO:root:PassingDataObject: nmdc:c525756483d78bc9351467809d46a239 +INFO:root:PassingDataObject: nmdc:448611e58c80c7897483088723312535 +INFO:root:PassingDataObject: nmdc:e7e4b92663d921e859dc05137e3a706a INFO:root:PassingDataObject: nmdc:de5e8022931b7858c02aa813028250e1 +INFO:root:PassingDataObject: nmdc:426dfb134fc98749f24075b3c86dee28 +INFO:root:PassingDataObject: nmdc:e0c40f37d5bf29776ff2fc2f53d28a73 INFO:root:PassingDataObject: nmdc:b916f9dd44880eee7c45798c6c9c9f24 +INFO:root:PassingDataObject: nmdc:9135ca5cbc9b657562f3fc530b13a653 +INFO:root:PassingDataObject: nmdc:4127ac37acbc3a1d82ae7eb1e6346393 +INFO:root:PassingDataObject: nmdc:f13c62d5851c3eea82f7746fdfb7a975 +INFO:root:PassingDataObject: nmdc:848a203dce17aec5545889250590b8e9 INFO:root:PassingDataObject: nmdc:84b195686836133749cd977052b28823 -INFO:root:PassingDataObject: nmdc:448611e58c80c7897483088723312535 -INFO:root:PassingDataObject: nmdc:90cbadaff55fbe48a0d9572d0164a884 -INFO:root:PassingDataObject: nmdc:7cccdbcddc0189f2369d62c260d445a8 -INFO:root:PassingDataObject: nmdc:c525756483d78bc9351467809d46a239 -INFO:root:PassingDataObject: nmdc:fd6d0570e08387accbc6e9a485ad517a INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213358 INFO:root:found 1 records INFO:root:record: nmdc:6c7fe677125f9e092453cad2fa19c6e9, MAGs Analysis Activity for nmdc:mga02876 INFO:root:PassingDataObject: nmdc:3222cc01be3ed3bce7173f46777cf050 INFO:root:PassingDataObject: nmdc:3382de3722e82b3c31d728bfc730f4e2 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213358 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-ne1fzr77 INFO:root:legacy_id: gold:Gp0213367 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-ne1fzr77 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:967517f83a03de07d4c0eb53f7c83f05 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, Read QC Activity for nmdc:mga0a011 INFO:root:PassingDataObject: nmdc:b1fc1210cd720b133a89472e787fa86c INFO:root:PassingDataObject: nmdc:e60197c7e994021f69a3895f2d4d8eb3 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, ReadBased Analysis Activity for nmdc:mga0a011 +INFO:root:PassingDataObject: nmdc:5e3ff94d67160a4b9810d3c0716b676f INFO:root:PassingDataObject: nmdc:f37c12739b50edd11198b9c0fbeed6cb -INFO:root:PassingDataObject: nmdc:623812cb5aebbe8b96914b22f055faa9 INFO:root:PassingDataObject: nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 -INFO:root:PassingDataObject: nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 +INFO:root:PassingDataObject: nmdc:1e6d74ec82dca134de4dd3f62a4042eb INFO:root:PassingDataObject: nmdc:02a87bccf020ebf38fa55771da1a39b8 -INFO:root:PassingDataObject: nmdc:4f7adb75056ddd0b4e63066d322e02a2 INFO:root:PassingDataObject: nmdc:2221531a2bbf6cfb3ea8eb0d513ba6d6 -INFO:root:PassingDataObject: nmdc:1e6d74ec82dca134de4dd3f62a4042eb -INFO:root:PassingDataObject: nmdc:5e3ff94d67160a4b9810d3c0716b676f +INFO:root:PassingDataObject: nmdc:623812cb5aebbe8b96914b22f055faa9 +INFO:root:PassingDataObject: nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 +INFO:root:PassingDataObject: nmdc:4f7adb75056ddd0b4e63066d322e02a2 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, Assembly Activity for nmdc:mga0a011 -INFO:root:PassingDataObject: nmdc:f81bb50fba9c05745cfd298cfbe3481b -INFO:root:PassingDataObject: nmdc:faa801494bd5c59f2c74c8347b3919a1 -INFO:root:PassingDataObject: nmdc:b34b35041359938246655f6e851699dc INFO:root:PassingDataObject: nmdc:82e36fe1492818c0ec66d1cd6b545437 +INFO:root:PassingDataObject: nmdc:b34b35041359938246655f6e851699dc +INFO:root:PassingDataObject: nmdc:faa801494bd5c59f2c74c8347b3919a1 INFO:root:PassingDataObject: nmdc:f732fd9bb21687e4353521ca123593f0 +INFO:root:PassingDataObject: nmdc:f81bb50fba9c05745cfd298cfbe3481b INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, Annotation Activity for nmdc:mga0a011 -INFO:root:PassingDataObject: nmdc:8c8a29277943ee03a09b5707c320eb7f -INFO:root:PassingDataObject: nmdc:26c823bbd182f04e776c7a0682faedba -INFO:root:PassingDataObject: nmdc:7675e03793bc27901da7e57f536587fa -INFO:root:PassingDataObject: nmdc:97c002d35a3f6bffc609424118f143c8 -INFO:root:PassingDataObject: nmdc:77ffd3d047fe2c3abf68b3ccfd803422 -INFO:root:PassingDataObject: nmdc:7915b1d34443290338d24cf8de5ea7a2 +INFO:root:PassingDataObject: nmdc:5ee5005f63347f0672cd39f52b8efed5 +INFO:root:PassingDataObject: nmdc:a7729e03c41a8db54c473f0c489ca352 INFO:root:PassingDataObject: nmdc:a5b46c4720bf22d7001db131fcffa41b -INFO:root:PassingDataObject: nmdc:7db99bb8f1b64e4ec10cbac6aa5cccc0 -INFO:root:PassingDataObject: nmdc:5ad1673ea5dc36a01d79869333607077 +INFO:root:PassingDataObject: nmdc:25bdb30be1d2b525db08d50a46d55a79 INFO:root:PassingDataObject: nmdc:237047f7909000bdb8981d6adc75de29 -INFO:root:PassingDataObject: nmdc:e6202f3679b765971c4452aef9b29f44 +INFO:root:PassingDataObject: nmdc:5d7a42e5bc0bbc18a802db8c1821f174 INFO:root:PassingDataObject: nmdc:46a766a064893e42185a71a25fcf8c99 -INFO:root:PassingDataObject: nmdc:e9095658a94960e4e4a081abc46c6c90 -INFO:root:PassingDataObject: nmdc:89749cbcef828cf46aef71848d900e17 -INFO:root:PassingDataObject: nmdc:25bdb30be1d2b525db08d50a46d55a79 -INFO:root:PassingDataObject: nmdc:a7729e03c41a8db54c473f0c489ca352 -INFO:root:PassingDataObject: nmdc:5ee5005f63347f0672cd39f52b8efed5 +INFO:root:PassingDataObject: nmdc:7db99bb8f1b64e4ec10cbac6aa5cccc0 +INFO:root:PassingDataObject: nmdc:7675e03793bc27901da7e57f536587fa INFO:root:PassingDataObject: nmdc:9e28fab274522e01dce3198f4c4513a0 -INFO:root:PassingDataObject: nmdc:5d7a42e5bc0bbc18a802db8c1821f174 +INFO:root:PassingDataObject: nmdc:8c8a29277943ee03a09b5707c320eb7f +INFO:root:PassingDataObject: nmdc:97c002d35a3f6bffc609424118f143c8 +INFO:root:PassingDataObject: nmdc:5ad1673ea5dc36a01d79869333607077 +INFO:root:PassingDataObject: nmdc:26c823bbd182f04e776c7a0682faedba +INFO:root:PassingDataObject: nmdc:89749cbcef828cf46aef71848d900e17 +INFO:root:PassingDataObject: nmdc:e9095658a94960e4e4a081abc46c6c90 +INFO:root:PassingDataObject: nmdc:e6202f3679b765971c4452aef9b29f44 +INFO:root:PassingDataObject: nmdc:7915b1d34443290338d24cf8de5ea7a2 +INFO:root:PassingDataObject: nmdc:77ffd3d047fe2c3abf68b3ccfd803422 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213367 INFO:root:found 1 records INFO:root:record: nmdc:132d82e22c62fdf4c177b4470926a683, MAGs Analysis Activity for nmdc:mga0a011 INFO:root:PassingDataObject: nmdc:8c94863ea1acf7676728bf4f6df6465e INFO:root:PassingDataObject: nmdc:6a90b2297850f65afbe3a4d99407aec8 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213367 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-m8nz8d35 INFO:root:legacy_id: gold:Gp0213362 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-m8nz8d35 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8224d0f7d3ceb191111f6d49e415afc8 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, Read QC Activity for nmdc:mga0g890 INFO:root:PassingDataObject: nmdc:c814bd445b03eaebf8e184d7fd15b373 INFO:root:PassingDataObject: nmdc:0fcfd647558a4ef62478c90adde51806 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, ReadBased Analysis Activity for nmdc:mga0g890 -INFO:root:PassingDataObject: nmdc:76786ed3956bbfbdefe27f0b6dd3b41a -INFO:root:PassingDataObject: nmdc:5ff551f313326d2d99f41215faccc3b4 -INFO:root:PassingDataObject: nmdc:fd8b08b0c9c805f39331087692e6be41 -INFO:root:PassingDataObject: nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 INFO:root:PassingDataObject: nmdc:4d1250a731e6492e6178e5b20a7b8a2a -INFO:root:PassingDataObject: nmdc:6b6185a5e796df1bcfb6096ad89a7aac +INFO:root:PassingDataObject: nmdc:76786ed3956bbfbdefe27f0b6dd3b41a INFO:root:PassingDataObject: nmdc:3d76ff87998c13818880d0316b63187f INFO:root:PassingDataObject: nmdc:9e2ace15f115399d01070d31b2cb3275 INFO:root:PassingDataObject: nmdc:a1175e66c5db74cf3dfe12efdaf692c5 +INFO:root:PassingDataObject: nmdc:5ff551f313326d2d99f41215faccc3b4 +INFO:root:PassingDataObject: nmdc:6b6185a5e796df1bcfb6096ad89a7aac +INFO:root:PassingDataObject: nmdc:fd8b08b0c9c805f39331087692e6be41 +INFO:root:PassingDataObject: nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, Assembly Activity for nmdc:mga0g890 -INFO:root:PassingDataObject: nmdc:c86720388b57a8560fd9175da9b85c8b INFO:root:PassingDataObject: nmdc:347aa6885ede562646eb8d9b2177999b +INFO:root:PassingDataObject: nmdc:c86720388b57a8560fd9175da9b85c8b +INFO:root:PassingDataObject: nmdc:041cd4f4fc2739f7bff0df87bf82135c INFO:root:PassingDataObject: nmdc:cd28211d3f934b43916c5e73819bc8b6 INFO:root:PassingDataObject: nmdc:ba3d490fab94cd5694233e6e3f42c718 -INFO:root:PassingDataObject: nmdc:041cd4f4fc2739f7bff0df87bf82135c INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, Annotation Activity for nmdc:mga0g890 -INFO:root:PassingDataObject: nmdc:4388a163c40cbca30ccd7f000252165e -INFO:root:PassingDataObject: nmdc:0b98196372ad273ee61b4d7c1f7c7162 -INFO:root:PassingDataObject: nmdc:2a39dd8cb7abff4fccfd61da4a89c656 -INFO:root:PassingDataObject: nmdc:efd6dcc40be496e8aae713d1e05b8374 -INFO:root:PassingDataObject: nmdc:243895228650ce5c2df95d146a705031 -INFO:root:PassingDataObject: nmdc:4fd86475ac563a0274f77e89f7b7d43d -INFO:root:PassingDataObject: nmdc:0347062034eed88d5c2430525f01dd6c -INFO:root:PassingDataObject: nmdc:85046d9a0adb3a813cc98e5bae3ec767 -INFO:root:PassingDataObject: nmdc:19edc3de14e8605c67173a6a6efcd7fd -INFO:root:PassingDataObject: nmdc:b0d33aefbc001b9ec4193d4d4d9ac9b7 INFO:root:PassingDataObject: nmdc:e736a7b0ff975173bbdf3e304c992731 INFO:root:PassingDataObject: nmdc:6cb6f44b08ddfc566f2920686b15509a +INFO:root:PassingDataObject: nmdc:85046d9a0adb3a813cc98e5bae3ec767 +INFO:root:PassingDataObject: nmdc:efd6dcc40be496e8aae713d1e05b8374 +INFO:root:PassingDataObject: nmdc:2a39dd8cb7abff4fccfd61da4a89c656 +INFO:root:PassingDataObject: nmdc:19edc3de14e8605c67173a6a6efcd7fd +INFO:root:PassingDataObject: nmdc:4388a163c40cbca30ccd7f000252165e +INFO:root:PassingDataObject: nmdc:0347062034eed88d5c2430525f01dd6c +INFO:root:PassingDataObject: nmdc:4fd86475ac563a0274f77e89f7b7d43d INFO:root:PassingDataObject: nmdc:ea815d0d2c38cb43017b70aab4607f4b -INFO:root:PassingDataObject: nmdc:4b678b348b8ebe049918b33d884fab18 -INFO:root:PassingDataObject: nmdc:4a6e03ecaba73692a2395296fc6c6c74 +INFO:root:PassingDataObject: nmdc:0b98196372ad273ee61b4d7c1f7c7162 INFO:root:PassingDataObject: nmdc:b9cbec3108384e14dc749aab6c11b572 -INFO:root:PassingDataObject: nmdc:d84fd73a8fb159574f204d14af721459 +INFO:root:PassingDataObject: nmdc:b0d33aefbc001b9ec4193d4d4d9ac9b7 INFO:root:PassingDataObject: nmdc:9caa047b55d3a7ec23c481ef5645fdb1 +INFO:root:PassingDataObject: nmdc:243895228650ce5c2df95d146a705031 +INFO:root:PassingDataObject: nmdc:4a6e03ecaba73692a2395296fc6c6c74 INFO:root:PassingDataObject: nmdc:5f1fa0e7edbb0f7d478bcef76214f98a +INFO:root:PassingDataObject: nmdc:d84fd73a8fb159574f204d14af721459 +INFO:root:PassingDataObject: nmdc:4b678b348b8ebe049918b33d884fab18 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213362 INFO:root:found 1 records INFO:root:record: nmdc:366b95f807137c01443b57d6432faf09, MAGs Analysis Activity for nmdc:mga0g890 INFO:root:PassingDataObject: nmdc:cc1aa524fd9fb308a0322719876b24fa INFO:root:PassingDataObject: nmdc:58f999ff780ef3f296e92d134bb79c28 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213362 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-3kdzgf81 INFO:root:legacy_id: gold:Gp0213370 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-3kdzgf81 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7f57dcee7abd6613a46bed9e6d3bc61b INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, Read QC Activity for nmdc:mga0sg75 -INFO:root:PassingDataObject: nmdc:1cf3465f614f908cc61b9b62ba714a93 INFO:root:PassingDataObject: nmdc:bcce93bb0809075db70107e52527904b +INFO:root:PassingDataObject: nmdc:1cf3465f614f908cc61b9b62ba714a93 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, ReadBased Analysis Activity for nmdc:mga0sg75 INFO:root:PassingDataObject: nmdc:946779b32f4331010418fc96cff2f925 -INFO:root:PassingDataObject: nmdc:ab514bf7bf2e5dfb097c4e51fb6acb00 -INFO:root:PassingDataObject: nmdc:f813e000a7d850611c67693832ce01fd INFO:root:PassingDataObject: nmdc:1271e977d7a7a2ddb6e8b6938bc258c5 INFO:root:PassingDataObject: nmdc:26b6c91419fcc609e866b73ff56b4b3b +INFO:root:PassingDataObject: nmdc:f813e000a7d850611c67693832ce01fd +INFO:root:PassingDataObject: nmdc:339c19187baa0181fad7ef791a234e81 +INFO:root:PassingDataObject: nmdc:ab514bf7bf2e5dfb097c4e51fb6acb00 INFO:root:PassingDataObject: nmdc:dccd678c9dd9a2428504d7545a50103a INFO:root:PassingDataObject: nmdc:674982933948d744a2ea5cb87c036a0b INFO:root:PassingDataObject: nmdc:48c49d2858dc9a27b6a70536cfabbf5c -INFO:root:PassingDataObject: nmdc:339c19187baa0181fad7ef791a234e81 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, Assembly Activity for nmdc:mga0sg75 -INFO:root:PassingDataObject: nmdc:05d0bc222b1bb08092c97aa1694a9827 -INFO:root:PassingDataObject: nmdc:a480d869895931d6403768b88344feba -INFO:root:PassingDataObject: nmdc:f64a242f72ed6f8eacf286221775cce3 INFO:root:PassingDataObject: nmdc:4a44c67df49dc0759a43055569666b1d INFO:root:PassingDataObject: nmdc:ba4600ecc237f19486cd331e2ab392a3 +INFO:root:PassingDataObject: nmdc:a480d869895931d6403768b88344feba +INFO:root:PassingDataObject: nmdc:f64a242f72ed6f8eacf286221775cce3 +INFO:root:PassingDataObject: nmdc:05d0bc222b1bb08092c97aa1694a9827 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, Annotation Activity for nmdc:mga0sg75 -INFO:root:PassingDataObject: nmdc:e167a88f85ddc119999795c2231abecd -INFO:root:PassingDataObject: nmdc:7498ad8e88b071a3ebab9f911eb43dd9 +INFO:root:PassingDataObject: nmdc:1f6763c8022761b11e243c22d399eb76 INFO:root:PassingDataObject: nmdc:fe6d23ca26263913bfa5bc42e557789e -INFO:root:PassingDataObject: nmdc:0b0396569882306cec3167123aaaf42e +INFO:root:PassingDataObject: nmdc:f7cef18b4c51a17a955e292c058027ea +INFO:root:PassingDataObject: nmdc:2a87b22aa3a018d516f50d364faaa678 INFO:root:PassingDataObject: nmdc:801e749f0faeb2cb890dc8a75166d65f +INFO:root:PassingDataObject: nmdc:fbfbaf47b5ee3b9ce5c0f4ff58d8b90d +INFO:root:PassingDataObject: nmdc:8c9c427e3df26a1f0d3f86136dcd3102 INFO:root:PassingDataObject: nmdc:47d229cac79dca2f3fe4b11a50544d7a +INFO:root:PassingDataObject: nmdc:0b0396569882306cec3167123aaaf42e +INFO:root:PassingDataObject: nmdc:0a59d0d000d40a0c3f4a7199d0acc43e +INFO:root:PassingDataObject: nmdc:b2c9958ee0fd716cecbf8e70c3cd5d3d +INFO:root:PassingDataObject: nmdc:e167a88f85ddc119999795c2231abecd INFO:root:PassingDataObject: nmdc:bbfee71a35c2a6a2ab5888f4c9976f0f -INFO:root:PassingDataObject: nmdc:8c9c427e3df26a1f0d3f86136dcd3102 -INFO:root:PassingDataObject: nmdc:8a9efc2dcc704445bc29ae43fbeb2581 -INFO:root:PassingDataObject: nmdc:fbfbaf47b5ee3b9ce5c0f4ff58d8b90d -INFO:root:PassingDataObject: nmdc:0b9682601706854c16b2b6311285e5bb INFO:root:PassingDataObject: nmdc:80de41593586d33be41f4e901594b07c -INFO:root:PassingDataObject: nmdc:2a87b22aa3a018d516f50d364faaa678 -INFO:root:PassingDataObject: nmdc:b2c9958ee0fd716cecbf8e70c3cd5d3d -INFO:root:PassingDataObject: nmdc:2e52a002841d064415d945a6423b885c INFO:root:PassingDataObject: nmdc:d707c7fa40a3e4569422def7a059d87c -INFO:root:PassingDataObject: nmdc:0a59d0d000d40a0c3f4a7199d0acc43e -INFO:root:PassingDataObject: nmdc:1f6763c8022761b11e243c22d399eb76 -INFO:root:PassingDataObject: nmdc:f7cef18b4c51a17a955e292c058027ea +INFO:root:PassingDataObject: nmdc:2e52a002841d064415d945a6423b885c +INFO:root:PassingDataObject: nmdc:8a9efc2dcc704445bc29ae43fbeb2581 +INFO:root:PassingDataObject: nmdc:0b9682601706854c16b2b6311285e5bb +INFO:root:PassingDataObject: nmdc:7498ad8e88b071a3ebab9f911eb43dd9 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213370 INFO:root:found 1 records INFO:root:record: nmdc:c3b24917b6908e3976cea38aaeab818a, MAGs Analysis Activity for nmdc:mga0sg75 -INFO:root:PassingDataObject: nmdc:c3675065c7d703eb87d9d5378d235865 INFO:root:PassingDataObject: nmdc:ce3ee81f5f4d0292a0c2c711bdb72b52 +INFO:root:PassingDataObject: nmdc:c3675065c7d703eb87d9d5378d235865 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213370 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-k95tgy11 INFO:root:legacy_id: gold:Gp0213363 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-k95tgy11 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:cf4c63cdb2f8d4b17dc591ac83c042e0 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213363 INFO:root:found 1 records INFO:root:record: nmdc:65077a8ef5daf8f61d7ca440f788381e, Read QC Activity for nmdc:mga0wn63 -INFO:root:PassingDataObject: nmdc:646d88c14ffcc7d5724b138139ef0740 INFO:root:PassingDataObject: nmdc:4737643124cea969498985d8cb0f7148 +INFO:root:PassingDataObject: nmdc:646d88c14ffcc7d5724b138139ef0740 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213363 INFO:root:found 1 records INFO:root:record: nmdc:65077a8ef5daf8f61d7ca440f788381e, ReadBased Analysis Activity for nmdc:mga0wn63 -INFO:root:PassingDataObject: nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 +INFO:root:PassingDataObject: nmdc:474fc04537d441bf10248448601b98c5 INFO:root:PassingDataObject: nmdc:6a38e1214509fb756019f5aa6efa06cb INFO:root:PassingDataObject: nmdc:826950b35dda3575c9b22162aca0456a +INFO:root:PassingDataObject: nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 INFO:root:PassingDataObject: nmdc:de681291a4806cada5a435b0a268bbc5 -INFO:root:PassingDataObject: nmdc:deb626bf8459ffb29623c12aab935b9b -INFO:root:PassingDataObject: nmdc:474fc04537d441bf10248448601b98c5 -INFO:root:PassingDataObject: nmdc:0bdd42a6d86423fea126edeba1482438 INFO:root:PassingDataObject: nmdc:b862fdc0569c76739f06e4dedb1f96ae +INFO:root:PassingDataObject: nmdc:0bdd42a6d86423fea126edeba1482438 INFO:root:PassingDataObject: nmdc:2732870d58f60e64a60c05f499e8ea32 +INFO:root:PassingDataObject: nmdc:deb626bf8459ffb29623c12aab935b9b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213363 INFO:root:found 1 records INFO:root:record: nmdc:65077a8ef5daf8f61d7ca440f788381e, Assembly Activity for nmdc:mga0wn63 INFO:root:PassingDataObject: nmdc:6735368c34cd89f88883ba8be1435281 INFO:root:PassingDataObject: nmdc:2f5d1924e8ac016a3cc58bcf5447f319 INFO:root:PassingDataObject: nmdc:65f0a55ac61f5d41f2cc4c8fd7119400 -INFO:root:PassingDataObject: nmdc:2876f90fb777b0870060aeab0d8d6805 INFO:root:PassingDataObject: nmdc:eacb484bf0df0ac443d61bb462348714 +INFO:root:PassingDataObject: nmdc:2876f90fb777b0870060aeab0d8d6805 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213363 INFO:root:found 1 records INFO:root:record: nmdc:65077a8ef5daf8f61d7ca440f788381e, Annotation Activity for nmdc:mga0wn63 -INFO:root:PassingDataObject: nmdc:bc904b8997150f898d444c8ab1e61ddb -INFO:root:PassingDataObject: nmdc:ceccd142de7ee774d17118dec4861f51 -INFO:root:PassingDataObject: nmdc:2c67e6940560423a67d09699d3209563 -INFO:root:PassingDataObject: nmdc:9edede937565642174df613def8ec31e -INFO:root:PassingDataObject: nmdc:17950ef98b98f293449f903f6f11a864 INFO:root:PassingDataObject: nmdc:465d7bf895237e0a3ff9e018fc1b4fc1 -INFO:root:PassingDataObject: nmdc:3356e815d894820daee0aa5ce8041ef2 -INFO:root:PassingDataObject: nmdc:56b7b6093cf46475828511b24fffa8b9 -INFO:root:PassingDataObject: nmdc:b4eab4799929060589bd121b04c6a093 -INFO:root:PassingDataObject: nmdc:af911c47eb5f5b2d843d7735260a2ba4 -INFO:root:PassingDataObject: nmdc:90df09361f17030d2dd4d736ec911276 -INFO:root:PassingDataObject: nmdc:a157a9fefff8a4970f75e67e3e943410 +INFO:root:PassingDataObject: nmdc:bc904b8997150f898d444c8ab1e61ddb INFO:root:PassingDataObject: nmdc:6e5375fc7a27dfbf579953febc9f843e -INFO:root:PassingDataObject: nmdc:287793a4fa3f9314d9a2ffa3f999914c -INFO:root:PassingDataObject: nmdc:21d35e3e99cf31ebde2f3fee5c3fde83 +INFO:root:PassingDataObject: nmdc:90df09361f17030d2dd4d736ec911276 +INFO:root:PassingDataObject: nmdc:af911c47eb5f5b2d843d7735260a2ba4 +INFO:root:PassingDataObject: nmdc:3356e815d894820daee0aa5ce8041ef2 INFO:root:PassingDataObject: nmdc:15d1b4dea64583add0b70d734ea27c97 -INFO:root:PassingDataObject: nmdc:a08890b6101ad34ce3c1459ce38b44a4 INFO:root:PassingDataObject: nmdc:c634e84393e4b5bc6f2fd3560d32a270 +INFO:root:PassingDataObject: nmdc:17950ef98b98f293449f903f6f11a864 INFO:root:PassingDataObject: nmdc:bd8f249bf366388a6bf736e47b14c8a9 +INFO:root:PassingDataObject: nmdc:2c67e6940560423a67d09699d3209563 +INFO:root:PassingDataObject: nmdc:ceccd142de7ee774d17118dec4861f51 +INFO:root:PassingDataObject: nmdc:287793a4fa3f9314d9a2ffa3f999914c +INFO:root:PassingDataObject: nmdc:a157a9fefff8a4970f75e67e3e943410 +INFO:root:PassingDataObject: nmdc:56b7b6093cf46475828511b24fffa8b9 +INFO:root:PassingDataObject: nmdc:21d35e3e99cf31ebde2f3fee5c3fde83 +INFO:root:PassingDataObject: nmdc:a08890b6101ad34ce3c1459ce38b44a4 +INFO:root:PassingDataObject: nmdc:9edede937565642174df613def8ec31e +INFO:root:PassingDataObject: nmdc:b4eab4799929060589bd121b04c6a093 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213363 INFO:root:found 1 records INFO:root:record: nmdc:65077a8ef5daf8f61d7ca440f788381e, MAGs Analysis Activity for nmdc:mga0wn63 -INFO:root:PassingDataObject: nmdc:125f68eedc66c10473d08225f81c22f6 INFO:root:PassingDataObject: nmdc:027ee585ab2cbd25614e804d60df72a3 +INFO:root:PassingDataObject: nmdc:125f68eedc66c10473d08225f81c22f6 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213363 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-f4eray08 INFO:root:legacy_id: gold:Gp0213365 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-f4eray08 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:82254db0eab492d5074a5d36b96e491a INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213365 INFO:root:found 1 records INFO:root:record: nmdc:62d798b0bc7f186c279aed20d9dfe0d0, Read QC Activity for nmdc:mga0pv39 INFO:root:PassingDataObject: nmdc:59a65be5ea1e040bba022058db19fedc INFO:root:PassingDataObject: nmdc:51cef035e7988c14b2a2bc696abcd069 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213365 INFO:root:found 1 records INFO:root:record: nmdc:62d798b0bc7f186c279aed20d9dfe0d0, ReadBased Analysis Activity for nmdc:mga0pv39 -INFO:root:PassingDataObject: nmdc:901f4ef845f6b1a8b2f7c86702e3cae0 -INFO:root:PassingDataObject: nmdc:83e7f3a3f086352e8a82d204534ada68 INFO:root:PassingDataObject: nmdc:0ba6b3b97535f8a5aff0eef041442f32 -INFO:root:PassingDataObject: nmdc:10d3cf3416ffabbfc57ef646dfef5794 -INFO:root:PassingDataObject: nmdc:a308ef6c9a3b0f1054752cad8ad71596 +INFO:root:PassingDataObject: nmdc:95d67ace97bf6b69ae023b0925c01abf INFO:root:PassingDataObject: nmdc:d1069317969e0bf58d4b35572c7fef1c +INFO:root:PassingDataObject: nmdc:83e7f3a3f086352e8a82d204534ada68 INFO:root:PassingDataObject: nmdc:0674278738def7a9236bd7835dec3560 -INFO:root:PassingDataObject: nmdc:95d67ace97bf6b69ae023b0925c01abf +INFO:root:PassingDataObject: nmdc:10d3cf3416ffabbfc57ef646dfef5794 INFO:root:PassingDataObject: nmdc:b17d51b78c9968df0408febb80cc9b00 +INFO:root:PassingDataObject: nmdc:901f4ef845f6b1a8b2f7c86702e3cae0 +INFO:root:PassingDataObject: nmdc:a308ef6c9a3b0f1054752cad8ad71596 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213365 INFO:root:found 1 records INFO:root:record: nmdc:62d798b0bc7f186c279aed20d9dfe0d0, Assembly Activity for nmdc:mga0pv39 -INFO:root:PassingDataObject: nmdc:5568d32425fac01abdcc941bdbf7cb09 -INFO:root:PassingDataObject: nmdc:7e73261a152ca81e49124f8eb6dd8271 +INFO:root:PassingDataObject: nmdc:9c80d763b2a6f29018c4b38bcc832c1d INFO:root:PassingDataObject: nmdc:9ec78c306d5efffc28a6b338b0f41e40 +INFO:root:PassingDataObject: nmdc:7e73261a152ca81e49124f8eb6dd8271 +INFO:root:PassingDataObject: nmdc:5568d32425fac01abdcc941bdbf7cb09 INFO:root:PassingDataObject: nmdc:fd297c98e93c06074df6bee8a256f016 -INFO:root:PassingDataObject: nmdc:9c80d763b2a6f29018c4b38bcc832c1d INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213365 INFO:root:found 1 records INFO:root:record: nmdc:62d798b0bc7f186c279aed20d9dfe0d0, Annotation Activity for nmdc:mga0pv39 -INFO:root:PassingDataObject: nmdc:d232118ab80ad7d376775dc8e27d2a34 -INFO:root:PassingDataObject: nmdc:f97d663a623196efbd6fb962cbcb3f0f -INFO:root:PassingDataObject: nmdc:fca7538e7493c935b1665a4d3d3dad8b +INFO:root:PassingDataObject: nmdc:b57cafda4884e074f535261fe2e967db +INFO:root:PassingDataObject: nmdc:f815c96625f4b3902f33ec4f786f4b03 INFO:root:PassingDataObject: nmdc:cb4b8fda55b5f88cd4306a6f06807dc9 -INFO:root:PassingDataObject: nmdc:3ba1226b44634c3b0bd7fce0e7fce543 -INFO:root:PassingDataObject: nmdc:53f7d9fa5c8d03b0c27d13c891324f0c -INFO:root:PassingDataObject: nmdc:74a38e65cd786fe5fb42b6b307006993 +INFO:root:PassingDataObject: nmdc:d232118ab80ad7d376775dc8e27d2a34 INFO:root:PassingDataObject: nmdc:2b8c4db58a21ba5d27f0e7b3f014ff24 +INFO:root:PassingDataObject: nmdc:52444aa9467812958781720f60d294c2 +INFO:root:PassingDataObject: nmdc:74a38e65cd786fe5fb42b6b307006993 +INFO:root:PassingDataObject: nmdc:2c31bfd708bf121478447b526a2463df +INFO:root:PassingDataObject: nmdc:04a5ec64fb23b602b41b858e89caac44 +INFO:root:PassingDataObject: nmdc:f97d663a623196efbd6fb962cbcb3f0f +INFO:root:PassingDataObject: nmdc:4f05aa5c790bb7e3c9018ee77873700c INFO:root:PassingDataObject: nmdc:f6ab0425e657421c1180818210f55189 INFO:root:PassingDataObject: nmdc:653902ec3dc6ae352e30a89d96b14ec6 -INFO:root:PassingDataObject: nmdc:b57cafda4884e074f535261fe2e967db +INFO:root:PassingDataObject: nmdc:3ba1226b44634c3b0bd7fce0e7fce543 +INFO:root:PassingDataObject: nmdc:53f7d9fa5c8d03b0c27d13c891324f0c +INFO:root:PassingDataObject: nmdc:fca7538e7493c935b1665a4d3d3dad8b +INFO:root:PassingDataObject: nmdc:837dcb5523c3790688dd77c9ddaf1ead INFO:root:PassingDataObject: nmdc:eebaed2d2af3dcf8c4dde6f1afa4be4b -INFO:root:PassingDataObject: nmdc:f815c96625f4b3902f33ec4f786f4b03 INFO:root:PassingDataObject: nmdc:ba9c4479aceacb0bbf72cf66b80897a2 -INFO:root:PassingDataObject: nmdc:4f05aa5c790bb7e3c9018ee77873700c -INFO:root:PassingDataObject: nmdc:04a5ec64fb23b602b41b858e89caac44 -INFO:root:PassingDataObject: nmdc:52444aa9467812958781720f60d294c2 -INFO:root:PassingDataObject: nmdc:837dcb5523c3790688dd77c9ddaf1ead -INFO:root:PassingDataObject: nmdc:2c31bfd708bf121478447b526a2463df INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213365 INFO:root:found 1 records INFO:root:record: nmdc:62d798b0bc7f186c279aed20d9dfe0d0, MAGs Analysis Activity for nmdc:mga0pv39 -INFO:root:PassingDataObject: nmdc:092f046c7b17c0e700cc243824776a6d INFO:root:PassingDataObject: nmdc:b11c5b3b9b8bf250aa53b4fc167315b4 +INFO:root:PassingDataObject: nmdc:092f046c7b17c0e700cc243824776a6d INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213365 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-ynq39f38 INFO:root:legacy_id: gold:Gp0213373 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-ynq39f38 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:49b6ab7f5a43b171f4b6de616624fe02 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213373 INFO:root:found 1 records INFO:root:record: nmdc:a6cc148c5ad2c97018dd77beff58ffe3, Read QC Activity for nmdc:mga0cv29 INFO:root:PassingDataObject: nmdc:9802759737e5cfe94f21c7bec3a97e54 INFO:root:PassingDataObject: nmdc:8a5d10c8d78ee52ee1b0932d568f1995 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213373 INFO:root:found 1 records INFO:root:record: nmdc:a6cc148c5ad2c97018dd77beff58ffe3, ReadBased Analysis Activity for nmdc:mga0cv29 -INFO:root:PassingDataObject: nmdc:a76377ff252e930286d7f4a7e13103b4 -INFO:root:PassingDataObject: nmdc:981fa88038f8c9863c4c07a68491b9d8 INFO:root:PassingDataObject: nmdc:f068fba7ce9a1b7af877a0a49d5948a2 -INFO:root:PassingDataObject: nmdc:bd406700f630317282ce5bca93db8e01 +INFO:root:PassingDataObject: nmdc:a76377ff252e930286d7f4a7e13103b4 +INFO:root:PassingDataObject: nmdc:00fafd896809d58767b902d1c5915db8 INFO:root:PassingDataObject: nmdc:9b64574b49b04ae5e4e4e5b43d7d274b -INFO:root:PassingDataObject: nmdc:32c79918dafb7609623d1f23dc7b4bc5 +INFO:root:PassingDataObject: nmdc:981fa88038f8c9863c4c07a68491b9d8 INFO:root:PassingDataObject: nmdc:71336e0a19a89c8826ee4fce1620ede2 -INFO:root:PassingDataObject: nmdc:00fafd896809d58767b902d1c5915db8 INFO:root:PassingDataObject: nmdc:3e3820736b404c3ae54aefcd887eaaad +INFO:root:PassingDataObject: nmdc:32c79918dafb7609623d1f23dc7b4bc5 +INFO:root:PassingDataObject: nmdc:bd406700f630317282ce5bca93db8e01 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213373 INFO:root:found 1 records INFO:root:record: nmdc:a6cc148c5ad2c97018dd77beff58ffe3, Assembly Activity for nmdc:mga0cv29 +INFO:root:PassingDataObject: nmdc:5c9812d71dda10c62034bfbda53bd31c +INFO:root:PassingDataObject: nmdc:0fb0980ccfee06658b6d808ec232245e INFO:root:PassingDataObject: nmdc:aef2f1ad1fb1a52a929fe7bb532729df INFO:root:PassingDataObject: nmdc:2136555c4e8c6cf99f7de4bd3cda9fd4 INFO:root:PassingDataObject: nmdc:a179c7b8c2d4faa8774aa9d55c29cd84 -INFO:root:PassingDataObject: nmdc:0fb0980ccfee06658b6d808ec232245e -INFO:root:PassingDataObject: nmdc:5c9812d71dda10c62034bfbda53bd31c INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213373 INFO:root:found 1 records INFO:root:record: nmdc:a6cc148c5ad2c97018dd77beff58ffe3, Annotation Activity for nmdc:mga0cv29 -INFO:root:PassingDataObject: nmdc:80b7c187937b07c605f25b7bb3b1bbb6 -INFO:root:PassingDataObject: nmdc:243263b36fac5e47614e1bd701b7b672 -INFO:root:PassingDataObject: nmdc:48768c67885ee635cd54ba7c7ad29af4 -INFO:root:PassingDataObject: nmdc:5c578af7643804741c9b2a6ef55718bf -INFO:root:PassingDataObject: nmdc:3ef761462fedd55662068c63702dad2c -INFO:root:PassingDataObject: nmdc:70e15cb0b0c77001c799ffffe3937913 INFO:root:PassingDataObject: nmdc:4954833731d1127cf8534c41d818eeb8 -INFO:root:PassingDataObject: nmdc:e34b50277d970406898e33693b196b4c -INFO:root:PassingDataObject: nmdc:938f440487dbb16fef64ad1783a8deb9 -INFO:root:PassingDataObject: nmdc:fc6b427dd9fa038fe52606f775141d96 +INFO:root:PassingDataObject: nmdc:70e15cb0b0c77001c799ffffe3937913 INFO:root:PassingDataObject: nmdc:5b429872068a206e02eedda75c2745a1 -INFO:root:PassingDataObject: nmdc:2a884495ab5fadb06ba73bcc302562a1 INFO:root:PassingDataObject: nmdc:fdec31e757bd5dbe50c58a260d6b9e2c +INFO:root:PassingDataObject: nmdc:80b7c187937b07c605f25b7bb3b1bbb6 +INFO:root:PassingDataObject: nmdc:48768c67885ee635cd54ba7c7ad29af4 +INFO:root:PassingDataObject: nmdc:5c578af7643804741c9b2a6ef55718bf +INFO:root:PassingDataObject: nmdc:243263b36fac5e47614e1bd701b7b672 INFO:root:PassingDataObject: nmdc:b5ba1cef405120528b12716131ba14c5 -INFO:root:PassingDataObject: nmdc:537130f377ed7f6acbeba3270e71e9b1 -INFO:root:PassingDataObject: nmdc:4ab467d00c2802f9f9b06477acce4240 +INFO:root:PassingDataObject: nmdc:2a884495ab5fadb06ba73bcc302562a1 +INFO:root:PassingDataObject: nmdc:f57e71a810914f7d1c98e4dde0db7a97 +INFO:root:PassingDataObject: nmdc:fc6b427dd9fa038fe52606f775141d96 INFO:root:PassingDataObject: nmdc:0dab4804a1d579f66583a763aef430f9 +INFO:root:PassingDataObject: nmdc:537130f377ed7f6acbeba3270e71e9b1 INFO:root:PassingDataObject: nmdc:180d5621366fa5eb7834e49db8fd7bdf -INFO:root:PassingDataObject: nmdc:f57e71a810914f7d1c98e4dde0db7a97 +INFO:root:PassingDataObject: nmdc:e34b50277d970406898e33693b196b4c +INFO:root:PassingDataObject: nmdc:3ef761462fedd55662068c63702dad2c +INFO:root:PassingDataObject: nmdc:938f440487dbb16fef64ad1783a8deb9 +INFO:root:PassingDataObject: nmdc:4ab467d00c2802f9f9b06477acce4240 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213373 INFO:root:found 1 records INFO:root:record: nmdc:a6cc148c5ad2c97018dd77beff58ffe3, MAGs Analysis Activity for nmdc:mga0cv29 INFO:root:PassingDataObject: nmdc:399ee176a5bee193c62aea76491bc88b INFO:root:PassingDataObject: nmdc:e789d66f5e52c4c6c0d06254f98735a5 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213373 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-r2n4hp61 INFO:root:legacy_id: gold:Gp0213375 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-r2n4hp61 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:452104acaf8a6d065f9a8fdbd64ee882 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, Read QC Activity for nmdc:mga05q34 INFO:root:PassingDataObject: nmdc:634a6e9a9da99acbce8e2c6d3ca65eab INFO:root:PassingDataObject: nmdc:04724f44f395f5cbfb6abcf8cc3222a6 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, ReadBased Analysis Activity for nmdc:mga05q34 -INFO:root:PassingDataObject: nmdc:4afce32f5922f3d24974731cffa0e072 INFO:root:PassingDataObject: nmdc:264bbbabc0400e955a1ee47b23899b85 +INFO:root:PassingDataObject: nmdc:26245482f5eda14a16009f36c78a468a INFO:root:PassingDataObject: nmdc:7917ca1612bc2183c379fd41630fc868 +INFO:root:PassingDataObject: nmdc:8fdf29ba4cc43ca7736c46067a9f3351 +INFO:root:PassingDataObject: nmdc:cc821ed55b3013746236929f35c07653 INFO:root:PassingDataObject: nmdc:5c31fd3626fcc7433c2ca7ec8cc7d5be +INFO:root:PassingDataObject: nmdc:4afce32f5922f3d24974731cffa0e072 INFO:root:PassingDataObject: nmdc:c1de94e79e1c2712b2de6a06043f3c6c -INFO:root:PassingDataObject: nmdc:cc821ed55b3013746236929f35c07653 INFO:root:PassingDataObject: nmdc:28a110a5930d4437e661d088fccd2e5b -INFO:root:PassingDataObject: nmdc:8fdf29ba4cc43ca7736c46067a9f3351 -INFO:root:PassingDataObject: nmdc:26245482f5eda14a16009f36c78a468a INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, Assembly Activity for nmdc:mga05q34 -INFO:root:PassingDataObject: nmdc:1eb1dda732d8ea0bfc97e1c0dc1e3dab INFO:root:PassingDataObject: nmdc:36bbbe90278c8b6e8004bd4930e8b27d -INFO:root:PassingDataObject: nmdc:81d6d8b2bc024d33b02c2bbfaf893e43 -INFO:root:PassingDataObject: nmdc:5ad64c80eb358337a7eab45d7afbf150 INFO:root:PassingDataObject: nmdc:c127fb0bfbbb33cecda3574d1506dc1a +INFO:root:PassingDataObject: nmdc:5ad64c80eb358337a7eab45d7afbf150 +INFO:root:PassingDataObject: nmdc:1eb1dda732d8ea0bfc97e1c0dc1e3dab +INFO:root:PassingDataObject: nmdc:81d6d8b2bc024d33b02c2bbfaf893e43 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, Annotation Activity for nmdc:mga05q34 -INFO:root:PassingDataObject: nmdc:b5a374a2ba59c7c3386df96e17464e89 -INFO:root:PassingDataObject: nmdc:85290045aafd508270f58d049f9fa307 -INFO:root:PassingDataObject: nmdc:f12487646199aa24c13881ad5748427c -INFO:root:PassingDataObject: nmdc:ec48857d722a2c9c5925ad03c899ea4f -INFO:root:PassingDataObject: nmdc:65ccef80c31933950a5ff1e06c698dc5 -INFO:root:PassingDataObject: nmdc:8dcdb339ac8f6f47bcfcfbfa9531c4bd -INFO:root:PassingDataObject: nmdc:5babec2c82806d7c5f93b7745665f9b0 -INFO:root:PassingDataObject: nmdc:c59ff02e1296ebede3ab1288deca94aa -INFO:root:PassingDataObject: nmdc:f4f5c43f6ac5c841457d34e51edb3c14 -INFO:root:PassingDataObject: nmdc:99eee9a1e46d9570eb9ac50dc1e34c51 -INFO:root:PassingDataObject: nmdc:8324e5914a74729265d91b86072e44c9 -INFO:root:PassingDataObject: nmdc:df8057461f8382d78bcee2563514d7a0 -INFO:root:PassingDataObject: nmdc:37575d20b275957091aa398829aeeffe -INFO:root:PassingDataObject: nmdc:357ef3a7ce3fca0538c9febab1106eb9 INFO:root:PassingDataObject: nmdc:206fba5bc806352f03f87e3b6547f0e8 INFO:root:PassingDataObject: nmdc:a11704d57cad5ce52b69cfe208bd4a40 +INFO:root:PassingDataObject: nmdc:df8057461f8382d78bcee2563514d7a0 +INFO:root:PassingDataObject: nmdc:357ef3a7ce3fca0538c9febab1106eb9 INFO:root:PassingDataObject: nmdc:4d4c0ef848024340135b4ad22a645fff +INFO:root:PassingDataObject: nmdc:65ccef80c31933950a5ff1e06c698dc5 +INFO:root:PassingDataObject: nmdc:37575d20b275957091aa398829aeeffe +INFO:root:PassingDataObject: nmdc:ec48857d722a2c9c5925ad03c899ea4f +INFO:root:PassingDataObject: nmdc:2e4480d5ee1f1667933f4fde133f09b4 +INFO:root:PassingDataObject: nmdc:99eee9a1e46d9570eb9ac50dc1e34c51 +INFO:root:PassingDataObject: nmdc:f4f5c43f6ac5c841457d34e51edb3c14 +INFO:root:PassingDataObject: nmdc:c59ff02e1296ebede3ab1288deca94aa +INFO:root:PassingDataObject: nmdc:5babec2c82806d7c5f93b7745665f9b0 +INFO:root:PassingDataObject: nmdc:f12487646199aa24c13881ad5748427c +INFO:root:PassingDataObject: nmdc:8324e5914a74729265d91b86072e44c9 +INFO:root:PassingDataObject: nmdc:8dcdb339ac8f6f47bcfcfbfa9531c4bd INFO:root:PassingDataObject: nmdc:d10f6951e1df86cf074cc374fe48fb5c -INFO:root:PassingDataObject: nmdc:2e4480d5ee1f1667933f4fde133f09b4 +INFO:root:PassingDataObject: nmdc:85290045aafd508270f58d049f9fa307 +INFO:root:PassingDataObject: nmdc:b5a374a2ba59c7c3386df96e17464e89 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213375 INFO:root:found 1 records INFO:root:record: nmdc:496e20a5a725b9fe78cf583f35ed221f, MAGs Analysis Activity for nmdc:mga05q34 -INFO:root:PassingDataObject: nmdc:b3207d6fb1946f46b4fa8b738fcbc810 INFO:root:PassingDataObject: nmdc:a4e5d205de6eb5b046946e5852efef4b +INFO:root:PassingDataObject: nmdc:b3207d6fb1946f46b4fa8b738fcbc810 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213375 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-zdmbqr75 INFO:root:legacy_id: gold:Gp0213374 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zdmbqr75 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:340ba2dc2e14b38bf653cbc8dcedaf9b INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, Read QC Activity for nmdc:mga02682 INFO:root:PassingDataObject: nmdc:6be4dde34892f494951c3aa6b1ef20f5 INFO:root:PassingDataObject: nmdc:9574a9d240faa7d14b437a54f781aae5 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, ReadBased Analysis Activity for nmdc:mga02682 INFO:root:PassingDataObject: nmdc:31763cdf3ec24a41415be8fe6b8a74f0 -INFO:root:PassingDataObject: nmdc:d9541adfd8828f5845b5dac50624ee85 -INFO:root:PassingDataObject: nmdc:80bd31c1a4547a82af98201bce0a62cb -INFO:root:PassingDataObject: nmdc:aa45d91d913487c869787b2b0f212cff -INFO:root:PassingDataObject: nmdc:2736512ac9420d3b84d858f8a6498b14 INFO:root:PassingDataObject: nmdc:875dd6dee6a4037f6b8e1f9ddca12adb +INFO:root:PassingDataObject: nmdc:8009808473b4d07d26158a4b78e5adc6 INFO:root:PassingDataObject: nmdc:39b61c73ee7a96e6ed87665e511a5c36 +INFO:root:PassingDataObject: nmdc:aa45d91d913487c869787b2b0f212cff +INFO:root:PassingDataObject: nmdc:80bd31c1a4547a82af98201bce0a62cb +INFO:root:PassingDataObject: nmdc:d9541adfd8828f5845b5dac50624ee85 INFO:root:PassingDataObject: nmdc:2fa167e49f18a399b4714c4d0faef45f -INFO:root:PassingDataObject: nmdc:8009808473b4d07d26158a4b78e5adc6 +INFO:root:PassingDataObject: nmdc:2736512ac9420d3b84d858f8a6498b14 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, Assembly Activity for nmdc:mga02682 INFO:root:PassingDataObject: nmdc:f1473374ec89d68b1ec2040b0f1ea69d +INFO:root:PassingDataObject: nmdc:12d3fc6a3b428e42b5f4a5dcfffe331e INFO:root:PassingDataObject: nmdc:c6ca88412432aab946d39d1acc219493 INFO:root:PassingDataObject: nmdc:7460ccce72e5cca71c16eed12f2606f3 -INFO:root:PassingDataObject: nmdc:12d3fc6a3b428e42b5f4a5dcfffe331e INFO:root:PassingDataObject: nmdc:cc67b77cd5d0477b393cb14b7d951f2e INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, Annotation Activity for nmdc:mga02682 -INFO:root:PassingDataObject: nmdc:bd7b8b54a73319627007e699d2fc1406 +INFO:root:PassingDataObject: nmdc:44104f05569791032a9a91f0a167ac23 +INFO:root:PassingDataObject: nmdc:bb98c7f29ecefc1f05e6f948fef4a19c INFO:root:PassingDataObject: nmdc:8da707885fd00caab522778b320aa6f3 +INFO:root:PassingDataObject: nmdc:8f3cf2d13e16ccbcb90e551c3de8c4d9 INFO:root:PassingDataObject: nmdc:800152aa572d98a8606c1a9da85966ea +INFO:root:PassingDataObject: nmdc:14237b97b2a35419af87ec81493acade +INFO:root:PassingDataObject: nmdc:13c98e6f131009e66fbd346d47d1858d +INFO:root:PassingDataObject: nmdc:d2d6b8e08040f135d63cad7f88e1ab9b INFO:root:PassingDataObject: nmdc:e69ddab7600dd5a36c600c7bfeaa7b35 -INFO:root:PassingDataObject: nmdc:44104f05569791032a9a91f0a167ac23 +INFO:root:PassingDataObject: nmdc:11e47fb9491363a70398a6cec7c9b983 +INFO:root:PassingDataObject: nmdc:120c84f8c0f042e4e1e7d08a56d8779b INFO:root:PassingDataObject: nmdc:06b8c19917c4a1d5aded26af493bc677 -INFO:root:PassingDataObject: nmdc:13c98e6f131009e66fbd346d47d1858d +INFO:root:PassingDataObject: nmdc:47c7b968452eccdb02b8807318fe7bb8 +INFO:root:PassingDataObject: nmdc:bd7b8b54a73319627007e699d2fc1406 INFO:root:PassingDataObject: nmdc:5c8a96c74787e14b52349714988cb8ce -INFO:root:PassingDataObject: nmdc:120c84f8c0f042e4e1e7d08a56d8779b -INFO:root:PassingDataObject: nmdc:8f3cf2d13e16ccbcb90e551c3de8c4d9 -INFO:root:PassingDataObject: nmdc:10627b5da68cb8289a4d6c0122e5c28f INFO:root:PassingDataObject: nmdc:445507c159e63d2dbb9f276759936511 INFO:root:PassingDataObject: nmdc:234422053475f745397ec466ae08105a -INFO:root:PassingDataObject: nmdc:bb98c7f29ecefc1f05e6f948fef4a19c -INFO:root:PassingDataObject: nmdc:11e47fb9491363a70398a6cec7c9b983 -INFO:root:PassingDataObject: nmdc:d2d6b8e08040f135d63cad7f88e1ab9b -INFO:root:PassingDataObject: nmdc:14237b97b2a35419af87ec81493acade +INFO:root:PassingDataObject: nmdc:10627b5da68cb8289a4d6c0122e5c28f INFO:root:PassingDataObject: nmdc:f4adbface8c83bf90dd0191f43cc9fee -INFO:root:PassingDataObject: nmdc:47c7b968452eccdb02b8807318fe7bb8 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213374 INFO:root:found 1 records INFO:root:record: nmdc:819322fc2eb4d2ac7c0a660a09753c1a, MAGs Analysis Activity for nmdc:mga02682 -INFO:root:PassingDataObject: nmdc:2131d97756367cc8ebe2c739fa0c2e96 INFO:root:PassingDataObject: nmdc:0a9f92e8c7522f86086b1e436287f785 +INFO:root:PassingDataObject: nmdc:2131d97756367cc8ebe2c739fa0c2e96 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213374 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-a9bm9657 INFO:root:legacy_id: gold:Gp0213364 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-a9bm9657 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:e0e0b9582935ccbf60eab11942ee902b INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, Read QC Activity for nmdc:mga03974 INFO:root:PassingDataObject: nmdc:0507c7f724fc6486434173e867e70b60 INFO:root:PassingDataObject: nmdc:01e059c5e6fdf9001080fce3590994fd INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, ReadBased Analysis Activity for nmdc:mga03974 -INFO:root:PassingDataObject: nmdc:609193d1827fe0bf84b2619482b9516b -INFO:root:PassingDataObject: nmdc:83c139787bbf71432e75394b91245fbd -INFO:root:PassingDataObject: nmdc:c49776b0c1e9a723028d64765d461dde -INFO:root:PassingDataObject: nmdc:897f78d77df302e2725502f48a8da32f -INFO:root:PassingDataObject: nmdc:12a138a940e31fb8b2d795f5d96faffe +INFO:root:PassingDataObject: nmdc:8567bfd74a6af58671e4bf628b8d1f55 INFO:root:PassingDataObject: nmdc:bdd0a982ee857564d4a5b2034350745f INFO:root:PassingDataObject: nmdc:33fc7959840a415b298e740ba687ff1b -INFO:root:PassingDataObject: nmdc:8567bfd74a6af58671e4bf628b8d1f55 INFO:root:PassingDataObject: nmdc:b9fb2a2248fc685d9bc638da2282f3ec +INFO:root:PassingDataObject: nmdc:12a138a940e31fb8b2d795f5d96faffe +INFO:root:PassingDataObject: nmdc:83c139787bbf71432e75394b91245fbd +INFO:root:PassingDataObject: nmdc:c49776b0c1e9a723028d64765d461dde +INFO:root:PassingDataObject: nmdc:897f78d77df302e2725502f48a8da32f +INFO:root:PassingDataObject: nmdc:609193d1827fe0bf84b2619482b9516b INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, Assembly Activity for nmdc:mga03974 +INFO:root:PassingDataObject: nmdc:bb55be8fa6bd6fbfc25b18d8d3e5f6a2 INFO:root:PassingDataObject: nmdc:a868f3f8fabbcc34c3151e698428131e -INFO:root:PassingDataObject: nmdc:f088c7e9b432749259d69bd53adaa219 -INFO:root:PassingDataObject: nmdc:4a7bfc78ce8d5949459cd1fc1d38a14f INFO:root:PassingDataObject: nmdc:9d27e1e5a576e1b05566d9a0d104a4f5 -INFO:root:PassingDataObject: nmdc:bb55be8fa6bd6fbfc25b18d8d3e5f6a2 +INFO:root:PassingDataObject: nmdc:4a7bfc78ce8d5949459cd1fc1d38a14f +INFO:root:PassingDataObject: nmdc:f088c7e9b432749259d69bd53adaa219 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, Annotation Activity for nmdc:mga03974 -INFO:root:PassingDataObject: nmdc:d36b8586ec9cab108a3c69e06ad88a4a -INFO:root:PassingDataObject: nmdc:bf82e812ddf8e7568c0c0051ddbe470e -INFO:root:PassingDataObject: nmdc:896e17c421d5cd7bb30f280cd6b4ff5a -INFO:root:PassingDataObject: nmdc:665540907b390617ac1faf74cf098376 -INFO:root:PassingDataObject: nmdc:4baceb22e48bfb5f52634daf3c51e51e -INFO:root:PassingDataObject: nmdc:57af532a1629116618a3d4fed3686bdf -INFO:root:PassingDataObject: nmdc:4f4c7fa43b5818bd52f557ec06cc18ac INFO:root:PassingDataObject: nmdc:821cb81824d9c23b68158b551ae72b3e -INFO:root:PassingDataObject: nmdc:44ecb2b9e5907eb94650ab1f91a2784b -INFO:root:PassingDataObject: nmdc:9e03ba2bf4c0d8849c7965df926eb070 -INFO:root:PassingDataObject: nmdc:62831e238608a46aa0ca3e9d4407914a -INFO:root:PassingDataObject: nmdc:10a0b63f8d35f476f04085c2c15ec9e4 -INFO:root:PassingDataObject: nmdc:4e82bc9ac08a149f468de9fa0daecb0f INFO:root:PassingDataObject: nmdc:17f6ceed65203ea9821d3896e52cc15b -INFO:root:PassingDataObject: nmdc:71ee46b186299cb5efb4f161c5aef79b +INFO:root:PassingDataObject: nmdc:4f4c7fa43b5818bd52f557ec06cc18ac +INFO:root:PassingDataObject: nmdc:1f3b33d09467adde5c13336fd93dd6f5 +INFO:root:PassingDataObject: nmdc:4baceb22e48bfb5f52634daf3c51e51e INFO:root:PassingDataObject: nmdc:fb4f9a87de062a917bdecbf42f7decda -INFO:root:PassingDataObject: nmdc:7599796ef8a4c2207b1c74f2f70a47c9 +INFO:root:PassingDataObject: nmdc:10a0b63f8d35f476f04085c2c15ec9e4 +INFO:root:PassingDataObject: nmdc:62831e238608a46aa0ca3e9d4407914a +INFO:root:PassingDataObject: nmdc:bf82e812ddf8e7568c0c0051ddbe470e +INFO:root:PassingDataObject: nmdc:9e03ba2bf4c0d8849c7965df926eb070 INFO:root:PassingDataObject: nmdc:1493c5386aa59ec81810fe4bf3d366eb -INFO:root:PassingDataObject: nmdc:1f3b33d09467adde5c13336fd93dd6f5 +INFO:root:PassingDataObject: nmdc:57af532a1629116618a3d4fed3686bdf +INFO:root:PassingDataObject: nmdc:71ee46b186299cb5efb4f161c5aef79b +INFO:root:PassingDataObject: nmdc:44ecb2b9e5907eb94650ab1f91a2784b +INFO:root:PassingDataObject: nmdc:7599796ef8a4c2207b1c74f2f70a47c9 +INFO:root:PassingDataObject: nmdc:896e17c421d5cd7bb30f280cd6b4ff5a +INFO:root:PassingDataObject: nmdc:d36b8586ec9cab108a3c69e06ad88a4a +INFO:root:PassingDataObject: nmdc:665540907b390617ac1faf74cf098376 +INFO:root:PassingDataObject: nmdc:4e82bc9ac08a149f468de9fa0daecb0f INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213364 INFO:root:found 1 records INFO:root:record: nmdc:c814a61c3b6db425d1be7c1130f7d74a, MAGs Analysis Activity for nmdc:mga03974 INFO:root:PassingDataObject: nmdc:fed9d7bcb70d5d9e80cd4122212c3ab8 INFO:root:PassingDataObject: nmdc:c6a104661825daa422e25c3ed058c399 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213364 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-xzrs8q03 INFO:root:legacy_id: gold:Gp0213371 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-xzrs8q03 +INFO:root:Adding OmicsProcessing Metagenome Raw Reads has_output DataObject:nmdc:22afa3d49b73eaec2e9787a6b88fbdc3 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, Read QC Activity for nmdc:mga0vx38 -INFO:root:PassingDataObject: nmdc:71528f677698dd6657ea7ddcc3105184 INFO:root:PassingDataObject: nmdc:f107af0a000ec0b90e157fc09473c337 +INFO:root:PassingDataObject: nmdc:71528f677698dd6657ea7ddcc3105184 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, Readbased Analysis Activity for nmdc:mga0vx38 -INFO:root:PassingDataObject: nmdc:b5e611fda82e08c4f002a38bc71066fc INFO:root:PassingDataObject: nmdc:f5739a086e797487fdaa68c071642442 +INFO:root:PassingDataObject: nmdc:c192f8b1fe0cd1348659af4d81ec1d48 INFO:root:PassingDataObject: nmdc:bd8140150b0e48fe4362a5913e6b9da2 +INFO:root:PassingDataObject: nmdc:5e5e80996fc502919f163e2d31ecc4a4 INFO:root:PassingDataObject: nmdc:6af7a12aa288d87b1e9076bb1f68e81e -INFO:root:PassingDataObject: nmdc:c192f8b1fe0cd1348659af4d81ec1d48 INFO:root:PassingDataObject: nmdc:36092d7c1c12826904bc9f9553eba0ae INFO:root:PassingDataObject: nmdc:3453c837bad5cfc5b37ec0f6b40772c7 -INFO:root:PassingDataObject: nmdc:5e5e80996fc502919f163e2d31ecc4a4 INFO:root:PassingDataObject: nmdc:a4ea037d55cc51cf0755a93b39065c8d +INFO:root:PassingDataObject: nmdc:b5e611fda82e08c4f002a38bc71066fc INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, Assembly Activity for nmdc:mga0vx38 -INFO:root:PassingDataObject: nmdc:3fc528f0105fc163876d68df26d35b29 INFO:root:PassingDataObject: nmdc:c3298d022868e8b0e7cfb783015b93ed -INFO:root:PassingDataObject: nmdc:220c85a9e2d470157aed7a7556f85656 INFO:root:PassingDataObject: nmdc:37573bca240f88091720ae61ae5c9452 +INFO:root:PassingDataObject: nmdc:220c85a9e2d470157aed7a7556f85656 +INFO:root:PassingDataObject: nmdc:3fc528f0105fc163876d68df26d35b29 INFO:root:PassingDataObject: nmdc:da186671c5a581af0a7d195bd857c871 INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, Annotation Activity for nmdc:mga0vx38 -INFO:root:PassingDataObject: nmdc:7336ecf1f0b47e6161b52aec01d56ab8 -INFO:root:PassingDataObject: nmdc:45743fa49c9e798771285daafa4282a8 -INFO:root:PassingDataObject: nmdc:7059a9060fa1c387109bd687f5185789 +INFO:root:PassingDataObject: nmdc:4d41794368ed796500bb6d2c82a6787a +INFO:root:PassingDataObject: nmdc:551a7f35ff12bcd874c84b38c2adbceb INFO:root:PassingDataObject: nmdc:ca06b1f1d9661a8bc574be6d9e88ea61 +INFO:root:PassingDataObject: nmdc:62b6efaf7d8a21c60dd6604b04ab4c14 INFO:root:PassingDataObject: nmdc:794ad11fd53f99ab3801227614b4ec3b INFO:root:PassingDataObject: nmdc:6aa2609c12ebfd17d481772725a4ea10 -INFO:root:PassingDataObject: nmdc:62b6efaf7d8a21c60dd6604b04ab4c14 -INFO:root:PassingDataObject: nmdc:4d41794368ed796500bb6d2c82a6787a +INFO:root:PassingDataObject: nmdc:a8e41f5700ab72a4f61f3d1dd45285c8 INFO:root:PassingDataObject: nmdc:de7b26c212d063e5e0d2b47378252d4b -INFO:root:PassingDataObject: nmdc:551a7f35ff12bcd874c84b38c2adbceb INFO:root:PassingDataObject: nmdc:3c18be56eef0b4cdbc514764cb724f06 -INFO:root:PassingDataObject: nmdc:a8e41f5700ab72a4f61f3d1dd45285c8 +INFO:root:PassingDataObject: nmdc:7336ecf1f0b47e6161b52aec01d56ab8 +INFO:root:PassingDataObject: nmdc:45743fa49c9e798771285daafa4282a8 +INFO:root:PassingDataObject: nmdc:7059a9060fa1c387109bd687f5185789 INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213371 INFO:root:found 1 records INFO:root:record: nmdc:fdefb3fa15098906cf788f5cadf17bb3, MAGs Analysis Activity for nmdc:mga0vx38 INFO:root:PassingDataObject: nmdc:52309bf9398a5b0c401e1e23f5e414df -INFO:root:PassingDataObject: nmdc:4d12e1cab7ee7e72ea48151dfc0354c6 +INFO:root:PassingDataObject: nmdc:38f5521b558377503f6e9a635998dd37 +INFO:root:PassingDataObject: nmdc:77b1712067645b362aee53aad59000e2 +INFO:root:PassingDataObject: nmdc:cf96331e23aa34224990105374272877 ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fdefb3fa15098906cf788f5cadf17bb3 -ERROR:root:FailedDataObject: nmdc:77b1712067645b362aee53aad59000e2, -ERROR:root:FailedDataObject: nmdc:38f5521b558377503f6e9a635998dd37, -ERROR:root:FailedDataObject: nmdc:cf96331e23aa34224990105374272877, +ERROR:root:FailedDataObject: nmdc:4d12e1cab7ee7e72ea48151dfc0354c6, ERROR:root:failing_data_objects: 5 ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fdefb3fa15098906cf788f5cadf17bb3, MAGs Analysis Activity for nmdc:mga0vx38 ERROR:root:FailedRecords: mags_activity_set, 1 @@ -6380,124 +7091,138 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213371 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-99yaxg68 INFO:root:legacy_id: gold:Gp0213366 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-99yaxg68 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:44cd635395e777cfab314dcf1789b6d2 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, Read QC Activity for nmdc:mga0v125 INFO:root:PassingDataObject: nmdc:67cf17c1877adeb676aaa9acbb5ebd1d INFO:root:PassingDataObject: nmdc:453c4158334fce0c0e59016e4e490ee6 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, ReadBased Analysis Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:fd217c1029305d2cd04cbd0d6ac77771 -INFO:root:PassingDataObject: nmdc:338a51da00bcde29704b45d83ca72b77 -INFO:root:PassingDataObject: nmdc:3b4e0bc10933d603310e2d6212bd8368 INFO:root:PassingDataObject: nmdc:27fc91488f58bb21ed6b66d2ca9cba4b -INFO:root:PassingDataObject: nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 INFO:root:PassingDataObject: nmdc:8ab8214f4c30e07cd531a1047382ccdf +INFO:root:PassingDataObject: nmdc:338a51da00bcde29704b45d83ca72b77 INFO:root:PassingDataObject: nmdc:e62ccb864b04c2baca7414ef6492c477 INFO:root:PassingDataObject: nmdc:39fc17e9230b7fe2277c4ed72dc2461f +INFO:root:PassingDataObject: nmdc:3b4e0bc10933d603310e2d6212bd8368 +INFO:root:PassingDataObject: nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 INFO:root:PassingDataObject: nmdc:3e903718c24ca349fe79cb1dccadcbf9 +INFO:root:PassingDataObject: nmdc:fd217c1029305d2cd04cbd0d6ac77771 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, Assembly Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:509f019239f76b362c8dd1173b5214c9 -INFO:root:PassingDataObject: nmdc:c9d2d7339276f5fc81900d29993683bb -INFO:root:PassingDataObject: nmdc:83b0c3cc24d26bd4096faa73c75c3f8e INFO:root:PassingDataObject: nmdc:e5e994e4ff88dd575d1e36f0d4405482 +INFO:root:PassingDataObject: nmdc:c9d2d7339276f5fc81900d29993683bb INFO:root:PassingDataObject: nmdc:29fc76a89051f8736f4282f4db3e32d7 +INFO:root:PassingDataObject: nmdc:509f019239f76b362c8dd1173b5214c9 +INFO:root:PassingDataObject: nmdc:83b0c3cc24d26bd4096faa73c75c3f8e INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, Annotation Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:ec8039784e10e81d952894d381eaab06 +INFO:root:PassingDataObject: nmdc:055875f69824062a7ec30e5ab473a7fc INFO:root:PassingDataObject: nmdc:21f9944bd641eb70fef619fc3260d51d -INFO:root:PassingDataObject: nmdc:83614a591ea8b644126c756c7fa0368f -INFO:root:PassingDataObject: nmdc:59347f89b33779eb9d75480ba8f433bd -INFO:root:PassingDataObject: nmdc:3d37d679f478ebbe7cc050d6b3d2acc4 -INFO:root:PassingDataObject: nmdc:e884c8cabf071bceb75dec821064e5ab -INFO:root:PassingDataObject: nmdc:7455c629d77eb6ed24483fd3b4e11ed4 INFO:root:PassingDataObject: nmdc:5b80d37aef07d40b54eeed45adadc772 +INFO:root:PassingDataObject: nmdc:b0f3d05964047ce0f81ba66ed64ea4f1 INFO:root:PassingDataObject: nmdc:3b8bed1b090a474890239dada083289e -INFO:root:PassingDataObject: nmdc:055875f69824062a7ec30e5ab473a7fc -INFO:root:PassingDataObject: nmdc:38c59465d2b238d6f999e1278454622c -INFO:root:PassingDataObject: nmdc:e5cdd8cd681ccc95d213b4f48f7c6099 INFO:root:PassingDataObject: nmdc:87464195b06f111c8009116308a650a5 -INFO:root:PassingDataObject: nmdc:6d564782afdf7bc5a73c22bd069232fd INFO:root:PassingDataObject: nmdc:a64311c20426520fc942e3db57cdb73f -INFO:root:PassingDataObject: nmdc:8ce28cfa92bf75b171659b3dbb1ca3cb +INFO:root:PassingDataObject: nmdc:38c59465d2b238d6f999e1278454622c +INFO:root:PassingDataObject: nmdc:3d37d679f478ebbe7cc050d6b3d2acc4 INFO:root:PassingDataObject: nmdc:1d8852d8390a8dd985a6ff44369f5062 +INFO:root:PassingDataObject: nmdc:e5cdd8cd681ccc95d213b4f48f7c6099 INFO:root:PassingDataObject: nmdc:57af946dfc2c16d1c15643722ed54389 -INFO:root:PassingDataObject: nmdc:b0f3d05964047ce0f81ba66ed64ea4f1 +INFO:root:PassingDataObject: nmdc:83614a591ea8b644126c756c7fa0368f +INFO:root:PassingDataObject: nmdc:7455c629d77eb6ed24483fd3b4e11ed4 +INFO:root:PassingDataObject: nmdc:ec8039784e10e81d952894d381eaab06 +INFO:root:PassingDataObject: nmdc:e884c8cabf071bceb75dec821064e5ab +INFO:root:PassingDataObject: nmdc:6d564782afdf7bc5a73c22bd069232fd +INFO:root:PassingDataObject: nmdc:59347f89b33779eb9d75480ba8f433bd +INFO:root:PassingDataObject: nmdc:8ce28cfa92bf75b171659b3dbb1ca3cb INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213366 INFO:root:found 1 records INFO:root:record: nmdc:fa1a0488d644f315d70f72be2890c210, MAGs Analysis Activity for nmdc:mga0v125 -INFO:root:PassingDataObject: nmdc:eac3cce3b42a88f6c15db9d51300b654 INFO:root:PassingDataObject: nmdc:8d07136f2421560db99f4a72ffa05a88 +INFO:root:PassingDataObject: nmdc:eac3cce3b42a88f6c15db9d51300b654 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213366 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-6xbw1f88 INFO:root:legacy_id: gold:Gp0213372 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-6xbw1f88 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:995c8b403d4ae43206bcd9cb0168d7a7 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, Read QC Activity for nmdc:mga0ap42 -INFO:root:PassingDataObject: nmdc:d98a508ec377e189bf67fcc3431e8b88 INFO:root:PassingDataObject: nmdc:3a37b36f633811e92deca2b8825a5c21 +INFO:root:PassingDataObject: nmdc:d98a508ec377e189bf67fcc3431e8b88 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, ReadBased Analysis Activity for nmdc:mga0ap42 INFO:root:PassingDataObject: nmdc:3fb3515d3cd4bc9c971745ad9e5a4408 INFO:root:PassingDataObject: nmdc:428b3ab09a9031d1fbd466c45aaaeca6 -INFO:root:PassingDataObject: nmdc:ea19d630f32fa0891964ab3bde5f893e INFO:root:PassingDataObject: nmdc:8787e5f46555ffac92b9a21be6d3a463 +INFO:root:PassingDataObject: nmdc:ea19d630f32fa0891964ab3bde5f893e INFO:root:PassingDataObject: nmdc:e37082ea33aa54468afde0c0e6cb59f2 -INFO:root:PassingDataObject: nmdc:0f5b9a1d0957b879d0c82e9f2a11914f -INFO:root:PassingDataObject: nmdc:dc700ccae8797c8c7ce770b2210bd290 INFO:root:PassingDataObject: nmdc:36bd9a52ed3e442caebd9f28f415a941 +INFO:root:PassingDataObject: nmdc:dc700ccae8797c8c7ce770b2210bd290 +INFO:root:PassingDataObject: nmdc:0f5b9a1d0957b879d0c82e9f2a11914f INFO:root:PassingDataObject: nmdc:f3f5c2553674a92ac266ba10f691fe5e INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, Assembly Activity for nmdc:mga0ap42 +INFO:root:PassingDataObject: nmdc:dc257584ae17f52d32a01e9a1d50c0fd +INFO:root:PassingDataObject: nmdc:9345663cca27d20f5657dad69d175d37 +INFO:root:PassingDataObject: nmdc:26026229fd13197a44f11b85645edd43 INFO:root:PassingDataObject: nmdc:96435c6e9802f9ad5987d851d22abaa0 INFO:root:PassingDataObject: nmdc:03fc202448c65de6e565ac5692b8dc99 -INFO:root:PassingDataObject: nmdc:26026229fd13197a44f11b85645edd43 -INFO:root:PassingDataObject: nmdc:9345663cca27d20f5657dad69d175d37 -INFO:root:PassingDataObject: nmdc:dc257584ae17f52d32a01e9a1d50c0fd INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, Annotation Activity for nmdc:mga0ap42 -INFO:root:PassingDataObject: nmdc:eeab4d6cc82a75218795a2d992612204 -INFO:root:PassingDataObject: nmdc:d57800764027e6763e46c50bcfc137c1 +INFO:root:PassingDataObject: nmdc:98fd8c5d6f4d922fe4c9140049f56ef6 INFO:root:PassingDataObject: nmdc:44c8cbcf4a48eef705d2bdee67371784 +INFO:root:PassingDataObject: nmdc:d45fc0f7e8272fabaa68cf6bd2d83c55 +INFO:root:PassingDataObject: nmdc:10a866d809881e682b8920bec30837b6 INFO:root:PassingDataObject: nmdc:469ebbfd091f01480286eeaa0bbb1c13 -INFO:root:PassingDataObject: nmdc:7015c089aa313f5ba841378235f569ce -INFO:root:PassingDataObject: nmdc:6856624f6c1fdd1e6c9f2864745514ba -INFO:root:PassingDataObject: nmdc:98fd8c5d6f4d922fe4c9140049f56ef6 -INFO:root:PassingDataObject: nmdc:e3459b7b9478a2e0df4e7f605abd1ed0 +INFO:root:PassingDataObject: nmdc:5c6a5a400c937e15953de2580846cb22 +INFO:root:PassingDataObject: nmdc:010f4858bcefce46fc26889434d7d335 +INFO:root:PassingDataObject: nmdc:8dacb55ac57abfcde6325f2ce80c8499 INFO:root:PassingDataObject: nmdc:bf6a229cf031291ce6285012ba41b376 -INFO:root:PassingDataObject: nmdc:3910f577000a01c85414cee1e4a2da8a INFO:root:PassingDataObject: nmdc:5a9f8954931e5972ae56a5476d7338c4 +INFO:root:PassingDataObject: nmdc:eeab4d6cc82a75218795a2d992612204 +INFO:root:PassingDataObject: nmdc:e3459b7b9478a2e0df4e7f605abd1ed0 INFO:root:PassingDataObject: nmdc:5798ceed4f115a355a5a6ddad082f010 -INFO:root:PassingDataObject: nmdc:8dacb55ac57abfcde6325f2ce80c8499 -INFO:root:PassingDataObject: nmdc:10a866d809881e682b8920bec30837b6 -INFO:root:PassingDataObject: nmdc:d45fc0f7e8272fabaa68cf6bd2d83c55 -INFO:root:PassingDataObject: nmdc:010f4858bcefce46fc26889434d7d335 +INFO:root:PassingDataObject: nmdc:d57800764027e6763e46c50bcfc137c1 INFO:root:PassingDataObject: nmdc:f4e7c59ca6633994096fbc7464ea6632 +INFO:root:PassingDataObject: nmdc:7015c089aa313f5ba841378235f569ce +INFO:root:PassingDataObject: nmdc:6856624f6c1fdd1e6c9f2864745514ba INFO:root:PassingDataObject: nmdc:e261092309b050fad929ee61da3295be -INFO:root:PassingDataObject: nmdc:5c6a5a400c937e15953de2580846cb22 +INFO:root:PassingDataObject: nmdc:3910f577000a01c85414cee1e4a2da8a INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0213372 INFO:root:found 1 records INFO:root:record: nmdc:78e9f2c178e9ab173098ff3bf9a47d24, MAGs Analysis Activity for nmdc:mga0ap42 INFO:root:PassingDataObject: nmdc:fc310732a458ea26a27b32e6621cbfd4 INFO:root:PassingDataObject: nmdc:80452e826047a4fdbc211f6a5d936569 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0213372 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-n4kebh34 @@ -6606,67 +7331,74 @@ INFO:root:omics_processing_record: nmdc:omprc-11-h4mwph38 INFO:root:legacy_id: emsl:598852 INFO:root:omics_processing_record: nmdc:omprc-11-hxcj5q62 INFO:root:legacy_id: gold:Gp0208380 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-hxcj5q62 +INFO:root:Adding OmicsProcessing Metagenome Raw Reads has_output DataObject:nmdc:849a332324e4c8e23d5487d866ea8ac3 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208380 INFO:root:found 1 records INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, Read QC Activity for nmdc:mga03295 INFO:root:PassingDataObject: nmdc:c37ac17298f27be2fb79df5c9fd6cd9e INFO:root:PassingDataObject: nmdc:2c50be41e97736244d5161d984422a2d INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0208380 INFO:root:found 1 records INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, ReadBased Analysis Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:b61b15ddd0a879bede3b73471849a3a4 -INFO:root:PassingDataObject: nmdc:cbb6016f57f643796497809739dc31c6 +INFO:root:PassingDataObject: nmdc:59a25ae32482a78fc21a817b4c551da7 INFO:root:PassingDataObject: nmdc:fd615655a16d0631c00edfb1b4794b8a -INFO:root:PassingDataObject: nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 -INFO:root:PassingDataObject: nmdc:e5818a24d6afb5332a741be700acc060 +INFO:root:PassingDataObject: nmdc:b61b15ddd0a879bede3b73471849a3a4 +INFO:root:PassingDataObject: nmdc:c2ff0fa755825ef34d1e16a446a5ae6b INFO:root:PassingDataObject: nmdc:dbc5139e3c05806778ab3450dbcb63ba -INFO:root:PassingDataObject: nmdc:59a25ae32482a78fc21a817b4c551da7 +INFO:root:PassingDataObject: nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 INFO:root:PassingDataObject: nmdc:6548fd3eb77efb01cdabcfeb8817057f -INFO:root:PassingDataObject: nmdc:c2ff0fa755825ef34d1e16a446a5ae6b +INFO:root:PassingDataObject: nmdc:cbb6016f57f643796497809739dc31c6 +INFO:root:PassingDataObject: nmdc:e5818a24d6afb5332a741be700acc060 INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 INFO:root:set_name: metagenome_assembly_set for gold:Gp0208380 INFO:root:found 1 records INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, Assembly Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:08c46e594044bd99912767da0ab6c912 INFO:root:PassingDataObject: nmdc:02ee0361c81b2a216d2688d14bbd444c +INFO:root:PassingDataObject: nmdc:8977a29ea63d280856e001d59a74786f INFO:root:PassingDataObject: nmdc:56ec99c49845a93cfdab5386b4fbae00 +INFO:root:PassingDataObject: nmdc:08c46e594044bd99912767da0ab6c912 INFO:root:PassingDataObject: nmdc:5e0c8d776a3f21d577c5ab013ecbf07c -INFO:root:PassingDataObject: nmdc:8977a29ea63d280856e001d59a74786f INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208380 INFO:root:found 1 records INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, Annotation Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:be82ecb0abfd22ff863c2d68ab36e2f4 -INFO:root:PassingDataObject: nmdc:410cb5de7e63a5e0d5c8f9b672053252 +INFO:root:PassingDataObject: nmdc:2dcbd68530370e00685f8b30b20b08fb INFO:root:PassingDataObject: nmdc:4542683c6d730da02efd5bae4107babf -INFO:root:PassingDataObject: nmdc:50ad99e5f5fb8de826ba4381caa0580a -INFO:root:PassingDataObject: nmdc:48b2dec211a9824c41491abbe2a3a970 -INFO:root:PassingDataObject: nmdc:dbdeeaad2fbb9650224c9169ab7e94b1 -INFO:root:PassingDataObject: nmdc:b2eb8cdc081303695b833c7a85524399 -INFO:root:PassingDataObject: nmdc:c2697b7c25dde3471a3056f61fd14f51 -INFO:root:PassingDataObject: nmdc:a7629d4fdd08a63238d65de64cc79210 -INFO:root:PassingDataObject: nmdc:34a1e7f3bb0aab9173dc737edbe91e7d INFO:root:PassingDataObject: nmdc:df59e6e6703872168b18347cf11d6cae -INFO:root:PassingDataObject: nmdc:c1befb717d59ac6b571abad914104a6d +INFO:root:PassingDataObject: nmdc:40364d2c546ec1d6c515017616750d71 +INFO:root:PassingDataObject: nmdc:a7629d4fdd08a63238d65de64cc79210 +INFO:root:PassingDataObject: nmdc:381a1a6e5fbd59a2386400c0c664dd20 +INFO:root:PassingDataObject: nmdc:f193b3aa402724d4f3ad6b3636e1a89c +INFO:root:PassingDataObject: nmdc:b2eb8cdc081303695b833c7a85524399 +INFO:root:PassingDataObject: nmdc:50ad99e5f5fb8de826ba4381caa0580a INFO:root:PassingDataObject: nmdc:c881711b86265f78ec78b8e3310bd0b1 INFO:root:PassingDataObject: nmdc:df76b1232bb3c791dd771f9824495a40 -INFO:root:PassingDataObject: nmdc:381a1a6e5fbd59a2386400c0c664dd20 -INFO:root:PassingDataObject: nmdc:40364d2c546ec1d6c515017616750d71 -INFO:root:PassingDataObject: nmdc:2dcbd68530370e00685f8b30b20b08fb +INFO:root:PassingDataObject: nmdc:c1befb717d59ac6b571abad914104a6d INFO:root:PassingDataObject: nmdc:6e0a5497d5d363786de3d83e57550114 -INFO:root:PassingDataObject: nmdc:f193b3aa402724d4f3ad6b3636e1a89c +INFO:root:PassingDataObject: nmdc:dbdeeaad2fbb9650224c9169ab7e94b1 +INFO:root:PassingDataObject: nmdc:be82ecb0abfd22ff863c2d68ab36e2f4 +INFO:root:PassingDataObject: nmdc:48b2dec211a9824c41491abbe2a3a970 +INFO:root:PassingDataObject: nmdc:c2697b7c25dde3471a3056f61fd14f51 +INFO:root:PassingDataObject: nmdc:34a1e7f3bb0aab9173dc737edbe91e7d +INFO:root:PassingDataObject: nmdc:410cb5de7e63a5e0d5c8f9b672053252 INFO:root:passing_data_objects: 19 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 INFO:root:set_name: mags_activity_set for gold:Gp0208380 INFO:root:found 2 records INFO:root:record: nmdc:78f8bf24916f01d053378b1bd464cd8a, MAGs Analysis Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:bc11ad49f3db9e069ed6d3395852182e INFO:root:PassingDataObject: nmdc:328375b6a823fa19b1d96762c383fc8a +INFO:root:PassingDataObject: nmdc:bc11ad49f3db9e069ed6d3395852182e INFO:root:passing_data_objects: 2 INFO:root:record: nmdc:061846685755316cd5f20d4035212ba1, MAGs Analysis Activity for nmdc:mga03295 -INFO:root:PassingDataObject: nmdc:76f8131bebe2a014b5accac2cef83c14 INFO:root:PassingDataObject: nmdc:31be7b9b32e0dffbc4caf64599fbe701 +INFO:root:PassingDataObject: nmdc:76f8131bebe2a014b5accac2cef83c14 INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 2 INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208380 INFO:root:found 0 records INFO:root:omics_processing_record: nmdc:omprc-11-fgk9dq91 @@ -6705,13 +7437,15 @@ INFO:root:omics_processing_record: nmdc:omprc-11-5a865480 INFO:root:legacy_id: emsl:598512 INFO:root:omics_processing_record: nmdc:omprc-12-bvb4y624 INFO:root:legacy_id: gold:Gp0208343 -ERROR:root:No has_output for nmdc:omprc-12-bvb4y624 +WARNING:root:No has_output for nmdc:omprc-12-bvb4y624 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:5fb0c72649ce78d0b58cc0321c8a331c for nmdc:omprc-12-bvb4y624 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208343 INFO:root:found 1 records INFO:root:record: nmdc:839560f9650622f232c262d8cf7a9db9, Read QC Activity for nmdc_mta0mz25 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Read QC Activity for nmdc_mta0mz25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a927ae901e3265faf0eb08405eb272e8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e27eb36ed79bced1e7e5e0d52edc0c02,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a927ae901e3265faf0eb08405eb272e8,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Read QC Activity for nmdc_mta0mz25 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -6729,28 +7463,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208343 INFO:root:found 1 records INFO:root:record: nmdc:839560f9650622f232c262d8cf7a9db9, Annotation Activity for nmdc_mta0mz25 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Annotation Activity for nmdc_mta0mz25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d01e22457d62369a8620db05c8de2fde,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e7f1740a77a422e5b11caa722a8b05b8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a734263be826057a5345d6f42347a36,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0ced42cf7239ea433818a126436722cd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e5896c116be736de57354b4ca9182a88,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b291a7a8f73c5a0782bf77316e52b642,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5b329935ba422d075f7513bcc792f503,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:19fd8fdd362abed773947131e5ba4063,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d8eae217c6284ec6f57524dc5d72302f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:783ad3db93bf7a771e6e6cf4d4c9aae7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:75d972cc97a6b190e2b502e0c86819ed,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f29d6ef02d04f7db21dc81ea21941cd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a734263be826057a5345d6f42347a36,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be9bd19e034bd5c54d5afd3b4e71c6ec,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f29d6ef02d04f7db21dc81ea21941cd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e5896c116be736de57354b4ca9182a88,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60b947e577aecffdaa8c88273047ebf1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db4d48b9af6477815910c9ac3e625031,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e7f1740a77a422e5b11caa722a8b05b8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d8eae217c6284ec6f57524dc5d72302f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:19fd8fdd362abed773947131e5ba4063,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5e7960f48d0eb30fa26ccaf54fa5d061,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f3d7293037e5032a924ad214560e8bce,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db4d48b9af6477815910c9ac3e625031,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:783ad3db93bf7a771e6e6cf4d4c9aae7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:779f21c6a8cf90d2a7c9a5e9d1de6285,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:031173fefe4457e18d92bb56b9c8aada,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d01e22457d62369a8620db05c8de2fde,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:675620f554ce6d4365da4e0d803a7926,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b291a7a8f73c5a0782bf77316e52b642,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1ce872de9133258b8599643c4437c84d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5e7960f48d0eb30fa26ccaf54fa5d061,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:75d972cc97a6b190e2b502e0c86819ed,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0ced42cf7239ea433818a126436722cd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:031173fefe4457e18d92bb56b9c8aada,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:045244c6eb37b071a3c6cf7cf3bcf9fc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1ce872de9133258b8599643c4437c84d,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Annotation Activity for nmdc_mta0mz25 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -6760,20 +7494,22 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208343 INFO:root:found 1 records INFO:root:record: nmdc:839560f9650622f232c262d8cf7a9db9, Metatranscriptome Activity for nmdc_mta0mz25 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Metatranscriptome Activity for nmdc_mta0mz25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cc3818746b67f3a5aa33859662bb1790,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:aea2bd22b9f7df9dedbf9e5927828a2b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cc3818746b67f3a5aa33859662bb1790,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:839560f9650622f232c262d8cf7a9db9, Metatranscriptome Activity for nmdc_mta0mz25 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-xtfkpp14 INFO:root:legacy_id: gold:Gp0208346 -ERROR:root:No has_output for nmdc:omprc-12-xtfkpp14 +WARNING:root:No has_output for nmdc:omprc-12-xtfkpp14 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:1ab12b7bb6ccaf86e161ffcaa5e56b03 for nmdc:omprc-12-xtfkpp14 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208346 INFO:root:found 1 records INFO:root:record: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Read QC Activity for nmdc_mta0bp43 ERROR:root:OmicsMissingHasOutput: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Read QC Activity for nmdc_mta0bp43 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:70c2015a00bee8466578b5ae4e4fe4f1,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:95aa580d28e09c2ea8436487fe56476a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:70c2015a00bee8466578b5ae4e4fe4f1,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Read QC Activity for nmdc_mta0bp43 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -6791,28 +7527,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208346 INFO:root:found 1 records INFO:root:record: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Annotation Activity for nmdc_mta0bp43 ERROR:root:OmicsMissingHasOutput: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Annotation Activity for nmdc_mta0bp43 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3add832c244ac707500f3c07c7d16a10,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:23ca2b9589d5c0d5e6b18a85ed9f7519,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:278df0c78b628ee95b87f7c553ade1b4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fd54915b7800c8a8bb4884bc77fbccd2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5146cbb42881769bc81f0eb8818ba603,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:746fe52f2a82a9b867791a2d98cc5eab,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da93f96d36788806d18a4cc10c96bf03,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:779ec49a86ea6a0e198b7bf2ca44bdf2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3e80fa87a622f7594b091d428c3e1960,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:278df0c78b628ee95b87f7c553ade1b4,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e12e8ba76223486394b294549ae281e3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:af13bd0add2530dfa822a269fe602ae8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5dcdbf256b4a775bb42cab94e7838e0d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a2791406bbb5b6d2363f1bce58f722e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:739f3c150c722c173fdafcf0215c11d2,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0bdebf77ff6c3a127c2956999af4374e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c5ab98d6f4fd49333bfe69be6eb393ab,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:91af710e3af010d6659a24f8d59bf396,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3add832c244ac707500f3c07c7d16a10,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f086b8ad6d1a14c221a6120bc49de62,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0d92710a4549a56ed84f5d58283eb8c0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5327480c05caa3c6e14233161aa884a5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:746fe52f2a82a9b867791a2d98cc5eab,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a2791406bbb5b6d2363f1bce58f722e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fe7f883ffaba5bfbb2b6f838ca67808b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fd54915b7800c8a8bb4884bc77fbccd2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:23ca2b9589d5c0d5e6b18a85ed9f7519,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5146cbb42881769bc81f0eb8818ba603,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:91af710e3af010d6659a24f8d59bf396,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5327480c05caa3c6e14233161aa884a5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:739f3c150c722c173fdafcf0215c11d2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3e80fa87a622f7594b091d428c3e1960,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5dcdbf256b4a775bb42cab94e7838e0d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f086b8ad6d1a14c221a6120bc49de62,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:714470a9199df55a561b60c1411a1662,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:af13bd0add2530dfa822a269fe602ae8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c5ab98d6f4fd49333bfe69be6eb393ab,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e12e8ba76223486394b294549ae281e3,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Annotation Activity for nmdc_mta0bp43 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -6822,20 +7558,22 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208346 INFO:root:found 1 records INFO:root:record: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Metatranscriptome Activity for nmdc_mta0bp43 ERROR:root:OmicsMissingHasOutput: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Metatranscriptome Activity for nmdc_mta0bp43 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1cec3336ccda4b7e3aec2ad467f34115,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b5690207ef50fe3f7293c7e91c37f1a2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1cec3336ccda4b7e3aec2ad467f34115,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:0bb611d10d2e0ae7788d98d434d3068f, Metatranscriptome Activity for nmdc_mta0bp43 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-qnyevs35 INFO:root:legacy_id: gold:Gp0208353 -ERROR:root:No has_output for nmdc:omprc-12-qnyevs35 +WARNING:root:No has_output for nmdc:omprc-12-qnyevs35 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:81179f0a1b0a2a6431ba6b8ab02b0191 for nmdc:omprc-12-qnyevs35 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208353 INFO:root:found 1 records INFO:root:record: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Read QC Activity for nmdc_mta0y710 ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Read QC Activity for nmdc_mta0y710 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9693c777d829604ac5716e535bbbedec,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c59435e210b5e57d4ded4ef8b06acb9a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9693c777d829604ac5716e535bbbedec,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Read QC Activity for nmdc_mta0y710 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -6853,28 +7591,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208353 INFO:root:found 1 records INFO:root:record: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Annotation Activity for nmdc_mta0y710 ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Annotation Activity for nmdc_mta0y710 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7c15b3f5c727b77ce83dc87892dc38b5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e3745d790f48b24f09f3141930e2c761,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3c3fe812447660bc12465c2df5345925,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4ee8b76971c15b7e07a705b82690aa04,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:738cead92f0e2d9e74c69c87bceb5b8e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f547f8748b40ec00340ca3b13aa934e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7b3cad772656e6b1aa3947ba357f6403,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eaff2a1b501daf396137f5ee802672b5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fcc62bedab15fe204e7627a18ad34be3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:162c59683c9edd99db6516802c5f2d79,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45112eb4a07b17c0d88849438b3837fb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e036fd267df6855191e94d40f4ee0522,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:282b4dd34fee96e8ae74bb3d7499d5d2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:28c7df45602b74f72a45f01f960fd2a4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:13ec6f6ece8b9320c4e1850cc743840a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45112eb4a07b17c0d88849438b3837fb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:34a187c72552d9fc1660874561f61d8f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fcc62bedab15fe204e7627a18ad34be3,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7996d384eabe8f8f41f5ffe3215391e0,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eaff2a1b501daf396137f5ee802672b5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:28c7df45602b74f72a45f01f960fd2a4,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7a2e108c95e7794f7a8d10ed9b7b5956,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:13ec6f6ece8b9320c4e1850cc743840a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45bae9cf879af44241073d4b50e20e03,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e036fd267df6855191e94d40f4ee0522,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4ee8b76971c15b7e07a705b82690aa04,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a95dcad02d7c1eead345ce693d9fbbbd,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c39fea9d7933e873fcb13a6de9e0cde8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e3745d790f48b24f09f3141930e2c761,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45bae9cf879af44241073d4b50e20e03,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f72c6b02b455d45c07b0de2c2fd48b77,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a95dcad02d7c1eead345ce693d9fbbbd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3c3fe812447660bc12465c2df5345925,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:162c59683c9edd99db6516802c5f2d79,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7b3cad772656e6b1aa3947ba357f6403,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:738cead92f0e2d9e74c69c87bceb5b8e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f547f8748b40ec00340ca3b13aa934e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7c15b3f5c727b77ce83dc87892dc38b5,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Annotation Activity for nmdc_mta0y710 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -6891,13 +7629,15 @@ ERROR:root:OmicsMissingHasOutput: nmdc:418a1a5aaa0922e2b9bf476dcdcc2857, Metatra ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-1ctybv48 INFO:root:legacy_id: gold:Gp0208352 -ERROR:root:No has_output for nmdc:omprc-12-1ctybv48 +WARNING:root:No has_output for nmdc:omprc-12-1ctybv48 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:1cf305c52557833542ef65965b21036b for nmdc:omprc-12-1ctybv48 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208352 INFO:root:found 1 records INFO:root:record: nmdc:628598d00d3931793d9be69a47672642, Read QC Activity for nmdc_mta04n39 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Read QC Activity for nmdc_mta04n39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5d0e5c5938464e83276f50ccf2486b64,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eacaebfb5cdb318f3d0d5b576f437bd3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5d0e5c5938464e83276f50ccf2486b64,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Read QC Activity for nmdc_mta04n39 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -6915,28 +7655,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208352 INFO:root:found 1 records INFO:root:record: nmdc:628598d00d3931793d9be69a47672642, Annotation Activity for nmdc_mta04n39 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Annotation Activity for nmdc_mta04n39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a28a67edc2526a0e449e20b3177c9bec,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9ac0a1ef9d0a0f6d39d8e5c55d4a8b5f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be65539cf891831943072dc9490b4bcc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d3ec1f6ca834dc6ee239b6ffd86dfe34,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5bdcb3fa405de016d9ce7881ceb3b063,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:014c849aa9defca1798f5269078784b3,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f385a78a04ff119dc31a2c663940ddb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d3ec1f6ca834dc6ee239b6ffd86dfe34,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d6367cc960b6b614ba6501bb3f0ac6b9,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72fd1df03ec6105b01cdb937330b1e6f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9abdceb6e6022724fc9f8cff0276fd01,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f015add835a35c07ae9ede731c8477f3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a3fdf59899653e519c125afc1bed4041,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c8267083ddf1d65223daa5c1b5809bae,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ee7d233af5fac9e78dd5aba6eeb5a767,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b40059796731adb54202c0604a51e5bb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9689680f886b586cc8686edffad6d0c1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9abdceb6e6022724fc9f8cff0276fd01,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:240731e8e49b2710a5c07facf5fc4282,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5bdcb3fa405de016d9ce7881ceb3b063,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be65539cf891831943072dc9490b4bcc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79aebdf95dae9b7bce7f9b915383da46,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a28a67edc2526a0e449e20b3177c9bec,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a7cd72c9e460c618ee70881306041598,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:240731e8e49b2710a5c07facf5fc4282,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9689680f886b586cc8686edffad6d0c1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ee7d233af5fac9e78dd5aba6eeb5a767,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79d21fd07e51266d8813a0689f8d81f3,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d10ebb87aa28b13a062d436ef400df0a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:014c849aa9defca1798f5269078784b3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a3fdf59899653e519c125afc1bed4041,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72fd1df03ec6105b01cdb937330b1e6f,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:15eb92c9879e566744a3d0f6054bc96a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f015add835a35c07ae9ede731c8477f3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79d21fd07e51266d8813a0689f8d81f3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79aebdf95dae9b7bce7f9b915383da46,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Annotation Activity for nmdc_mta04n39 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -6946,20 +7686,22 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208352 INFO:root:found 1 records INFO:root:record: nmdc:628598d00d3931793d9be69a47672642, Metatranscriptome Activity for nmdc_mta04n39 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Metatranscriptome Activity for nmdc_mta04n39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5680ff887d7dc52ed7c9900b753cbae5,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4eed4f388b380739686e118731d052a7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5680ff887d7dc52ed7c9900b753cbae5,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:628598d00d3931793d9be69a47672642, Metatranscriptome Activity for nmdc_mta04n39 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-akxgyf36 INFO:root:legacy_id: gold:Gp0208354 -ERROR:root:No has_output for nmdc:omprc-12-akxgyf36 +WARNING:root:No has_output for nmdc:omprc-12-akxgyf36 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:9cf11a6122cc6cfbf521e0eaf7bb048f for nmdc:omprc-12-akxgyf36 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208354 INFO:root:found 1 records INFO:root:record: nmdc:897c054089e2c5b6d0584e4871428917, Read QC Activity for nmdc_mta0tj70 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Read QC Activity for nmdc_mta0tj70 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:325d8d66913cb26f7d16d2bb327101cf,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3b16638cecb2b63e4c53cddf051461bb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:325d8d66913cb26f7d16d2bb327101cf,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Read QC Activity for nmdc_mta0tj70 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -6977,28 +7719,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208354 INFO:root:found 1 records INFO:root:record: nmdc:897c054089e2c5b6d0584e4871428917, Annotation Activity for nmdc_mta0tj70 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Annotation Activity for nmdc_mta0tj70 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c67794c25404daeed98da778c7131e03,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9e79e7a5f2f8a96fdf30b44795d41196,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:536bf28b3303a1bca0309c400dc4524e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9743953751105eb74b79d25612260ca4,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2665e7fe1d5680c5f6d24425cc5f3d37,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2f410fe030eaa169d19b70675f237e51,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1caab04eb7e04ebe1fa11a85e4cc2064,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:96aab534d0f8f851aa26ec37ea6d973b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:000c79acd89371bfa5dfc20998ab933c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2f410fe030eaa169d19b70675f237e51,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ee4bdb9f07e1732f1cfc0398105c208e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:536bf28b3303a1bca0309c400dc4524e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f844a3e66da21a96510e505e805c10b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc708ddf88c5f22728c30e37fcda88e9,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f88ffae668fbd26808fb29bd4af4238d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dce25a09e4b8924896719ab2ca860085,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c984a79194cebb70c6a42662cc209ed4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2665e7fe1d5680c5f6d24425cc5f3d37,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e9e526d4e3a0c4b39b24ee0b0457b2fd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c67794c25404daeed98da778c7131e03,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9e79e7a5f2f8a96fdf30b44795d41196,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f64e3eee3890599522e6ef6df61c7bc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9743953751105eb74b79d25612260ca4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dce25a09e4b8924896719ab2ca860085,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:68126e4e9dd64cf4f48375fdc644ea93,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0cd223fc9d6811e4491bf145a4b554ae,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f844a3e66da21a96510e505e805c10b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f88ffae668fbd26808fb29bd4af4238d,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6e1ecb3c985ddaa31a8aa9210f987933,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:68126e4e9dd64cf4f48375fdc644ea93,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f64e3eee3890599522e6ef6df61c7bc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da38b23c21ad19a9cc1b6fed358c81e1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ee4bdb9f07e1732f1cfc0398105c208e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e9e526d4e3a0c4b39b24ee0b0457b2fd,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:baae0f90f4fb9b6514c6c744768d23c0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:96aab534d0f8f851aa26ec37ea6d973b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da38b23c21ad19a9cc1b6fed358c81e1,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Annotation Activity for nmdc_mta0tj70 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7015,7 +7757,9 @@ ERROR:root:OmicsMissingHasOutput: nmdc:897c054089e2c5b6d0584e4871428917, Metatra ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-ps8c6d78 INFO:root:legacy_id: gold:Gp0208356 -ERROR:root:No has_output for nmdc:omprc-12-ps8c6d78 +WARNING:root:No has_output for nmdc:omprc-12-ps8c6d78 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:8354fbd7f0606456d2ad224d1bf21a52 for nmdc:omprc-12-ps8c6d78 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208356 INFO:root:found 1 records INFO:root:record: nmdc:17b505f7781a3f0e932e8f39f4190068, Read QC Activity for nmdc_mta0jh65 @@ -7039,28 +7783,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208356 INFO:root:found 1 records INFO:root:record: nmdc:17b505f7781a3f0e932e8f39f4190068, Annotation Activity for nmdc_mta0jh65 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Annotation Activity for nmdc_mta0jh65 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bf79c0dd90eedfbdadd9fb7a9dd861e2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9910783d0dd246264c1d79ea5062581e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:95a1acbec231282992ee26a5d834e9fb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:981ab3235c1275963332f9fda6f05f35,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2704d48673ab376c5f134322a35eb9e8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9517e0185d22e097dde35b60b66968e7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60d486789ad2bc5ef15c6cb7a14013d2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:02cbd7c8e4fd5c2b7c0367570524f0cb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:53197c9d8308cb8e0710160ba06595a7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47986f889ba8b262bd66735849566169,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c888ca7cf01a4e84a007903ac76291ed,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:85e8f8c5a3dedd7f5490358f29bcc5ef,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a8d6aa47c9c260bbac6e3ae948acd152,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7a42a01dbff36d53f588942dc685e745,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c9051d5b066f7bcb779d4376bca55aae,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a84073ecf7ff5762598813f1183292c7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a5e8321509805aa43a612f50ad0fca43,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60d486789ad2bc5ef15c6cb7a14013d2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:02cbd7c8e4fd5c2b7c0367570524f0cb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1c118f662cd226472a254ec237c9d5cd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:baa368a4524eac2f52e707dc8ba1bae7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9910783d0dd246264c1d79ea5062581e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f2123d64ae9714b82d25463ff06a81d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ec40248b6c5214211972a31d32d76dbc,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8998233dc979f5dfb7de4b5443fda09a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:95a1acbec231282992ee26a5d834e9fb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:baa368a4524eac2f52e707dc8ba1bae7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ec40248b6c5214211972a31d32d76dbc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9517e0185d22e097dde35b60b66968e7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:981ab3235c1275963332f9fda6f05f35,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a5e8321509805aa43a612f50ad0fca43,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a8d6aa47c9c260bbac6e3ae948acd152,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c9051d5b066f7bcb779d4376bca55aae,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47986f889ba8b262bd66735849566169,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7a42a01dbff36d53f588942dc685e745,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c888ca7cf01a4e84a007903ac76291ed,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bf79c0dd90eedfbdadd9fb7a9dd861e2,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Annotation Activity for nmdc_mta0jh65 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7070,14 +7814,16 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208356 INFO:root:found 1 records INFO:root:record: nmdc:17b505f7781a3f0e932e8f39f4190068, Metatranscriptome Activity for nmdc_mta0jh65 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Metatranscriptome Activity for nmdc_mta0jh65 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3e60d7f6f311146cfe63ac04c9984945,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5105d727c876576da54e4acb0a7715cc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3e60d7f6f311146cfe63ac04c9984945,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:17b505f7781a3f0e932e8f39f4190068, Metatranscriptome Activity for nmdc_mta0jh65 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-4txztd65 INFO:root:legacy_id: gold:Gp0208351 -ERROR:root:No has_output for nmdc:omprc-12-4txztd65 +WARNING:root:No has_output for nmdc:omprc-12-4txztd65 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:b7c1000167a12fe4ee0767139a6db282 for nmdc:omprc-12-4txztd65 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208351 INFO:root:found 1 records INFO:root:record: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Read QC Activity for nmdc_mta0tg76 @@ -7101,28 +7847,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208351 INFO:root:found 1 records INFO:root:record: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Annotation Activity for nmdc_mta0tg76 ERROR:root:OmicsMissingHasOutput: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Annotation Activity for nmdc_mta0tg76 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f979b86f10bc9eb5f073c0e72a8841f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2384185a82ec0a0e1395562eeb3b3f0b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a8554353a8d57e53dfa753d2fa6bf0c3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0e76af51c0f224f2f5e81542adf298dd,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f5736b817b43014f5544f9531e53424,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7b5a300e6054743c58b22082caa1832e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f21aabf8df4954013bc574b2e269bcc8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4edd4cf498fcaf7de58f33f21df77ff0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a4c8033e704d42999df48b5395ea401,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1120d8feb888587f8b69ba57c9b0443e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f4fed77a7455a09176453d174074cd55,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f979b86f10bc9eb5f073c0e72a8841f,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5df6844935430d22f3d900decfe525e9,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d985123a58e6659ffd6500cea7e240a8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:10dd88b31b55c17648c56f255a476fb5,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9ef96780d2d7dbeee2e003e42c4d031e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:af985bd51815d58c7fad1ac30fa5e16a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:10dd88b31b55c17648c56f255a476fb5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d985123a58e6659ffd6500cea7e240a8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4edd4cf498fcaf7de58f33f21df77ff0,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8c4cb9a4d0c7d5a085add7f8a84f5672,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f4fed77a7455a09176453d174074cd55,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bc760b0e7ee49e926eb640967bdacb85,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92955f82270fb4e70d1d732c642f2963,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:89d4a23e80923af58c4d5db7cf37da77,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:39005f30e08c4dda38573de0fc87e910,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:af985bd51815d58c7fad1ac30fa5e16a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92955f82270fb4e70d1d732c642f2963,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a8554353a8d57e53dfa753d2fa6bf0c3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a4c8033e704d42999df48b5395ea401,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bc760b0e7ee49e926eb640967bdacb85,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f21aabf8df4954013bc574b2e269bcc8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2cdb9f6bd75fe3ab3949109b53d67d70,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2384185a82ec0a0e1395562eeb3b3f0b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0e76af51c0f224f2f5e81542adf298dd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1120d8feb888587f8b69ba57c9b0443e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7b5a300e6054743c58b22082caa1832e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:89d4a23e80923af58c4d5db7cf37da77,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Annotation Activity for nmdc_mta0tg76 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7139,13 +7885,15 @@ ERROR:root:OmicsMissingHasOutput: nmdc:2fd3f7547323a9045aff6fb57a2f09d1, Metatra ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-abs03828 INFO:root:legacy_id: gold:Gp0208358 -ERROR:root:No has_output for nmdc:omprc-12-abs03828 +WARNING:root:No has_output for nmdc:omprc-12-abs03828 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:b3b2d6ed2922f5e5c0bf4acb7da8735c for nmdc:omprc-12-abs03828 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208358 INFO:root:found 1 records INFO:root:record: nmdc:84b1d252ae043684f6ea4d1444bffd64, Read QC Activity for nmdc_mta07p39 ERROR:root:OmicsMissingHasOutput: nmdc:84b1d252ae043684f6ea4d1444bffd64, Read QC Activity for nmdc_mta07p39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:16ec788c5ee44e2dbb599ebd62398e19,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b1cf14ac9ba3744e6e46f1b0e88a8769,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:16ec788c5ee44e2dbb599ebd62398e19,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:84b1d252ae043684f6ea4d1444bffd64, Read QC Activity for nmdc_mta07p39 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7163,28 +7911,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208358 INFO:root:found 1 records INFO:root:record: nmdc:84b1d252ae043684f6ea4d1444bffd64, Annotation Activity for nmdc_mta07p39 ERROR:root:OmicsMissingHasOutput: nmdc:84b1d252ae043684f6ea4d1444bffd64, Annotation Activity for nmdc_mta07p39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:56198e1331e2aa4abbf7111ec8932d24,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be055580c00c0f56fbb4616562322188,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:23d1f31eaec7a258b1bbf7603a6d0999,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a660bd4e94f2d63bf97db55683d0179c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7330adf38677d7208e6781f86de643dd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b5ee5646b7719c841c47717b524cbb90,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:56198e1331e2aa4abbf7111ec8932d24,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:20d0f922d2e4e998fe270a600eb9c2fd,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c9888622d072f56901b973d6c4cc7743,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d2215e5967a2d030136aa0d1f0827ada,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a660bd4e94f2d63bf97db55683d0179c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:23d1f31eaec7a258b1bbf7603a6d0999,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fcd3ce4ca8c2e36c6083d268cb7df754,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7381be5d87d0d890a83c58344dac40de,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:81724680f3db0d43d84bbf51398970d3,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eede1ec8adbd1073aa544811b1384e60,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3fe94ef439385d469f80b3c577e052d2,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d526aa31b4a178ee71b458ad9150e1d6,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7d58f93ea531e5af2987158f4143e15e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60363d0145de148444a3b1d6b3ff6b77,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c017a4c845d0a76b5250acbce5325d43,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:582ff73afaabe43cea8c166be399ee04,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60363d0145de148444a3b1d6b3ff6b77,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:81724680f3db0d43d84bbf51398970d3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eede1ec8adbd1073aa544811b1384e60,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0918dcb1de867fc32ded105a3bb7c578,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3fe94ef439385d469f80b3c577e052d2,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:686cc16e9ad9b26e396a607c5340897f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d2215e5967a2d030136aa0d1f0827ada,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7381be5d87d0d890a83c58344dac40de,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4ee10396bbcb30c2465209a0fb88c716,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:20d0f922d2e4e998fe270a600eb9c2fd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0918dcb1de867fc32ded105a3bb7c578,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c017a4c845d0a76b5250acbce5325d43,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be055580c00c0f56fbb4616562322188,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b5ee5646b7719c841c47717b524cbb90,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:84b1d252ae043684f6ea4d1444bffd64, Annotation Activity for nmdc_mta07p39 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7194,14 +7942,16 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208358 INFO:root:found 1 records INFO:root:record: nmdc:84b1d252ae043684f6ea4d1444bffd64, Metatranscriptome Activity for nmdc_mta07p39 ERROR:root:OmicsMissingHasOutput: nmdc:84b1d252ae043684f6ea4d1444bffd64, Metatranscriptome Activity for nmdc_mta07p39 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0c082dd82f40921305f79a20b9ae388d,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5bd340364bcce8c4a84e2124bef8c2a8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0c082dd82f40921305f79a20b9ae388d,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:84b1d252ae043684f6ea4d1444bffd64, Metatranscriptome Activity for nmdc_mta07p39 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-f5rg9460 INFO:root:legacy_id: gold:Gp0208348 -ERROR:root:No has_output for nmdc:omprc-12-f5rg9460 +WARNING:root:No has_output for nmdc:omprc-12-f5rg9460 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:ee1c76ba468d3ffa7b51cfa5e1f3939b for nmdc:omprc-12-f5rg9460 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208348 INFO:root:found 1 records INFO:root:record: nmdc:1fc013a66057310a031047fbe9562c25, Read QC Activity for nmdc_mta06w20 @@ -7225,28 +7975,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208348 INFO:root:found 1 records INFO:root:record: nmdc:1fc013a66057310a031047fbe9562c25, Annotation Activity for nmdc_mta06w20 ERROR:root:OmicsMissingHasOutput: nmdc:1fc013a66057310a031047fbe9562c25, Annotation Activity for nmdc_mta06w20 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6cd6cb082c5452dda420c9422e5d709c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:afcfb360806a009358b7f55774986f0f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:01ff3293d1c9b75087edf649aa3b17d8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eb7a2813dcd334e5ea3c0d00d72431eb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:55cb2e11da61e5638c7a1ae58bfce3cd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2e65c691e5b4b89d77874b684a88cfca,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:006dcc8dcf4954f444af53310de48d7b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e70268b719eb21b9b5d9bd2a528cc38e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:56c98cbfe22f509b78a6076e82618ffe,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:58007f51e48c5bb958ae40817b15a26d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:43c38d63f48dd2a20c14b916ad739d46,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7e44aea77a346701a78a2c9b3677c5c7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:45ebfa4752a9d9f082387b729001f143,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:01ff3293d1c9b75087edf649aa3b17d8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:afcfb360806a009358b7f55774986f0f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db434f24ac6accfb6012bdba270c6b07,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:664f0291877f2ed53acaf7a5c1b95073,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ce37745e385ec76aad48cdaa0a778a11,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6b0dd988a704954d93dbd21897a5632b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6e6eeacd5169389228692d7fb917bf70,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7e44aea77a346701a78a2c9b3677c5c7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:43c38d63f48dd2a20c14b916ad739d46,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1cc3f419a15688e04992d39974b3eae7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:972f3a3d307248495873c4d5845dccd9,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6cd6cb082c5452dda420c9422e5d709c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:eb7a2813dcd334e5ea3c0d00d72431eb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3f4c27bbdb0a4512b9c4ddb1a523673f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:56c98cbfe22f509b78a6076e82618ffe,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:000333b6ae88eef40076b492ea610e16,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:664f0291877f2ed53acaf7a5c1b95073,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:55cb2e11da61e5638c7a1ae58bfce3cd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2e65c691e5b4b89d77874b684a88cfca,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:006dcc8dcf4954f444af53310de48d7b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db434f24ac6accfb6012bdba270c6b07,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:58007f51e48c5bb958ae40817b15a26d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e70268b719eb21b9b5d9bd2a528cc38e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ce37745e385ec76aad48cdaa0a778a11,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:972f3a3d307248495873c4d5845dccd9,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:1fc013a66057310a031047fbe9562c25, Annotation Activity for nmdc_mta06w20 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7256,20 +8006,22 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208348 INFO:root:found 1 records INFO:root:record: nmdc:1fc013a66057310a031047fbe9562c25, Metatranscriptome Activity for nmdc_mta06w20 ERROR:root:OmicsMissingHasOutput: nmdc:1fc013a66057310a031047fbe9562c25, Metatranscriptome Activity for nmdc_mta06w20 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:baba5fd4590234686adb0d8e2d308300,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f7a0be4f1aed3c30f74974c7fe616f88,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:baba5fd4590234686adb0d8e2d308300,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:1fc013a66057310a031047fbe9562c25, Metatranscriptome Activity for nmdc_mta06w20 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-1qfqvn36 INFO:root:legacy_id: gold:Gp0208344 -ERROR:root:No has_output for nmdc:omprc-12-1qfqvn36 +WARNING:root:No has_output for nmdc:omprc-12-1qfqvn36 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:dcf41017f74572bdb3f61dc83680d029 for nmdc:omprc-12-1qfqvn36 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208344 INFO:root:found 1 records INFO:root:record: nmdc:b502fd974951d11591564592ecff731c, Read QC Activity for nmdc_mta0a108 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Read QC Activity for nmdc_mta0a108 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b73481e8aba62094592e9d7fc48da3ad,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:54a98ed338b3e255e6afd32f69ecd16a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b73481e8aba62094592e9d7fc48da3ad,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Read QC Activity for nmdc_mta0a108 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7287,28 +8039,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208344 INFO:root:found 1 records INFO:root:record: nmdc:b502fd974951d11591564592ecff731c, Annotation Activity for nmdc_mta0a108 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Annotation Activity for nmdc_mta0a108 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1a661b020131f8b739d506277086cad8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:87d56a1b84322be97b89bd0a5207eb1a,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8109a57f97545b5484ad1fd48bb47863,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:450ec3078029f2d3eb75d030f1cdc1b0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8732f93ddaa09a15bc348d2ebeeaca0c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9468016ba6fec5600040a0f9d0164e68,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc29560aaee165288f66b512092b69c7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c12add67618aa05d97e702751a069ce1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b138fb15e228475c5d3319c2c361b065,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92ce84bfeb2607a115ac66753be99057,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bb286ec7502335c39470ce01e9ca4652,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6f39de88b14d1bb7e448370570b226ad,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6810e6cf7c5071c17896b3ebe41a68e0,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:77643280bd103f51c1ebdc7a0edb50f4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc29560aaee165288f66b512092b69c7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d78122fa68080462c2e9c6c6a1bff1dc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92ce84bfeb2607a115ac66753be99057,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:877f0e6e7c58579c1b47022f52a758ac,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c3578669b4717587efec60cf0e7b344b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5ec87e5be3264eb3fe68c031f36b4282,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8b0092c6ddc61d2e10f68283f3b1245c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:32e6e514ccfd34bb82de48691b694632,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:87d56a1b84322be97b89bd0a5207eb1a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:877f0e6e7c58579c1b47022f52a758ac,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6810e6cf7c5071c17896b3ebe41a68e0,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c36797782b4e74c72cdf7346c672f171,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c12add67618aa05d97e702751a069ce1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1a661b020131f8b739d506277086cad8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:32e6e514ccfd34bb82de48691b694632,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:450ec3078029f2d3eb75d030f1cdc1b0,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8b0092c6ddc61d2e10f68283f3b1245c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bd1d415e2f936bbda4c717e63a3b7fb1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b138fb15e228475c5d3319c2c361b065,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6f39de88b14d1bb7e448370570b226ad,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9468016ba6fec5600040a0f9d0164e68,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bb286ec7502335c39470ce01e9ca4652,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8732f93ddaa09a15bc348d2ebeeaca0c,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Annotation Activity for nmdc_mta0a108 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7325,7 +8077,9 @@ ERROR:root:OmicsMissingHasOutput: nmdc:b502fd974951d11591564592ecff731c, Metatra ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-9xha7j45 INFO:root:legacy_id: gold:Gp0208350 -ERROR:root:No has_output for nmdc:omprc-12-9xha7j45 +WARNING:root:No has_output for nmdc:omprc-12-9xha7j45 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:807cf9a4ba9ec911dac3952ef9c63ef2 for nmdc:omprc-12-9xha7j45 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208350 INFO:root:found 1 records INFO:root:record: nmdc:a7f1f19facde372fe54b289878c56550, Read QC Activity for nmdc_mta00v17 @@ -7349,28 +8103,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208350 INFO:root:found 1 records INFO:root:record: nmdc:a7f1f19facde372fe54b289878c56550, Annotation Activity for nmdc_mta00v17 ERROR:root:OmicsMissingHasOutput: nmdc:a7f1f19facde372fe54b289878c56550, Annotation Activity for nmdc_mta00v17 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ad759b77314547d01a54e50707863b62,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b3dac98a76c552807a1283bf87b6be14,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d00cc6701024c10bafc2138585a90f8f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7aec334ef25d393eb0654490ba2e1376,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1773f212b230e55fba6872ce88711610,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:27fdb94a091af4e0a779ede838a0af2d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4c63705dfc706b1ec98fb81cbfbb0362,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b4225bb6b268d9588a30ba58b8d4f837,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ad759b77314547d01a54e50707863b62,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6d891081dfae65e17e6ea0da81beb967,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0c51b17f4cf7ddda910dc4b2d62d7f9a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a582302c43414747470b72fe4928437f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c59e9a6d416a8d78934ae9c5e0704a43,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1387925373a9b8daa722d5f19869b534,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1b2d9699b4f5576c4cddbac87b3e1a53,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f43cdcf3d586dcb604a3cebe69781869,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0a2157ec497c2b6af0921542a9e92401,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a5f0a949533484094c1abc268ea57b61,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1b2d9699b4f5576c4cddbac87b3e1a53,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d00cc6701024c10bafc2138585a90f8f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ba94010c37952ba5f32630732d183cb0,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b3dac98a76c552807a1283bf87b6be14,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cd93b88b6639c271cf1c3d02589a963b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7283988ab002e99694de4b2e8b738135,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e269c377e141f241b4967b79760aaee5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6d891081dfae65e17e6ea0da81beb967,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:92805ff62fe4236802b36a32c7d6b5e0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b4225bb6b268d9588a30ba58b8d4f837,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a582302c43414747470b72fe4928437f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7aec334ef25d393eb0654490ba2e1376,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7283988ab002e99694de4b2e8b738135,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ba94010c37952ba5f32630732d183cb0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:27fdb94a091af4e0a779ede838a0af2d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c59e9a6d416a8d78934ae9c5e0704a43,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f43cdcf3d586dcb604a3cebe69781869,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0c51b17f4cf7ddda910dc4b2d62d7f9a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4c63705dfc706b1ec98fb81cbfbb0362,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:a7f1f19facde372fe54b289878c56550, Annotation Activity for nmdc_mta00v17 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7387,13 +8141,15 @@ ERROR:root:OmicsMissingHasOutput: nmdc:a7f1f19facde372fe54b289878c56550, Metatra ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-v9ktn037 INFO:root:legacy_id: gold:Gp0208355 -ERROR:root:No has_output for nmdc:omprc-12-v9ktn037 +WARNING:root:No has_output for nmdc:omprc-12-v9ktn037 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:c6624b04d925d5d03bf91a6a001f7e12 for nmdc:omprc-12-v9ktn037 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208355 INFO:root:found 1 records INFO:root:record: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Read QC Activity for nmdc_mta02s25 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Read QC Activity for nmdc_mta02s25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c3649c4bad6e060e219e5851c876a821,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9912b8e301e961447fb4891feed6e36a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c3649c4bad6e060e219e5851c876a821,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Read QC Activity for nmdc_mta02s25 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7411,28 +8167,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208355 INFO:root:found 1 records INFO:root:record: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Annotation Activity for nmdc_mta02s25 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Annotation Activity for nmdc_mta02s25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc4a4aad3c2df74508519e8109bc5412,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6421568b1b1a42bb9d7b571a599485e6,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fa5cbe7623226177c2a153446c5d6e27,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d37c29ac936ba309c8d572054caea202,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:abc1f94aac8bd1a91fd6e9406ff3cd85,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fd6a6fd1e5e42c66320cbd7d67886236,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d8ac3aef66ef58ab482989d599d5d505,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ed132eefa3624a1d2f3d0d4d34cb8d41,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be46be17b2b0de3df6dd0053ce0df888,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:05268127580ee69bfb3370bba6fa5557,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6421568b1b1a42bb9d7b571a599485e6,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0068723bdafbfa6fa7487c93504dcee1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1abb7610e3036f2cc7a94d26f0ac57ec,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1103c86b39928173cf47a1386d320d35,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:80b877ce75d54416159ab93358a676e1,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72f9a3cb512be27d7a06c3eb99aa31f9,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0f25ca4d50832bbe01c6614143ef14fc,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:74ad839e06ad0b8776f2ae4a9a8bb4be,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:80b877ce75d54416159ab93358a676e1,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:be46be17b2b0de3df6dd0053ce0df888,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:99435cedb5ff09cc55ce2a395d75a052,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6eeb2557b318abf21f876d33fdd17198,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9576ba16dab930b2430535b3e49a8f6a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1abb7610e3036f2cc7a94d26f0ac57ec,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dc4a4aad3c2df74508519e8109bc5412,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:99435cedb5ff09cc55ce2a395d75a052,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3fdf19331330e4ad2a145353c4273902,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0f25ca4d50832bbe01c6614143ef14fc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ed132eefa3624a1d2f3d0d4d34cb8d41,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9576ba16dab930b2430535b3e49a8f6a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d37c29ac936ba309c8d572054caea202,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:21513c95a8650b3f6596eedc52229135,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:05268127580ee69bfb3370bba6fa5557,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1103c86b39928173cf47a1386d320d35,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:abc1f94aac8bd1a91fd6e9406ff3cd85,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fa5cbe7623226177c2a153446c5d6e27,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d8ac3aef66ef58ab482989d599d5d505,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Annotation Activity for nmdc_mta02s25 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7442,20 +8198,22 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208355 INFO:root:found 1 records INFO:root:record: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Metatranscriptome Activity for nmdc_mta02s25 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Metatranscriptome Activity for nmdc_mta02s25 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6b897fc0d5b9943eade9d7127a900003,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f4097e6151ca47864b5b6c212684385a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6b897fc0d5b9943eade9d7127a900003,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:683c4a7adaae08cf5456f7b80bb6f4d3, Metatranscriptome Activity for nmdc_mta02s25 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-4vxgfj26 INFO:root:legacy_id: gold:Gp0208349 -ERROR:root:No has_output for nmdc:omprc-12-4vxgfj26 +WARNING:root:No has_output for nmdc:omprc-12-4vxgfj26 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:ad10a5361539089a3381aa196fb89744 for nmdc:omprc-12-4vxgfj26 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208349 INFO:root:found 1 records INFO:root:record: nmdc:944e7a4a1a3070061bac6414ec994622, Read QC Activity for nmdc_mta0dy21 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Read QC Activity for nmdc_mta0dy21 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f3a799736781817fea1968f1bd1bb71e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e940c7b6d4c84cca17475992526dcfcb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f3a799736781817fea1968f1bd1bb71e,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Read QC Activity for nmdc_mta0dy21 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7473,28 +8231,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208349 INFO:root:found 1 records INFO:root:record: nmdc:944e7a4a1a3070061bac6414ec994622, Annotation Activity for nmdc_mta0dy21 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Annotation Activity for nmdc_mta0dy21 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f871db69d3dc259230c03ab8bece4ee0,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8af439ec05648a5f60477a877a1c144e,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:58033b7adf76087bce2b7ca8a8111c76,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7f7b1e63df1742356dc0566b67ae8547,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4dacbdd8208c98cfe87c581196782a08,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8e0cd148df80eeb2b2c466f89ba513f5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:61a8c2af85f38bd4dabcefbbaef64469,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:87703451501d0882cdf1a44898d33a45,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dad47e1ea9b255d4c418ade3b5d94f44,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c2909fdab8e2213d71298020af35ab64,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c35c64edbe593b3a9c99caab119d9dcb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c846c05ddde0bd9dc7bf2d555e3ca74c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ebf5defe9de2e4e134f46e271698d0e2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:58033b7adf76087bce2b7ca8a8111c76,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f4b738caea41366e79c3c27bfec1d6a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:53f136cb338a37ba8d5c30cf5c86374a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:46aa02710cb6a87d5be6de7dd55eed3e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4970daf3007715cd16da7cdcff46ccb6,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c35c64edbe593b3a9c99caab119d9dcb,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:61a8c2af85f38bd4dabcefbbaef64469,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8e0cd148df80eeb2b2c466f89ba513f5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4dacbdd8208c98cfe87c581196782a08,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:09a0856b1629aea54ce8576bbbd5f430,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f6713ede604e0acf1b8fe5397d99d68,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c2909fdab8e2213d71298020af35ab64,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:dad47e1ea9b255d4c418ade3b5d94f44,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:339a7cdba869d38093778b164efc8330,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c846c05ddde0bd9dc7bf2d555e3ca74c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7f7b1e63df1742356dc0566b67ae8547,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:46aa02710cb6a87d5be6de7dd55eed3e,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a7c5f384baa013b730d2e6093ff88a8f,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:87703451501d0882cdf1a44898d33a45,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:09a0856b1629aea54ce8576bbbd5f430,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f871db69d3dc259230c03ab8bece4ee0,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d89ee02cca8dcd4191ffaa14289426a1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:53f136cb338a37ba8d5c30cf5c86374a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8af439ec05648a5f60477a877a1c144e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f6713ede604e0acf1b8fe5397d99d68,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Annotation Activity for nmdc_mta0dy21 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7504,20 +8262,22 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208349 INFO:root:found 1 records INFO:root:record: nmdc:944e7a4a1a3070061bac6414ec994622, Metatranscriptome Activity for nmdc_mta0dy21 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Metatranscriptome Activity for nmdc_mta0dy21 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ed49dcdb96b092ac587b6c6cdcfc3f3a,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:81a5cd1cc91a6dbcb5976d72b8cf9eca,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ed49dcdb96b092ac587b6c6cdcfc3f3a,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:944e7a4a1a3070061bac6414ec994622, Metatranscriptome Activity for nmdc_mta0dy21 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-ht3q6r79 INFO:root:legacy_id: gold:Gp0208357 -ERROR:root:No has_output for nmdc:omprc-12-ht3q6r79 +WARNING:root:No has_output for nmdc:omprc-12-ht3q6r79 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:38c3efee7e89f8a0a298226246b956c3 for nmdc:omprc-12-ht3q6r79 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208357 INFO:root:found 1 records INFO:root:record: nmdc:98cff95ffc921c0c51deec0308e33f2b, Read QC Activity for nmdc_mta0dx24 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Read QC Activity for nmdc_mta0dx24 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ef5f9738c3612c740e2fbf391044aa5b,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3628a9a93ecf059328ec403634155cce,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ef5f9738c3612c740e2fbf391044aa5b,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Read QC Activity for nmdc_mta0dx24 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7536,27 +8296,27 @@ INFO:root:found 1 records INFO:root:record: nmdc:98cff95ffc921c0c51deec0308e33f2b, Annotation Activity for nmdc_mta0dx24 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Annotation Activity for nmdc_mta0dx24 failing ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b308f5348144a9f630f2ce44288591b8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:874ae537d53586605c16eb50c3a229fc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0e2eedef8c3b65f5a85b1e63ac09d3d7,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:809065700dde302d6a61064d10b2b2cc,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:82a55e2a9ff718fe6b6655e309762f5d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f20279ab74d85c580dd9b21e274bd535,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f2b5a14ab6c0f2dc446fe168a4229468,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:982d63cf85b91ea6cb733ee02fc4d6e8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2ac7b52005d8bb30fe3e9ea62fa809ab,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2751241569d0de50eab4a3948e5af105,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b98b737a52de2cb08d141a62df131c3a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6bd7c1829029bf1c0f47bc85e9945f20,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d76e1f1e19fd450954b7049622557e61,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2ca78f6fa326d5623197f6fcc81a3553,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d03a320a1812d223d98d09aa9513b062,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0e2eedef8c3b65f5a85b1e63ac09d3d7,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:505ee159e089b9fe7e089ea092329674,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6bd7c1829029bf1c0f47bc85e9945f20,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bd08b514b3dfdffd5b5e0be6abb40d3b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2ca78f6fa326d5623197f6fcc81a3553,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b98b737a52de2cb08d141a62df131c3a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1864be0cbe3f5af6e977e19d3627df54,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a867e07c653c95cfec8d29bc22bdf461,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:09db70d29938d68d04510138f4ca740c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:505ee159e089b9fe7e089ea092329674,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f20279ab74d85c580dd9b21e274bd535,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:982d63cf85b91ea6cb733ee02fc4d6e8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2ac7b52005d8bb30fe3e9ea62fa809ab,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e35232aad1fe332ce8733a12c94c6ed8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1864be0cbe3f5af6e977e19d3627df54,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:82a55e2a9ff718fe6b6655e309762f5d,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:61c9a9e8fde82fea215ff3c64d258c4c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2751241569d0de50eab4a3948e5af105,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f2b5a14ab6c0f2dc446fe168a4229468,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:874ae537d53586605c16eb50c3a229fc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:09db70d29938d68d04510138f4ca740c,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Annotation Activity for nmdc_mta0dx24 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7566,20 +8326,22 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208357 INFO:root:found 1 records INFO:root:record: nmdc:98cff95ffc921c0c51deec0308e33f2b, Metatranscriptome Activity for nmdc_mta0dx24 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Metatranscriptome Activity for nmdc_mta0dx24 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da0f01b93960fdae5ff3b00888d8e97c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:50235d983570fcab579e3525f19943d7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:da0f01b93960fdae5ff3b00888d8e97c,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:98cff95ffc921c0c51deec0308e33f2b, Metatranscriptome Activity for nmdc_mta0dx24 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-46j0gx42 INFO:root:legacy_id: gold:Gp0208345 -ERROR:root:No has_output for nmdc:omprc-12-46j0gx42 +WARNING:root:No has_output for nmdc:omprc-12-46j0gx42 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:90716c876b71ca3983495113acf67955 for nmdc:omprc-12-46j0gx42 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208345 INFO:root:found 1 records INFO:root:record: nmdc:3b4ae5bffe83e6a104c95360d63954de, Read QC Activity for nmdc_mta00292 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Read QC Activity for nmdc_mta00292 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72af5ce2a69b702d8f2d37596aa13a80,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:566cc849f80d611c0a00d63a1908af88,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:72af5ce2a69b702d8f2d37596aa13a80,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Read QC Activity for nmdc_mta00292 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7597,28 +8359,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208345 INFO:root:found 1 records INFO:root:record: nmdc:3b4ae5bffe83e6a104c95360d63954de, Annotation Activity for nmdc_mta00292 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Annotation Activity for nmdc_mta00292 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c35191da64a8a1148d71ffbaa9ec76e4,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a8864986d0abd4c794dd37b276473b6,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7fd9d2f82257a449918fc56dca6af85b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0094dffbc1c866a1346429c022c1dfe8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:18ee2af4843dffed59d3acb8501086ed,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e3f5b1f2a60e99e175c3aa1b447fbfeb,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8a4e682e5df809689438bb53e6653408,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:99d2a81cfbb0c533a153e01d3349c3ce,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:906abffa3f36f9041f062630da68d950,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f1250b9e4a1a0e530df60fc1324d9a0c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ab14d09a2602e6981ef4ebf38b416d09,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5aeafb9cf74433b8b52b92f0e0c46019,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b9f63f0fe88f8126b5d0a8a93cfa6c3b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60bbe7e02fdf6862998e290345646e8b,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e3f5b1f2a60e99e175c3aa1b447fbfeb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:599a5759a8ea6ea89b2f1c851462c298,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:387fd13d8e18d5205d497e194ab162f2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4180c457c5c0208100316954929b2d9c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0094dffbc1c866a1346429c022c1dfe8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6170bcd8958c6bd5febeb27e69547fea,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:599a5759a8ea6ea89b2f1c851462c298,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:60bbe7e02fdf6862998e290345646e8b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:522640d449c649ace7ed55d3354a6285,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f1250b9e4a1a0e530df60fc1324d9a0c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7336e18ce9f6e4569688eaed17e51d83,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ab14d09a2602e6981ef4ebf38b416d09,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:18ee2af4843dffed59d3acb8501086ed,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:47eb84b27a56061749fea5d243eb4894,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c35191da64a8a1148d71ffbaa9ec76e4,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:20354d29f50c6561a838bdfbdcf1c575,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5aeafb9cf74433b8b52b92f0e0c46019,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:522640d449c649ace7ed55d3354a6285,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:906abffa3f36f9041f062630da68d950,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:99d2a81cfbb0c533a153e01d3349c3ce,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4180c457c5c0208100316954929b2d9c,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Annotation Activity for nmdc_mta00292 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7635,13 +8397,15 @@ ERROR:root:OmicsMissingHasOutput: nmdc:3b4ae5bffe83e6a104c95360d63954de, Metatra ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 INFO:root:omics_processing_record: nmdc:omprc-12-1p19kp03 INFO:root:legacy_id: gold:Gp0208347 -ERROR:root:No has_output for nmdc:omprc-12-1p19kp03 +WARNING:root:No has_output for nmdc:omprc-12-1p19kp03 searching for has_input from ReadQC +INFO:root:has_input_data_objects: 1 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:5ce5ad5801adcb384ab791b300e8ba43 for nmdc:omprc-12-1p19kp03 INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0208347 INFO:root:found 1 records INFO:root:record: nmdc:6305a511f040e8bef679b8a2e439329e, Read QC Activity for nmdc_mta0r607 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Read QC Activity for nmdc_mta0r607 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5123936595d93e72ec86173f29f0f096,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4071f33f286e6e5c09971b4da88fb7d6,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5123936595d93e72ec86173f29f0f096,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Read QC Activity for nmdc_mta0r607 ERROR:root:FailedRecords: read_qc_analysis_activity_set, 2 @@ -7659,28 +8423,28 @@ INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0208347 INFO:root:found 1 records INFO:root:record: nmdc:6305a511f040e8bef679b8a2e439329e, Annotation Activity for nmdc_mta0r607 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Annotation Activity for nmdc_mta0r607 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:716130c5f415e520c9c64a556902248b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ebb96410a8e20a0081842632639108a2,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1ecb1e1d685b42559e9e3fe9cddf27b2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a01b5b6cbc4437359277bad32c67d206,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:845c84d682755143aa374ac6ba80901c,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cb4d55ac9d2f2ad992a8b8e6c1bc6044,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c911a02e0f09e31ab3d48be55e360fc8,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1a5414d0d898710f6d4f50db6fdd84da,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:716130c5f415e520c9c64a556902248b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a141bd880d53a9531b2a203321d85860,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:681dcaa3dbf4762f17843cb16079772a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8727686177aaefac48281df10d8ea9fd,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9fc12b5283901dcdad532e3ec7d693c5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2d1ec86ef28d3340f3f6aab3b1f9f97d,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f8ccb9d5c170ba3bfe16ab1363cba31,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a01b5b6cbc4437359277bad32c67d206,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d0b3804e2acabdef04ceef794205a20d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cb4d55ac9d2f2ad992a8b8e6c1bc6044,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:626ebca383501deebf357cd74168bf55,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:845c84d682755143aa374ac6ba80901c,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3310c2597f0b1a8e1005ba1f8bba06da,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8727686177aaefac48281df10d8ea9fd,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6df88fc5897009b09d4fa774ad7a2879,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:524ded0fcc5e97934d7037ac5b757351,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:11f79bd87213158e47756ba99bcebf6d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c911a02e0f09e31ab3d48be55e360fc8,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d0b3804e2acabdef04ceef794205a20d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2d1ec86ef28d3340f3f6aab3b1f9f97d,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d830add00f1e7822a748f81e99edbc30,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3a1e67eb420e6a818fe803fca6d29dba,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:524ded0fcc5e97934d7037ac5b757351,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:681dcaa3dbf4762f17843cb16079772a,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ebb96410a8e20a0081842632639108a2,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:626ebca383501deebf357cd74168bf55,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9fc12b5283901dcdad532e3ec7d693c5,, -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a141bd880d53a9531b2a203321d85860,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d830add00f1e7822a748f81e99edbc30,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6df88fc5897009b09d4fa774ad7a2879,, ERROR:root:failing_data_objects: 22 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Annotation Activity for nmdc_mta0r607 ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 @@ -7690,13 +8454,13 @@ INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0208347 INFO:root:found 1 records INFO:root:record: nmdc:6305a511f040e8bef679b8a2e439329e, Metatranscriptome Activity for nmdc_mta0r607 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Metatranscriptome Activity for nmdc_mta0r607 failing -ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1b0a42540b22fac68bd801cc0e2615e1,, ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c46d12ccd3b0fc0c08e1182c56223c92,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1b0a42540b22fac68bd801cc0e2615e1,, ERROR:root:failing_data_objects: 2 ERROR:root:OmicsMissingHasOutput: nmdc:6305a511f040e8bef679b8a2e439329e, Metatranscriptome Activity for nmdc_mta0r607 ERROR:root:FailedRecords: metatranscriptome_activity_set, 2 -INFO:root:Writing 90 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json -INFO:root:Elapsed time: 547.1215517520905 +INFO:root:Writing 107 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json +INFO:root:Elapsed time: 525.423449754715 INFO:root:Writing 33 failed records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_failed_record_dump.json INFO:root:Found 16 omics processing records with missing has_output INFO:root:Found 0 read qc records with missing data objects diff --git a/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_process_records.log b/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_process_records.log index 95f068b5..24da6f5c 100644 --- a/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_process_records.log +++ b/nmdc_automation/re_iding/scripts/nmdc:sty-11-33fbta56_process_records.log @@ -3,8556 +3,9403 @@ INFO:root:Processing workflow records for study_id: nmdc:sty-11-33fbta56 INFO:root:Using data_dir: /global/cfs/cdirs/m3408/results INFO:root:Using db_infile: /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_associated_record_dump.json -INFO:root:Read 90 records from db_infile +INFO:root:Read 107 records from db_infile INFO:root:omics_processing_id: nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d16af5ca7671f7dc42de14deb8b0dd5 nmdc:dobj-11-e1r30x14 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d16af5ca7671f7dc42de14deb8b0dd5 nmdc:dobj-11-cwq6c530 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-av2pt607 -INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3tma8377.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-3tma8377.1 +INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gxr6pa85.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-gxr6pa85.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bcffdf80842f9fcb2c9c62c35ad28c6 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-3tma8377.1/nmdc_wfrqc-11-3tma8377.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bcffdf80842f9fcb2c9c62c35ad28c6 nmdc:dobj-11-h6xq3y76 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-gxr6pa85.1/nmdc_wfrqc-11-gxr6pa85.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bcffdf80842f9fcb2c9c62c35ad28c6 nmdc:dobj-11-e1kaqq09 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3tma8377.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gxr6pa85.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56ba958be56af80bb4fc27f4635edaa5 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-3tma8377.1/nmdc_wfrqc-11-3tma8377.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56ba958be56af80bb4fc27f4635edaa5 nmdc:dobj-11-4ppr9b09 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrqc-11-gxr6pa85.1/nmdc_wfrqc-11-gxr6pa85.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56ba958be56af80bb4fc27f4635edaa5 nmdc:dobj-11-ka333d60 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3tma8377.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfrqc-11-3tma8377.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gxr6pa85.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfrqc-11-gxr6pa85.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-av2pt607 -INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-mfdsyh71.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-mfdsyh71.1 +INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-m7cs3g40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-mfdsyh71.1/nmdc_wfmgas-11-mfdsyh71.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de nmdc:dobj-11-btq16r31 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ea1e1eab9d34bfb48cf83dccb8e95de nmdc:dobj-11-ne8had46 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mfdsyh71.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:582604e1df5f4337462b29ce34f2c02e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-mfdsyh71.1/nmdc_wfmgas-11-mfdsyh71.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:582604e1df5f4337462b29ce34f2c02e nmdc:dobj-11-haybe454 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:582604e1df5f4337462b29ce34f2c02e nmdc:dobj-11-63tk3b25 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mfdsyh71.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:623f8105bab94519da3d5a620b8bf6da -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-mfdsyh71.1/nmdc_wfmgas-11-mfdsyh71.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:623f8105bab94519da3d5a620b8bf6da nmdc:dobj-11-0ygf7v52 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:623f8105bab94519da3d5a620b8bf6da nmdc:dobj-11-k811wb52 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mfdsyh71.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3393ec1177ba82d1b16364a757a19173 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-mfdsyh71.1/nmdc_wfmgas-11-mfdsyh71.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3393ec1177ba82d1b16364a757a19173 nmdc:dobj-11-zpgkxp62 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3393ec1177ba82d1b16364a757a19173 nmdc:dobj-11-ttfd9c15 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mfdsyh71.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:19023d87b3cdd9de7b40dbfc23e38c89 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-mfdsyh71.1/nmdc_wfmgas-11-mfdsyh71.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19023d87b3cdd9de7b40dbfc23e38c89 nmdc:dobj-11-f69kzb08 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfmgas-11-m7cs3g40.1/nmdc_wfmgas-11-m7cs3g40.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19023d87b3cdd9de7b40dbfc23e38c89 nmdc:dobj-11-rktt8107 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mfdsyh71.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfmgas-11-mfdsyh71.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m7cs3g40.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfmgas-11-m7cs3g40.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-av2pt607 -INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-sy818y90.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1 +INFO:root:New activity id created for nmdc:omprc-11-av2pt607 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-v6s5t524.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dce7c900d1ab453a1d95bd3979c7a017 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dce7c900d1ab453a1d95bd3979c7a017 nmdc:dobj-11-8hadds55 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dce7c900d1ab453a1d95bd3979c7a017 nmdc:dobj-11-mkhm5954 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 nmdc:dobj-11-ew5qrs51 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78f35ca49a6bedf472f7dd61ae7a49d3 nmdc:dobj-11-yaz6rz52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5468325ed4b6b62bb116ff5142ff33d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5468325ed4b6b62bb116ff5142ff33d nmdc:dobj-11-26j5jv04 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5468325ed4b6b62bb116ff5142ff33d nmdc:dobj-11-csasr793 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a9b94f65b6f0af2208735238ddeb02c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a9b94f65b6f0af2208735238ddeb02c nmdc:dobj-11-7q90wq74 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a9b94f65b6f0af2208735238ddeb02c nmdc:dobj-11-9cggza52 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa401a0a97e73130ebfffcb25efef945 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa401a0a97e73130ebfffcb25efef945 nmdc:dobj-11-x37hge47 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa401a0a97e73130ebfffcb25efef945 nmdc:dobj-11-md317864 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3d3f0f87d622ef5a110bb494b8c95f0 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3d3f0f87d622ef5a110bb494b8c95f0 nmdc:dobj-11-4mn18c27 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3d3f0f87d622ef5a110bb494b8c95f0 nmdc:dobj-11-rj5kfr60 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1fd51f1e8db0648782ae6d29e583d5b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1fd51f1e8db0648782ae6d29e583d5b nmdc:dobj-11-adm5g792 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1fd51f1e8db0648782ae6d29e583d5b nmdc:dobj-11-fzt58s60 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:11bee827a9abef578eb6610dc515fe04 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11bee827a9abef578eb6610dc515fe04 nmdc:dobj-11-nmzhy560 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11bee827a9abef578eb6610dc515fe04 nmdc:dobj-11-mwh66442 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:920790e781e64cd3eed3a32c521ffda7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-sy818y90.1/nmdc_wfrbt-11-sy818y90.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:920790e781e64cd3eed3a32c521ffda7 nmdc:dobj-11-j9qzr750 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-av2pt607/nmdc:wfrbt-11-v6s5t524.1/nmdc_wfrbt-11-v6s5t524.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:920790e781e64cd3eed3a32c521ffda7 nmdc:dobj-11-gaw01g24 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-av2pt607 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sy818y90.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfrbt-11-sy818y90.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v6s5t524.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b23607de481eac9d93776f1eb805e989 nmdc:wfrbt-11-v6s5t524.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-av2pt607 +INFO:root:omics_processing_id: nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a3baceee6e3dd4c4fc13567c2fd5df3 nmdc:dobj-11-t38tq129 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8nny2x31 +INFO:root:New activity id created for nmdc:omprc-11-8nny2x31 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-njvptx61.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-njvptx61.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39dfcb6a3f2afed8306b3666ec98c75b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-njvptx61.1/nmdc_wfrqc-11-njvptx61.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39dfcb6a3f2afed8306b3666ec98c75b nmdc:dobj-11-4bjd9933 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-njvptx61.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88f1d63bc4bbca5e443d53b878eea85a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfrqc-11-njvptx61.1/nmdc_wfrqc-11-njvptx61.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88f1d63bc4bbca5e443d53b878eea85a nmdc:dobj-11-9wvavv14 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-njvptx61.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a5fba8fca3b75c9e0b564a8e311adf46 nmdc:wfrqc-11-njvptx61.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-8nny2x31 +INFO:root:New activity id created for nmdc:omprc-11-8nny2x31 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qt24b694.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb0d9e427179d63f3b38a5fc2eb53c02 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb0d9e427179d63f3b38a5fc2eb53c02 nmdc:dobj-11-fse1n644 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52cc3432b1f0ac4a02c8de718c9f4b4d nmdc:dobj-11-wr2xsb86 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8b0ebe8bb1ff644e9742e2cafa09c82 nmdc:dobj-11-akkw0089 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a574224aebfebcc159a8eca738f9959 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a574224aebfebcc159a8eca738f9959 nmdc:dobj-11-4yn4s190 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:baacf8df3c4d301e397f4e2202cf68b1 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8nny2x31/nmdc:wfmgas-11-qt24b694.1/nmdc_wfmgas-11-qt24b694.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baacf8df3c4d301e397f4e2202cf68b1 nmdc:dobj-11-sbdkj990 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qt24b694.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a5fba8fca3b75c9e0b564a8e311adf46 nmdc:wfmgas-11-qt24b694.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-8nny2x31 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8nny2x31 INFO:root:omics_processing_id: nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91ab0ce1ea61b477a64e57a872624cb4 nmdc:dobj-11-9649rw03 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91ab0ce1ea61b477a64e57a872624cb4 nmdc:dobj-11-98j39q46 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-kehaxy70 -INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7r4j7313.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-7r4j7313.1 +INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-48efbr86.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-48efbr86.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86750c55b1a31ad521879421b0412a84 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-7r4j7313.1/nmdc_wfrqc-11-7r4j7313.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86750c55b1a31ad521879421b0412a84 nmdc:dobj-11-t4n09x74 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-48efbr86.1/nmdc_wfrqc-11-48efbr86.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86750c55b1a31ad521879421b0412a84 nmdc:dobj-11-qt756c82 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7r4j7313.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-48efbr86.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:83dc80cba46c2e8979928b07d7cacc52 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-7r4j7313.1/nmdc_wfrqc-11-7r4j7313.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83dc80cba46c2e8979928b07d7cacc52 nmdc:dobj-11-1mh9d284 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrqc-11-48efbr86.1/nmdc_wfrqc-11-48efbr86.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83dc80cba46c2e8979928b07d7cacc52 nmdc:dobj-11-74tn6695 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7r4j7313.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfrqc-11-7r4j7313.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-48efbr86.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfrqc-11-48efbr86.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-kehaxy70 -INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7wfseq27.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7wfseq27.1 +INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7t7cmk09.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74d5bc61e3be4595a9ad0df3bbd3797f -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7wfseq27.1/nmdc_wfmgas-11-7wfseq27.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74d5bc61e3be4595a9ad0df3bbd3797f nmdc:dobj-11-k3yxzs43 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74d5bc61e3be4595a9ad0df3bbd3797f nmdc:dobj-11-3zp2zd26 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7wfseq27.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47d64c1d12dbeb9f477a3d5136bb86c1 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7wfseq27.1/nmdc_wfmgas-11-7wfseq27.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d64c1d12dbeb9f477a3d5136bb86c1 nmdc:dobj-11-ydrkav34 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d64c1d12dbeb9f477a3d5136bb86c1 nmdc:dobj-11-5hvv9g68 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7wfseq27.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8aedb23e2b4fa5c601e57f6910396da -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7wfseq27.1/nmdc_wfmgas-11-7wfseq27.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8aedb23e2b4fa5c601e57f6910396da nmdc:dobj-11-fsw25446 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8aedb23e2b4fa5c601e57f6910396da nmdc:dobj-11-c408gp13 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7wfseq27.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53fd9f9a2c4c536c87a5019541a4fb0d -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7wfseq27.1/nmdc_wfmgas-11-7wfseq27.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53fd9f9a2c4c536c87a5019541a4fb0d nmdc:dobj-11-w33jfb59 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53fd9f9a2c4c536c87a5019541a4fb0d nmdc:dobj-11-ras9yq12 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7wfseq27.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7wfseq27.1/nmdc_wfmgas-11-7wfseq27.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 nmdc:dobj-11-h2279r45 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfmgas-11-7t7cmk09.1/nmdc_wfmgas-11-7t7cmk09.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b4d0e748013c1bf96cc983cbf9c69e6 nmdc:dobj-11-bmfzna45 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7wfseq27.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfmgas-11-7wfseq27.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7t7cmk09.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfmgas-11-7t7cmk09.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-kehaxy70 -INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qdqf1f31.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1 +INFO:root:New activity id created for nmdc:omprc-11-kehaxy70 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-72950944.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b149c1f7ee97c58fc80e9d1e846370c -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b149c1f7ee97c58fc80e9d1e846370c nmdc:dobj-11-cbjfjk27 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b149c1f7ee97c58fc80e9d1e846370c nmdc:dobj-11-c1dzx032 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:108ee81d2b63a8bfdcdffd57a2527449 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:108ee81d2b63a8bfdcdffd57a2527449 nmdc:dobj-11-mhegbk67 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:108ee81d2b63a8bfdcdffd57a2527449 nmdc:dobj-11-ppk8ch10 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:457fd17d3206e438c0923d5a476e4da6 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:457fd17d3206e438c0923d5a476e4da6 nmdc:dobj-11-7c9f3y27 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:457fd17d3206e438c0923d5a476e4da6 nmdc:dobj-11-bzcb9m70 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ac7432d14596f5a627ec1335698f2a8 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ac7432d14596f5a627ec1335698f2a8 nmdc:dobj-11-n4vres86 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ac7432d14596f5a627ec1335698f2a8 nmdc:dobj-11-ke9y6c18 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f19bb4b52cad7f784386f91e155f999a -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f19bb4b52cad7f784386f91e155f999a nmdc:dobj-11-px0g8k74 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f19bb4b52cad7f784386f91e155f999a nmdc:dobj-11-c5sn6750 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5f2240a59f252bd85b05dfea67935a0 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5f2240a59f252bd85b05dfea67935a0 nmdc:dobj-11-jy6f5s12 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5f2240a59f252bd85b05dfea67935a0 nmdc:dobj-11-p8h5an44 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9493a2d1a5bc0fa675a045672c2a0e81 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9493a2d1a5bc0fa675a045672c2a0e81 nmdc:dobj-11-knxhyj77 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9493a2d1a5bc0fa675a045672c2a0e81 nmdc:dobj-11-wxr21a08 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d6e2df5e68ee64e0b238c9933b63ab6f -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6e2df5e68ee64e0b238c9933b63ab6f nmdc:dobj-11-c0j7f411 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6e2df5e68ee64e0b238c9933b63ab6f nmdc:dobj-11-rfcpbn11 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c58aef8eb55d4340c74407874ddd5d7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-qdqf1f31.1/nmdc_wfrbt-11-qdqf1f31.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c58aef8eb55d4340c74407874ddd5d7 nmdc:dobj-11-x8fsvs41 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kehaxy70/nmdc:wfrbt-11-72950944.1/nmdc_wfrbt-11-72950944.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c58aef8eb55d4340c74407874ddd5d7 nmdc:dobj-11-31bzjv69 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-kehaxy70 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qdqf1f31.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfrbt-11-qdqf1f31.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-72950944.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:892b1e4dcd8dc413236a1e008577156b nmdc:wfrbt-11-72950944.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-kehaxy70 +INFO:root:omics_processing_id: nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f80860812e425dd92344f1f056d3d7e nmdc:dobj-11-rvh6yz27 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-vy356n82 +INFO:root:New activity id created for nmdc:omprc-11-vy356n82 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8hwyac55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-8hwyac55.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad6ccb8e44538b418e5a90a47a3a95b8 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-8hwyac55.1/nmdc_wfrqc-11-8hwyac55.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad6ccb8e44538b418e5a90a47a3a95b8 nmdc:dobj-11-5qtn5j92 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8hwyac55.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6ff08bff105c41ebee127d980006ba79 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfrqc-11-8hwyac55.1/nmdc_wfrqc-11-8hwyac55.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ff08bff105c41ebee127d980006ba79 nmdc:dobj-11-91e3fm68 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8hwyac55.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 nmdc:wfrqc-11-8hwyac55.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-vy356n82 +INFO:root:New activity id created for nmdc:omprc-11-vy356n82 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-px30dj23.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c5a5690d01093f5eb72862fb98e0988 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c5a5690d01093f5eb72862fb98e0988 nmdc:dobj-11-7a0yqt89 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c2acd3eec955d6680787392cd3793c5 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c2acd3eec955d6680787392cd3793c5 nmdc:dobj-11-qs7ept71 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7711cd75bbcab369e2b44f73b2c01fcb +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7711cd75bbcab369e2b44f73b2c01fcb nmdc:dobj-11-g1vpkz33 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4babbf701f66184084f500079d31a005 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4babbf701f66184084f500079d31a005 nmdc:dobj-11-12gmwe06 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48c2645a14aecfee5bcbcd5e650a49ad +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vy356n82/nmdc:wfmgas-11-px30dj23.1/nmdc_wfmgas-11-px30dj23.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48c2645a14aecfee5bcbcd5e650a49ad nmdc:dobj-11-mqh5cr46 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-px30dj23.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ddf9068cb9d0e93f72e3ae1f6beeeba2 nmdc:wfmgas-11-px30dj23.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-vy356n82 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-vy356n82 INFO:root:omics_processing_id: nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52c9e32cf184310313c50a4b0f98f87f nmdc:dobj-11-20ss1t49 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52c9e32cf184310313c50a4b0f98f87f nmdc:dobj-11-s6h7wg98 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-prb0cv32 -INFO:root:New activity id created for nmdc:omprc-11-prb0cv32 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vz06d295.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrqc-11-vz06d295.1 +INFO:root:New activity id created for nmdc:omprc-11-prb0cv32 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gahryy88.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrqc-11-gahryy88.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42ea257e18361687ddf5a1c561971f3e -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrqc-11-vz06d295.1/nmdc_wfrqc-11-vz06d295.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42ea257e18361687ddf5a1c561971f3e nmdc:dobj-11-7qmypr67 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrqc-11-gahryy88.1/nmdc_wfrqc-11-gahryy88.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42ea257e18361687ddf5a1c561971f3e nmdc:dobj-11-mtaqfy78 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vz06d295.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gahryy88.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8892ad845b7a08506e97587ab0219691 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrqc-11-vz06d295.1/nmdc_wfrqc-11-vz06d295.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8892ad845b7a08506e97587ab0219691 nmdc:dobj-11-5p7e1462 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrqc-11-gahryy88.1/nmdc_wfrqc-11-gahryy88.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8892ad845b7a08506e97587ab0219691 nmdc:dobj-11-t0d3f194 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vz06d295.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3021b918990263d8bf877ff41bf62f09 nmdc:wfrqc-11-vz06d295.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gahryy88.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3021b918990263d8bf877ff41bf62f09 nmdc:wfrqc-11-gahryy88.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-prb0cv32 -INFO:root:New activity id created for nmdc:omprc-11-prb0cv32 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vjvbt705.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-vjvbt705.1 +INFO:root:New activity id created for nmdc:omprc-11-prb0cv32 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xa03qt36.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-xa03qt36.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:519e8feebab80f5ca632f919651a68b5 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-vjvbt705.1/nmdc_wfmgas-11-vjvbt705.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:519e8feebab80f5ca632f919651a68b5 nmdc:dobj-11-bgrnnj65 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-xa03qt36.1/nmdc_wfmgas-11-xa03qt36.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:519e8feebab80f5ca632f919651a68b5 nmdc:dobj-11-2ety1h38 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vjvbt705.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xa03qt36.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25bf97ed153656858b43652a17ee3744 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-vjvbt705.1/nmdc_wfmgas-11-vjvbt705.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25bf97ed153656858b43652a17ee3744 nmdc:dobj-11-qeqnrx89 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-xa03qt36.1/nmdc_wfmgas-11-xa03qt36.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25bf97ed153656858b43652a17ee3744 nmdc:dobj-11-p3xffa73 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vjvbt705.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xa03qt36.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fc0eb020cbf500b589498152428c5249 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-vjvbt705.1/nmdc_wfmgas-11-vjvbt705.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc0eb020cbf500b589498152428c5249 nmdc:dobj-11-9hdy1830 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-xa03qt36.1/nmdc_wfmgas-11-xa03qt36.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc0eb020cbf500b589498152428c5249 nmdc:dobj-11-6mrtt085 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vjvbt705.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xa03qt36.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c16092240ebabbe0ac347cb8c6a3561f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-vjvbt705.1/nmdc_wfmgas-11-vjvbt705.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c16092240ebabbe0ac347cb8c6a3561f nmdc:dobj-11-6my5ap43 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-xa03qt36.1/nmdc_wfmgas-11-xa03qt36.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c16092240ebabbe0ac347cb8c6a3561f nmdc:dobj-11-bkw42203 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vjvbt705.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xa03qt36.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:710bafb899ee5b54d745c5f8f10178b8 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-vjvbt705.1/nmdc_wfmgas-11-vjvbt705.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:710bafb899ee5b54d745c5f8f10178b8 nmdc:dobj-11-te4fzs72 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfmgas-11-xa03qt36.1/nmdc_wfmgas-11-xa03qt36.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:710bafb899ee5b54d745c5f8f10178b8 nmdc:dobj-11-2zqktd31 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vjvbt705.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3021b918990263d8bf877ff41bf62f09 nmdc:wfmgas-11-vjvbt705.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xa03qt36.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3021b918990263d8bf877ff41bf62f09 nmdc:wfmgas-11-xa03qt36.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-prb0cv32 -INFO:root:New activity id created for nmdc:omprc-11-prb0cv32 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-es9h1375.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1 +INFO:root:New activity id created for nmdc:omprc-11-prb0cv32 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-pxqh7822.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:673fd43b0ba6af4a04221b7553288e3c -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:673fd43b0ba6af4a04221b7553288e3c nmdc:dobj-11-c67jjy71 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:673fd43b0ba6af4a04221b7553288e3c nmdc:dobj-11-49ynps65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73cdf01b96a864c8af6b6404c9e2c557 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73cdf01b96a864c8af6b6404c9e2c557 nmdc:dobj-11-pw9gt944 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73cdf01b96a864c8af6b6404c9e2c557 nmdc:dobj-11-zr5vxc09 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:00cf10012ed2ab5fd30e4af4c45aa506 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00cf10012ed2ab5fd30e4af4c45aa506 nmdc:dobj-11-ebdayh15 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00cf10012ed2ab5fd30e4af4c45aa506 nmdc:dobj-11-pkk2sd91 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78ee66b725142022b978b88954280a9d -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78ee66b725142022b978b88954280a9d nmdc:dobj-11-hnt79e59 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78ee66b725142022b978b88954280a9d nmdc:dobj-11-hn7b4168 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1dfc047ba2e0f5eb215770777e96581 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1dfc047ba2e0f5eb215770777e96581 nmdc:dobj-11-g0pf5j67 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1dfc047ba2e0f5eb215770777e96581 nmdc:dobj-11-3k3chh92 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cfcf2defaa1760ebbb3f41e479d854ad -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfcf2defaa1760ebbb3f41e479d854ad nmdc:dobj-11-same7439 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfcf2defaa1760ebbb3f41e479d854ad nmdc:dobj-11-dwjpws40 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:170d1ae61e822af33e8808f9f579e702 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:170d1ae61e822af33e8808f9f579e702 nmdc:dobj-11-8mam1288 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:170d1ae61e822af33e8808f9f579e702 nmdc:dobj-11-hqfpwp98 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d558a4ade655a4995104fcf89a97fdfa -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d558a4ade655a4995104fcf89a97fdfa nmdc:dobj-11-yzqkmw51 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d558a4ade655a4995104fcf89a97fdfa nmdc:dobj-11-d0phvc56 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1149272190dabdc7eb40ae4dad2151e -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-es9h1375.1/nmdc_wfrbt-11-es9h1375.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1149272190dabdc7eb40ae4dad2151e nmdc:dobj-11-fy0ckp82 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prb0cv32/nmdc:wfrbt-11-pxqh7822.1/nmdc_wfrbt-11-pxqh7822.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1149272190dabdc7eb40ae4dad2151e nmdc:dobj-11-nzs93822 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-prb0cv32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-es9h1375.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3021b918990263d8bf877ff41bf62f09 nmdc:wfrbt-11-es9h1375.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pxqh7822.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3021b918990263d8bf877ff41bf62f09 nmdc:wfrbt-11-pxqh7822.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-prb0cv32 INFO:root:omics_processing_id: nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754dde7a211a1cd9ecfb990d799c86fc nmdc:dobj-11-cfzywz44 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754dde7a211a1cd9ecfb990d799c86fc nmdc:dobj-11-3k8g3430 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-wg551q49 -INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-98mn0w27.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-98mn0w27.1 +INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mdha6k07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-mdha6k07.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b2aacef76b2233c11c9b78d9cdd8490f -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-98mn0w27.1/nmdc_wfrqc-11-98mn0w27.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2aacef76b2233c11c9b78d9cdd8490f nmdc:dobj-11-ay2qcg38 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-mdha6k07.1/nmdc_wfrqc-11-mdha6k07.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2aacef76b2233c11c9b78d9cdd8490f nmdc:dobj-11-kajfch87 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-98mn0w27.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mdha6k07.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:976360d3303c62ead30c78611545360b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-98mn0w27.1/nmdc_wfrqc-11-98mn0w27.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:976360d3303c62ead30c78611545360b nmdc:dobj-11-p6fecp65 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrqc-11-mdha6k07.1/nmdc_wfrqc-11-mdha6k07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:976360d3303c62ead30c78611545360b nmdc:dobj-11-sqgkqt87 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-98mn0w27.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfrqc-11-98mn0w27.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mdha6k07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfrqc-11-mdha6k07.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-wg551q49 -INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-zspd4666.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-zspd4666.1 +INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5zdx9045.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9301ff56d934a5547d16b3872a8a7bd1 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-zspd4666.1/nmdc_wfmgas-11-zspd4666.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9301ff56d934a5547d16b3872a8a7bd1 nmdc:dobj-11-zqf7kw63 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9301ff56d934a5547d16b3872a8a7bd1 nmdc:dobj-11-b7zy4q85 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zspd4666.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:240379c705c2598b90752197e2aa8989 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-zspd4666.1/nmdc_wfmgas-11-zspd4666.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:240379c705c2598b90752197e2aa8989 nmdc:dobj-11-cc55ve78 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:240379c705c2598b90752197e2aa8989 nmdc:dobj-11-3mxfkq06 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zspd4666.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53e156196225b31e3a13394345c3623a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-zspd4666.1/nmdc_wfmgas-11-zspd4666.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53e156196225b31e3a13394345c3623a nmdc:dobj-11-4jnbfq66 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53e156196225b31e3a13394345c3623a nmdc:dobj-11-ksfhz953 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zspd4666.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc9d10f32066256bc9f37e6769bd21f5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-zspd4666.1/nmdc_wfmgas-11-zspd4666.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc9d10f32066256bc9f37e6769bd21f5 nmdc:dobj-11-bf3cxd42 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc9d10f32066256bc9f37e6769bd21f5 nmdc:dobj-11-x0j1za16 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zspd4666.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c315d571185b157f596d9a21884aa537 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-zspd4666.1/nmdc_wfmgas-11-zspd4666.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c315d571185b157f596d9a21884aa537 nmdc:dobj-11-f20v5q79 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfmgas-11-5zdx9045.1/nmdc_wfmgas-11-5zdx9045.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c315d571185b157f596d9a21884aa537 nmdc:dobj-11-vp2z6m37 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zspd4666.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfmgas-11-zspd4666.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5zdx9045.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfmgas-11-5zdx9045.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-wg551q49 -INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-wba4qw93.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1 +INFO:root:New activity id created for nmdc:omprc-11-wg551q49 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-tz3kj969.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21b08100a7f2d915a81862b906c6ae3b -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21b08100a7f2d915a81862b906c6ae3b nmdc:dobj-11-ftpnq439 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21b08100a7f2d915a81862b906c6ae3b nmdc:dobj-11-ywfpph95 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:54e0ddea48ee8d813764492555b0ecee -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54e0ddea48ee8d813764492555b0ecee nmdc:dobj-11-kghg8004 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54e0ddea48ee8d813764492555b0ecee nmdc:dobj-11-6ppkc770 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:038da6464f3c29fa2dd9f67041a9b32f -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:038da6464f3c29fa2dd9f67041a9b32f nmdc:dobj-11-fcnjr154 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:038da6464f3c29fa2dd9f67041a9b32f nmdc:dobj-11-y38jhy92 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31a7903e5c86cbe82392986253615bcf -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31a7903e5c86cbe82392986253615bcf nmdc:dobj-11-966nkh38 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31a7903e5c86cbe82392986253615bcf nmdc:dobj-11-w9vdse21 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ef970fcebe1b3873ea2c158b9b6cd19e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef970fcebe1b3873ea2c158b9b6cd19e nmdc:dobj-11-1k3tqe58 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef970fcebe1b3873ea2c158b9b6cd19e nmdc:dobj-11-v699zm24 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:14265744b93c11fc6ba858781cb48c88 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14265744b93c11fc6ba858781cb48c88 nmdc:dobj-11-p6j50t12 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14265744b93c11fc6ba858781cb48c88 nmdc:dobj-11-039mh411 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cf637d814c9beb9a726b1ba61b44b75 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cf637d814c9beb9a726b1ba61b44b75 nmdc:dobj-11-ebabnm61 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cf637d814c9beb9a726b1ba61b44b75 nmdc:dobj-11-6nc3kb98 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d097453c5bd6aca2e844c7836f19dcfa -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d097453c5bd6aca2e844c7836f19dcfa nmdc:dobj-11-c1y12351 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d097453c5bd6aca2e844c7836f19dcfa nmdc:dobj-11-e0275t53 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e979e1b9c4f241085492eab236b2829 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-wba4qw93.1/nmdc_wfrbt-11-wba4qw93.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e979e1b9c4f241085492eab236b2829 nmdc:dobj-11-5x6d7w75 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wg551q49/nmdc:wfrbt-11-tz3kj969.1/nmdc_wfrbt-11-tz3kj969.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e979e1b9c4f241085492eab236b2829 nmdc:dobj-11-v1hdx635 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-wg551q49 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wba4qw93.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfrbt-11-wba4qw93.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tz3kj969.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d9d07cea662e1a3f30d699e2177138b1 nmdc:wfrbt-11-tz3kj969.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-wg551q49 INFO:root:omics_processing_id: nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74621bf24161e2e072c651c0c489b521 nmdc:dobj-11-mbdfvp96 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74621bf24161e2e072c651c0c489b521 nmdc:dobj-11-mjgtqm98 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-wxmc9q81 -INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-p77cy508.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrqc-11-p77cy508.1 +INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-v3gqdy80.1 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nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfrqc-11-p77cy508.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-v3gqdy80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfrqc-11-v3gqdy80.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-wxmc9q81 -INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5h1xgq72.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-5h1xgq72.1 +INFO:root:New activity id created for nmdc:omprc-11-wxmc9q81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-abmkha83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-abmkha83.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:27447a319e39a9f2e1284dddb9bc57bb -INFO:root:New file path computed for 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-5h1xgq72.1/nmdc_wfmgas-11-5h1xgq72.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d11c1515e21c03b397833054bbfc6d2 nmdc:dobj-11-k46t7527 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfmgas-11-abmkha83.1/nmdc_wfmgas-11-abmkha83.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d11c1515e21c03b397833054bbfc6d2 nmdc:dobj-11-e1mj1851 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5h1xgq72.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-abmkha83.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31755609cea771c4ffd9cd27e3af227f -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bbaf4690e2435bbfff1e3fa037e3b1 nmdc:dobj-11-8jnva278 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bbaf4690e2435bbfff1e3fa037e3b1 nmdc:dobj-11-vjdrr266 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3a81e8a2e7369b8fbea40daf94e7238d -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a81e8a2e7369b8fbea40daf94e7238d nmdc:dobj-11-vx0de556 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a81e8a2e7369b8fbea40daf94e7238d nmdc:dobj-11-katgpd88 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:605c505e6eb56aa78231f4adec6c6677 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:605c505e6eb56aa78231f4adec6c6677 nmdc:dobj-11-2gq5kw92 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:605c505e6eb56aa78231f4adec6c6677 nmdc:dobj-11-bavcm973 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 nmdc:dobj-11-sq20kr83 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3505b3e7a3ea7c4bef029a5a8e7d35e0 nmdc:dobj-11-tt8h6n26 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 nmdc:dobj-11-rfaq5v08 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4cc1fd846a6f008a075c37d69b9a1f8 nmdc:dobj-11-t47mes72 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ef4135167361ad749a7733e5861c8c6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ef4135167361ad749a7733e5861c8c6 nmdc:dobj-11-yegdsp04 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ef4135167361ad749a7733e5861c8c6 nmdc:dobj-11-yfgq8937 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:11cac1e08774c7809b9b8b1e44b251fd -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11cac1e08774c7809b9b8b1e44b251fd nmdc:dobj-11-7h4dgj40 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11cac1e08774c7809b9b8b1e44b251fd nmdc:dobj-11-xkaksz40 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 nmdc:dobj-11-89tyjk78 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b74cfa8e60ac4919d45d81a2d53cef4 nmdc:dobj-11-sz2tw755 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6935cee3be218ffa94d2b39f92f19f9f -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-b8xntz57.1/nmdc_wfrbt-11-b8xntz57.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6935cee3be218ffa94d2b39f92f19f9f nmdc:dobj-11-tz1g8q07 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wxmc9q81/nmdc:wfrbt-11-dwbnb755.1/nmdc_wfrbt-11-dwbnb755.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6935cee3be218ffa94d2b39f92f19f9f nmdc:dobj-11-9v4hbd10 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-wxmc9q81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b8xntz57.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfrbt-11-b8xntz57.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwbnb755.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a4aaa87e7d724ea07496386fb4f03d4a nmdc:wfrbt-11-dwbnb755.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-wxmc9q81 INFO:root:omics_processing_id: nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c139345a1c2ba3d6883a53a85463e8e4 nmdc:dobj-11-8w9sdk11 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c139345a1c2ba3d6883a53a85463e8e4 nmdc:dobj-11-nxfsmy78 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-tr1vzf47 -INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xs68ea95.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-xs68ea95.1 +INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-e28gbb98.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-e28gbb98.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e397c1b454dc84f97f1bc57052c7193 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-xs68ea95.1/nmdc_wfrqc-11-xs68ea95.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e397c1b454dc84f97f1bc57052c7193 nmdc:dobj-11-s1s9mf97 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-e28gbb98.1/nmdc_wfrqc-11-e28gbb98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e397c1b454dc84f97f1bc57052c7193 nmdc:dobj-11-5ssdwz21 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xs68ea95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-e28gbb98.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7009ce6e0aa4cc192ce7aea732fbccd -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-xs68ea95.1/nmdc_wfrqc-11-xs68ea95.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7009ce6e0aa4cc192ce7aea732fbccd nmdc:dobj-11-pnzf1552 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrqc-11-e28gbb98.1/nmdc_wfrqc-11-e28gbb98.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7009ce6e0aa4cc192ce7aea732fbccd nmdc:dobj-11-k15rn380 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xs68ea95.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfrqc-11-xs68ea95.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-e28gbb98.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfrqc-11-e28gbb98.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-tr1vzf47 -INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x116ba93.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-x116ba93.1 +INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-g4bdyt17.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:472cd76f936bba9446e337c328f435e1 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-x116ba93.1/nmdc_wfmgas-11-x116ba93.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:472cd76f936bba9446e337c328f435e1 nmdc:dobj-11-c852a079 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:472cd76f936bba9446e337c328f435e1 nmdc:dobj-11-dp9xj242 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x116ba93.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ba158e8cc9a5dfc54732fb0e085fe73 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-x116ba93.1/nmdc_wfmgas-11-x116ba93.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ba158e8cc9a5dfc54732fb0e085fe73 nmdc:dobj-11-k8sxvm82 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ba158e8cc9a5dfc54732fb0e085fe73 nmdc:dobj-11-frz65n12 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x116ba93.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34672ea879a19c766f764451f0b968aa -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-x116ba93.1/nmdc_wfmgas-11-x116ba93.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34672ea879a19c766f764451f0b968aa nmdc:dobj-11-4s6x0d12 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34672ea879a19c766f764451f0b968aa nmdc:dobj-11-zd12ea55 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x116ba93.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbed2d55f56430a821587ae24af5d6bb -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-x116ba93.1/nmdc_wfmgas-11-x116ba93.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbed2d55f56430a821587ae24af5d6bb nmdc:dobj-11-at5f5p88 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbed2d55f56430a821587ae24af5d6bb nmdc:dobj-11-r1bnq931 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x116ba93.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d664b59e79df6b3e7d8f20019231dc1 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-x116ba93.1/nmdc_wfmgas-11-x116ba93.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d664b59e79df6b3e7d8f20019231dc1 nmdc:dobj-11-4mta8w52 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfmgas-11-g4bdyt17.1/nmdc_wfmgas-11-g4bdyt17.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d664b59e79df6b3e7d8f20019231dc1 nmdc:dobj-11-frndm453 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x116ba93.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfmgas-11-x116ba93.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-g4bdyt17.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfmgas-11-g4bdyt17.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-tr1vzf47 -INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-4qrftk95.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1 +INFO:root:New activity id created for nmdc:omprc-11-tr1vzf47 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-b2v6rf11.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47183e38332a6949e0b723540d3f522b -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47183e38332a6949e0b723540d3f522b nmdc:dobj-11-kj3zfz91 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47183e38332a6949e0b723540d3f522b nmdc:dobj-11-4xef7y74 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b81eca09f6ce1b5b749446b273a92d7 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b81eca09f6ce1b5b749446b273a92d7 nmdc:dobj-11-543syf33 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b81eca09f6ce1b5b749446b273a92d7 nmdc:dobj-11-6zfj6w11 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96ceded2ef09bf9decce3a8486d5599d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96ceded2ef09bf9decce3a8486d5599d nmdc:dobj-11-sg5dc658 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96ceded2ef09bf9decce3a8486d5599d nmdc:dobj-11-8gk4me20 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 nmdc:dobj-11-c8thet67 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a48173c9eeca2eeb9bd2f15ec4d4c5e7 nmdc:dobj-11-zz148z17 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f73c4622400bb304daaeec954cdd25b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f73c4622400bb304daaeec954cdd25b nmdc:dobj-11-pafh8248 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f73c4622400bb304daaeec954cdd25b nmdc:dobj-11-42ykn492 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6324bb32dd9589af0344fd2266d9360 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6324bb32dd9589af0344fd2266d9360 nmdc:dobj-11-e2cyb504 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6324bb32dd9589af0344fd2266d9360 nmdc:dobj-11-q7f3e254 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b205ef3e409a285e33a2375934cecbec -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b205ef3e409a285e33a2375934cecbec nmdc:dobj-11-5zmgwh72 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b205ef3e409a285e33a2375934cecbec nmdc:dobj-11-ka0n1h72 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a7a236d19019e0d4e21c6f61a7f109b -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a7a236d19019e0d4e21c6f61a7f109b nmdc:dobj-11-16cd5e53 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a7a236d19019e0d4e21c6f61a7f109b nmdc:dobj-11-wf59er11 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26d4341d79dc1684a18dfef485301de9 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-4qrftk95.1/nmdc_wfrbt-11-4qrftk95.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26d4341d79dc1684a18dfef485301de9 nmdc:dobj-11-s1370t53 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tr1vzf47/nmdc:wfrbt-11-b2v6rf11.1/nmdc_wfrbt-11-b2v6rf11.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26d4341d79dc1684a18dfef485301de9 nmdc:dobj-11-ttvf7e40 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-tr1vzf47 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4qrftk95.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfrbt-11-4qrftk95.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b2v6rf11.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ac9dd3482cfe78527ae8f86d2c5bf5f1 nmdc:wfrbt-11-b2v6rf11.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-tr1vzf47 INFO:root:omics_processing_id: nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd43946edb26961e1913c8830f54e5cf nmdc:dobj-11-tcef9507 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd43946edb26961e1913c8830f54e5cf nmdc:dobj-11-b386yr13 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-g4095b91 -INFO:root:New activity id created for nmdc:omprc-11-g4095b91 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-tv5ap574.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrqc-11-tv5ap574.1 +INFO:root:New activity id created for nmdc:omprc-11-g4095b91 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hcwr4r62.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrqc-11-hcwr4r62.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c35cfb19aa8ab125a2c23506526816ec -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrqc-11-tv5ap574.1/nmdc_wfrqc-11-tv5ap574.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c35cfb19aa8ab125a2c23506526816ec nmdc:dobj-11-p2q18506 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrqc-11-hcwr4r62.1/nmdc_wfrqc-11-hcwr4r62.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c35cfb19aa8ab125a2c23506526816ec nmdc:dobj-11-6tpmws89 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tv5ap574.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hcwr4r62.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea8442421f1738797fb1085314cf67e9 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrqc-11-tv5ap574.1/nmdc_wfrqc-11-tv5ap574.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea8442421f1738797fb1085314cf67e9 nmdc:dobj-11-e02khx52 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrqc-11-hcwr4r62.1/nmdc_wfrqc-11-hcwr4r62.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea8442421f1738797fb1085314cf67e9 nmdc:dobj-11-q6aeyg31 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tv5ap574.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfrqc-11-tv5ap574.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hcwr4r62.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfrqc-11-hcwr4r62.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-g4095b91 -INFO:root:New activity id created for nmdc:omprc-11-g4095b91 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8v04e190.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-8v04e190.1 +INFO:root:New activity id created for nmdc:omprc-11-g4095b91 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2nsn2d68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:83e82ee96e83096f8011e524a70c08a2 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-8v04e190.1/nmdc_wfmgas-11-8v04e190.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83e82ee96e83096f8011e524a70c08a2 nmdc:dobj-11-9fredk30 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83e82ee96e83096f8011e524a70c08a2 nmdc:dobj-11-p7297f74 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8v04e190.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3b6a61384490607058dbd68e830b19b -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-8v04e190.1/nmdc_wfmgas-11-8v04e190.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3b6a61384490607058dbd68e830b19b nmdc:dobj-11-2x286b22 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3b6a61384490607058dbd68e830b19b nmdc:dobj-11-736hz597 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8v04e190.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72ccfd42865316b6cc8c8dc9695f2c19 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-8v04e190.1/nmdc_wfmgas-11-8v04e190.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72ccfd42865316b6cc8c8dc9695f2c19 nmdc:dobj-11-75t52g16 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72ccfd42865316b6cc8c8dc9695f2c19 nmdc:dobj-11-s4am0j41 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8v04e190.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c4d08b0edc259c2a106606221061f0e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-8v04e190.1/nmdc_wfmgas-11-8v04e190.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c4d08b0edc259c2a106606221061f0e nmdc:dobj-11-26pfk913 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c4d08b0edc259c2a106606221061f0e nmdc:dobj-11-36f3ad12 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8v04e190.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-8v04e190.1/nmdc_wfmgas-11-8v04e190.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 nmdc:dobj-11-1pe7xr63 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfmgas-11-2nsn2d68.1/nmdc_wfmgas-11-2nsn2d68.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c0d0fb94ea5a032e2bd7f8179919c58 nmdc:dobj-11-21k5pq67 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8v04e190.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfmgas-11-8v04e190.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2nsn2d68.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f311a7ff90a56811d195c02739c75b56 nmdc:dobj-11-48vehx68 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f311a7ff90a56811d195c02739c75b56 nmdc:dobj-11-9hnn5k48 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b913564fdf48c173240c6cb1d43fab57 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b913564fdf48c173240c6cb1d43fab57 nmdc:dobj-11-pgz87m73 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b913564fdf48c173240c6cb1d43fab57 nmdc:dobj-11-r0gf7m78 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 nmdc:dobj-11-djbp2z89 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e1bb5efcfd144d7da2bc8e2578c3674 nmdc:dobj-11-r7277t86 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2089bb738e19acf397b874c7ba1ee213 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2089bb738e19acf397b874c7ba1ee213 nmdc:dobj-11-f05asw40 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2089bb738e19acf397b874c7ba1ee213 nmdc:dobj-11-j16apa48 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 nmdc:dobj-11-871h7z47 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ab1b4a7fe3a204df1dfc70de8711f4 nmdc:dobj-11-m4fg0t32 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60adf737df1ff873a4134e0b09abe756 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60adf737df1ff873a4134e0b09abe756 nmdc:dobj-11-jgf13s09 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60adf737df1ff873a4134e0b09abe756 nmdc:dobj-11-k8z4qv66 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4b16136fb23593be83b69ddd5286cbe -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4b16136fb23593be83b69ddd5286cbe nmdc:dobj-11-f1y8x620 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4b16136fb23593be83b69ddd5286cbe nmdc:dobj-11-fnyef341 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:469261fb4820f3f3ad54d0abadd789a6 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:469261fb4820f3f3ad54d0abadd789a6 nmdc:dobj-11-d7kc3j51 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:469261fb4820f3f3ad54d0abadd789a6 nmdc:dobj-11-em75ck24 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ceec1fb674297db511106b4fe435a5a6 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-ywd4n043.1/nmdc_wfrbt-11-ywd4n043.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ceec1fb674297db511106b4fe435a5a6 nmdc:dobj-11-rh1d4c83 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g4095b91/nmdc:wfrbt-11-m6cq5141.1/nmdc_wfrbt-11-m6cq5141.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ceec1fb674297db511106b4fe435a5a6 nmdc:dobj-11-jt5w3j77 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g4095b91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ywd4n043.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b913e27411681a940dd6ba32dba07d09 nmdc:wfrbt-11-ywd4n043.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m6cq5141.1_kraken2_krona.html 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nmdc:8b893c6adec9b20905ae26e886f077d7 nmdc:wfrqc-11-ws278z63.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x51ysm94.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8b893c6adec9b20905ae26e886f077d7 nmdc:wfrqc-11-x51ysm94.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5yy9k739 -INFO:root:New activity id created for nmdc:omprc-11-5yy9k739 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7psbr015.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-7psbr015.1 +INFO:root:New activity id created for nmdc:omprc-11-5yy9k739 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x3bsa555.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-x3bsa555.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2809e8e79869a8e41acac3f5b2ad207f -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-7psbr015.1/nmdc_wfmgas-11-7psbr015.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2809e8e79869a8e41acac3f5b2ad207f nmdc:dobj-11-t8s1dt69 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-x3bsa555.1/nmdc_wfmgas-11-x3bsa555.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2809e8e79869a8e41acac3f5b2ad207f nmdc:dobj-11-p16n8t71 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7psbr015.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3bsa555.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6c0e1781197cfa53b82aef7024b3e9ab -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-7psbr015.1/nmdc_wfmgas-11-7psbr015.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbd18d892fd1c6a852a7273930aa9cd1 nmdc:dobj-11-ajshr491 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-x3bsa555.1/nmdc_wfmgas-11-x3bsa555.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbd18d892fd1c6a852a7273930aa9cd1 nmdc:dobj-11-0yww2e83 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7psbr015.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3bsa555.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c417efe47a036338b8a49611337f9db -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-7psbr015.1/nmdc_wfmgas-11-7psbr015.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c417efe47a036338b8a49611337f9db nmdc:dobj-11-na0xr802 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-x3bsa555.1/nmdc_wfmgas-11-x3bsa555.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c417efe47a036338b8a49611337f9db nmdc:dobj-11-4at2k847 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7psbr015.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3bsa555.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d04492608b77610683e34a7936955948 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-7psbr015.1/nmdc_wfmgas-11-7psbr015.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d04492608b77610683e34a7936955948 nmdc:dobj-11-nsprja69 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfmgas-11-x3bsa555.1/nmdc_wfmgas-11-x3bsa555.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d04492608b77610683e34a7936955948 nmdc:dobj-11-pwvkcb25 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7psbr015.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:8b893c6adec9b20905ae26e886f077d7 nmdc:wfmgas-11-7psbr015.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x3bsa555.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88cb95d5dcac01adf30dac966bae9a55 nmdc:dobj-11-bjgazr13 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88cb95d5dcac01adf30dac966bae9a55 nmdc:dobj-11-0ezb0j72 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:770eea8234443b382b0c39bcd8d054de -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:770eea8234443b382b0c39bcd8d054de nmdc:dobj-11-5d8tnx25 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:770eea8234443b382b0c39bcd8d054de nmdc:dobj-11-d67pr204 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:49919109da7a01549be2212d4a4b8a68 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49919109da7a01549be2212d4a4b8a68 nmdc:dobj-11-n8bj0f41 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49919109da7a01549be2212d4a4b8a68 nmdc:dobj-11-xh76dq92 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e43ac2b9303f3360570a906ad041ed7 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e43ac2b9303f3360570a906ad041ed7 nmdc:dobj-11-mr9n6a47 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e43ac2b9303f3360570a906ad041ed7 nmdc:dobj-11-fk1qhp05 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 nmdc:dobj-11-ak9vf405 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2df1b62c8e79e9d4a4a0d9bebbd83f99 nmdc:dobj-11-n4btmr71 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41a235a0bf73ce773fa4181dbb338049 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41a235a0bf73ce773fa4181dbb338049 nmdc:dobj-11-cbwhrp46 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41a235a0bf73ce773fa4181dbb338049 nmdc:dobj-11-0yppat24 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0d619bb56c7393d4e4f55ff535d2647 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0d619bb56c7393d4e4f55ff535d2647 nmdc:dobj-11-3938mn38 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0d619bb56c7393d4e4f55ff535d2647 nmdc:dobj-11-5d90zk63 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:329c66c52b773c8668a4d3b0790c599c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:329c66c52b773c8668a4d3b0790c599c nmdc:dobj-11-b5we0r22 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:329c66c52b773c8668a4d3b0790c599c nmdc:dobj-11-1bt52890 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b64c8f7063313787ff247ef0262a8aec -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-5579f428.1/nmdc_wfrbt-11-5579f428.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b64c8f7063313787ff247ef0262a8aec nmdc:dobj-11-13w78b15 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5yy9k739/nmdc:wfrbt-11-j2kqyn56.1/nmdc_wfrbt-11-j2kqyn56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b64c8f7063313787ff247ef0262a8aec nmdc:dobj-11-8ndbjb31 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5yy9k739 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5579f428.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8b893c6adec9b20905ae26e886f077d7 nmdc:wfrbt-11-5579f428.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j2kqyn56.1_kraken2_krona.html 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfrqc-11-fajeac44.1/nmdc_wfrqc-11-fajeac44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1be9f83589f61265354476e3f6ccae9c nmdc:dobj-11-18fy6960 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-2d16h818 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fajeac44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47619b9fb6a7465e25999a80826badac +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfrqc-11-fajeac44.1/nmdc_wfrqc-11-fajeac44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47619b9fb6a7465e25999a80826badac nmdc:dobj-11-kh0rey16 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-2d16h818 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fajeac44.1_filterStats.txt 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nmdc_wfmgas-11-q1e85944.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56e60e4a5424e7d07b1dba85b8013a04 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1/nmdc_wfmgas-11-q1e85944.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56e60e4a5424e7d07b1dba85b8013a04 nmdc:dobj-11-1ydtah87 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-2d16h818 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q1e85944.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c823f4d6dac3f35df41448f2de60e69 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1/nmdc_wfmgas-11-q1e85944.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c823f4d6dac3f35df41448f2de60e69 nmdc:dobj-11-gys0e436 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-2d16h818/nmdc:wfmgas-11-q1e85944.1/nmdc_wfmgas-11-q1e85944.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81e045c32f418f2b5a62e22902e60a6f nmdc:dobj-11-6gjfta33 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-2d16h818 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-q1e85944.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:761f287faac154a3b66a0c89c82738d4 nmdc:wfmgas-11-q1e85944.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-2d16h818 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-2d16h818 +INFO:root:omics_processing_id: nmdc:omprc-11-85jsxt33 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f65059f9df59fe318f2780fc2e0605d nmdc:dobj-11-ffd3te21 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nmdc:5e9f01140cda71a4be6fbb9fba896d38 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfrqc-11-fj1qkn28.1/nmdc_wfrqc-11-fj1qkn28.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e9f01140cda71a4be6fbb9fba896d38 nmdc:dobj-11-yme9yr47 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-85jsxt33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fj1qkn28.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8253bcdcd0387177ff895c38a047c719 nmdc:wfrqc-11-fj1qkn28.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-85jsxt33 +INFO:root:New activity id created for nmdc:omprc-11-85jsxt33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-t1rq2j82.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1 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scaffold fasta for nmdc:omprc-11-85jsxt33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t1rq2j82.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f20a2e7cc9051159641ca5147fc7382 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1/nmdc_wfmgas-11-t1rq2j82.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f20a2e7cc9051159641ca5147fc7382 nmdc:dobj-11-4xecsa56 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-85jsxt33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t1rq2j82.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c72608f8b3bd84bf80868d30e02aab72 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-85jsxt33/nmdc:wfmgas-11-t1rq2j82.1/nmdc_wfmgas-11-t1rq2j82.1_assembly.agp 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfrqc-11-wbbb8149.1/nmdc_wfrqc-11-wbbb8149.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9333de207aace2cea9ea955e88bdec9b nmdc:dobj-11-3ztayr76 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-d6c4q479 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wbbb8149.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d75540d565682d791dc45298f9de54fc +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfrqc-11-wbbb8149.1/nmdc_wfrqc-11-wbbb8149.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d75540d565682d791dc45298f9de54fc nmdc:dobj-11-7vgahw92 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-d6c4q479 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wbbb8149.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:7a197d54a06a37090bb50eaf37c93115 nmdc:wfrqc-11-wbbb8149.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-d6c4q479 +INFO:root:New activity id created for nmdc:omprc-11-d6c4q479 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0zymhj17.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5352457da0e9bb72bf0ae6088939908d +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1/nmdc_wfmgas-11-0zymhj17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5352457da0e9bb72bf0ae6088939908d nmdc:dobj-11-kbxnpw56 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-d6c4q479 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0zymhj17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58c1cb4a44fddf66e9805298fa4b53e2 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1/nmdc_wfmgas-11-0zymhj17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58c1cb4a44fddf66e9805298fa4b53e2 nmdc:dobj-11-5e6v2m36 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-d6c4q479 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0zymhj17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c770451eda4fa76c8f06e4eac0cb5800 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d6c4q479/nmdc:wfmgas-11-0zymhj17.1/nmdc_wfmgas-11-0zymhj17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c770451eda4fa76c8f06e4eac0cb5800 nmdc:dobj-11-yqdyz393 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file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd13ac21b6f0a108144db9d5e73dce51 nmdc:dobj-11-933tdz42 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xmymtb31.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:777ba469c171b72a370b3574aa51698b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-xmymtb31.1/nmdc_wfrbt-11-xmymtb31.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:777ba469c171b72a370b3574aa51698b nmdc:dobj-11-5rwepn63 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:777ba469c171b72a370b3574aa51698b nmdc:dobj-11-4j1d7j27 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xmymtb31.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9139fb2f1cafb0e7a29de83443d89df6 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-xmymtb31.1/nmdc_wfrbt-11-xmymtb31.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9139fb2f1cafb0e7a29de83443d89df6 nmdc:dobj-11-depwan15 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9139fb2f1cafb0e7a29de83443d89df6 nmdc:dobj-11-jnsvp997 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xmymtb31.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd42771008a5df5cacdc5cbe3cb296d6 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-xmymtb31.1/nmdc_wfrbt-11-xmymtb31.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd42771008a5df5cacdc5cbe3cb296d6 nmdc:dobj-11-vgvmdq74 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd42771008a5df5cacdc5cbe3cb296d6 nmdc:dobj-11-ez4xgh54 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xmymtb31.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7c470106d10e95c1834c089f94607bed -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-xmymtb31.1/nmdc_wfrbt-11-xmymtb31.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c470106d10e95c1834c089f94607bed nmdc:dobj-11-x5bm1e17 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keywj942/nmdc:wfrbt-11-mnb6c929.1/nmdc_wfrbt-11-mnb6c929.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c470106d10e95c1834c089f94607bed nmdc:dobj-11-fdvty722 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-keywj942 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xmymtb31.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f418c728a009dc1de4528dc5b990e405 nmdc:wfrbt-11-xmymtb31.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mnb6c929.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f418c728a009dc1de4528dc5b990e405 nmdc:wfrbt-11-mnb6c929.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-keywj942 +INFO:root:omics_processing_id: nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38116da337f1e868ba6fec5a184ba2fc nmdc:dobj-11-k0hf9a37 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-bzxddj92 +INFO:root:New activity id created for nmdc:omprc-11-bzxddj92 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fnpccc97.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-fnpccc97.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f69990b0ca36244479b8e2cf5059a2b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-fnpccc97.1/nmdc_wfrqc-11-fnpccc97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f69990b0ca36244479b8e2cf5059a2b nmdc:dobj-11-407m8372 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fnpccc97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6de02a2206630c8fa68f47f67235c3ce +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfrqc-11-fnpccc97.1/nmdc_wfrqc-11-fnpccc97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6de02a2206630c8fa68f47f67235c3ce nmdc:dobj-11-5xgms068 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fnpccc97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:5ab2faba70b7dc9853cecf68af4576c8 nmdc:wfrqc-11-fnpccc97.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-bzxddj92 +INFO:root:New activity id created for nmdc:omprc-11-bzxddj92 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-9k19zq17.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:422bde67781e860175c83611a11d317a +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:422bde67781e860175c83611a11d317a nmdc:dobj-11-vkz89g63 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:011a494743bdca4d60822bd753d267da +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:011a494743bdca4d60822bd753d267da nmdc:dobj-11-evcp9d48 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0d11b4879140511f9145b1ff462a7c81 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d11b4879140511f9145b1ff462a7c81 nmdc:dobj-11-s295vy19 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd08b76d94a1499d6dccd314d7564fcb +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd08b76d94a1499d6dccd314d7564fcb nmdc:dobj-11-6ch74579 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:824e98c7b6dd7cfb5b35d2c37b7fb0be +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-bzxddj92/nmdc:wfmgas-11-9k19zq17.1/nmdc_wfmgas-11-9k19zq17.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:824e98c7b6dd7cfb5b35d2c37b7fb0be nmdc:dobj-11-39y7cs86 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9k19zq17.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:5ab2faba70b7dc9853cecf68af4576c8 nmdc:wfmgas-11-9k19zq17.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-bzxddj92 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-bzxddj92 +INFO:root:omics_processing_id: nmdc:omprc-11-4ptjh074 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f098da7fe12707ec59757cd2dfb94d26 nmdc:dobj-11-864m2896 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-4ptjh074 +INFO:root:New activity id created for nmdc:omprc-11-4ptjh074 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-bbkdsq06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-bbkdsq06.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42505d3bc1abb992c5839e8994cc6c86 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-bbkdsq06.1/nmdc_wfrqc-11-bbkdsq06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42505d3bc1abb992c5839e8994cc6c86 nmdc:dobj-11-12bnjm31 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-4ptjh074 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bbkdsq06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d2bcfe348cd5fd0ea0823f52328fe2f6 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfrqc-11-bbkdsq06.1/nmdc_wfrqc-11-bbkdsq06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2bcfe348cd5fd0ea0823f52328fe2f6 nmdc:dobj-11-bgqyrh14 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4ptjh074 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contigs fasta for nmdc:omprc-11-4ptjh074 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8xnkq807.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ec1e0396d5c08d1e050c1652d784f90 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1/nmdc_wfmgas-11-8xnkq807.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ec1e0396d5c08d1e050c1652d784f90 nmdc:dobj-11-v3wfwq23 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-4ptjh074 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8xnkq807.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c7b5026a6eec96bfca8952bc4b5428d +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1/nmdc_wfmgas-11-8xnkq807.1_covstats.txt 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Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4ptjh074/nmdc:wfmgas-11-8xnkq807.1/nmdc_wfmgas-11-8xnkq807.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2f329016e730437180ba6eab7235a84 nmdc:dobj-11-z4r7gw15 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-4ptjh074 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8xnkq807.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3bbc2e110acd6e6b200fd43814337b94 nmdc:wfmgas-11-8xnkq807.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-4ptjh074 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-4ptjh074 +INFO:root:omics_processing_id: nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19edfbb924938737398f443c7342d913 nmdc:dobj-11-2yzp7791 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-b2wgvw58 +INFO:root:New activity id created for nmdc:omprc-11-b2wgvw58 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9h7kh461.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-9h7kh461.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d545791b4aabe329934d489074e8355a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-9h7kh461.1/nmdc_wfrqc-11-9h7kh461.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d545791b4aabe329934d489074e8355a nmdc:dobj-11-5mphw073 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9h7kh461.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98efa2073a9a68e46fbba39c166f55f3 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfrqc-11-9h7kh461.1/nmdc_wfrqc-11-9h7kh461.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98efa2073a9a68e46fbba39c166f55f3 nmdc:dobj-11-xce7y969 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9h7kh461.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3c401e2ee440df4d96027e3594618104 nmdc:wfrqc-11-9h7kh461.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-b2wgvw58 +INFO:root:New activity id created for nmdc:omprc-11-b2wgvw58 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-39g5yk78.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b67bbda2f0dbbeee56f90d9360b615c +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b67bbda2f0dbbeee56f90d9360b615c nmdc:dobj-11-akm5a581 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e46c30d89c3d8fbf7007e1dd144e070 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e46c30d89c3d8fbf7007e1dd144e070 nmdc:dobj-11-ry8cwk04 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:efd90d7b508360c3c0e4067cf039f15f +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efd90d7b508360c3c0e4067cf039f15f nmdc:dobj-11-3nfewy61 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5fd489af1a69328b86c2d5b1d42ffe57 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fd489af1a69328b86c2d5b1d42ffe57 nmdc:dobj-11-7fh6e509 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f778360d55e8fb9c7a0d8c3a1ab51632 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b2wgvw58/nmdc:wfmgas-11-39g5yk78.1/nmdc_wfmgas-11-39g5yk78.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f778360d55e8fb9c7a0d8c3a1ab51632 nmdc:dobj-11-tfkhq219 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-39g5yk78.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3c401e2ee440df4d96027e3594618104 nmdc:wfmgas-11-39g5yk78.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-b2wgvw58 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-b2wgvw58 +INFO:root:omics_processing_id: nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ab91c737308518038e6e4c0925bd12f nmdc:dobj-11-0re6ks73 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0yxa3962 +INFO:root:New activity id created for nmdc:omprc-11-0yxa3962 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-z819et30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-z819et30.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92146e7696d17b02f330767b56bc0b1b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-z819et30.1/nmdc_wfrqc-11-z819et30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92146e7696d17b02f330767b56bc0b1b nmdc:dobj-11-7n1ygb80 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z819et30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c7df8dfccd30a45c2d7451ec028cfe4e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfrqc-11-z819et30.1/nmdc_wfrqc-11-z819et30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7df8dfccd30a45c2d7451ec028cfe4e nmdc:dobj-11-hph9t163 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z819et30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4cbc930855e87f6cc3f2255b875ccade nmdc:wfrqc-11-z819et30.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-0yxa3962 +INFO:root:New activity id created for nmdc:omprc-11-0yxa3962 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ctc4s018.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a70203a1dd351901ca8661108d133f35 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a70203a1dd351901ca8661108d133f35 nmdc:dobj-11-vf1wwm35 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5247fbeae0759423c738b888ec0e7645 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5247fbeae0759423c738b888ec0e7645 nmdc:dobj-11-wn8crf04 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ece40f6ad4cba50944ba432ed580ccbe +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ece40f6ad4cba50944ba432ed580ccbe nmdc:dobj-11-08yjkb02 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a0ad7bf52dbaf125c49bdb6aacb34ad +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a0ad7bf52dbaf125c49bdb6aacb34ad nmdc:dobj-11-ytj91586 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23180c63164c4420719172addb6fe325 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0yxa3962/nmdc:wfmgas-11-ctc4s018.1/nmdc_wfmgas-11-ctc4s018.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23180c63164c4420719172addb6fe325 nmdc:dobj-11-45rw5192 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ctc4s018.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4cbc930855e87f6cc3f2255b875ccade nmdc:wfmgas-11-ctc4s018.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-0yxa3962 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-0yxa3962 INFO:root:omics_processing_id: nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:300109666a890c83f10c431a6245561a nmdc:dobj-11-6csgj343 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:300109666a890c83f10c431a6245561a nmdc:dobj-11-wx4qpj82 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a0bq3b03 -INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-jmttqr93.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-jmttqr93.1 +INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gmnv5v10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-gmnv5v10.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b8ac90292b803e8882c8aa601233c1e -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-jmttqr93.1/nmdc_wfrqc-11-jmttqr93.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b8ac90292b803e8882c8aa601233c1e nmdc:dobj-11-13ma7390 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-gmnv5v10.1/nmdc_wfrqc-11-gmnv5v10.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b8ac90292b803e8882c8aa601233c1e nmdc:dobj-11-6ya5s707 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jmttqr93.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gmnv5v10.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26469cdd3afb5ae9a6547fc32bf3d66b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-jmttqr93.1/nmdc_wfrqc-11-jmttqr93.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26469cdd3afb5ae9a6547fc32bf3d66b nmdc:dobj-11-q4m4mh80 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrqc-11-gmnv5v10.1/nmdc_wfrqc-11-gmnv5v10.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26469cdd3afb5ae9a6547fc32bf3d66b nmdc:dobj-11-g3q4wv02 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jmttqr93.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfrqc-11-jmttqr93.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gmnv5v10.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfrqc-11-gmnv5v10.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-a0bq3b03 -INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-1rh26v94.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-1rh26v94.1 +INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-p9h7fy68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65c2509060ad834fdd85acb62acf817c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-1rh26v94.1/nmdc_wfmgas-11-1rh26v94.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65c2509060ad834fdd85acb62acf817c nmdc:dobj-11-83725c18 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1/nmdc_wfmgas-11-p9h7fy68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65c2509060ad834fdd85acb62acf817c nmdc:dobj-11-wpzt9a27 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rh26v94.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p9h7fy68.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c2e16d42788048d6cfea18e7c102f84 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-1rh26v94.1/nmdc_wfmgas-11-1rh26v94.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c2e16d42788048d6cfea18e7c102f84 nmdc:dobj-11-8d980363 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1/nmdc_wfmgas-11-p9h7fy68.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c2e16d42788048d6cfea18e7c102f84 nmdc:dobj-11-z8e64n59 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rh26v94.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p9h7fy68.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:818c1714f9de070016d6ddda3ecf5ea8 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-1rh26v94.1/nmdc_wfmgas-11-1rh26v94.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:818c1714f9de070016d6ddda3ecf5ea8 nmdc:dobj-11-qkz29a59 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1/nmdc_wfmgas-11-p9h7fy68.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:818c1714f9de070016d6ddda3ecf5ea8 nmdc:dobj-11-w5ekwz20 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rh26v94.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p9h7fy68.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3596a536ff27f6cd79edb26c6f99ab7 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-1rh26v94.1/nmdc_wfmgas-11-1rh26v94.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3596a536ff27f6cd79edb26c6f99ab7 nmdc:dobj-11-vtyqzm82 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1/nmdc_wfmgas-11-p9h7fy68.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3596a536ff27f6cd79edb26c6f99ab7 nmdc:dobj-11-ax3nqq36 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rh26v94.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p9h7fy68.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fff62accdf55c847cfb8652e7e07662f -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-1rh26v94.1/nmdc_wfmgas-11-1rh26v94.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fff62accdf55c847cfb8652e7e07662f nmdc:dobj-11-h9b1kk44 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfmgas-11-p9h7fy68.1/nmdc_wfmgas-11-p9h7fy68.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fff62accdf55c847cfb8652e7e07662f nmdc:dobj-11-hwejt569 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rh26v94.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfmgas-11-1rh26v94.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p9h7fy68.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfmgas-11-p9h7fy68.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-a0bq3b03 -INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jtkcg873.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1 +INFO:root:New activity id created for nmdc:omprc-11-a0bq3b03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kc19ah06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5687b844cbf0af67dec593bde42fc7d4 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5687b844cbf0af67dec593bde42fc7d4 nmdc:dobj-11-a9gsvg87 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5687b844cbf0af67dec593bde42fc7d4 nmdc:dobj-11-ymxtht24 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 nmdc:dobj-11-0p4kbj95 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f45f1079aa3bbd5b8151f1fc30d521f8 nmdc:dobj-11-g8pfyk42 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 nmdc:dobj-11-zfs8rg44 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a81d41b0c856bfa3a74f5b42a310ff5 nmdc:dobj-11-883w7679 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 nmdc:dobj-11-8g7kj571 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ec7d9e73eb5a73f4bfe8e6c3b4dcb64 nmdc:dobj-11-5yhe3278 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a9addb084ba81228780189c80a5e476b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9addb084ba81228780189c80a5e476b nmdc:dobj-11-6htxx831 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9addb084ba81228780189c80a5e476b nmdc:dobj-11-ma75y412 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d09c43bc278b970afcd99c5b3ffbcc6e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d09c43bc278b970afcd99c5b3ffbcc6e nmdc:dobj-11-sq5wyh09 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d09c43bc278b970afcd99c5b3ffbcc6e nmdc:dobj-11-20xfgf90 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:884c00067757f3648d92db9366340b0d -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:884c00067757f3648d92db9366340b0d nmdc:dobj-11-w2szfn02 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:884c00067757f3648d92db9366340b0d nmdc:dobj-11-4hdksk27 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91ec7367b50f6379ec85b460dc5a1f68 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91ec7367b50f6379ec85b460dc5a1f68 nmdc:dobj-11-v0d18w45 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91ec7367b50f6379ec85b460dc5a1f68 nmdc:dobj-11-fqkxe966 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-jtkcg873.1/nmdc_wfrbt-11-jtkcg873.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 nmdc:dobj-11-f39tvn58 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a0bq3b03/nmdc:wfrbt-11-kc19ah06.1/nmdc_wfrbt-11-kc19ah06.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c989493a5f8e0b3b4c7a5305d0ce2e2 nmdc:dobj-11-jnryfp93 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a0bq3b03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jtkcg873.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfrbt-11-jtkcg873.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kc19ah06.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2b17bcec6a8b634fd2c0f39fa53af922 nmdc:wfrbt-11-kc19ah06.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a0bq3b03 INFO:root:omics_processing_id: nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:796233a318facd24d5c14f44f479dc43 nmdc:dobj-11-fsp54314 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:796233a318facd24d5c14f44f479dc43 nmdc:dobj-11-akfsdh30 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a7b00s66 -INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8w1c5085.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-8w1c5085.1 +INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-06cb5316.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-06cb5316.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff3cd9483c04b1db219dead3372b780a -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-8w1c5085.1/nmdc_wfrqc-11-8w1c5085.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff3cd9483c04b1db219dead3372b780a nmdc:dobj-11-k04cg052 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-06cb5316.1/nmdc_wfrqc-11-06cb5316.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff3cd9483c04b1db219dead3372b780a nmdc:dobj-11-ewyjqq82 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8w1c5085.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-06cb5316.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e52aa0da41e13df52179487aafc60ed4 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-8w1c5085.1/nmdc_wfrqc-11-8w1c5085.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e52aa0da41e13df52179487aafc60ed4 nmdc:dobj-11-gf0a2149 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrqc-11-06cb5316.1/nmdc_wfrqc-11-06cb5316.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e52aa0da41e13df52179487aafc60ed4 nmdc:dobj-11-dmxdqa45 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8w1c5085.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfrqc-11-8w1c5085.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-06cb5316.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfrqc-11-06cb5316.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-a7b00s66 -INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bwwxwn28.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-bwwxwn28.1 +INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-fd834q29.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:431a14b1d40aea16ab1597bfc3203611 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-bwwxwn28.1/nmdc_wfmgas-11-bwwxwn28.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:431a14b1d40aea16ab1597bfc3203611 nmdc:dobj-11-q8vxy471 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:431a14b1d40aea16ab1597bfc3203611 nmdc:dobj-11-40ytw371 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bwwxwn28.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ecbb1a27c05366241dc5d12db878c37 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-bwwxwn28.1/nmdc_wfmgas-11-bwwxwn28.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ecbb1a27c05366241dc5d12db878c37 nmdc:dobj-11-xj71sc56 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ecbb1a27c05366241dc5d12db878c37 nmdc:dobj-11-jy8pby44 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bwwxwn28.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:265810b4500a552b57966668fcc61562 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-bwwxwn28.1/nmdc_wfmgas-11-bwwxwn28.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265810b4500a552b57966668fcc61562 nmdc:dobj-11-tvdszj83 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265810b4500a552b57966668fcc61562 nmdc:dobj-11-mqdyma98 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bwwxwn28.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:97d82d36c70bcfc40201e7a9f12a67a3 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-bwwxwn28.1/nmdc_wfmgas-11-bwwxwn28.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97d82d36c70bcfc40201e7a9f12a67a3 nmdc:dobj-11-c3vn5r45 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97d82d36c70bcfc40201e7a9f12a67a3 nmdc:dobj-11-y3eb6h26 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bwwxwn28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f028a927e1fb1b8f71f9f541581db53 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-bwwxwn28.1/nmdc_wfmgas-11-bwwxwn28.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f028a927e1fb1b8f71f9f541581db53 nmdc:dobj-11-wtdg5t66 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfmgas-11-fd834q29.1/nmdc_wfmgas-11-fd834q29.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f028a927e1fb1b8f71f9f541581db53 nmdc:dobj-11-gb07bc98 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bwwxwn28.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfmgas-11-bwwxwn28.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fd834q29.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfmgas-11-fd834q29.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-a7b00s66 -INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-mc11dz08.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1 +INFO:root:New activity id created for nmdc:omprc-11-a7b00s66 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-zq6wr629.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1f3018fde1a7a7639dd85ee9642c1ea -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1f3018fde1a7a7639dd85ee9642c1ea nmdc:dobj-11-yceqgc79 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1f3018fde1a7a7639dd85ee9642c1ea nmdc:dobj-11-nne39e83 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90994cf49b3e84e51d7b313fd6c031a0 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90994cf49b3e84e51d7b313fd6c031a0 nmdc:dobj-11-sga22p15 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90994cf49b3e84e51d7b313fd6c031a0 nmdc:dobj-11-0wen5v73 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8494637a042ecd6b5470702eb662893a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8494637a042ecd6b5470702eb662893a nmdc:dobj-11-1gakgc71 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8494637a042ecd6b5470702eb662893a nmdc:dobj-11-4c759s87 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c612e3e540471677da18cd7091985ff6 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c612e3e540471677da18cd7091985ff6 nmdc:dobj-11-xfzw5j98 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c612e3e540471677da18cd7091985ff6 nmdc:dobj-11-5wnkfw36 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88e0926f84e091144f8df2c592b89e39 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88e0926f84e091144f8df2c592b89e39 nmdc:dobj-11-avjrhw84 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88e0926f84e091144f8df2c592b89e39 nmdc:dobj-11-1zb19d45 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e062b1c8dd01341c6619c148562623f6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e062b1c8dd01341c6619c148562623f6 nmdc:dobj-11-6fmw0676 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e062b1c8dd01341c6619c148562623f6 nmdc:dobj-11-am9nhy10 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d488dc15a9c0d8ce0b9edddc454b1476 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d488dc15a9c0d8ce0b9edddc454b1476 nmdc:dobj-11-4jjppx51 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d488dc15a9c0d8ce0b9edddc454b1476 nmdc:dobj-11-xzfr7911 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b45157104eaa7e0662df1d80bbde27d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b45157104eaa7e0662df1d80bbde27d nmdc:dobj-11-18rp4y31 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b45157104eaa7e0662df1d80bbde27d nmdc:dobj-11-e375r205 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:afe3dda5cc6792097f63a436e2786dc3 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-mc11dz08.1/nmdc_wfrbt-11-mc11dz08.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afe3dda5cc6792097f63a436e2786dc3 nmdc:dobj-11-1znhph31 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a7b00s66/nmdc:wfrbt-11-zq6wr629.1/nmdc_wfrbt-11-zq6wr629.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afe3dda5cc6792097f63a436e2786dc3 nmdc:dobj-11-vq5zte25 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a7b00s66 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mc11dz08.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfrbt-11-mc11dz08.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zq6wr629.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4884c130f82a686985297b1990c9f531 nmdc:wfrbt-11-zq6wr629.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a7b00s66 INFO:root:omics_processing_id: nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f31a2a473fa6cc081ff6c136d79c454a nmdc:dobj-11-faq0tn49 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f31a2a473fa6cc081ff6c136d79c454a nmdc:dobj-11-1baab583 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-sqz66z61 -INFO:root:New activity id created for nmdc:omprc-11-sqz66z61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sdfdd574.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrqc-11-sdfdd574.1 +INFO:root:New activity id created for nmdc:omprc-11-sqz66z61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2cfcgk77.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrqc-11-2cfcgk77.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6466fb06869fd45a23d98d3fbe6e476c -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrqc-11-sdfdd574.1/nmdc_wfrqc-11-sdfdd574.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6466fb06869fd45a23d98d3fbe6e476c nmdc:dobj-11-rt284p76 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrqc-11-2cfcgk77.1/nmdc_wfrqc-11-2cfcgk77.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6466fb06869fd45a23d98d3fbe6e476c nmdc:dobj-11-2v2ews36 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sdfdd574.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2cfcgk77.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98833e75c0ec5a63b72fedf9cf7e02ee -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrqc-11-sdfdd574.1/nmdc_wfrqc-11-sdfdd574.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98833e75c0ec5a63b72fedf9cf7e02ee nmdc:dobj-11-kpy36m23 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrqc-11-2cfcgk77.1/nmdc_wfrqc-11-2cfcgk77.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98833e75c0ec5a63b72fedf9cf7e02ee nmdc:dobj-11-9jbtkv28 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sdfdd574.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfrqc-11-sdfdd574.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2cfcgk77.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfrqc-11-2cfcgk77.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-sqz66z61 -INFO:root:New activity id created for nmdc:omprc-11-sqz66z61 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5cjsfv66.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-5cjsfv66.1 +INFO:root:New activity id created for nmdc:omprc-11-sqz66z61 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xp7k7675.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a065964a2e48b46a460abe4a05dd8049 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-5cjsfv66.1/nmdc_wfmgas-11-5cjsfv66.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a065964a2e48b46a460abe4a05dd8049 nmdc:dobj-11-ek04n280 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a065964a2e48b46a460abe4a05dd8049 nmdc:dobj-11-qgvk9f38 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5cjsfv66.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c66cc438d8fc6f160328734db1b44e4d -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-5cjsfv66.1/nmdc_wfmgas-11-5cjsfv66.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c66cc438d8fc6f160328734db1b44e4d nmdc:dobj-11-0qg4av23 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c66cc438d8fc6f160328734db1b44e4d nmdc:dobj-11-d2b7pb74 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5cjsfv66.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53c302c537e38b9c59a2ae62ea5f69a9 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-5cjsfv66.1/nmdc_wfmgas-11-5cjsfv66.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53c302c537e38b9c59a2ae62ea5f69a9 nmdc:dobj-11-1zd1v016 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53c302c537e38b9c59a2ae62ea5f69a9 nmdc:dobj-11-dyfgy891 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5cjsfv66.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75e4dbac293b74268199cf4dd725ad04 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-5cjsfv66.1/nmdc_wfmgas-11-5cjsfv66.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75e4dbac293b74268199cf4dd725ad04 nmdc:dobj-11-sz251b23 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75e4dbac293b74268199cf4dd725ad04 nmdc:dobj-11-37aat294 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5cjsfv66.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e9ba8eb0aafe70178dd33185777e9f2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-5cjsfv66.1/nmdc_wfmgas-11-5cjsfv66.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e9ba8eb0aafe70178dd33185777e9f2 nmdc:dobj-11-8nma3d65 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfmgas-11-xp7k7675.1/nmdc_wfmgas-11-xp7k7675.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e9ba8eb0aafe70178dd33185777e9f2 nmdc:dobj-11-xqk0nm69 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5cjsfv66.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfmgas-11-5cjsfv66.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xp7k7675.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfmgas-11-xp7k7675.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-sqz66z61 -INFO:root:New activity id created for nmdc:omprc-11-sqz66z61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-357z4e97.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1 +INFO:root:New activity id created for nmdc:omprc-11-sqz66z61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ckmeya95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b983789d4379b8ad7c2712f396e3a603 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b983789d4379b8ad7c2712f396e3a603 nmdc:dobj-11-rdeybc50 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b983789d4379b8ad7c2712f396e3a603 nmdc:dobj-11-3tzphh52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:49112ae784f64075efdda656c18bd8ce -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49112ae784f64075efdda656c18bd8ce nmdc:dobj-11-d5bd1b94 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49112ae784f64075efdda656c18bd8ce nmdc:dobj-11-k6f2yb05 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cadb9ca59af1220df291b1982786e205 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cadb9ca59af1220df291b1982786e205 nmdc:dobj-11-a7ybmz88 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cadb9ca59af1220df291b1982786e205 nmdc:dobj-11-gnveac47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:856a6c981be6986702dc534a6e386667 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:856a6c981be6986702dc534a6e386667 nmdc:dobj-11-kaed9g98 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:856a6c981be6986702dc534a6e386667 nmdc:dobj-11-h38x2053 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb18ee2cb8a08864dfca05d07865cdc2 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb18ee2cb8a08864dfca05d07865cdc2 nmdc:dobj-11-h52sb932 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb18ee2cb8a08864dfca05d07865cdc2 nmdc:dobj-11-w831jc07 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 nmdc:dobj-11-x7aeqf45 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f38ad8399ab7aab0cbfe4b2d60298fe7 nmdc:dobj-11-gb0bpk22 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 nmdc:dobj-11-7be9rk80 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c6dab2257679d340c0f6ecfdc8f1c70 nmdc:dobj-11-k08zfs24 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:38ccb457d30f57b11d2b94abb2b99179 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ccb457d30f57b11d2b94abb2b99179 nmdc:dobj-11-5hr2sh89 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:38ccb457d30f57b11d2b94abb2b99179 nmdc:dobj-11-8erwe160 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-357z4e97.1/nmdc_wfrbt-11-357z4e97.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 nmdc:dobj-11-119sj323 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sqz66z61/nmdc:wfrbt-11-ckmeya95.1/nmdc_wfrbt-11-ckmeya95.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b9604cb2cbd29411bf3c1a8d5112c18 nmdc:dobj-11-g2mysp23 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-sqz66z61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-357z4e97.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfrbt-11-357z4e97.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ckmeya95.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b15cfb0ec538574529b41dbb7b825976 nmdc:wfrbt-11-ckmeya95.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-sqz66z61 INFO:root:omics_processing_id: nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86cb807a667b81fabb252a75eb79022c nmdc:dobj-11-8aaa1a21 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86cb807a667b81fabb252a75eb79022c nmdc:dobj-11-hcw73462 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-prjs5x33 -INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4n7z2g98.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-4n7z2g98.1 +INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-121db840.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-121db840.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:64f78bbabad2f9d5ba81ba08d72548d4 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-4n7z2g98.1/nmdc_wfrqc-11-4n7z2g98.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64f78bbabad2f9d5ba81ba08d72548d4 nmdc:dobj-11-m1a6qr10 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-121db840.1/nmdc_wfrqc-11-121db840.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64f78bbabad2f9d5ba81ba08d72548d4 nmdc:dobj-11-jsyvnx40 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4n7z2g98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-121db840.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:265f2da99dea8d10bf78c9c840b101c5 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-4n7z2g98.1/nmdc_wfrqc-11-4n7z2g98.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265f2da99dea8d10bf78c9c840b101c5 nmdc:dobj-11-cy295419 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrqc-11-121db840.1/nmdc_wfrqc-11-121db840.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265f2da99dea8d10bf78c9c840b101c5 nmdc:dobj-11-fkmyrv83 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4n7z2g98.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfrqc-11-4n7z2g98.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-121db840.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfrqc-11-121db840.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-prjs5x33 -INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-09dbc129.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-09dbc129.1 +INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bs3rhh28.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a23021719050b58ba81e789c30b9c5c2 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-09dbc129.1/nmdc_wfmgas-11-09dbc129.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a23021719050b58ba81e789c30b9c5c2 nmdc:dobj-11-ec4dxb12 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a23021719050b58ba81e789c30b9c5c2 nmdc:dobj-11-f197at36 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-09dbc129.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df3d11a581736d44c9e90d559c9379d9 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-09dbc129.1/nmdc_wfmgas-11-09dbc129.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df3d11a581736d44c9e90d559c9379d9 nmdc:dobj-11-nr48pq23 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Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5d55d570572552f4d613813073ede4c nmdc:dobj-11-4gz3eg18 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-09dbc129.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37c66cf049a5cee03b98856ab11236c1 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-09dbc129.1/nmdc_wfmgas-11-09dbc129.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37c66cf049a5cee03b98856ab11236c1 nmdc:dobj-11-gdmrpv03 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37c66cf049a5cee03b98856ab11236c1 nmdc:dobj-11-dkzzqe56 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-09dbc129.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:54289b50c6b631a097a827578534adf3 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-09dbc129.1/nmdc_wfmgas-11-09dbc129.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54289b50c6b631a097a827578534adf3 nmdc:dobj-11-wdzkp881 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfmgas-11-bs3rhh28.1/nmdc_wfmgas-11-bs3rhh28.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54289b50c6b631a097a827578534adf3 nmdc:dobj-11-6v0ea009 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-09dbc129.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfmgas-11-09dbc129.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bs3rhh28.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfmgas-11-bs3rhh28.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-prjs5x33 -INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-fd9bfw44.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1 +INFO:root:New activity id created for nmdc:omprc-11-prjs5x33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-hjs6xb56.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f614cde2154a1906f1ff5059c69b8f2 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f614cde2154a1906f1ff5059c69b8f2 nmdc:dobj-11-cgqjew78 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f614cde2154a1906f1ff5059c69b8f2 nmdc:dobj-11-nwe28c27 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b5b740ccf227209b54a7ceb6c860cfb -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b5b740ccf227209b54a7ceb6c860cfb nmdc:dobj-11-b1xfs180 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b5b740ccf227209b54a7ceb6c860cfb nmdc:dobj-11-kabn0x47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e94829532f3107d64349e53f82828a89 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e94829532f3107d64349e53f82828a89 nmdc:dobj-11-zjbnwx03 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e94829532f3107d64349e53f82828a89 nmdc:dobj-11-kbyky623 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6dde7b5c1e2cb869a10cb03312110709 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6dde7b5c1e2cb869a10cb03312110709 nmdc:dobj-11-3qzbzd71 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6dde7b5c1e2cb869a10cb03312110709 nmdc:dobj-11-qcjr8a89 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e5b88644c0e4b1953eae268202823e6 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e5b88644c0e4b1953eae268202823e6 nmdc:dobj-11-2zsqyp50 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e5b88644c0e4b1953eae268202823e6 nmdc:dobj-11-48csmh37 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb644ed38eaf40f3d421cf555968f623 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb644ed38eaf40f3d421cf555968f623 nmdc:dobj-11-sc7y5987 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb644ed38eaf40f3d421cf555968f623 nmdc:dobj-11-7qr71277 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8296f03d176afd095c8fa98f4c2f9662 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8296f03d176afd095c8fa98f4c2f9662 nmdc:dobj-11-7d8crw80 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8296f03d176afd095c8fa98f4c2f9662 nmdc:dobj-11-rjzetf81 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:658d593dbf5f8104188df08dc35153d1 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:658d593dbf5f8104188df08dc35153d1 nmdc:dobj-11-561tz549 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:658d593dbf5f8104188df08dc35153d1 nmdc:dobj-11-gyf2pm05 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8492f8378ebb1740e86c75d0612d6e2c -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-fd9bfw44.1/nmdc_wfrbt-11-fd9bfw44.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8492f8378ebb1740e86c75d0612d6e2c nmdc:dobj-11-n0ftvt69 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-prjs5x33/nmdc:wfrbt-11-hjs6xb56.1/nmdc_wfrbt-11-hjs6xb56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8492f8378ebb1740e86c75d0612d6e2c nmdc:dobj-11-trcgnw46 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-prjs5x33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fd9bfw44.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfrbt-11-fd9bfw44.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hjs6xb56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a38b8d297a30b95d74235694302a7853 nmdc:wfrbt-11-hjs6xb56.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-prjs5x33 INFO:root:omics_processing_id: nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20f714c290eeba8f76fe33ea21bf2291 nmdc:dobj-11-76wmee22 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20f714c290eeba8f76fe33ea21bf2291 nmdc:dobj-11-06c7dp33 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-y08fp921 -INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qzpek169.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-qzpek169.1 +INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-30aj2e28.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-30aj2e28.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f8ceed0240176014970c77f79f236ea3 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-qzpek169.1/nmdc_wfrqc-11-qzpek169.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8ceed0240176014970c77f79f236ea3 nmdc:dobj-11-kg2ftx63 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-30aj2e28.1/nmdc_wfrqc-11-30aj2e28.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8ceed0240176014970c77f79f236ea3 nmdc:dobj-11-4m33z536 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qzpek169.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-30aj2e28.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74b88ee74fbbbe184664ce624dee82e7 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-qzpek169.1/nmdc_wfrqc-11-qzpek169.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74b88ee74fbbbe184664ce624dee82e7 nmdc:dobj-11-pbxh1d67 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrqc-11-30aj2e28.1/nmdc_wfrqc-11-30aj2e28.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74b88ee74fbbbe184664ce624dee82e7 nmdc:dobj-11-h30n9e09 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qzpek169.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfrqc-11-qzpek169.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-30aj2e28.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfrqc-11-30aj2e28.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-y08fp921 -INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ghwfk153.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-ghwfk153.1 +INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0jxnzn40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12d98e676b4d3155b2feec02a2cf8821 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-ghwfk153.1/nmdc_wfmgas-11-ghwfk153.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12d98e676b4d3155b2feec02a2cf8821 nmdc:dobj-11-qb3bdf35 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12d98e676b4d3155b2feec02a2cf8821 nmdc:dobj-11-nszha159 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ghwfk153.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa905d7c7838b5e43e15940dc5db2100 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-ghwfk153.1/nmdc_wfmgas-11-ghwfk153.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa905d7c7838b5e43e15940dc5db2100 nmdc:dobj-11-tzpayv86 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa905d7c7838b5e43e15940dc5db2100 nmdc:dobj-11-crrawb88 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ghwfk153.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e049958d5490dbe3228712803d73095a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-ghwfk153.1/nmdc_wfmgas-11-ghwfk153.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e049958d5490dbe3228712803d73095a nmdc:dobj-11-5bbjn345 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e049958d5490dbe3228712803d73095a nmdc:dobj-11-hmr7dq43 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ghwfk153.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:088807ac3d09db863fbf4d936fadad06 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-ghwfk153.1/nmdc_wfmgas-11-ghwfk153.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:088807ac3d09db863fbf4d936fadad06 nmdc:dobj-11-q0e7tr06 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:088807ac3d09db863fbf4d936fadad06 nmdc:dobj-11-03zy1w73 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ghwfk153.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c8eb256434693a67f66d81eb6fb926e -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-ghwfk153.1/nmdc_wfmgas-11-ghwfk153.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c8eb256434693a67f66d81eb6fb926e nmdc:dobj-11-va1y1n62 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfmgas-11-0jxnzn40.1/nmdc_wfmgas-11-0jxnzn40.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c8eb256434693a67f66d81eb6fb926e nmdc:dobj-11-92dxct31 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ghwfk153.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfmgas-11-ghwfk153.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0jxnzn40.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfmgas-11-0jxnzn40.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-y08fp921 -INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-scbsys23.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1 +INFO:root:New activity id created for nmdc:omprc-11-y08fp921 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-bqn7xn07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:faded304d5420687e5031b4fe13a41ba -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faded304d5420687e5031b4fe13a41ba nmdc:dobj-11-p04m6316 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faded304d5420687e5031b4fe13a41ba nmdc:dobj-11-tadrn207 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2862a776261adad85107834fd8758312 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2862a776261adad85107834fd8758312 nmdc:dobj-11-5r1rn927 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2862a776261adad85107834fd8758312 nmdc:dobj-11-n9s0g749 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f29a30f9357988e214b88cd10a52701 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f29a30f9357988e214b88cd10a52701 nmdc:dobj-11-fxgr4w54 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f29a30f9357988e214b88cd10a52701 nmdc:dobj-11-gewzd131 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ffbd2cae06ea7b62b2d529960325ba9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ffbd2cae06ea7b62b2d529960325ba9 nmdc:dobj-11-vrhvj561 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ffbd2cae06ea7b62b2d529960325ba9 nmdc:dobj-11-m8az4h07 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:04d59bf20f0ff4407ad1165408e38c7e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04d59bf20f0ff4407ad1165408e38c7e nmdc:dobj-11-147qh484 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04d59bf20f0ff4407ad1165408e38c7e nmdc:dobj-11-k5r0jy85 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 nmdc:dobj-11-vaewss33 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f23dc57fd64c05a308fd4ddc0a2dae14 nmdc:dobj-11-6y9w0782 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe403d58f13800b56e638d59ba96bf1b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe403d58f13800b56e638d59ba96bf1b nmdc:dobj-11-tfcbpc97 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe403d58f13800b56e638d59ba96bf1b nmdc:dobj-11-aq1z7k61 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:551120d522b4a7a27545e1ff1236eb1e -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:551120d522b4a7a27545e1ff1236eb1e nmdc:dobj-11-vydnqw63 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:551120d522b4a7a27545e1ff1236eb1e nmdc:dobj-11-a6m4ex21 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e589a42f0014167292de74fb1f58ce8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-scbsys23.1/nmdc_wfrbt-11-scbsys23.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e589a42f0014167292de74fb1f58ce8 nmdc:dobj-11-3aae6057 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-y08fp921/nmdc:wfrbt-11-bqn7xn07.1/nmdc_wfrbt-11-bqn7xn07.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e589a42f0014167292de74fb1f58ce8 nmdc:dobj-11-8tssnr31 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-y08fp921 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scbsys23.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfrbt-11-scbsys23.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bqn7xn07.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:152a13c8451e2bab601eae39f1bb0233 nmdc:wfrbt-11-bqn7xn07.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-y08fp921 INFO:root:omics_processing_id: nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6d907e2b41d013afcb2b6aa81c1be87 nmdc:dobj-11-qrrcpz55 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6d907e2b41d013afcb2b6aa81c1be87 nmdc:dobj-11-jqmpx247 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ysp4vq35 -INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ws8gmb68.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-ws8gmb68.1 +INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4vp7m389.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-4vp7m389.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b275b2fb125c7fc8d77bba7698f2311 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-ws8gmb68.1/nmdc_wfrqc-11-ws8gmb68.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b275b2fb125c7fc8d77bba7698f2311 nmdc:dobj-11-tm5frt08 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-4vp7m389.1/nmdc_wfrqc-11-4vp7m389.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b275b2fb125c7fc8d77bba7698f2311 nmdc:dobj-11-epq3h365 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ws8gmb68.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4vp7m389.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b9b7f56b823fac39c7f82cc0355ec0c -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-ws8gmb68.1/nmdc_wfrqc-11-ws8gmb68.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b9b7f56b823fac39c7f82cc0355ec0c nmdc:dobj-11-rex3km59 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrqc-11-4vp7m389.1/nmdc_wfrqc-11-4vp7m389.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b9b7f56b823fac39c7f82cc0355ec0c nmdc:dobj-11-nkxvg873 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ws8gmb68.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfrqc-11-ws8gmb68.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4vp7m389.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfrqc-11-4vp7m389.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ysp4vq35 -INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-avst9b84.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-avst9b84.1 +INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2tzte028.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:097282771962a8077194e4bd2e0e0f3b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-avst9b84.1/nmdc_wfmgas-11-avst9b84.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:097282771962a8077194e4bd2e0e0f3b nmdc:dobj-11-fd160x16 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:097282771962a8077194e4bd2e0e0f3b nmdc:dobj-11-vw6e6x59 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-avst9b84.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bdbaf92a5028414ae5e6dac2fb3314a8 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-avst9b84.1/nmdc_wfmgas-11-avst9b84.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdbaf92a5028414ae5e6dac2fb3314a8 nmdc:dobj-11-0fjdwj26 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdbaf92a5028414ae5e6dac2fb3314a8 nmdc:dobj-11-3arnhy85 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-avst9b84.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbba44c97ee3c4de49c91d8609db8a51 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-avst9b84.1/nmdc_wfmgas-11-avst9b84.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbba44c97ee3c4de49c91d8609db8a51 nmdc:dobj-11-b1406s02 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbba44c97ee3c4de49c91d8609db8a51 nmdc:dobj-11-vwtgbd92 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-avst9b84.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f8aea25dcd7f29578c046109b9725092 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-avst9b84.1/nmdc_wfmgas-11-avst9b84.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8aea25dcd7f29578c046109b9725092 nmdc:dobj-11-mhhjqj17 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8aea25dcd7f29578c046109b9725092 nmdc:dobj-11-hg65w327 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-avst9b84.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f05dd0954ff8fbee6eb09b1aa794355 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-avst9b84.1/nmdc_wfmgas-11-avst9b84.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f05dd0954ff8fbee6eb09b1aa794355 nmdc:dobj-11-01j7sq68 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfmgas-11-2tzte028.1/nmdc_wfmgas-11-2tzte028.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f05dd0954ff8fbee6eb09b1aa794355 nmdc:dobj-11-0c0h6r69 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-avst9b84.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfmgas-11-avst9b84.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2tzte028.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfmgas-11-2tzte028.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ysp4vq35 -INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-f165rj42.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1 +INFO:root:New activity id created for nmdc:omprc-11-ysp4vq35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-rp50cs53.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:756e0ac2425eda82f589d56a14e67c34 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:756e0ac2425eda82f589d56a14e67c34 nmdc:dobj-11-8776h704 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:756e0ac2425eda82f589d56a14e67c34 nmdc:dobj-11-nhvy1g58 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 nmdc:dobj-11-vprw2x31 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbc20bbf272cbd7f3fc40567a956c0d0 nmdc:dobj-11-qy82qf73 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3c7e366671c3d922125c2b82dde5f9b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3c7e366671c3d922125c2b82dde5f9b nmdc:dobj-11-5gj05w54 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3c7e366671c3d922125c2b82dde5f9b nmdc:dobj-11-84mrwe65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7f2baf22b5f33bfda016c580f279bcb9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f2baf22b5f33bfda016c580f279bcb9 nmdc:dobj-11-hah4nw33 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f2baf22b5f33bfda016c580f279bcb9 nmdc:dobj-11-vydvxb21 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98228a7d2cc38ae730f6442175da7fbc -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98228a7d2cc38ae730f6442175da7fbc nmdc:dobj-11-m13d0p33 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98228a7d2cc38ae730f6442175da7fbc nmdc:dobj-11-pc38h352 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f46be59cb522b317b9bf738237940f0b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f46be59cb522b317b9bf738237940f0b nmdc:dobj-11-vdfjtg32 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f46be59cb522b317b9bf738237940f0b nmdc:dobj-11-xhp2cd27 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f1e7e173ce2a3730d05788c36ecc2350 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1e7e173ce2a3730d05788c36ecc2350 nmdc:dobj-11-m7zbrt27 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1e7e173ce2a3730d05788c36ecc2350 nmdc:dobj-11-gwr6hv47 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b333856a7fa9bddb2e5b743bd8127c8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b333856a7fa9bddb2e5b743bd8127c8 nmdc:dobj-11-pzarbc82 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b333856a7fa9bddb2e5b743bd8127c8 nmdc:dobj-11-pbm8jf80 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2cab8bac20d35efc96806221abbf69d -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-f165rj42.1/nmdc_wfrbt-11-f165rj42.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2cab8bac20d35efc96806221abbf69d nmdc:dobj-11-m1488583 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ysp4vq35/nmdc:wfrbt-11-rp50cs53.1/nmdc_wfrbt-11-rp50cs53.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2cab8bac20d35efc96806221abbf69d nmdc:dobj-11-bj92vt48 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ysp4vq35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f165rj42.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfrbt-11-f165rj42.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rp50cs53.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a357ab1b78b8cb80f9152a72635e5945 nmdc:wfrbt-11-rp50cs53.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ysp4vq35 INFO:root:omics_processing_id: nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c52cdaa42622674591c66ceeb0c33758 nmdc:dobj-11-e5wven91 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c52cdaa42622674591c66ceeb0c33758 nmdc:dobj-11-hk38f582 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-rxv6kd89 -INFO:root:New activity id created for nmdc:omprc-11-rxv6kd89 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dsy43g71.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrqc-11-dsy43g71.1 +INFO:root:New activity id created for nmdc:omprc-11-rxv6kd89 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-h1fjgz36.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrqc-11-h1fjgz36.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e93348ff891c69dff4a3775c0e22fa4d -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrqc-11-dsy43g71.1/nmdc_wfrqc-11-dsy43g71.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e93348ff891c69dff4a3775c0e22fa4d nmdc:dobj-11-07jvvc53 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrqc-11-h1fjgz36.1/nmdc_wfrqc-11-h1fjgz36.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e93348ff891c69dff4a3775c0e22fa4d nmdc:dobj-11-qpgz0g96 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dsy43g71.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h1fjgz36.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6bb6387d05cfca32b35d82c709278cf1 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrqc-11-dsy43g71.1/nmdc_wfrqc-11-dsy43g71.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6bb6387d05cfca32b35d82c709278cf1 nmdc:dobj-11-dtgjnp36 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrqc-11-h1fjgz36.1/nmdc_wfrqc-11-h1fjgz36.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6bb6387d05cfca32b35d82c709278cf1 nmdc:dobj-11-phttnt66 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dsy43g71.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfrqc-11-dsy43g71.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h1fjgz36.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfrqc-11-h1fjgz36.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-rxv6kd89 -INFO:root:New activity id created for nmdc:omprc-11-rxv6kd89 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yj0xt035.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-yj0xt035.1 +INFO:root:New activity id created for nmdc:omprc-11-rxv6kd89 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-y16kdh87.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0a519bd52b6c04196e219cea28b9828d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-yj0xt035.1/nmdc_wfmgas-11-yj0xt035.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a519bd52b6c04196e219cea28b9828d nmdc:dobj-11-ghxhaw81 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a519bd52b6c04196e219cea28b9828d nmdc:dobj-11-1v5p6c77 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yj0xt035.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-yj0xt035.1/nmdc_wfmgas-11-yj0xt035.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 nmdc:dobj-11-ddda6582 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:168a998b28dcb4bdbdf1bd8fe0d97f56 nmdc:dobj-11-8ze4x889 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yj0xt035.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90fe74a9b0acce7f2a60bcaad8181b37 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-yj0xt035.1/nmdc_wfmgas-11-yj0xt035.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90fe74a9b0acce7f2a60bcaad8181b37 nmdc:dobj-11-xteq8431 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90fe74a9b0acce7f2a60bcaad8181b37 nmdc:dobj-11-56mbsb86 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yj0xt035.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4768cfee3cc465d50b6df29f0996ca96 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-yj0xt035.1/nmdc_wfmgas-11-yj0xt035.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4768cfee3cc465d50b6df29f0996ca96 nmdc:dobj-11-be3xcd05 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4768cfee3cc465d50b6df29f0996ca96 nmdc:dobj-11-37cd6h39 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yj0xt035.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66485d8a5a362830e8c6de5e82b6da28 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-yj0xt035.1/nmdc_wfmgas-11-yj0xt035.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66485d8a5a362830e8c6de5e82b6da28 nmdc:dobj-11-vbsqss61 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfmgas-11-y16kdh87.1/nmdc_wfmgas-11-y16kdh87.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66485d8a5a362830e8c6de5e82b6da28 nmdc:dobj-11-h6hnkn86 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yj0xt035.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfmgas-11-yj0xt035.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y16kdh87.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfmgas-11-y16kdh87.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-rxv6kd89 -INFO:root:New activity id created for nmdc:omprc-11-rxv6kd89 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-whxj3h17.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1 +INFO:root:New activity id created for nmdc:omprc-11-rxv6kd89 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-t3e4tt62.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:079810154a4bc3cf9081189e81143815 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:079810154a4bc3cf9081189e81143815 nmdc:dobj-11-9svx2635 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:079810154a4bc3cf9081189e81143815 nmdc:dobj-11-0c8bca66 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff7c0af07a528819c97a37da0336d16f -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff7c0af07a528819c97a37da0336d16f nmdc:dobj-11-e4v7c737 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff7c0af07a528819c97a37da0336d16f nmdc:dobj-11-rs797950 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44ae37842fd4075371a1503fd2540e5a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ae37842fd4075371a1503fd2540e5a nmdc:dobj-11-q7vdwm12 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ae37842fd4075371a1503fd2540e5a nmdc:dobj-11-xxqshm03 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 nmdc:dobj-11-rkpmbc54 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86ca2c1ceb82da7570932ef7b1f1ceb5 nmdc:dobj-11-wavyqz09 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7efb1644b8ac67406ac2bb3c9206518c -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7efb1644b8ac67406ac2bb3c9206518c nmdc:dobj-11-fnc8a239 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7efb1644b8ac67406ac2bb3c9206518c nmdc:dobj-11-138kg912 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a867326eda4ad18701c2c2326295cc75 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a867326eda4ad18701c2c2326295cc75 nmdc:dobj-11-ecp7kf91 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a867326eda4ad18701c2c2326295cc75 nmdc:dobj-11-j9ra4b79 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7dd0500dee529770c19006368cdbf843 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dd0500dee529770c19006368cdbf843 nmdc:dobj-11-kwpgkc33 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dd0500dee529770c19006368cdbf843 nmdc:dobj-11-ghpzmj94 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a10aad2d2f352298c72610a1556783ce -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a10aad2d2f352298c72610a1556783ce nmdc:dobj-11-ddwsmn77 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a10aad2d2f352298c72610a1556783ce nmdc:dobj-11-hg9xxs19 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66940e094d2be736538bf752d6e626c4 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-whxj3h17.1/nmdc_wfrbt-11-whxj3h17.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66940e094d2be736538bf752d6e626c4 nmdc:dobj-11-7rbqzk42 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rxv6kd89/nmdc:wfrbt-11-t3e4tt62.1/nmdc_wfrbt-11-t3e4tt62.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66940e094d2be736538bf752d6e626c4 nmdc:dobj-11-6kfgpa39 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-rxv6kd89 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-whxj3h17.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfrbt-11-whxj3h17.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t3e4tt62.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1cecb298d4e3892d33e60d5d3d71b029 nmdc:wfrbt-11-t3e4tt62.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-rxv6kd89 INFO:root:omics_processing_id: nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f503435c01cf49ed7805ce4c2d26d46 nmdc:dobj-11-7n6r1k22 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f503435c01cf49ed7805ce4c2d26d46 nmdc:dobj-11-ct7m6f02 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0jzfnf61 -INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-d4r5qv47.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-d4r5qv47.1 +INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vcwpt249.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-vcwpt249.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e79327783fe58785d9a0238c3ab7165 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-d4r5qv47.1/nmdc_wfrqc-11-d4r5qv47.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e79327783fe58785d9a0238c3ab7165 nmdc:dobj-11-24bd2s05 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-vcwpt249.1/nmdc_wfrqc-11-vcwpt249.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e79327783fe58785d9a0238c3ab7165 nmdc:dobj-11-nc3fvv14 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d4r5qv47.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcwpt249.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6fe56b7ad72e0db84e769adf573936c9 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-d4r5qv47.1/nmdc_wfrqc-11-d4r5qv47.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fe56b7ad72e0db84e769adf573936c9 nmdc:dobj-11-6d9jf104 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrqc-11-vcwpt249.1/nmdc_wfrqc-11-vcwpt249.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fe56b7ad72e0db84e769adf573936c9 nmdc:dobj-11-ecnkbn07 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d4r5qv47.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfrqc-11-d4r5qv47.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcwpt249.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfrqc-11-vcwpt249.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-0jzfnf61 -INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jrmt8f97.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-jrmt8f97.1 +INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7p29xy79.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82f7cca2b2cb17816eaf5076c2119064 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-jrmt8f97.1/nmdc_wfmgas-11-jrmt8f97.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82f7cca2b2cb17816eaf5076c2119064 nmdc:dobj-11-39d8zv86 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82f7cca2b2cb17816eaf5076c2119064 nmdc:dobj-11-12ejcf09 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrmt8f97.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-jrmt8f97.1/nmdc_wfmgas-11-jrmt8f97.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 nmdc:dobj-11-y7jrrz77 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbf87ff6fc0dce688ddfe0bcd2417724 nmdc:dobj-11-f8bxar49 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrmt8f97.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31fade0dbd18fdea0ff83bf51a220641 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-jrmt8f97.1/nmdc_wfmgas-11-jrmt8f97.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31fade0dbd18fdea0ff83bf51a220641 nmdc:dobj-11-9trpy841 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31fade0dbd18fdea0ff83bf51a220641 nmdc:dobj-11-11fb5y96 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrmt8f97.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9641980460af2b2b5b960022bfbe6ba5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-jrmt8f97.1/nmdc_wfmgas-11-jrmt8f97.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9641980460af2b2b5b960022bfbe6ba5 nmdc:dobj-11-8xqghd95 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-7p29xy79.1/nmdc_wfmgas-11-7p29xy79.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9641980460af2b2b5b960022bfbe6ba5 nmdc:dobj-11-wr5hxj41 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jrmt8f97.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7p29xy79.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb266f15afb6a5af6bd054e1ce131d27 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfmgas-11-jrmt8f97.1/nmdc_wfmgas-11-jrmt8f97.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb266f15afb6a5af6bd054e1ce131d27 nmdc:dobj-11-vk3qgx66 +INFO:root:New file path computed for Assembly Coverage BAM: 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nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2ds2qd13.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1 +INFO:root:New activity id created for nmdc:omprc-11-0jzfnf61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-pmvwpe70.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 nmdc:dobj-11-6pc04z06 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3f9b1fb4362125c8e1c5eefbe61fceb2 nmdc:dobj-11-688geb42 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8dfe0251b7531da70cde8e5a0d44686a -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dfe0251b7531da70cde8e5a0d44686a nmdc:dobj-11-hv1np171 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dfe0251b7531da70cde8e5a0d44686a nmdc:dobj-11-abvbgm77 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e06ae82ad46cf9579742536eb879c819 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e06ae82ad46cf9579742536eb879c819 nmdc:dobj-11-81a42216 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e06ae82ad46cf9579742536eb879c819 nmdc:dobj-11-4x33m848 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a62d3890a2dd25117f0a07c418adf8b -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a62d3890a2dd25117f0a07c418adf8b nmdc:dobj-11-0yq35t47 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a62d3890a2dd25117f0a07c418adf8b nmdc:dobj-11-erec4797 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:694174082a13290f789b435fea8bc451 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:694174082a13290f789b435fea8bc451 nmdc:dobj-11-87vvpp67 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:694174082a13290f789b435fea8bc451 nmdc:dobj-11-55zx2508 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed6b118f66f2ade75aaca5e27b73304a -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed6b118f66f2ade75aaca5e27b73304a nmdc:dobj-11-y5q4b308 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed6b118f66f2ade75aaca5e27b73304a nmdc:dobj-11-sm4mxt16 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f270aa128dd2057f3ef8ad0759e240ce -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f270aa128dd2057f3ef8ad0759e240ce nmdc:dobj-11-025dqz96 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f270aa128dd2057f3ef8ad0759e240ce nmdc:dobj-11-9dpsjs06 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:638a10778451ae6f17dcea786424731d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:638a10778451ae6f17dcea786424731d nmdc:dobj-11-m3reyv14 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:638a10778451ae6f17dcea786424731d nmdc:dobj-11-p94xkc31 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c282197ecceebb84a7f931fc2389f59 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-2ds2qd13.1/nmdc_wfrbt-11-2ds2qd13.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c282197ecceebb84a7f931fc2389f59 nmdc:dobj-11-qtp0v110 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0jzfnf61/nmdc:wfrbt-11-pmvwpe70.1/nmdc_wfrbt-11-pmvwpe70.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c282197ecceebb84a7f931fc2389f59 nmdc:dobj-11-jfyk2x42 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-0jzfnf61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2ds2qd13.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfrbt-11-2ds2qd13.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pmvwpe70.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6d185b460547056744dd8ca62fc30644 nmdc:wfrbt-11-pmvwpe70.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-0jzfnf61 +INFO:root:omics_processing_id: nmdc:omprc-11-qm563f05 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nmdc_wfrqc-11-rb6sjm59.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d426ff495a9885ec516546b9cd7e1d25 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfrqc-11-rb6sjm59.1/nmdc_wfrqc-11-rb6sjm59.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d426ff495a9885ec516546b9cd7e1d25 nmdc:dobj-11-efm2cs23 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-qm563f05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rb6sjm59.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0f21da30e01f45f336e29ebd9f9ebf90 nmdc:wfrqc-11-rb6sjm59.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-qm563f05 +INFO:root:New activity id created for nmdc:omprc-11-qm563f05 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6x4p1436.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d10910d29200afd36fbb483323f78910 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d10910d29200afd36fbb483323f78910 nmdc:dobj-11-38c9c629 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-qm563f05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3590b9c13f477435cb210006c9a088f7 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3590b9c13f477435cb210006c9a088f7 nmdc:dobj-11-evm7fa15 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-qm563f05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:435db0d40b74bc58f7012375f95a22dc +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:435db0d40b74bc58f7012375f95a22dc nmdc:dobj-11-2c219y50 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-qm563f05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f49b70f2b86bdf6ab8de63ae6af22f13 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f49b70f2b86bdf6ab8de63ae6af22f13 nmdc:dobj-11-3k183960 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-qm563f05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9fcb7512bd57f6854980c6305e72da6 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qm563f05/nmdc:wfmgas-11-6x4p1436.1/nmdc_wfmgas-11-6x4p1436.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9fcb7512bd57f6854980c6305e72da6 nmdc:dobj-11-q717xs51 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-qm563f05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6x4p1436.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0f21da30e01f45f336e29ebd9f9ebf90 nmdc:wfmgas-11-6x4p1436.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-qm563f05 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-qm563f05 INFO:root:omics_processing_id: nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0afe727fea9effca194d4b1f607984ff nmdc:dobj-11-nm7t1g57 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0afe727fea9effca194d4b1f607984ff nmdc:dobj-11-5m8czv49 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zvpsbf06 -INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qcwnb372.1 -INFO:root:Skipping directory creation for 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INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qcwnb372.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfrqc-11-qcwnb372.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rrzdt956.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfrqc-11-rrzdt956.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zvpsbf06 -INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5awb7q04.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-5awb7q04.1 +INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-sx8y0z55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sx8y0z55.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:243925579b9f4fb9ae43011ced963695 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-5awb7q04.1/nmdc_wfmgas-11-5awb7q04.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:243925579b9f4fb9ae43011ced963695 nmdc:dobj-11-mtsftc18 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfmgas-11-sx8y0z55.1/nmdc_wfmgas-11-sx8y0z55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:243925579b9f4fb9ae43011ced963695 nmdc:dobj-11-jev5yd11 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5awb7q04.1_contigs.fna 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nmdc:wfmgas-11-5awb7q04.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sx8y0z55.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfmgas-11-sx8y0z55.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-zvpsbf06 -INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-zc7j0p83.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1 +INFO:root:New activity id created for nmdc:omprc-11-zvpsbf06 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-nawwqp81.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21d2f0e1bd49b66eb71b6ce2599ee503 -INFO:root:New file path 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1/nmdc_wfrbt-11-zc7j0p83.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:854c197884c2ba55cb13d2b9eb3f4c8e nmdc:dobj-11-mh1x8y36 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:854c197884c2ba55cb13d2b9eb3f4c8e nmdc:dobj-11-6d1jmg17 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zc7j0p83.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd2fe7285199963f3a867971c9274343 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1/nmdc_wfrbt-11-zc7j0p83.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd2fe7285199963f3a867971c9274343 nmdc:dobj-11-t2n5a843 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd2fe7285199963f3a867971c9274343 nmdc:dobj-11-qe5seh47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zc7j0p83.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b99bfd06b67f44f2529e87d3f90327d -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1/nmdc_wfrbt-11-zc7j0p83.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b99bfd06b67f44f2529e87d3f90327d nmdc:dobj-11-hmj7xx08 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b99bfd06b67f44f2529e87d3f90327d nmdc:dobj-11-2prf3e93 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zc7j0p83.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:788e20bad88f057e08bb1a9ef55d1050 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1/nmdc_wfrbt-11-zc7j0p83.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:788e20bad88f057e08bb1a9ef55d1050 nmdc:dobj-11-0zntak04 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:788e20bad88f057e08bb1a9ef55d1050 nmdc:dobj-11-jf3awa28 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zc7j0p83.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eaa014c659b30a6c17fb6650d11ab769 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1/nmdc_wfrbt-11-zc7j0p83.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eaa014c659b30a6c17fb6650d11ab769 nmdc:dobj-11-5yzya486 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eaa014c659b30a6c17fb6650d11ab769 nmdc:dobj-11-p8404q43 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zc7j0p83.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6df14e79b47a45571745ac1d9577ff55 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1/nmdc_wfrbt-11-zc7j0p83.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6df14e79b47a45571745ac1d9577ff55 nmdc:dobj-11-ax1db505 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6df14e79b47a45571745ac1d9577ff55 nmdc:dobj-11-ev8bpc78 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zc7j0p83.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71d35d455a16985e82f221b57abb662d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1/nmdc_wfrbt-11-zc7j0p83.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71d35d455a16985e82f221b57abb662d nmdc:dobj-11-44dxgn81 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71d35d455a16985e82f221b57abb662d nmdc:dobj-11-9x116g62 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zc7j0p83.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f737a4e9be8426619b91ab3e6cc0a681 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-zc7j0p83.1/nmdc_wfrbt-11-zc7j0p83.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f737a4e9be8426619b91ab3e6cc0a681 nmdc:dobj-11-ntsffp80 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvpsbf06/nmdc:wfrbt-11-nawwqp81.1/nmdc_wfrbt-11-nawwqp81.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f737a4e9be8426619b91ab3e6cc0a681 nmdc:dobj-11-72n2z654 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zvpsbf06 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zc7j0p83.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfrbt-11-zc7j0p83.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nawwqp81.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:899fff535ea5b4c4336718366204c6a5 nmdc:wfrbt-11-nawwqp81.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-zvpsbf06 INFO:root:omics_processing_id: nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0638ba985a67df56f072b7544e46317 nmdc:dobj-11-ytbhdy95 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0638ba985a67df56f072b7544e46317 nmdc:dobj-11-2r1dh165 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-sdbbqs35 -INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vxks5b81.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-vxks5b81.1 +INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ky3nvr73.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-ky3nvr73.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36d4295f78e33152b9f0a2d60eaf4648 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-vxks5b81.1/nmdc_wfrqc-11-vxks5b81.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36d4295f78e33152b9f0a2d60eaf4648 nmdc:dobj-11-sph8m367 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-ky3nvr73.1/nmdc_wfrqc-11-ky3nvr73.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36d4295f78e33152b9f0a2d60eaf4648 nmdc:dobj-11-zdc77r81 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vxks5b81.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ky3nvr73.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80bafe68c83e4be83b2ada0e5f1dee0c -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-vxks5b81.1/nmdc_wfrqc-11-vxks5b81.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80bafe68c83e4be83b2ada0e5f1dee0c nmdc:dobj-11-n3j8hm94 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrqc-11-ky3nvr73.1/nmdc_wfrqc-11-ky3nvr73.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80bafe68c83e4be83b2ada0e5f1dee0c nmdc:dobj-11-0b0gte08 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vxks5b81.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:388f437e34b2719969fbca505275632e nmdc:wfrqc-11-vxks5b81.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ky3nvr73.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:388f437e34b2719969fbca505275632e nmdc:wfrqc-11-ky3nvr73.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-sdbbqs35 -INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-9ny5t513.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-9ny5t513.1 +INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5w24bm05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d92c122124714a61cdedd87dc2e460d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-9ny5t513.1/nmdc_wfmgas-11-9ny5t513.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d92c122124714a61cdedd87dc2e460d nmdc:dobj-11-2wtw8k14 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d92c122124714a61cdedd87dc2e460d nmdc:dobj-11-37ee4y41 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9ny5t513.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:108c62768293874eb901fa014d98c07a -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-9ny5t513.1/nmdc_wfmgas-11-9ny5t513.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:108c62768293874eb901fa014d98c07a nmdc:dobj-11-51jw1330 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:108c62768293874eb901fa014d98c07a nmdc:dobj-11-wvthmm39 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9ny5t513.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b9135feeee2c737cd11c9ff504e87689 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-9ny5t513.1/nmdc_wfmgas-11-9ny5t513.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9135feeee2c737cd11c9ff504e87689 nmdc:dobj-11-a0xm4v56 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9135feeee2c737cd11c9ff504e87689 nmdc:dobj-11-pja03x71 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9ny5t513.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e0348e43569d2a8b15c9ba4796af819 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-9ny5t513.1/nmdc_wfmgas-11-9ny5t513.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e0348e43569d2a8b15c9ba4796af819 nmdc:dobj-11-fqsnjy75 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e0348e43569d2a8b15c9ba4796af819 nmdc:dobj-11-hrefb239 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9ny5t513.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-9ny5t513.1/nmdc_wfmgas-11-9ny5t513.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f nmdc:dobj-11-gvb44e04 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfmgas-11-5w24bm05.1/nmdc_wfmgas-11-5w24bm05.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3f7adcfb7bb5011e06fe2e34e582f2f nmdc:dobj-11-mm4wh987 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9ny5t513.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:388f437e34b2719969fbca505275632e nmdc:wfmgas-11-9ny5t513.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w24bm05.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:388f437e34b2719969fbca505275632e nmdc:wfmgas-11-5w24bm05.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-sdbbqs35 -INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-wxakay36.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1 +INFO:root:New activity id created for nmdc:omprc-11-sdbbqs35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-nr9ysw15.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe7efd7d37ed3c916db73af90e6b4656 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe7efd7d37ed3c916db73af90e6b4656 nmdc:dobj-11-n2js9p60 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe7efd7d37ed3c916db73af90e6b4656 nmdc:dobj-11-mxwaky02 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c484cee43b39868f216cfc9f89e77ba -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c484cee43b39868f216cfc9f89e77ba nmdc:dobj-11-0m9qqr38 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c484cee43b39868f216cfc9f89e77ba nmdc:dobj-11-qgh1yw68 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78972c7f2b3eb2c6ae4041ae696aae90 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78972c7f2b3eb2c6ae4041ae696aae90 nmdc:dobj-11-7sg72295 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78972c7f2b3eb2c6ae4041ae696aae90 nmdc:dobj-11-e27nek86 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d55beb8645eff57d8806666e570d2d3e -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d55beb8645eff57d8806666e570d2d3e nmdc:dobj-11-f7pdeh77 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d55beb8645eff57d8806666e570d2d3e nmdc:dobj-11-91g5vh67 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:187ed60485c2a08b6fde0191a4332f3b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:187ed60485c2a08b6fde0191a4332f3b nmdc:dobj-11-mzp4zy44 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:187ed60485c2a08b6fde0191a4332f3b nmdc:dobj-11-z8xcnb41 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 nmdc:dobj-11-95g7aa63 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a8f3d5833feecd2ec2418cfc3ad5102 nmdc:dobj-11-7g955988 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 nmdc:dobj-11-c058ee86 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd7a38ecc35d0c8ab48d5ca623edcea5 nmdc:dobj-11-pdm7b923 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d61542ab86302b9f661b10e7a90c9bb1 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d61542ab86302b9f661b10e7a90c9bb1 nmdc:dobj-11-gh186q38 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d61542ab86302b9f661b10e7a90c9bb1 nmdc:dobj-11-q7yxre21 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cca621d7bee98da5f55ccbcf3f296342 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-wxakay36.1/nmdc_wfrbt-11-wxakay36.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cca621d7bee98da5f55ccbcf3f296342 nmdc:dobj-11-k7qgxf78 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sdbbqs35/nmdc:wfrbt-11-nr9ysw15.1/nmdc_wfrbt-11-nr9ysw15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cca621d7bee98da5f55ccbcf3f296342 nmdc:dobj-11-gvmjvs55 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-sdbbqs35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wxakay36.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:388f437e34b2719969fbca505275632e nmdc:wfrbt-11-wxakay36.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr9ysw15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:388f437e34b2719969fbca505275632e nmdc:wfrbt-11-nr9ysw15.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-sdbbqs35 INFO:root:omics_processing_id: nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:087821706edc18d844ab743ec8865569 nmdc:dobj-11-pmjhnw62 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:087821706edc18d844ab743ec8865569 nmdc:dobj-11-2xe26z30 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-wjagc521 -INFO:root:New activity id created for nmdc:omprc-11-wjagc521 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fjzj1c42.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrqc-11-fjzj1c42.1 +INFO:root:New activity id created for nmdc:omprc-11-wjagc521 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g2ey6n71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrqc-11-g2ey6n71.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7c5ac69dd2d1161ed0df49e112752296 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrqc-11-fjzj1c42.1/nmdc_wfrqc-11-fjzj1c42.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c5ac69dd2d1161ed0df49e112752296 nmdc:dobj-11-xcnv6k63 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrqc-11-g2ey6n71.1/nmdc_wfrqc-11-g2ey6n71.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c5ac69dd2d1161ed0df49e112752296 nmdc:dobj-11-c89t8t13 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fjzj1c42.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g2ey6n71.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:585ad0fedbbd08dfea2d28a7b3ad6ccd -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrqc-11-fjzj1c42.1/nmdc_wfrqc-11-fjzj1c42.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:585ad0fedbbd08dfea2d28a7b3ad6ccd nmdc:dobj-11-r9w7ep18 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrqc-11-g2ey6n71.1/nmdc_wfrqc-11-g2ey6n71.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:585ad0fedbbd08dfea2d28a7b3ad6ccd nmdc:dobj-11-pv03jc16 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fjzj1c42.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-s2f4y792.1/nmdc_wfmgas-11-s2f4y792.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:689a1c1553dd39e32b2b089b33f05e7d nmdc:dobj-11-exdka107 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-3w4cxz51.1/nmdc_wfmgas-11-3w4cxz51.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:689a1c1553dd39e32b2b089b33f05e7d nmdc:dobj-11-g90vwe09 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s2f4y792.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3w4cxz51.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a2f73f009c688aee3294b7bfb0f5d8f -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-s2f4y792.1/nmdc_wfmgas-11-s2f4y792.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2051c3848f8882f76acca2240af778ee nmdc:dobj-11-3j2wfq63 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfmgas-11-3w4cxz51.1/nmdc_wfmgas-11-3w4cxz51.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2051c3848f8882f76acca2240af778ee nmdc:dobj-11-3jwwv772 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s2f4y792.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3w4cxz51.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40212546ef6fdee6393a1e05c23c4722 -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-6e0h8n80.1/nmdc_wfrbt-11-6e0h8n80.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a8c6bb81833bd93fb2941c292dc743e nmdc:dobj-11-9zkdnx97 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a8c6bb81833bd93fb2941c292dc743e nmdc:dobj-11-gc92mn97 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6e0h8n80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45b079f76ebc5363d5e31b67968a90f7 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-6e0h8n80.1/nmdc_wfrbt-11-6e0h8n80.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45b079f76ebc5363d5e31b67968a90f7 nmdc:dobj-11-knbxk308 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45b079f76ebc5363d5e31b67968a90f7 nmdc:dobj-11-qxnqpe12 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6e0h8n80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0dac6f4bf0bcf2b06450acb586b411f2 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-6e0h8n80.1/nmdc_wfrbt-11-6e0h8n80.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0dac6f4bf0bcf2b06450acb586b411f2 nmdc:dobj-11-0jcj1611 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0dac6f4bf0bcf2b06450acb586b411f2 nmdc:dobj-11-n319ka16 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6e0h8n80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-6e0h8n80.1/nmdc_wfrbt-11-6e0h8n80.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 nmdc:dobj-11-y1zvtv27 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24ddeb9b0bf88d240b8c11d2c7bf6110 nmdc:dobj-11-a3phpe70 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6e0h8n80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f7cc34d80fb00b557c9636a1a495b27 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-6e0h8n80.1/nmdc_wfrbt-11-6e0h8n80.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f7cc34d80fb00b557c9636a1a495b27 nmdc:dobj-11-q0vwxg49 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f7cc34d80fb00b557c9636a1a495b27 nmdc:dobj-11-f8ee1279 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6e0h8n80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b46b161f2f61fe392d93059b2ec257ad -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-6e0h8n80.1/nmdc_wfrbt-11-6e0h8n80.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f355a874a6d82e6bf13bfd516cebbdd1 nmdc:dobj-11-qvwbjc44 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f355a874a6d82e6bf13bfd516cebbdd1 nmdc:dobj-11-694qjk12 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6e0h8n80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fa688952a54066e7aa33a62c42ef037 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-6e0h8n80.1/nmdc_wfrbt-11-6e0h8n80.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa688952a54066e7aa33a62c42ef037 nmdc:dobj-11-53bnny10 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-wjagc521/nmdc:wfrbt-11-jzftwn91.1/nmdc_wfrbt-11-jzftwn91.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa688952a54066e7aa33a62c42ef037 nmdc:dobj-11-4bk3vh52 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-wjagc521 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6e0h8n80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jzftwn91.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5065c2a76ab916e8866d3836cd469534 -INFO:root:New file 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-81n3x223.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0597993d81c0788daf5974490cef7f40 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrqc-11-tm1av004.1/nmdc_wfrqc-11-tm1av004.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0597993d81c0788daf5974490cef7f40 nmdc:dobj-11-r83vag19 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrqc-11-81n3x223.1/nmdc_wfrqc-11-81n3x223.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0597993d81c0788daf5974490cef7f40 nmdc:dobj-11-bd4d6d44 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tm1av004.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfrqc-11-tm1av004.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-81n3x223.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfrqc-11-81n3x223.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-mpwyy287 -INFO:root:New activity id created for nmdc:omprc-11-mpwyy287 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-nnpvsj26.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-nnpvsj26.1 +INFO:root:New activity id created for nmdc:omprc-11-mpwyy287 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-epc8pj76.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29712e8e940103416e599270361200fd -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-nnpvsj26.1/nmdc_wfmgas-11-nnpvsj26.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29712e8e940103416e599270361200fd nmdc:dobj-11-108g2856 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29712e8e940103416e599270361200fd nmdc:dobj-11-1e7e9s30 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nnpvsj26.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61f37cef4009a10fe186a734cc66df57 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-nnpvsj26.1/nmdc_wfmgas-11-nnpvsj26.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61f37cef4009a10fe186a734cc66df57 nmdc:dobj-11-yag37s20 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61f37cef4009a10fe186a734cc66df57 nmdc:dobj-11-2c3h7d83 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nnpvsj26.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:019f39760fdc004add2ee15e6f96b695 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-nnpvsj26.1/nmdc_wfmgas-11-nnpvsj26.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:019f39760fdc004add2ee15e6f96b695 nmdc:dobj-11-awkvv213 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:019f39760fdc004add2ee15e6f96b695 nmdc:dobj-11-v5nz8z77 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nnpvsj26.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41fcb1932d70ad158bd64467f587a7e9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-nnpvsj26.1/nmdc_wfmgas-11-nnpvsj26.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41fcb1932d70ad158bd64467f587a7e9 nmdc:dobj-11-e7eqg206 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41fcb1932d70ad158bd64467f587a7e9 nmdc:dobj-11-dyrh6r52 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nnpvsj26.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e0836aceb5837d49208da0304223b6a -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-nnpvsj26.1/nmdc_wfmgas-11-nnpvsj26.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e0836aceb5837d49208da0304223b6a nmdc:dobj-11-581pfx88 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfmgas-11-epc8pj76.1/nmdc_wfmgas-11-epc8pj76.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e0836aceb5837d49208da0304223b6a nmdc:dobj-11-cm66jm90 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nnpvsj26.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfmgas-11-nnpvsj26.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-epc8pj76.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfmgas-11-epc8pj76.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-mpwyy287 -INFO:root:New activity id created for nmdc:omprc-11-mpwyy287 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-v5awyn21.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1 +INFO:root:New activity id created for nmdc:omprc-11-mpwyy287 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-5cnzw320.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d575a3c8ac62938cf78cea02d3d57bc -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d575a3c8ac62938cf78cea02d3d57bc nmdc:dobj-11-c06w3326 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d575a3c8ac62938cf78cea02d3d57bc nmdc:dobj-11-x3j6a131 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc6ab16aa3a0073a1914e885cb463655 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc6ab16aa3a0073a1914e885cb463655 nmdc:dobj-11-av5zms06 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc6ab16aa3a0073a1914e885cb463655 nmdc:dobj-11-6zpjt881 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:04e4304630e24100383eae8a58c8579c -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04e4304630e24100383eae8a58c8579c nmdc:dobj-11-1bjxm759 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04e4304630e24100383eae8a58c8579c nmdc:dobj-11-ex9kgc55 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 nmdc:dobj-11-4yyt1t17 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c6cf26a89b68b779cfdf451f0a84dc4 nmdc:dobj-11-sntayr97 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7bddcb460f521571aa422eb79cfeb24a -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bddcb460f521571aa422eb79cfeb24a nmdc:dobj-11-vqc68c76 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bddcb460f521571aa422eb79cfeb24a nmdc:dobj-11-dqneqs31 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3689750ab107b9a250599dc304de7a02 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3689750ab107b9a250599dc304de7a02 nmdc:dobj-11-rq4wq478 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3689750ab107b9a250599dc304de7a02 nmdc:dobj-11-jghwq591 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdbcf2b451e44e40f0afa535371531c4 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdbcf2b451e44e40f0afa535371531c4 nmdc:dobj-11-w4zhx404 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdbcf2b451e44e40f0afa535371531c4 nmdc:dobj-11-mr1esj65 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e4b3a8a0bde60626d00d335248b5eb8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e4b3a8a0bde60626d00d335248b5eb8 nmdc:dobj-11-386j4488 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e4b3a8a0bde60626d00d335248b5eb8 nmdc:dobj-11-hsbrg740 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23c0c12d2aeaf1080ca536fa7695d7ac -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-v5awyn21.1/nmdc_wfrbt-11-v5awyn21.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23c0c12d2aeaf1080ca536fa7695d7ac nmdc:dobj-11-b7989d71 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mpwyy287/nmdc:wfrbt-11-5cnzw320.1/nmdc_wfrbt-11-5cnzw320.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23c0c12d2aeaf1080ca536fa7695d7ac nmdc:dobj-11-wv5vbp83 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-mpwyy287 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5awyn21.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfrbt-11-v5awyn21.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5cnzw320.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d00392c1c956b9d5fabee8b942d3be8c nmdc:wfrbt-11-5cnzw320.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-mpwyy287 INFO:root:omics_processing_id: nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60ee79e73d43651cee0e89de0c346a20 nmdc:dobj-11-p9agbp95 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60ee79e73d43651cee0e89de0c346a20 nmdc:dobj-11-nznec290 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-07688c39 -INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sxd4bk25.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-sxd4bk25.1 +INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5h549229.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-5h549229.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c2162fd224d6f4c48062c525bcb68fdd -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-sxd4bk25.1/nmdc_wfrqc-11-sxd4bk25.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2162fd224d6f4c48062c525bcb68fdd nmdc:dobj-11-7rvn9198 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-5h549229.1/nmdc_wfrqc-11-5h549229.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2162fd224d6f4c48062c525bcb68fdd nmdc:dobj-11-926bx433 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sxd4bk25.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5h549229.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0c8be1c03c6f7b03e021001c26a9c7d -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-sxd4bk25.1/nmdc_wfrqc-11-sxd4bk25.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0c8be1c03c6f7b03e021001c26a9c7d nmdc:dobj-11-xxf1y428 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrqc-11-5h549229.1/nmdc_wfrqc-11-5h549229.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0c8be1c03c6f7b03e021001c26a9c7d nmdc:dobj-11-1z8q9s66 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sxd4bk25.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfrqc-11-sxd4bk25.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5h549229.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfrqc-11-5h549229.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-07688c39 -INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-trna5020.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-trna5020.1 +INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-cy6aed55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73859fd8b67980b7c1a3cb631229f115 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-trna5020.1/nmdc_wfmgas-11-trna5020.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73859fd8b67980b7c1a3cb631229f115 nmdc:dobj-11-nm43jn34 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73859fd8b67980b7c1a3cb631229f115 nmdc:dobj-11-j53t1820 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-trna5020.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee11987d24b07a3e387659dab2b99980 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-trna5020.1/nmdc_wfmgas-11-trna5020.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee11987d24b07a3e387659dab2b99980 nmdc:dobj-11-y5k1py14 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee11987d24b07a3e387659dab2b99980 nmdc:dobj-11-a8p56a77 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-trna5020.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-trna5020.1/nmdc_wfmgas-11-trna5020.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb nmdc:dobj-11-8ya35j96 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6cb0fd17b4eb64d3820c6c6f62a9ccb nmdc:dobj-11-8yrs4t76 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-trna5020.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84aaf5070762e47f15b2d54581545ae9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-trna5020.1/nmdc_wfmgas-11-trna5020.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84aaf5070762e47f15b2d54581545ae9 nmdc:dobj-11-0fwm5b12 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84aaf5070762e47f15b2d54581545ae9 nmdc:dobj-11-xk78fm34 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-trna5020.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16f600725c836803f8a3cc62ec884669 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-trna5020.1/nmdc_wfmgas-11-trna5020.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16f600725c836803f8a3cc62ec884669 nmdc:dobj-11-hcmp0j65 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfmgas-11-cy6aed55.1/nmdc_wfmgas-11-cy6aed55.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16f600725c836803f8a3cc62ec884669 nmdc:dobj-11-vhnqhk38 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-trna5020.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfmgas-11-trna5020.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cy6aed55.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfmgas-11-cy6aed55.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-07688c39 -INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-et2y5t30.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1 +INFO:root:New activity id created for nmdc:omprc-11-07688c39 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jjyz3b39.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:257e2026c3edbe6bb07c5e97d47fa33a -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:257e2026c3edbe6bb07c5e97d47fa33a nmdc:dobj-11-06r3e426 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:257e2026c3edbe6bb07c5e97d47fa33a nmdc:dobj-11-mdqy8n94 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7792943f7c8945b0bb5ac090138dc47 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7792943f7c8945b0bb5ac090138dc47 nmdc:dobj-11-bccx6172 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7792943f7c8945b0bb5ac090138dc47 nmdc:dobj-11-4xszmz26 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b62a2b2be1c8f92ae1350b08ee06b8c -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b62a2b2be1c8f92ae1350b08ee06b8c nmdc:dobj-11-1qkrqc16 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b62a2b2be1c8f92ae1350b08ee06b8c nmdc:dobj-11-dn6x7960 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd0e56f9403edd807ddb8ac2058df494 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd0e56f9403edd807ddb8ac2058df494 nmdc:dobj-11-vsghc454 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd0e56f9403edd807ddb8ac2058df494 nmdc:dobj-11-f7c94905 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d nmdc:dobj-11-k3xrrz95 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7e9d2ed1c612e180fc7f6e30c97a34d nmdc:dobj-11-tsppzg30 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4db292aa09f3bd8064dd7898f2b1d33f -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4db292aa09f3bd8064dd7898f2b1d33f nmdc:dobj-11-2rz7dm74 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4db292aa09f3bd8064dd7898f2b1d33f nmdc:dobj-11-aj3xh359 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c23a5200a4850523bf1b71eb2df31cb9 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c23a5200a4850523bf1b71eb2df31cb9 nmdc:dobj-11-fpbcvn55 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c23a5200a4850523bf1b71eb2df31cb9 nmdc:dobj-11-yt384426 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ce3f4a57144426843cb82a9c36c23f9 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ce3f4a57144426843cb82a9c36c23f9 nmdc:dobj-11-43cxbx16 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ce3f4a57144426843cb82a9c36c23f9 nmdc:dobj-11-f6m7tj95 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22ae2a542b60fd0a56c098eef57d0a6d -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-et2y5t30.1/nmdc_wfrbt-11-et2y5t30.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22ae2a542b60fd0a56c098eef57d0a6d nmdc:dobj-11-z6rtxr30 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-07688c39/nmdc:wfrbt-11-jjyz3b39.1/nmdc_wfrbt-11-jjyz3b39.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22ae2a542b60fd0a56c098eef57d0a6d nmdc:dobj-11-57b12w61 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-07688c39 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-et2y5t30.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfrbt-11-et2y5t30.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jjyz3b39.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:998e5af496879f993d9a2fd0c38c5f00 nmdc:wfrbt-11-jjyz3b39.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-07688c39 INFO:root:omics_processing_id: nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5b5e247913c5cdb5511dff98d349ce2 nmdc:dobj-11-at0kek61 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5b5e247913c5cdb5511dff98d349ce2 nmdc:dobj-11-wbg30737 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-6q7gzb26 -INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-wwywmp98.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-wwywmp98.1 +INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zd95qq68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-zd95qq68.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bf4fe5773ebb36e816a55d34c1c54e16 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-wwywmp98.1/nmdc_wfrqc-11-wwywmp98.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf4fe5773ebb36e816a55d34c1c54e16 nmdc:dobj-11-fpf0rt63 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-zd95qq68.1/nmdc_wfrqc-11-zd95qq68.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf4fe5773ebb36e816a55d34c1c54e16 nmdc:dobj-11-4dgfbe37 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wwywmp98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zd95qq68.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2429c25a417bf079f40db7740183c833 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-wwywmp98.1/nmdc_wfrqc-11-wwywmp98.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2429c25a417bf079f40db7740183c833 nmdc:dobj-11-zm5nqf68 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrqc-11-zd95qq68.1/nmdc_wfrqc-11-zd95qq68.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2429c25a417bf079f40db7740183c833 nmdc:dobj-11-h43cjx23 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wwywmp98.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfrqc-11-wwywmp98.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zd95qq68.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfrqc-11-zd95qq68.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-6q7gzb26 -INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3e254h85.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-3e254h85.1 +INFO:root:New activity id created for nmdc:omprc-11-6q7gzb26 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hzsb8y98.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1da0fbcf3afbbfc32bf938ee99f6d01e -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-3e254h85.1/nmdc_wfmgas-11-3e254h85.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1da0fbcf3afbbfc32bf938ee99f6d01e nmdc:dobj-11-da4qmq26 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1da0fbcf3afbbfc32bf938ee99f6d01e nmdc:dobj-11-fp4pnk94 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e254h85.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bc422981525ab9157c3208633b332fb4 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-3e254h85.1/nmdc_wfmgas-11-3e254h85.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7278c2de111b4ee333e3c0bef8edd6c nmdc:dobj-11-g1188f61 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7278c2de111b4ee333e3c0bef8edd6c nmdc:dobj-11-8z3kz971 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e254h85.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6ddc048297ca0e8ac05ca27697d05a43 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-3e254h85.1/nmdc_wfmgas-11-3e254h85.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ddc048297ca0e8ac05ca27697d05a43 nmdc:dobj-11-533qr608 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ddc048297ca0e8ac05ca27697d05a43 nmdc:dobj-11-3zzr0h09 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e254h85.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:328dbf8d5b36a966e33f6e58bf429850 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-3e254h85.1/nmdc_wfmgas-11-3e254h85.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:328dbf8d5b36a966e33f6e58bf429850 nmdc:dobj-11-gvftfg56 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfmgas-11-hzsb8y98.1/nmdc_wfmgas-11-hzsb8y98.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:328dbf8d5b36a966e33f6e58bf429850 nmdc:dobj-11-9zbd1s45 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3e254h85.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a3f181696a51fd9baab2c06e02de07a3 nmdc:wfmgas-11-3e254h85.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hzsb8y98.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-a1sj9m75.1/nmdc_wfrbt-11-a1sj9m75.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47ef66b14c923740694c368b2f34bb36 nmdc:dobj-11-7g330886 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47ef66b14c923740694c368b2f34bb36 nmdc:dobj-11-sxadzh80 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a1sj9m75.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60d3c830723011c4663fc54d3b9ae8c2 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-a1sj9m75.1/nmdc_wfrbt-11-a1sj9m75.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60d3c830723011c4663fc54d3b9ae8c2 nmdc:dobj-11-y790fr96 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60d3c830723011c4663fc54d3b9ae8c2 nmdc:dobj-11-vfmzjt62 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a1sj9m75.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c2d98178b8c9f57abb06a362726ae64b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-a1sj9m75.1/nmdc_wfrbt-11-a1sj9m75.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2d98178b8c9f57abb06a362726ae64b nmdc:dobj-11-v3vvek60 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2d98178b8c9f57abb06a362726ae64b nmdc:dobj-11-b58cwm82 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a1sj9m75.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:99c2b08cc001838f05c50dea136449a4 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-a1sj9m75.1/nmdc_wfrbt-11-a1sj9m75.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99c2b08cc001838f05c50dea136449a4 nmdc:dobj-11-fcz6gr36 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99c2b08cc001838f05c50dea136449a4 nmdc:dobj-11-jf6nxh37 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a1sj9m75.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c8cadd89f3b28a31a7b72eceae2274c -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-a1sj9m75.1/nmdc_wfrbt-11-a1sj9m75.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c8cadd89f3b28a31a7b72eceae2274c nmdc:dobj-11-qxtpjh43 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c8cadd89f3b28a31a7b72eceae2274c nmdc:dobj-11-8jm70447 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a1sj9m75.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b1b076e94e33b1417cf8ba0df8ed51f -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-a1sj9m75.1/nmdc_wfrbt-11-a1sj9m75.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b1b076e94e33b1417cf8ba0df8ed51f nmdc:dobj-11-vdawsm69 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b1b076e94e33b1417cf8ba0df8ed51f nmdc:dobj-11-v4qk5976 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a1sj9m75.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86bfc9d51061a804c95430240541b5ae -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-a1sj9m75.1/nmdc_wfrbt-11-a1sj9m75.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bfc9d51061a804c95430240541b5ae nmdc:dobj-11-1xk2g397 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86bfc9d51061a804c95430240541b5ae nmdc:dobj-11-nxk7b575 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a1sj9m75.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f54d6d4971f33c2e6018c7cc01d70c54 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-a1sj9m75.1/nmdc_wfrbt-11-a1sj9m75.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f54d6d4971f33c2e6018c7cc01d70c54 nmdc:dobj-11-zzvf4e74 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6q7gzb26/nmdc:wfrbt-11-vg2dn032.1/nmdc_wfrbt-11-vg2dn032.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f54d6d4971f33c2e6018c7cc01d70c54 nmdc:dobj-11-0ws3mz94 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-6q7gzb26 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a1sj9m75.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg2dn032.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88596ee0da2e8edd19fd39c208757bd2 -INFO:root:New file 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfrqc-11-d64a9e86.1/nmdc_wfrqc-11-d64a9e86.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3615e5d3379aae0d85bd244bb25b42a7 nmdc:dobj-11-878b5615 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-pbwhv175 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d64a9e86.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5152db67096ea0f81fb877973aba00f +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfrqc-11-d64a9e86.1/nmdc_wfrqc-11-d64a9e86.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5152db67096ea0f81fb877973aba00f nmdc:dobj-11-x1qprj36 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pbwhv175 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d64a9e86.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:613c66031f3a5c73716b02ade1cef55a nmdc:wfrqc-11-d64a9e86.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-pbwhv175 +INFO:root:New activity id created for nmdc:omprc-11-pbwhv175 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yhk5cc67.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:28f86aa5f580484f8e6a8c86fccb5810 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28f86aa5f580484f8e6a8c86fccb5810 nmdc:dobj-11-07smrm83 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-pbwhv175 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df3e85ecef6137d5317d4993902353dd +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df3e85ecef6137d5317d4993902353dd nmdc:dobj-11-tb9c4f12 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-pbwhv175 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e288183958c6d58c8e30c89e10eb4ae7 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e288183958c6d58c8e30c89e10eb4ae7 nmdc:dobj-11-xr81eq55 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pbwhv175 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37161ecacc5fc6ec47914e6fff906a80 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37161ecacc5fc6ec47914e6fff906a80 nmdc:dobj-11-ex5hrq41 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-pbwhv175 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b28dcf7c7b102b69889cbbedf4baa355 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pbwhv175/nmdc:wfmgas-11-yhk5cc67.1/nmdc_wfmgas-11-yhk5cc67.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b28dcf7c7b102b69889cbbedf4baa355 nmdc:dobj-11-5whtpg87 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-pbwhv175 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yhk5cc67.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:613c66031f3a5c73716b02ade1cef55a nmdc:wfmgas-11-yhk5cc67.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-pbwhv175 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-pbwhv175 +INFO:root:omics_processing_id: nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9676ebc038756ae55077770846391495 nmdc:dobj-11-s22yhg85 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gb5k8p40 +INFO:root:New activity id created for nmdc:omprc-11-gb5k8p40 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-01kc2n71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-01kc2n71.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:035767058c43f56c7df73c2420e8fcd1 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-01kc2n71.1/nmdc_wfrqc-11-01kc2n71.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:035767058c43f56c7df73c2420e8fcd1 nmdc:dobj-11-q3pj8b78 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-01kc2n71.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c18b2f187dfeb5e12c74aa3b5757825 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfrqc-11-01kc2n71.1/nmdc_wfrqc-11-01kc2n71.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c18b2f187dfeb5e12c74aa3b5757825 nmdc:dobj-11-szh3zx66 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-01kc2n71.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f nmdc:wfrqc-11-01kc2n71.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gb5k8p40 +INFO:root:New activity id created for nmdc:omprc-11-gb5k8p40 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3j3zy491.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9c1313dfb5523d45f828410e805dedc +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9c1313dfb5523d45f828410e805dedc nmdc:dobj-11-dprqgm22 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:913d2163dd05fab3fc0d9a829a1f91d0 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:913d2163dd05fab3fc0d9a829a1f91d0 nmdc:dobj-11-0eswps02 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cecd611724e7889fb632c205f67b85cd +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cecd611724e7889fb632c205f67b85cd nmdc:dobj-11-t02f3457 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94d4aa6301b03d885c76019351617a45 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94d4aa6301b03d885c76019351617a45 nmdc:dobj-11-wdkkdq58 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3deb0d9239ccc9a6603327b7bebb5dbb +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gb5k8p40/nmdc:wfmgas-11-3j3zy491.1/nmdc_wfmgas-11-3j3zy491.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3deb0d9239ccc9a6603327b7bebb5dbb nmdc:dobj-11-3kw68k71 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j3zy491.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:bf1fcc9ebcb26e9386fe5f063f9aa96f nmdc:wfmgas-11-3j3zy491.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gb5k8p40 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gb5k8p40 INFO:root:omics_processing_id: nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0df5ac2c9052a2b45cfd9578aaa562f7 nmdc:dobj-11-rkt83787 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0df5ac2c9052a2b45cfd9578aaa562f7 nmdc:dobj-11-n3zafb12 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-xhnf2e85 -INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7220cx40.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-7220cx40.1 +INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9nmza498.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-9nmza498.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42470018e775d9dc001d00d35eed7266 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-7220cx40.1/nmdc_wfrqc-11-7220cx40.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42470018e775d9dc001d00d35eed7266 nmdc:dobj-11-d1h8vm38 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-9nmza498.1/nmdc_wfrqc-11-9nmza498.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42470018e775d9dc001d00d35eed7266 nmdc:dobj-11-16sj4n20 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7220cx40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9nmza498.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb2b03b041c125d2fec7729976367d66 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-7220cx40.1/nmdc_wfrqc-11-7220cx40.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb2b03b041c125d2fec7729976367d66 nmdc:dobj-11-bc0wa563 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrqc-11-9nmza498.1/nmdc_wfrqc-11-9nmza498.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb2b03b041c125d2fec7729976367d66 nmdc:dobj-11-m5enby22 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7220cx40.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfrqc-11-7220cx40.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9nmza498.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfrqc-11-9nmza498.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-xhnf2e85 -INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5vawpf85.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-5vawpf85.1 +INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vekpjr35.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7ef26cb6f3ea8041c48ec69200f06f9 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-5vawpf85.1/nmdc_wfmgas-11-5vawpf85.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7ef26cb6f3ea8041c48ec69200f06f9 nmdc:dobj-11-xj250k62 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7ef26cb6f3ea8041c48ec69200f06f9 nmdc:dobj-11-qyzbgk32 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5vawpf85.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34c609c839345bb3b08a53c19681bf64 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-5vawpf85.1/nmdc_wfmgas-11-5vawpf85.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34c609c839345bb3b08a53c19681bf64 nmdc:dobj-11-f8xvbz64 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34c609c839345bb3b08a53c19681bf64 nmdc:dobj-11-a54dbp63 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5vawpf85.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c313ddb8f3093a92880762319e44582 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-5vawpf85.1/nmdc_wfmgas-11-5vawpf85.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c313ddb8f3093a92880762319e44582 nmdc:dobj-11-nd3f2c16 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c313ddb8f3093a92880762319e44582 nmdc:dobj-11-fbt51391 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5vawpf85.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03bf9b7496d0e06b73981e24e77e846b -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-5vawpf85.1/nmdc_wfmgas-11-5vawpf85.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03bf9b7496d0e06b73981e24e77e846b nmdc:dobj-11-4qwvmk10 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03bf9b7496d0e06b73981e24e77e846b nmdc:dobj-11-12sf7j08 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5vawpf85.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:342fad07e0559d930a7946f9470b9108 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-5vawpf85.1/nmdc_wfmgas-11-5vawpf85.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:342fad07e0559d930a7946f9470b9108 nmdc:dobj-11-vqkn7775 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfmgas-11-vekpjr35.1/nmdc_wfmgas-11-vekpjr35.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:342fad07e0559d930a7946f9470b9108 nmdc:dobj-11-s8md3h97 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5vawpf85.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfmgas-11-5vawpf85.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vekpjr35.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfmgas-11-vekpjr35.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-xhnf2e85 -INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-22g3a947.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1 +INFO:root:New activity id created for nmdc:omprc-11-xhnf2e85 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-cjjd1x81.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d nmdc:dobj-11-5avw5j22 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e893d2703bcaa4c4a54e0e0b4e01e48d nmdc:dobj-11-x17fp940 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a701444fa38828c5e0d8e91c25042a19 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a701444fa38828c5e0d8e91c25042a19 nmdc:dobj-11-4gtbj347 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a701444fa38828c5e0d8e91c25042a19 nmdc:dobj-11-yndsr359 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:663b83cb3df49f525de52ae963570a18 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:663b83cb3df49f525de52ae963570a18 nmdc:dobj-11-9nmrt969 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:663b83cb3df49f525de52ae963570a18 nmdc:dobj-11-9g62x378 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cc4b117ac9f1d11bb908f5ad8e51567 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cc4b117ac9f1d11bb908f5ad8e51567 nmdc:dobj-11-cr16hh47 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cc4b117ac9f1d11bb908f5ad8e51567 nmdc:dobj-11-yegsja29 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 nmdc:dobj-11-hpg64z92 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40bb48a30d40f0e9bcf00f831c1a4ed5 nmdc:dobj-11-kjrk8r79 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ee5d7b361966acd41d3026be09f6153 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ee5d7b361966acd41d3026be09f6153 nmdc:dobj-11-tz3h5310 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ee5d7b361966acd41d3026be09f6153 nmdc:dobj-11-67xeft19 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6e04f5f38c4b5bba26ffff78245aa752 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e04f5f38c4b5bba26ffff78245aa752 nmdc:dobj-11-yje23k41 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e04f5f38c4b5bba26ffff78245aa752 nmdc:dobj-11-fb6mt204 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62fa4c63db827ce9f26ca242f04d6ee7 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62fa4c63db827ce9f26ca242f04d6ee7 nmdc:dobj-11-hzha3495 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62fa4c63db827ce9f26ca242f04d6ee7 nmdc:dobj-11-fj2dhe72 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10c60ea0bc3112617748a056e3d10884 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-22g3a947.1/nmdc_wfrbt-11-22g3a947.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10c60ea0bc3112617748a056e3d10884 nmdc:dobj-11-r77tga51 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xhnf2e85/nmdc:wfrbt-11-cjjd1x81.1/nmdc_wfrbt-11-cjjd1x81.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10c60ea0bc3112617748a056e3d10884 nmdc:dobj-11-kspabv36 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-xhnf2e85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-22g3a947.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a7817ed507f90c680b7c8d87df25bfdc nmdc:wfrbt-11-22g3a947.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cjjd1x81.1_kraken2_krona.html 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-88t0gn98.1/nmdc_wfmgas-11-88t0gn98.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d60dc00d8089ccc9770a3cf19362fb7c nmdc:dobj-11-e2q4p568 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfmgas-11-9x5z1117.1/nmdc_wfmgas-11-9x5z1117.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d60dc00d8089ccc9770a3cf19362fb7c nmdc:dobj-11-swxatf59 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-88t0gn98.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9x5z1117.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43ec0c58f402d6f030f5815380870c17 -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-fp7y5q96.1/nmdc_wfrbt-11-fp7y5q96.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db4d41216a837e140d5974241bfe4c8c nmdc:dobj-11-kbt1v992 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db4d41216a837e140d5974241bfe4c8c nmdc:dobj-11-rzqyhv76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fp7y5q96.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4551b05f4691e200074eba9c269957a1 -INFO:root:New file path computed for GOTTCHA2 Report Full: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-fp7y5q96.1/nmdc_wfrbt-11-fp7y5q96.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91df102105d5bfd59f299da88dfff9d3 nmdc:dobj-11-gdhzk240 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91df102105d5bfd59f299da88dfff9d3 nmdc:dobj-11-w0rehb54 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fp7y5q96.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab5b836ecf40570430ee3feab915df37 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-fp7y5q96.1/nmdc_wfrbt-11-fp7y5q96.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab5b836ecf40570430ee3feab915df37 nmdc:dobj-11-thpxmb14 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab5b836ecf40570430ee3feab915df37 nmdc:dobj-11-n31tfk44 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fp7y5q96.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:67b8e2a863e637123646ee6a635ef783 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-fp7y5q96.1/nmdc_wfrbt-11-fp7y5q96.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:67b8e2a863e637123646ee6a635ef783 nmdc:dobj-11-cxvavq26 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:67b8e2a863e637123646ee6a635ef783 nmdc:dobj-11-1aasf309 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fp7y5q96.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:498f456b63f8c718ec9ea353d655830d -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-fp7y5q96.1/nmdc_wfrbt-11-fp7y5q96.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:498f456b63f8c718ec9ea353d655830d nmdc:dobj-11-8ynvw274 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:498f456b63f8c718ec9ea353d655830d nmdc:dobj-11-bmxqxs23 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fp7y5q96.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b9d33d6db6043274c8b60d086078d2b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-fp7y5q96.1/nmdc_wfrbt-11-fp7y5q96.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b9d33d6db6043274c8b60d086078d2b nmdc:dobj-11-cysjgk60 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b9d33d6db6043274c8b60d086078d2b nmdc:dobj-11-gcj2m937 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fp7y5q96.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dff52f085f09868fc1ad1ace14531279 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-fp7y5q96.1/nmdc_wfrbt-11-fp7y5q96.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dff52f085f09868fc1ad1ace14531279 nmdc:dobj-11-chj81t45 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dff52f085f09868fc1ad1ace14531279 nmdc:dobj-11-hf660j04 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fp7y5q96.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a20dae35d1650215bc907ba60821b935 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-fp7y5q96.1/nmdc_wfrbt-11-fp7y5q96.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a20dae35d1650215bc907ba60821b935 nmdc:dobj-11-8wj1vv10 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t4hk7066/nmdc:wfrbt-11-64f3nw32.1/nmdc_wfrbt-11-64f3nw32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a20dae35d1650215bc907ba60821b935 nmdc:dobj-11-cbemzt60 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t4hk7066 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fp7y5q96.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d2646debbfc0164979d65b81bf59d8c9 nmdc:wfrbt-11-fp7y5q96.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-64f3nw32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d2646debbfc0164979d65b81bf59d8c9 nmdc:wfrbt-11-64f3nw32.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-t4hk7066 INFO:root:omics_processing_id: nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:259a1435146041ed02aa079a007fb06c nmdc:dobj-11-mnzy6s77 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:259a1435146041ed02aa079a007fb06c nmdc:dobj-11-w3j5t303 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-f0qnth40 -INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9vbr3j07.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-9vbr3j07.1 +INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0a61s396.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-0a61s396.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac7f371fdf371a8ea7bc4da5a26aa248 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-9vbr3j07.1/nmdc_wfrqc-11-9vbr3j07.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac7f371fdf371a8ea7bc4da5a26aa248 nmdc:dobj-11-dckmfr17 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-0a61s396.1/nmdc_wfrqc-11-0a61s396.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac7f371fdf371a8ea7bc4da5a26aa248 nmdc:dobj-11-4srnsb80 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9vbr3j07.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0a61s396.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f3feb05dca2a847527c507d339a5053 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-9vbr3j07.1/nmdc_wfrqc-11-9vbr3j07.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f3feb05dca2a847527c507d339a5053 nmdc:dobj-11-679a3b08 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrqc-11-0a61s396.1/nmdc_wfrqc-11-0a61s396.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f3feb05dca2a847527c507d339a5053 nmdc:dobj-11-5vgabf16 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9vbr3j07.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfrqc-11-9vbr3j07.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0a61s396.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfrqc-11-0a61s396.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-f0qnth40 -INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-gyxdsk52.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-gyxdsk52.1 +INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yd6qv840.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-gyxdsk52.1/nmdc_wfmgas-11-gyxdsk52.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 nmdc:dobj-11-7ec0zh31 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8247d4b23bbb27e9c04ea1bfadb600b6 nmdc:dobj-11-3yfbqn19 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gyxdsk52.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b143c3b4d83f74c3a8e485ab854244c -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-gyxdsk52.1/nmdc_wfmgas-11-gyxdsk52.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b143c3b4d83f74c3a8e485ab854244c nmdc:dobj-11-q368w208 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b143c3b4d83f74c3a8e485ab854244c nmdc:dobj-11-a22z2e18 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gyxdsk52.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f87ff508c3fdb000f68e7cc4be00fc9a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-gyxdsk52.1/nmdc_wfmgas-11-gyxdsk52.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f87ff508c3fdb000f68e7cc4be00fc9a nmdc:dobj-11-y3wmhr90 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f87ff508c3fdb000f68e7cc4be00fc9a nmdc:dobj-11-h366jf53 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gyxdsk52.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:678089696cb48800280025efbaa9d8e9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-gyxdsk52.1/nmdc_wfmgas-11-gyxdsk52.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:678089696cb48800280025efbaa9d8e9 nmdc:dobj-11-mg0b7095 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:678089696cb48800280025efbaa9d8e9 nmdc:dobj-11-nqtcz756 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gyxdsk52.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e68f1da7de72154b54911586a6642016 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-gyxdsk52.1/nmdc_wfmgas-11-gyxdsk52.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e68f1da7de72154b54911586a6642016 nmdc:dobj-11-zs8hys86 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfmgas-11-yd6qv840.1/nmdc_wfmgas-11-yd6qv840.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e68f1da7de72154b54911586a6642016 nmdc:dobj-11-8bp0sn31 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gyxdsk52.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfmgas-11-gyxdsk52.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yd6qv840.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfmgas-11-yd6qv840.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-f0qnth40 -INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qk1htc94.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1 +INFO:root:New activity id created for nmdc:omprc-11-f0qnth40 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gz4na728.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b60788f3b1d03f3990aac1e179f3b3a0 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b60788f3b1d03f3990aac1e179f3b3a0 nmdc:dobj-11-xcjk5d50 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b60788f3b1d03f3990aac1e179f3b3a0 nmdc:dobj-11-g4wvdg38 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 nmdc:dobj-11-exm68h16 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ef1861d4c87c2ce5009d0761e5b2fb5 nmdc:dobj-11-8grt4r75 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d94983c3f334998b63c881da4063a5b4 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94983c3f334998b63c881da4063a5b4 nmdc:dobj-11-5cvbvx13 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94983c3f334998b63c881da4063a5b4 nmdc:dobj-11-stze3e20 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:efb94c49864f43e751a74fa5967b2007 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efb94c49864f43e751a74fa5967b2007 nmdc:dobj-11-ae65jn54 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:efb94c49864f43e751a74fa5967b2007 nmdc:dobj-11-vw8v2s09 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25bba5aeb0e33c372fead03b587a2098 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25bba5aeb0e33c372fead03b587a2098 nmdc:dobj-11-0vt8x137 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25bba5aeb0e33c372fead03b587a2098 nmdc:dobj-11-c9pwyp19 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d60f7d7173f99100d51e6d3a7a6f7153 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d60f7d7173f99100d51e6d3a7a6f7153 nmdc:dobj-11-rh5eaf37 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d60f7d7173f99100d51e6d3a7a6f7153 nmdc:dobj-11-efh21410 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b576e70a64c5094d84a12532c977d57b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b576e70a64c5094d84a12532c977d57b nmdc:dobj-11-sy7r1564 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b576e70a64c5094d84a12532c977d57b nmdc:dobj-11-6pdtd994 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82d8ed24c5b9abfc452aae9917021ccd -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82d8ed24c5b9abfc452aae9917021ccd nmdc:dobj-11-61k4wv53 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82d8ed24c5b9abfc452aae9917021ccd nmdc:dobj-11-e9pzwp28 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-qk1htc94.1/nmdc_wfrbt-11-qk1htc94.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 nmdc:dobj-11-cetjak08 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f0qnth40/nmdc:wfrbt-11-gz4na728.1/nmdc_wfrbt-11-gz4na728.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ed3c80c4086e074aee9aa73c38fcdc2 nmdc:dobj-11-pg03yr93 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-f0qnth40 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qk1htc94.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfrbt-11-qk1htc94.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gz4na728.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:011eeeafbecfe9de0cc39c3d23bc4406 nmdc:wfrbt-11-gz4na728.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-f0qnth40 INFO:root:omics_processing_id: nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1852a6601023d802e67f41aef7dfcde nmdc:dobj-11-k4enh906 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1852a6601023d802e67f41aef7dfcde nmdc:dobj-11-y9z70074 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-36m85r16 -INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qcxv5030.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-qcxv5030.1 +INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-b0r39692.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b0r39692.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37cbca8544d40c5cff4d0fe368c40cc7 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-qcxv5030.1/nmdc_wfrqc-11-qcxv5030.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37cbca8544d40c5cff4d0fe368c40cc7 nmdc:dobj-11-rzwx3r18 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrqc-11-b0r39692.1/nmdc_wfrqc-11-b0r39692.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37cbca8544d40c5cff4d0fe368c40cc7 nmdc:dobj-11-ma8pbq49 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qcxv5030.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfrqc-11-qcxv5030.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b0r39692.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfrqc-11-b0r39692.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-36m85r16 -INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jkpf3y87.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-jkpf3y87.1 +INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-a2exa458.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e8c101a054656ec574f23b925894f2dd -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-jkpf3y87.1/nmdc_wfmgas-11-jkpf3y87.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8c101a054656ec574f23b925894f2dd nmdc:dobj-11-tp4r7v89 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8c101a054656ec574f23b925894f2dd nmdc:dobj-11-gc8gxv94 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jkpf3y87.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd63d67a3005f9ef6b7a2c18e10ffe7f -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-jkpf3y87.1/nmdc_wfmgas-11-jkpf3y87.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd63d67a3005f9ef6b7a2c18e10ffe7f nmdc:dobj-11-bm7y7m22 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd63d67a3005f9ef6b7a2c18e10ffe7f nmdc:dobj-11-8h1hcm02 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jkpf3y87.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3f36588145928a2fd22d040d6895239 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-jkpf3y87.1/nmdc_wfmgas-11-jkpf3y87.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3f36588145928a2fd22d040d6895239 nmdc:dobj-11-xc15ba57 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3f36588145928a2fd22d040d6895239 nmdc:dobj-11-j4b2hb97 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jkpf3y87.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-jkpf3y87.1/nmdc_wfmgas-11-jkpf3y87.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d nmdc:dobj-11-3dxpk134 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34ff5f727c1c0b22ac9a5b5f9ccce85d nmdc:dobj-11-ff5r2s10 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jkpf3y87.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d125b2c61a4c6e264cc66e62e67b871a -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-jkpf3y87.1/nmdc_wfmgas-11-jkpf3y87.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d125b2c61a4c6e264cc66e62e67b871a nmdc:dobj-11-btngsk49 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfmgas-11-a2exa458.1/nmdc_wfmgas-11-a2exa458.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d125b2c61a4c6e264cc66e62e67b871a nmdc:dobj-11-nppc9y58 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jkpf3y87.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfmgas-11-jkpf3y87.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-a2exa458.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfmgas-11-a2exa458.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-36m85r16 -INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-32g22w53.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1 +INFO:root:New activity id created for nmdc:omprc-11-36m85r16 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-x8a03x02.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a6dcaa2bab4c2fff6ba5b7b869896660 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6dcaa2bab4c2fff6ba5b7b869896660 nmdc:dobj-11-6g7r1m60 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6dcaa2bab4c2fff6ba5b7b869896660 nmdc:dobj-11-s0y5yw34 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12247816b11fcb66edec5d823e6936eb -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12247816b11fcb66edec5d823e6936eb nmdc:dobj-11-5jkvm550 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12247816b11fcb66edec5d823e6936eb nmdc:dobj-11-jk6d0119 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9caf84609b9ec4098a2d3467a1d9111b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9caf84609b9ec4098a2d3467a1d9111b nmdc:dobj-11-3kennw72 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9caf84609b9ec4098a2d3467a1d9111b nmdc:dobj-11-qxbbsh52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:279a423a9e0402eaafd7fb1ea4e30457 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:279a423a9e0402eaafd7fb1ea4e30457 nmdc:dobj-11-94jznd86 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:279a423a9e0402eaafd7fb1ea4e30457 nmdc:dobj-11-aethhz32 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ce6833391d9bd0639e5476ecee4a14b3 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce6833391d9bd0639e5476ecee4a14b3 nmdc:dobj-11-fpa49857 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce6833391d9bd0639e5476ecee4a14b3 nmdc:dobj-11-km6sc309 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:736a8509c72de5b9fa0f913b8a1b87cb -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:736a8509c72de5b9fa0f913b8a1b87cb nmdc:dobj-11-hcgcgq15 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:736a8509c72de5b9fa0f913b8a1b87cb nmdc:dobj-11-g447x106 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47d13caca51ed3fa89814f24305ea38d -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d13caca51ed3fa89814f24305ea38d nmdc:dobj-11-e9f6ct83 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d13caca51ed3fa89814f24305ea38d nmdc:dobj-11-0h6w7j92 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdd7dfb77cb680bb57d7bd3570c94854 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdd7dfb77cb680bb57d7bd3570c94854 nmdc:dobj-11-9k2b6h31 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdd7dfb77cb680bb57d7bd3570c94854 nmdc:dobj-11-jyb4wj71 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:28593bff3c397004b8d010ff71e4f691 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-32g22w53.1/nmdc_wfrbt-11-32g22w53.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28593bff3c397004b8d010ff71e4f691 nmdc:dobj-11-dxe3ap62 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-36m85r16/nmdc:wfrbt-11-x8a03x02.1/nmdc_wfrbt-11-x8a03x02.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28593bff3c397004b8d010ff71e4f691 nmdc:dobj-11-ecvgr408 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-36m85r16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32g22w53.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfrbt-11-32g22w53.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8a03x02.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:125dc105df7b1b5249c2b56db95e530e nmdc:wfrbt-11-x8a03x02.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-36m85r16 INFO:root:omics_processing_id: nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94f5b389c2d9f7f5bc92e9fddedfc775 nmdc:dobj-11-vsrd9949 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94f5b389c2d9f7f5bc92e9fddedfc775 nmdc:dobj-11-dwg21e74 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-f1akyc51 -INFO:root:New activity id created for nmdc:omprc-11-f1akyc51 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8ksb5m93.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrqc-11-8ksb5m93.1 +INFO:root:New activity id created for nmdc:omprc-11-f1akyc51 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7hqkgx61.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrqc-11-7hqkgx61.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74a00e47216badafe992e88abfa3af8c -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrqc-11-8ksb5m93.1/nmdc_wfrqc-11-8ksb5m93.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74a00e47216badafe992e88abfa3af8c nmdc:dobj-11-fed8bn66 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrqc-11-7hqkgx61.1/nmdc_wfrqc-11-7hqkgx61.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74a00e47216badafe992e88abfa3af8c nmdc:dobj-11-mvmbh211 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8ksb5m93.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7hqkgx61.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ecaf927c1286b8ded3b9f4bf5a71a01 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrqc-11-8ksb5m93.1/nmdc_wfrqc-11-8ksb5m93.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ecaf927c1286b8ded3b9f4bf5a71a01 nmdc:dobj-11-z4xb0w09 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrqc-11-7hqkgx61.1/nmdc_wfrqc-11-7hqkgx61.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ecaf927c1286b8ded3b9f4bf5a71a01 nmdc:dobj-11-sf5gyc75 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8ksb5m93.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-12wp0s75.1/nmdc_wfmgas-11-12wp0s75.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48847c047bb1832a1bb60521492690f9 nmdc:dobj-11-51x16647 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-rxe0de59.1/nmdc_wfmgas-11-rxe0de59.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48847c047bb1832a1bb60521492690f9 nmdc:dobj-11-1kmtp435 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-12wp0s75.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxe0de59.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24cc168e055aee129e3a86dab70805f3 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-12wp0s75.1/nmdc_wfmgas-11-12wp0s75.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25278dea8043e4e93c34feeb80546796 nmdc:dobj-11-8hky5j31 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfmgas-11-rxe0de59.1/nmdc_wfmgas-11-rxe0de59.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25278dea8043e4e93c34feeb80546796 nmdc:dobj-11-9jfysw84 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-12wp0s75.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rxe0de59.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a031ef800d3944471d3d6782101ec0cb -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-va7e6t58.1/nmdc_wfrbt-11-va7e6t58.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:162476593f47b974abed8ce3045019c3 nmdc:dobj-11-nn40f271 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:162476593f47b974abed8ce3045019c3 nmdc:dobj-11-5y7bwn89 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-va7e6t58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29166ae0141ed8cd69d0c41167fa08f3 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-va7e6t58.1/nmdc_wfrbt-11-va7e6t58.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29166ae0141ed8cd69d0c41167fa08f3 nmdc:dobj-11-sp097b17 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29166ae0141ed8cd69d0c41167fa08f3 nmdc:dobj-11-fxrmtz80 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-va7e6t58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:822af29d1242f2c85ef9d4a8cab092e6 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-va7e6t58.1/nmdc_wfrbt-11-va7e6t58.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:822af29d1242f2c85ef9d4a8cab092e6 nmdc:dobj-11-bp0j7448 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:822af29d1242f2c85ef9d4a8cab092e6 nmdc:dobj-11-m29fha68 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-va7e6t58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4dd729aa563fb2435cf90d336c704feb -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-va7e6t58.1/nmdc_wfrbt-11-va7e6t58.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd729aa563fb2435cf90d336c704feb nmdc:dobj-11-svnz6e09 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd729aa563fb2435cf90d336c704feb nmdc:dobj-11-b83q4049 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-va7e6t58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d0387c6fd51db156f588b6e5492456d -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-va7e6t58.1/nmdc_wfrbt-11-va7e6t58.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d0387c6fd51db156f588b6e5492456d nmdc:dobj-11-2tb58307 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d0387c6fd51db156f588b6e5492456d nmdc:dobj-11-zr3kz653 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-va7e6t58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2a68597495663a22ef71374ee86e8a8 -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-va7e6t58.1/nmdc_wfrbt-11-va7e6t58.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b34390db85bba4460ea4faa08f97c04 nmdc:dobj-11-rpejr426 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b34390db85bba4460ea4faa08f97c04 nmdc:dobj-11-gpr3e234 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-va7e6t58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ae3deb16284c899fb978d148f99109d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-va7e6t58.1/nmdc_wfrbt-11-va7e6t58.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ae3deb16284c899fb978d148f99109d nmdc:dobj-11-yws0hj20 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1akyc51/nmdc:wfrbt-11-e4pvys80.1/nmdc_wfrbt-11-e4pvys80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ae3deb16284c899fb978d148f99109d nmdc:dobj-11-qvzc7e27 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-f1akyc51 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-va7e6t58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e4pvys80.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:130829b30e6e2ed9ec9d701aeb3b88c0 -INFO:root:New file 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fdww0g83.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d6aaadb2e2d175ab3c39df88cabfa09 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrqc-11-kc5yqb52.1/nmdc_wfrqc-11-kc5yqb52.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d6aaadb2e2d175ab3c39df88cabfa09 nmdc:dobj-11-9xxq8388 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrqc-11-fdww0g83.1/nmdc_wfrqc-11-fdww0g83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d6aaadb2e2d175ab3c39df88cabfa09 nmdc:dobj-11-p0nyw897 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kc5yqb52.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-1p3kpm52.1/nmdc_wfmgas-11-1p3kpm52.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25c4ceed83baa63f12d5ac4af4fa152b nmdc:dobj-11-hqhsn749 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25c4ceed83baa63f12d5ac4af4fa152b nmdc:dobj-11-g03r1737 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1p3kpm52.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be4e193b9d5f0f997f8cf5981a471752 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-1p3kpm52.1/nmdc_wfmgas-11-1p3kpm52.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4e193b9d5f0f997f8cf5981a471752 nmdc:dobj-11-w7d4hk57 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4e193b9d5f0f997f8cf5981a471752 nmdc:dobj-11-8vzck767 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1p3kpm52.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:953439df7c2113735ce1d946f63f9db4 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-1p3kpm52.1/nmdc_wfmgas-11-1p3kpm52.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:953439df7c2113735ce1d946f63f9db4 nmdc:dobj-11-bsz25g51 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:953439df7c2113735ce1d946f63f9db4 nmdc:dobj-11-90hner35 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1p3kpm52.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9af680311b49916ce2fa1644b0cb28c -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-1p3kpm52.1/nmdc_wfmgas-11-1p3kpm52.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9af680311b49916ce2fa1644b0cb28c nmdc:dobj-11-5q0vcv24 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9af680311b49916ce2fa1644b0cb28c nmdc:dobj-11-a5hzf150 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1p3kpm52.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-1p3kpm52.1/nmdc_wfmgas-11-1p3kpm52.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 nmdc:dobj-11-41fst188 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfmgas-11-83njf168.1/nmdc_wfmgas-11-83njf168.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebf26e636bd4052cfd21b7bceda9a7a2 nmdc:dobj-11-rpemeq23 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1p3kpm52.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfmgas-11-1p3kpm52.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-83njf168.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4462a5c000ae58c1629af4d70479fd1c nmdc:dobj-11-e3b5s325 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4462a5c000ae58c1629af4d70479fd1c nmdc:dobj-11-pcqwmp69 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09e1ebdb7968df4fb2edad34247a0d96 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e1ebdb7968df4fb2edad34247a0d96 nmdc:dobj-11-hgw02j14 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e1ebdb7968df4fb2edad34247a0d96 nmdc:dobj-11-6apbcc15 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6af06e84011c8e29f130430051c04dbd -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6af06e84011c8e29f130430051c04dbd nmdc:dobj-11-m7r88e58 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6af06e84011c8e29f130430051c04dbd nmdc:dobj-11-q3xkq051 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b94e706067160a6a32ace49bce7c551 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b94e706067160a6a32ace49bce7c551 nmdc:dobj-11-sh89bw07 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b94e706067160a6a32ace49bce7c551 nmdc:dobj-11-ezsp6132 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b90c520abe9316e10946ec6d442f6479 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b90c520abe9316e10946ec6d442f6479 nmdc:dobj-11-9836n480 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b90c520abe9316e10946ec6d442f6479 nmdc:dobj-11-db2w3c76 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6642f00c83ce9b397f76195517358af6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6642f00c83ce9b397f76195517358af6 nmdc:dobj-11-wc7z1k06 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6642f00c83ce9b397f76195517358af6 nmdc:dobj-11-vz7vpf48 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bff2b6142843c3fd962381a3aa2f34cc -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff2b6142843c3fd962381a3aa2f34cc nmdc:dobj-11-0r3zva41 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff2b6142843c3fd962381a3aa2f34cc nmdc:dobj-11-7sseh535 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c18dba161515a95f936c89a7a2419d06 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c18dba161515a95f936c89a7a2419d06 nmdc:dobj-11-rqmfs152 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c18dba161515a95f936c89a7a2419d06 nmdc:dobj-11-05n4ze95 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ea276228373b27ff6b0928436e677bd -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-9v20ec43.1/nmdc_wfrbt-11-9v20ec43.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ea276228373b27ff6b0928436e677bd nmdc:dobj-11-jwaqyh84 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5nka4130/nmdc:wfrbt-11-89w89j58.1/nmdc_wfrbt-11-89w89j58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ea276228373b27ff6b0928436e677bd nmdc:dobj-11-r4bmgw75 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5nka4130 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9v20ec43.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfrbt-11-9v20ec43.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-89w89j58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9fc024d9e89eaa72cd0c8c0d86ff0396 nmdc:wfrbt-11-89w89j58.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5nka4130 INFO:root:omics_processing_id: nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef11b09bff6940ee45f3c05842b16931 nmdc:dobj-11-5d8zfk15 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef11b09bff6940ee45f3c05842b16931 nmdc:dobj-11-txr00q86 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-62am2h65 -INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-c99f1x15.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-c99f1x15.1 +INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vcrpkc87.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-vcrpkc87.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb2d873aa719f421d03c936238046918 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-c99f1x15.1/nmdc_wfrqc-11-c99f1x15.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb2d873aa719f421d03c936238046918 nmdc:dobj-11-36f95h90 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-vcrpkc87.1/nmdc_wfrqc-11-vcrpkc87.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb2d873aa719f421d03c936238046918 nmdc:dobj-11-nfqzd067 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-c99f1x15.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcrpkc87.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a425cd8c99687dfb287017ed35c0d5f -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-c99f1x15.1/nmdc_wfrqc-11-c99f1x15.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a425cd8c99687dfb287017ed35c0d5f nmdc:dobj-11-21mkbk85 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrqc-11-vcrpkc87.1/nmdc_wfrqc-11-vcrpkc87.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a425cd8c99687dfb287017ed35c0d5f nmdc:dobj-11-zyd0f655 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-c99f1x15.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfrqc-11-c99f1x15.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vcrpkc87.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfrqc-11-vcrpkc87.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-62am2h65 -INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-eanqk339.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-eanqk339.1 +INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3net6944.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53b133bcf15c8e42144ea221b0f0a887 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-eanqk339.1/nmdc_wfmgas-11-eanqk339.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53b133bcf15c8e42144ea221b0f0a887 nmdc:dobj-11-d21x7w75 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53b133bcf15c8e42144ea221b0f0a887 nmdc:dobj-11-078hy784 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eanqk339.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f863a250082e61048c2c78d8900ee674 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-eanqk339.1/nmdc_wfmgas-11-eanqk339.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f863a250082e61048c2c78d8900ee674 nmdc:dobj-11-8f2qvz72 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f863a250082e61048c2c78d8900ee674 nmdc:dobj-11-5x0g3412 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eanqk339.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84ed09ab11f6b16c4232d963b399047a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-eanqk339.1/nmdc_wfmgas-11-eanqk339.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84ed09ab11f6b16c4232d963b399047a nmdc:dobj-11-ams44w32 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84ed09ab11f6b16c4232d963b399047a nmdc:dobj-11-yzcym378 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eanqk339.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77d566d4876f42705d7d97da57b9e26a -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-eanqk339.1/nmdc_wfmgas-11-eanqk339.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77d566d4876f42705d7d97da57b9e26a nmdc:dobj-11-qmngtk36 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77d566d4876f42705d7d97da57b9e26a nmdc:dobj-11-0g6neg93 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eanqk339.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eeca0423df4faff401577c56437cb9f1 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-eanqk339.1/nmdc_wfmgas-11-eanqk339.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eeca0423df4faff401577c56437cb9f1 nmdc:dobj-11-72f4h962 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfmgas-11-3net6944.1/nmdc_wfmgas-11-3net6944.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eeca0423df4faff401577c56437cb9f1 nmdc:dobj-11-ey947e27 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-eanqk339.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfmgas-11-eanqk339.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3net6944.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfmgas-11-3net6944.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-62am2h65 -INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-b5yn7821.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1 +INFO:root:New activity id created for nmdc:omprc-11-62am2h65 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vvef1x51.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d nmdc:dobj-11-f06vt044 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a89e648bdd88f1dfbbceb6fddc6a0e0d nmdc:dobj-11-djry5173 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f27feac509e24df07ff22bf21e03d49a -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f27feac509e24df07ff22bf21e03d49a nmdc:dobj-11-286q4g12 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f27feac509e24df07ff22bf21e03d49a nmdc:dobj-11-j7s7ry36 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c67be157191bc733090db7c6e0ca0f89 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67be157191bc733090db7c6e0ca0f89 nmdc:dobj-11-9g803d66 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67be157191bc733090db7c6e0ca0f89 nmdc:dobj-11-5q825g70 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3244f8601e6d77b419152d05d7e836e -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3244f8601e6d77b419152d05d7e836e nmdc:dobj-11-xxcd2c04 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3244f8601e6d77b419152d05d7e836e nmdc:dobj-11-wxrfrc53 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ae8ca0ec9a1c84205038b854205e587 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ae8ca0ec9a1c84205038b854205e587 nmdc:dobj-11-1yxbw249 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ae8ca0ec9a1c84205038b854205e587 nmdc:dobj-11-d0hyzz52 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:01c99ba64519b8bd3c050b3d16706111 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01c99ba64519b8bd3c050b3d16706111 nmdc:dobj-11-bze3qf48 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01c99ba64519b8bd3c050b3d16706111 nmdc:dobj-11-ahnthw05 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:437020ba232579f82ea03b1c018456ca -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:437020ba232579f82ea03b1c018456ca nmdc:dobj-11-n9r54455 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:437020ba232579f82ea03b1c018456ca nmdc:dobj-11-2p3qna21 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82ea4c0739c7289dea24e6074e7fcd1c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82ea4c0739c7289dea24e6074e7fcd1c nmdc:dobj-11-j5c6av12 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82ea4c0739c7289dea24e6074e7fcd1c nmdc:dobj-11-dg6cff81 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f479aa0eca808c031de0d80b3a10a1a8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-b5yn7821.1/nmdc_wfrbt-11-b5yn7821.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f479aa0eca808c031de0d80b3a10a1a8 nmdc:dobj-11-fxdcp774 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-62am2h65/nmdc:wfrbt-11-vvef1x51.1/nmdc_wfrbt-11-vvef1x51.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f479aa0eca808c031de0d80b3a10a1a8 nmdc:dobj-11-9y4rgr55 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-62am2h65 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b5yn7821.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfrbt-11-b5yn7821.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vvef1x51.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1c43ab825d3f06cb62960dd6e7f2148a nmdc:wfrbt-11-vvef1x51.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-62am2h65 INFO:root:omics_processing_id: nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:426202d9528d4af01aa6aeeb6ebb5aac nmdc:dobj-11-ncpq9s23 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:426202d9528d4af01aa6aeeb6ebb5aac nmdc:dobj-11-7szs3g82 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8fpzs917 -INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0vvx9261.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-0vvx9261.1 +INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gx4r8664.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-gx4r8664.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db283cbf272ab654da9d4b6a450cc24f -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-0vvx9261.1/nmdc_wfrqc-11-0vvx9261.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db283cbf272ab654da9d4b6a450cc24f nmdc:dobj-11-dtkert61 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-gx4r8664.1/nmdc_wfrqc-11-gx4r8664.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db283cbf272ab654da9d4b6a450cc24f nmdc:dobj-11-pg21t302 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0vvx9261.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gx4r8664.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80e5b2e3a281d2fd69ca6b9ac99114be -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-0vvx9261.1/nmdc_wfrqc-11-0vvx9261.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80e5b2e3a281d2fd69ca6b9ac99114be nmdc:dobj-11-5q3fcs02 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrqc-11-gx4r8664.1/nmdc_wfrqc-11-gx4r8664.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80e5b2e3a281d2fd69ca6b9ac99114be nmdc:dobj-11-s9kr3v56 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0vvx9261.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6346585864f97f2e5caf5fc804127755 nmdc:wfrqc-11-0vvx9261.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-gx4r8664.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6346585864f97f2e5caf5fc804127755 nmdc:wfrqc-11-gx4r8664.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-8fpzs917 -INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6ff1bs60.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-6ff1bs60.1 +INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vqw0mq48.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-vqw0mq48.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cea51b509fbdb0b47b1351aa7902556 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-6ff1bs60.1/nmdc_wfmgas-11-6ff1bs60.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cea51b509fbdb0b47b1351aa7902556 nmdc:dobj-11-cc0hhc91 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-vqw0mq48.1/nmdc_wfmgas-11-vqw0mq48.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cea51b509fbdb0b47b1351aa7902556 nmdc:dobj-11-ffs0mp58 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ff1bs60.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqw0mq48.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:750738895197b7af52d0b664b3d72833 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-6ff1bs60.1/nmdc_wfmgas-11-6ff1bs60.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f23b9a9213b3710c256607ff37e46b45 nmdc:dobj-11-qrcp4f48 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-vqw0mq48.1/nmdc_wfmgas-11-vqw0mq48.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f23b9a9213b3710c256607ff37e46b45 nmdc:dobj-11-j78m3670 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ff1bs60.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqw0mq48.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:155dd13959c24094b25c32226d09a290 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-6ff1bs60.1/nmdc_wfmgas-11-6ff1bs60.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:155dd13959c24094b25c32226d09a290 nmdc:dobj-11-0f60h654 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-vqw0mq48.1/nmdc_wfmgas-11-vqw0mq48.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:155dd13959c24094b25c32226d09a290 nmdc:dobj-11-pm0ymb41 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ff1bs60.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqw0mq48.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:913a139c902a41261c89f8385317684a -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-6ff1bs60.1/nmdc_wfmgas-11-6ff1bs60.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:913a139c902a41261c89f8385317684a nmdc:dobj-11-89n8zz51 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfmgas-11-vqw0mq48.1/nmdc_wfmgas-11-vqw0mq48.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:913a139c902a41261c89f8385317684a nmdc:dobj-11-kn5c7v26 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ff1bs60.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6346585864f97f2e5caf5fc804127755 nmdc:wfmgas-11-6ff1bs60.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqw0mq48.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6346585864f97f2e5caf5fc804127755 nmdc:wfmgas-11-vqw0mq48.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-8fpzs917 -INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-79yafn27.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1 +INFO:root:New activity id created for nmdc:omprc-11-8fpzs917 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2t3hda40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0946444733dadcf9dcbe7b234f53bf6b -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0946444733dadcf9dcbe7b234f53bf6b nmdc:dobj-11-dk7p8924 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0946444733dadcf9dcbe7b234f53bf6b nmdc:dobj-11-28383678 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 nmdc:dobj-11-b4f2xd83 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff1da482f9df3ed0ebddb51ee2558fd3 nmdc:dobj-11-hf94tj31 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e66471eceb4c3421297919501d04899 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e66471eceb4c3421297919501d04899 nmdc:dobj-11-ryte6q36 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e66471eceb4c3421297919501d04899 nmdc:dobj-11-cpxr1g24 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b76d37c44c22589af96491cb4ef021d8 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b76d37c44c22589af96491cb4ef021d8 nmdc:dobj-11-r4ck0r93 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b76d37c44c22589af96491cb4ef021d8 nmdc:dobj-11-wrkg2598 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e40ea1e272be59efcf7007c46382d25e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e40ea1e272be59efcf7007c46382d25e nmdc:dobj-11-jr5mtc92 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e40ea1e272be59efcf7007c46382d25e nmdc:dobj-11-xz5mzq04 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:940fbc40a8aee0384534b966348b39ea -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:940fbc40a8aee0384534b966348b39ea nmdc:dobj-11-f6q7w410 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:940fbc40a8aee0384534b966348b39ea nmdc:dobj-11-g5y8d926 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75927a7b9e0d5d95b95adfd04ff185dd -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75927a7b9e0d5d95b95adfd04ff185dd nmdc:dobj-11-j23vry63 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75927a7b9e0d5d95b95adfd04ff185dd nmdc:dobj-11-4t77cf29 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab2e59e3e053a742e13724228318b735 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab2e59e3e053a742e13724228318b735 nmdc:dobj-11-kx7z2j38 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab2e59e3e053a742e13724228318b735 nmdc:dobj-11-y96qr036 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1cd2425ac0e185206fda36d3ddd2f2a -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-79yafn27.1/nmdc_wfrbt-11-79yafn27.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1cd2425ac0e185206fda36d3ddd2f2a nmdc:dobj-11-fk0emt42 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8fpzs917/nmdc:wfrbt-11-2t3hda40.1/nmdc_wfrbt-11-2t3hda40.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1cd2425ac0e185206fda36d3ddd2f2a nmdc:dobj-11-pwtrc067 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-8fpzs917 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-79yafn27.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6346585864f97f2e5caf5fc804127755 nmdc:wfrbt-11-79yafn27.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2t3hda40.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6346585864f97f2e5caf5fc804127755 nmdc:wfrbt-11-2t3hda40.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8fpzs917 INFO:root:omics_processing_id: nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d18ad58ac8a0a7e9748c518081f9059d nmdc:dobj-11-6e8m7n25 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d18ad58ac8a0a7e9748c518081f9059d nmdc:dobj-11-v5v8wj15 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gvyfjg32 -INFO:root:New activity id created for nmdc:omprc-11-gvyfjg32 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mzd6ht08.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrqc-11-mzd6ht08.1 +INFO:root:New activity id created for nmdc:omprc-11-gvyfjg32 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-r6fnd465.1 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-nfeq5869.1/nmdc_wfmgas-11-nfeq5869.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e34c2e87918fb623b2a7661cf36bfa7 nmdc:dobj-11-xsd66k83 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e34c2e87918fb623b2a7661cf36bfa7 nmdc:dobj-11-jm5a4b19 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nfeq5869.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d39cd00c78689bfe7a71d5ab1d85a488 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-nfeq5869.1/nmdc_wfmgas-11-nfeq5869.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d39cd00c78689bfe7a71d5ab1d85a488 nmdc:dobj-11-1ayqpv87 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d39cd00c78689bfe7a71d5ab1d85a488 nmdc:dobj-11-ptrfz890 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nfeq5869.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a21eb2b65627b5942c35010f6ff62ba6 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-nfeq5869.1/nmdc_wfmgas-11-nfeq5869.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a21eb2b65627b5942c35010f6ff62ba6 nmdc:dobj-11-dp7ajd69 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a21eb2b65627b5942c35010f6ff62ba6 nmdc:dobj-11-2vqy6377 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nfeq5869.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3a4775e54eb99509f2d35314cf68705 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-nfeq5869.1/nmdc_wfmgas-11-nfeq5869.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3a4775e54eb99509f2d35314cf68705 nmdc:dobj-11-7t7ka474 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3a4775e54eb99509f2d35314cf68705 nmdc:dobj-11-xs0dew71 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nfeq5869.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ba2fa1136c55203072ea2538980ddd6 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-nfeq5869.1/nmdc_wfmgas-11-nfeq5869.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ba2fa1136c55203072ea2538980ddd6 nmdc:dobj-11-84bt6r76 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfmgas-11-e5205x21.1/nmdc_wfmgas-11-e5205x21.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ba2fa1136c55203072ea2538980ddd6 nmdc:dobj-11-h52nh907 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nfeq5869.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:7bcab96677bf2080a446277c21fce249 nmdc:wfmgas-11-nfeq5869.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e5205x21.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26af6a9cfbc59c380be916b7dd9ec66c nmdc:dobj-11-bc2dxh62 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26af6a9cfbc59c380be916b7dd9ec66c nmdc:dobj-11-4x6ht009 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:391138258e22a253a52fe8beb1e53eca -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:391138258e22a253a52fe8beb1e53eca nmdc:dobj-11-psm1ex43 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:391138258e22a253a52fe8beb1e53eca nmdc:dobj-11-4cnadj58 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1a8f51847736cf459e75e2414a0066d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1a8f51847736cf459e75e2414a0066d nmdc:dobj-11-42r9eg84 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1a8f51847736cf459e75e2414a0066d nmdc:dobj-11-vhdgr998 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51e9e7947025802ac2ef249e475c640f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e9e7947025802ac2ef249e475c640f nmdc:dobj-11-pqtcm072 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e9e7947025802ac2ef249e475c640f nmdc:dobj-11-es9j0q46 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed nmdc:dobj-11-dp24ra10 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89cb6de5af7f8b1bc4b7793fa928e2ed nmdc:dobj-11-9vmnh465 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5aa266e817720ff47d7aa850c818715 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5aa266e817720ff47d7aa850c818715 nmdc:dobj-11-cbh5wn45 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5aa266e817720ff47d7aa850c818715 nmdc:dobj-11-hxw7yf41 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f15ff004d666aec8af98763c326c38a -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f15ff004d666aec8af98763c326c38a nmdc:dobj-11-gnqp1a84 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f15ff004d666aec8af98763c326c38a nmdc:dobj-11-wc4ms834 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2014e8a59067392e7354a0f01fafd6d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2014e8a59067392e7354a0f01fafd6d nmdc:dobj-11-389v8166 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2014e8a59067392e7354a0f01fafd6d nmdc:dobj-11-j59t3a49 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac6d3b9fa77d411df771712fa82fdd9a -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-z7js8580.1/nmdc_wfrbt-11-z7js8580.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac6d3b9fa77d411df771712fa82fdd9a nmdc:dobj-11-q4qn0h87 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gvyfjg32/nmdc:wfrbt-11-wtfny728.1/nmdc_wfrbt-11-wtfny728.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac6d3b9fa77d411df771712fa82fdd9a nmdc:dobj-11-m1vtc174 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gvyfjg32 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z7js8580.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7bcab96677bf2080a446277c21fce249 nmdc:wfrbt-11-z7js8580.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wtfny728.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7bcab96677bf2080a446277c21fce249 nmdc:wfrbt-11-wtfny728.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gvyfjg32 INFO:root:omics_processing_id: nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:104c9da6da3a685e5b1b8a3b2652bdd7 nmdc:dobj-11-d1kg7g06 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:104c9da6da3a685e5b1b8a3b2652bdd7 nmdc:dobj-11-nv619g55 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-abadtt88 -INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-je7xka85.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-je7xka85.1 +INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cwyx8p22.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-cwyx8p22.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93c11e5c022730d2f3ba2b237abe5eac -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-je7xka85.1/nmdc_wfrqc-11-je7xka85.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93c11e5c022730d2f3ba2b237abe5eac nmdc:dobj-11-ftjtfe42 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-cwyx8p22.1/nmdc_wfrqc-11-cwyx8p22.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93c11e5c022730d2f3ba2b237abe5eac nmdc:dobj-11-k1nah598 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-je7xka85.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cwyx8p22.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37a9c8f31c8240c7a72233e33724dc18 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-je7xka85.1/nmdc_wfrqc-11-je7xka85.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37a9c8f31c8240c7a72233e33724dc18 nmdc:dobj-11-52kwbb52 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrqc-11-cwyx8p22.1/nmdc_wfrqc-11-cwyx8p22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37a9c8f31c8240c7a72233e33724dc18 nmdc:dobj-11-zwfc2c67 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-je7xka85.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fd67e63fb2596a761f6fa7b37a2f7d29 nmdc:wfrqc-11-je7xka85.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cwyx8p22.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fd67e63fb2596a761f6fa7b37a2f7d29 nmdc:wfrqc-11-cwyx8p22.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-abadtt88 -INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-mdg9kx98.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-mdg9kx98.1 +INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yjmr1z61.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d1f4d18d08b33b08f872807f17d8ec8 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-mdg9kx98.1/nmdc_wfmgas-11-mdg9kx98.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d1f4d18d08b33b08f872807f17d8ec8 nmdc:dobj-11-vkzxhk55 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d1f4d18d08b33b08f872807f17d8ec8 nmdc:dobj-11-en24bf06 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mdg9kx98.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cad82a7e34092c6206773536c52107f5 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-mdg9kx98.1/nmdc_wfmgas-11-mdg9kx98.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cad82a7e34092c6206773536c52107f5 nmdc:dobj-11-97csv240 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cad82a7e34092c6206773536c52107f5 nmdc:dobj-11-6whab006 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mdg9kx98.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a9d4f0be1f4e5b57e5b59592b496e5ee -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-mdg9kx98.1/nmdc_wfmgas-11-mdg9kx98.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9d4f0be1f4e5b57e5b59592b496e5ee nmdc:dobj-11-namcjs93 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9d4f0be1f4e5b57e5b59592b496e5ee nmdc:dobj-11-fr7wb362 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mdg9kx98.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdaf545aa50d1180aaee1ea6b325dce3 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-mdg9kx98.1/nmdc_wfmgas-11-mdg9kx98.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdaf545aa50d1180aaee1ea6b325dce3 nmdc:dobj-11-jyyvte97 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdaf545aa50d1180aaee1ea6b325dce3 nmdc:dobj-11-5db0xh78 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mdg9kx98.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6316e96b726e8d5e4782ea3c654ef37d -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-mdg9kx98.1/nmdc_wfmgas-11-mdg9kx98.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6316e96b726e8d5e4782ea3c654ef37d nmdc:dobj-11-1hxzc040 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfmgas-11-yjmr1z61.1/nmdc_wfmgas-11-yjmr1z61.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6316e96b726e8d5e4782ea3c654ef37d nmdc:dobj-11-f649yx42 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mdg9kx98.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:fd67e63fb2596a761f6fa7b37a2f7d29 nmdc:wfmgas-11-mdg9kx98.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yjmr1z61.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:fd67e63fb2596a761f6fa7b37a2f7d29 nmdc:wfmgas-11-yjmr1z61.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-abadtt88 -INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qmcs2a35.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1 +INFO:root:New activity id created for nmdc:omprc-11-abadtt88 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-030rqn93.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd89f6fb8c30f35040400d527117f7c1 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd89f6fb8c30f35040400d527117f7c1 nmdc:dobj-11-5yt1ka43 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd89f6fb8c30f35040400d527117f7c1 nmdc:dobj-11-49js1s09 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:20d68f36daa6167687d12cd0558598ce -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20d68f36daa6167687d12cd0558598ce nmdc:dobj-11-5mdg8b84 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20d68f36daa6167687d12cd0558598ce nmdc:dobj-11-jr76g942 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1584c99826b72d31e550a09dc839ce89 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1584c99826b72d31e550a09dc839ce89 nmdc:dobj-11-tqtvny02 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1584c99826b72d31e550a09dc839ce89 nmdc:dobj-11-vrw49p53 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c3f084c4224500fb67a6fe44053e0cd -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c3f084c4224500fb67a6fe44053e0cd nmdc:dobj-11-c8j9g138 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c3f084c4224500fb67a6fe44053e0cd nmdc:dobj-11-x1nanv96 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4994d80507dc9b4b366debef805d2227 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4994d80507dc9b4b366debef805d2227 nmdc:dobj-11-pkbw2k62 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4994d80507dc9b4b366debef805d2227 nmdc:dobj-11-arj0xq76 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e76e3bfb17589a0396f0071b6488226a -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e76e3bfb17589a0396f0071b6488226a nmdc:dobj-11-pnnksd28 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e76e3bfb17589a0396f0071b6488226a nmdc:dobj-11-t0tsad04 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66a58407634a85b137a22d9b245db41a -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66a58407634a85b137a22d9b245db41a nmdc:dobj-11-k1we9z33 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66a58407634a85b137a22d9b245db41a nmdc:dobj-11-0tdpeg32 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:986051bcc64e9d19435bc2c56ccdfb98 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:986051bcc64e9d19435bc2c56ccdfb98 nmdc:dobj-11-2p7d3m63 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:986051bcc64e9d19435bc2c56ccdfb98 nmdc:dobj-11-mtqtyv27 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3816b59147b769cddc7c1d514011294 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-qmcs2a35.1/nmdc_wfrbt-11-qmcs2a35.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3816b59147b769cddc7c1d514011294 nmdc:dobj-11-wy3ppv48 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abadtt88/nmdc:wfrbt-11-030rqn93.1/nmdc_wfrbt-11-030rqn93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3816b59147b769cddc7c1d514011294 nmdc:dobj-11-0fnnjk43 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-abadtt88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qmcs2a35.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fd67e63fb2596a761f6fa7b37a2f7d29 nmdc:wfrbt-11-qmcs2a35.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-030rqn93.1_kraken2_krona.html 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nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfrqc-11-z5sf7p25.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vp1vvc94.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfrqc-11-vp1vvc94.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-kj0jpg50 -INFO:root:New activity id created for nmdc:omprc-11-kj0jpg50 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6pffjj22.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-6pffjj22.1 +INFO:root:New activity id created for nmdc:omprc-11-kj0jpg50 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-kbgj3002.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-kbgj3002.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:286c42ec768a906520c8871398acd7c9 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-6pffjj22.1/nmdc_wfmgas-11-6pffjj22.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:286c42ec768a906520c8871398acd7c9 nmdc:dobj-11-3pyjte57 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-kbgj3002.1/nmdc_wfmgas-11-kbgj3002.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:286c42ec768a906520c8871398acd7c9 nmdc:dobj-11-re890613 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6pffjj22.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kbgj3002.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5c6a425fbebdc920fd61001ea4aab22 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-6pffjj22.1/nmdc_wfmgas-11-6pffjj22.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4040fb85b92c4c72d37b16e70e999715 nmdc:dobj-11-taaz2p87 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-kbgj3002.1/nmdc_wfmgas-11-kbgj3002.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4040fb85b92c4c72d37b16e70e999715 nmdc:dobj-11-qmnwyb60 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6pffjj22.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kbgj3002.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-6pffjj22.1/nmdc_wfmgas-11-6pffjj22.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 nmdc:dobj-11-6k7kty35 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfmgas-11-kbgj3002.1/nmdc_wfmgas-11-kbgj3002.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99ed44ccafbe3dfcdeb762d4ea1d3450 nmdc:dobj-11-fbemk920 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6pffjj22.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfmgas-11-6pffjj22.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kbgj3002.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfmgas-11-kbgj3002.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-kj0jpg50 -INFO:root:New activity id created for nmdc:omprc-11-kj0jpg50 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-pz8m6y78.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1 +INFO:root:New activity id created for nmdc:omprc-11-kj0jpg50 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-d6nsxe49.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f64b6d9493bff8fcf83f3f914df1b61 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f64b6d9493bff8fcf83f3f914df1b61 nmdc:dobj-11-wzc12k42 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f64b6d9493bff8fcf83f3f914df1b61 nmdc:dobj-11-hmc4k344 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9147a83cc015cf896a7c1684dcb9bf8 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9147a83cc015cf896a7c1684dcb9bf8 nmdc:dobj-11-0zmdnd48 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9147a83cc015cf896a7c1684dcb9bf8 nmdc:dobj-11-n89sgp55 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee2d6a7c74af6e4c124c606400bd8306 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee2d6a7c74af6e4c124c606400bd8306 nmdc:dobj-11-rhf6a269 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee2d6a7c74af6e4c124c606400bd8306 nmdc:dobj-11-76tvrx06 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:754cc6e6046f9ee4ac2324974bdffa1c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754cc6e6046f9ee4ac2324974bdffa1c nmdc:dobj-11-ee7hkd56 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754cc6e6046f9ee4ac2324974bdffa1c nmdc:dobj-11-cq4zmg63 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd24a4640ef629e255fe4af0353e68fd -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd24a4640ef629e255fe4af0353e68fd nmdc:dobj-11-c9xg7541 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd24a4640ef629e255fe4af0353e68fd nmdc:dobj-11-wkjr2g66 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4454244aa8d4e5c886cb839780defef2 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4454244aa8d4e5c886cb839780defef2 nmdc:dobj-11-btccbj06 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4454244aa8d4e5c886cb839780defef2 nmdc:dobj-11-gmq47m84 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a391da88c8bcd5eeeeabbe417ae83572 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a391da88c8bcd5eeeeabbe417ae83572 nmdc:dobj-11-bf3g8z95 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a391da88c8bcd5eeeeabbe417ae83572 nmdc:dobj-11-vfx8c951 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:986a43b1309ea630dcef137d7d41a8de -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:986a43b1309ea630dcef137d7d41a8de nmdc:dobj-11-kr2n2v93 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:986a43b1309ea630dcef137d7d41a8de nmdc:dobj-11-24tyd087 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:455254de6b416946e7433a1fe2c00932 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-pz8m6y78.1/nmdc_wfrbt-11-pz8m6y78.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:455254de6b416946e7433a1fe2c00932 nmdc:dobj-11-2n666k03 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kj0jpg50/nmdc:wfrbt-11-d6nsxe49.1/nmdc_wfrbt-11-d6nsxe49.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:455254de6b416946e7433a1fe2c00932 nmdc:dobj-11-af1jwz65 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-kj0jpg50 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pz8m6y78.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfrbt-11-pz8m6y78.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d6nsxe49.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d305fa6e01ef8d3dd28a0e79cd30709c nmdc:wfrbt-11-d6nsxe49.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-kj0jpg50 INFO:root:omics_processing_id: nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8656757191fe5a86d3a4d524d5f513e2 nmdc:dobj-11-f39pq862 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8656757191fe5a86d3a4d524d5f513e2 nmdc:dobj-11-t9c2n825 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-2rmac411 -INFO:root:New activity id created for nmdc:omprc-11-2rmac411 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-26b8wq35.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrqc-11-26b8wq35.1 +INFO:root:New activity id created for nmdc:omprc-11-2rmac411 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mssv5e05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrqc-11-mssv5e05.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5cd85e058b666afe786f94296b3bb87 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrqc-11-26b8wq35.1/nmdc_wfrqc-11-26b8wq35.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5cd85e058b666afe786f94296b3bb87 nmdc:dobj-11-y527h246 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrqc-11-mssv5e05.1/nmdc_wfrqc-11-mssv5e05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5cd85e058b666afe786f94296b3bb87 nmdc:dobj-11-8h5q8w91 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-26b8wq35.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mssv5e05.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a5517ea860e0f63d1bb09fa7a26896c -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrqc-11-26b8wq35.1/nmdc_wfrqc-11-26b8wq35.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a5517ea860e0f63d1bb09fa7a26896c nmdc:dobj-11-p6xadp15 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrqc-11-mssv5e05.1/nmdc_wfrqc-11-mssv5e05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a5517ea860e0f63d1bb09fa7a26896c nmdc:dobj-11-wtkjha29 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-26b8wq35.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:26b621b903f185d49d6b7fb9ac0ca9f7 nmdc:wfrqc-11-26b8wq35.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mssv5e05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:26b621b903f185d49d6b7fb9ac0ca9f7 nmdc:wfrqc-11-mssv5e05.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-2rmac411 -INFO:root:New activity id created for nmdc:omprc-11-2rmac411 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wshnaz62.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-wshnaz62.1 +INFO:root:New activity id created for nmdc:omprc-11-2rmac411 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xn923d20.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa10ae73ca177f92ae50c5311ee16e09 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-wshnaz62.1/nmdc_wfmgas-11-wshnaz62.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa10ae73ca177f92ae50c5311ee16e09 nmdc:dobj-11-2w8bss49 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa10ae73ca177f92ae50c5311ee16e09 nmdc:dobj-11-k6e0h004 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wshnaz62.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1667f3a9d5ad4f2a008aa1a8220834b0 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-wshnaz62.1/nmdc_wfmgas-11-wshnaz62.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1667f3a9d5ad4f2a008aa1a8220834b0 nmdc:dobj-11-j41faf51 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1667f3a9d5ad4f2a008aa1a8220834b0 nmdc:dobj-11-a5err258 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wshnaz62.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d4a4ff4f1d5cfda922057876ea6a0a00 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-wshnaz62.1/nmdc_wfmgas-11-wshnaz62.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4a4ff4f1d5cfda922057876ea6a0a00 nmdc:dobj-11-bk1pdz15 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4a4ff4f1d5cfda922057876ea6a0a00 nmdc:dobj-11-54781206 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wshnaz62.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:979a9e14085b248d091116ebf844d431 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-wshnaz62.1/nmdc_wfmgas-11-wshnaz62.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:979a9e14085b248d091116ebf844d431 nmdc:dobj-11-wj85b836 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:979a9e14085b248d091116ebf844d431 nmdc:dobj-11-rj4c2326 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wshnaz62.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bf1a3c10d2c70f0b2e80318d69e31b6 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-wshnaz62.1/nmdc_wfmgas-11-wshnaz62.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bf1a3c10d2c70f0b2e80318d69e31b6 nmdc:dobj-11-g98etv81 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfmgas-11-xn923d20.1/nmdc_wfmgas-11-xn923d20.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bf1a3c10d2c70f0b2e80318d69e31b6 nmdc:dobj-11-ctkxsc93 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wshnaz62.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:26b621b903f185d49d6b7fb9ac0ca9f7 nmdc:wfmgas-11-wshnaz62.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xn923d20.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:26b621b903f185d49d6b7fb9ac0ca9f7 nmdc:wfmgas-11-xn923d20.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-2rmac411 -INFO:root:New activity id created for nmdc:omprc-11-2rmac411 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gqfvem50.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1 +INFO:root:New activity id created for nmdc:omprc-11-2rmac411 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qr8feb18.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d153a1e250bf419cf54bbe9c0be1fff6 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d153a1e250bf419cf54bbe9c0be1fff6 nmdc:dobj-11-5fy17e20 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d153a1e250bf419cf54bbe9c0be1fff6 nmdc:dobj-11-1vxqqf55 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42c66b9d55f81a9ccb6a49209bca21b4 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42c66b9d55f81a9ccb6a49209bca21b4 nmdc:dobj-11-9tgajv29 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42c66b9d55f81a9ccb6a49209bca21b4 nmdc:dobj-11-31w1a682 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e637ad8e302e53d4191c27a26e6b24f3 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e637ad8e302e53d4191c27a26e6b24f3 nmdc:dobj-11-jhqvdk22 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e637ad8e302e53d4191c27a26e6b24f3 nmdc:dobj-11-smmdhv59 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31eecb6142eb5975e9f7302e9716c750 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31eecb6142eb5975e9f7302e9716c750 nmdc:dobj-11-64k6sp75 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31eecb6142eb5975e9f7302e9716c750 nmdc:dobj-11-8y462986 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:01a13a8c760eed71143cfb44f4897c1b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01a13a8c760eed71143cfb44f4897c1b nmdc:dobj-11-m2gy1y74 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01a13a8c760eed71143cfb44f4897c1b nmdc:dobj-11-w9y3a957 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1649191c4fa6b979559061a3f7ac3da7 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1649191c4fa6b979559061a3f7ac3da7 nmdc:dobj-11-fectbg21 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1649191c4fa6b979559061a3f7ac3da7 nmdc:dobj-11-2q71tk75 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 nmdc:dobj-11-dr7qdq26 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7661aaf3d8652ca345d6dc3f180b2f6 nmdc:dobj-11-aa3gkm29 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcffa09dd745360a48fa17257f9859fa -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcffa09dd745360a48fa17257f9859fa nmdc:dobj-11-nppw2s93 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcffa09dd745360a48fa17257f9859fa nmdc:dobj-11-jt4mpq62 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bc2050ad81b78baaf626aeca22d55ccf -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-gqfvem50.1/nmdc_wfrbt-11-gqfvem50.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bc2050ad81b78baaf626aeca22d55ccf nmdc:dobj-11-kjg7hd81 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2rmac411/nmdc:wfrbt-11-qr8feb18.1/nmdc_wfrbt-11-qr8feb18.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bc2050ad81b78baaf626aeca22d55ccf nmdc:dobj-11-pw1fd952 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-2rmac411 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gqfvem50.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:26b621b903f185d49d6b7fb9ac0ca9f7 nmdc:wfrbt-11-gqfvem50.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qr8feb18.1_kraken2_krona.html 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-d9vfj903.1/nmdc_wfmgas-11-d9vfj903.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae1d558356ea6581b2d74b22ea2e1fff nmdc:dobj-11-3yfjwy27 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfmgas-11-8cc30c56.1/nmdc_wfmgas-11-8cc30c56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae1d558356ea6581b2d74b22ea2e1fff nmdc:dobj-11-w2jyh045 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d9vfj903.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8cc30c56.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ae32293769ba42f0691f7f2de1d26a8 -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-jq5xsn79.1/nmdc_wfrbt-11-jq5xsn79.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:806dbb35c8025db29d569c758ddb2115 nmdc:dobj-11-q5yht105 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:806dbb35c8025db29d569c758ddb2115 nmdc:dobj-11-jc4awx79 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jq5xsn79.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:395441e566a48a7f3fd7661e02c39b46 -INFO:root:New file path computed for GOTTCHA2 Report Full: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-jq5xsn79.1/nmdc_wfrbt-11-jq5xsn79.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:570a1044d48814b42fc253d610b8675d nmdc:dobj-11-q0b3x858 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:570a1044d48814b42fc253d610b8675d nmdc:dobj-11-gmrmcv52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jq5xsn79.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0abce45e3702eb3f6fcad6cd6de93965 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-jq5xsn79.1/nmdc_wfrbt-11-jq5xsn79.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0abce45e3702eb3f6fcad6cd6de93965 nmdc:dobj-11-v0njfc09 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0abce45e3702eb3f6fcad6cd6de93965 nmdc:dobj-11-mz76pj04 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jq5xsn79.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0eac886070886288d61760a4ef91b9f3 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-jq5xsn79.1/nmdc_wfrbt-11-jq5xsn79.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0eac886070886288d61760a4ef91b9f3 nmdc:dobj-11-e03etc06 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0eac886070886288d61760a4ef91b9f3 nmdc:dobj-11-cs6r3815 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jq5xsn79.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b368068e335e30cecd46034a93680db -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-jq5xsn79.1/nmdc_wfrbt-11-jq5xsn79.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b368068e335e30cecd46034a93680db nmdc:dobj-11-wb95ez53 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b368068e335e30cecd46034a93680db nmdc:dobj-11-wbd6j010 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jq5xsn79.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23dcdd951428db0e7ac83047307c04c2 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-jq5xsn79.1/nmdc_wfrbt-11-jq5xsn79.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23dcdd951428db0e7ac83047307c04c2 nmdc:dobj-11-mhfgb954 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23dcdd951428db0e7ac83047307c04c2 nmdc:dobj-11-da5a0489 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jq5xsn79.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebdd87b9c03afcd3253386926942a3d7 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-jq5xsn79.1/nmdc_wfrbt-11-jq5xsn79.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebdd87b9c03afcd3253386926942a3d7 nmdc:dobj-11-v2egb242 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebdd87b9c03afcd3253386926942a3d7 nmdc:dobj-11-95c5jj58 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jq5xsn79.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae85c806846b65e5179dfc5c4e593df8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-jq5xsn79.1/nmdc_wfrbt-11-jq5xsn79.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae85c806846b65e5179dfc5c4e593df8 nmdc:dobj-11-b076kp08 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-sq1snj73/nmdc:wfrbt-11-5vkzz333.1/nmdc_wfrbt-11-5vkzz333.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae85c806846b65e5179dfc5c4e593df8 nmdc:dobj-11-cts84633 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-sq1snj73 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jq5xsn79.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c611f0dc7da6977e866733830181b8c2 nmdc:wfrbt-11-jq5xsn79.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5vkzz333.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c611f0dc7da6977e866733830181b8c2 nmdc:wfrbt-11-5vkzz333.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-sq1snj73 INFO:root:omics_processing_id: nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65b3ee1c8092cfe1b7fef18cbca970d9 nmdc:dobj-11-cja29v87 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65b3ee1c8092cfe1b7fef18cbca970d9 nmdc:dobj-11-jr33dp76 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-vwvc8h03 -INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-00m69v37.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-00m69v37.1 +INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-p6kxdx62.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-p6kxdx62.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0096101fe9ef52d6d21a0e053133ca2f -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-00m69v37.1/nmdc_wfrqc-11-00m69v37.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0096101fe9ef52d6d21a0e053133ca2f nmdc:dobj-11-58253449 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-p6kxdx62.1/nmdc_wfrqc-11-p6kxdx62.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0096101fe9ef52d6d21a0e053133ca2f nmdc:dobj-11-yvfkjn98 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-00m69v37.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p6kxdx62.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7808998d6af494523d5dbc2d272df8a6 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-00m69v37.1/nmdc_wfrqc-11-00m69v37.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7808998d6af494523d5dbc2d272df8a6 nmdc:dobj-11-1c4nxh75 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrqc-11-p6kxdx62.1/nmdc_wfrqc-11-p6kxdx62.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7808998d6af494523d5dbc2d272df8a6 nmdc:dobj-11-0he17n39 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-00m69v37.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfrqc-11-00m69v37.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p6kxdx62.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfrqc-11-p6kxdx62.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-vwvc8h03 -INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7kj3vf72.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-7kj3vf72.1 +INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8nbk9d67.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb39be00f9eca4c319d460e7320a910c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-7kj3vf72.1/nmdc_wfmgas-11-7kj3vf72.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb39be00f9eca4c319d460e7320a910c nmdc:dobj-11-24azf906 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb39be00f9eca4c319d460e7320a910c nmdc:dobj-11-xc3rna07 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kj3vf72.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:186f97d21b303ee5d33e8476c1e8a511 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-7kj3vf72.1/nmdc_wfmgas-11-7kj3vf72.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:186f97d21b303ee5d33e8476c1e8a511 nmdc:dobj-11-pj6xgp41 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:186f97d21b303ee5d33e8476c1e8a511 nmdc:dobj-11-f4wsm508 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kj3vf72.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bff87179b7c0e0c8b1b61c97b0936524 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-7kj3vf72.1/nmdc_wfmgas-11-7kj3vf72.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff87179b7c0e0c8b1b61c97b0936524 nmdc:dobj-11-0cfzn832 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff87179b7c0e0c8b1b61c97b0936524 nmdc:dobj-11-5d56tj37 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kj3vf72.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:600b6d34f1148edee4418ab9a2e2b6c8 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-7kj3vf72.1/nmdc_wfmgas-11-7kj3vf72.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:600b6d34f1148edee4418ab9a2e2b6c8 nmdc:dobj-11-7kzwwb35 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:600b6d34f1148edee4418ab9a2e2b6c8 nmdc:dobj-11-rkj14229 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kj3vf72.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:245bd47165e85215955550b566497026 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-7kj3vf72.1/nmdc_wfmgas-11-7kj3vf72.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:245bd47165e85215955550b566497026 nmdc:dobj-11-45p85p57 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfmgas-11-8nbk9d67.1/nmdc_wfmgas-11-8nbk9d67.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:245bd47165e85215955550b566497026 nmdc:dobj-11-qtve7c93 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7kj3vf72.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfmgas-11-7kj3vf72.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8nbk9d67.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfmgas-11-8nbk9d67.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-vwvc8h03 -INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-nr7yjy88.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1 +INFO:root:New activity id created for nmdc:omprc-11-vwvc8h03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-v5ayb614.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:49c4b6496f7f81baadb792cc334276c1 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49c4b6496f7f81baadb792cc334276c1 nmdc:dobj-11-p6xkza66 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49c4b6496f7f81baadb792cc334276c1 nmdc:dobj-11-j609z126 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3e0be12cb5ac87419db27de68ec2954 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3e0be12cb5ac87419db27de68ec2954 nmdc:dobj-11-w2ag9n64 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3e0be12cb5ac87419db27de68ec2954 nmdc:dobj-11-712hx512 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86b04c033ff5adda542213f73b767aa7 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86b04c033ff5adda542213f73b767aa7 nmdc:dobj-11-0tnk0e69 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86b04c033ff5adda542213f73b767aa7 nmdc:dobj-11-4wc69079 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86979a02b7368694226c22c70adee6fe -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86979a02b7368694226c22c70adee6fe nmdc:dobj-11-jrxfhf46 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86979a02b7368694226c22c70adee6fe nmdc:dobj-11-ap3s0z49 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 nmdc:dobj-11-4a590g64 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3900ee900cebf1ae2b17c9e8af8f80f5 nmdc:dobj-11-4hgxxz89 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6904bdc7513848f636a48c9e979fadd7 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6904bdc7513848f636a48c9e979fadd7 nmdc:dobj-11-5a0a2f31 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6904bdc7513848f636a48c9e979fadd7 nmdc:dobj-11-wnpnhz23 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:06089a2dd871efdb75a5f20c40bd1ad8 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06089a2dd871efdb75a5f20c40bd1ad8 nmdc:dobj-11-0qt35219 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06089a2dd871efdb75a5f20c40bd1ad8 nmdc:dobj-11-wbe44n20 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c989dce0710ad2c74636dc714bd61cfd -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c989dce0710ad2c74636dc714bd61cfd nmdc:dobj-11-zm8bdv58 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c989dce0710ad2c74636dc714bd61cfd nmdc:dobj-11-nntajv52 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cef21d5fe576d361833aa3df98d4b436 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-nr7yjy88.1/nmdc_wfrbt-11-nr7yjy88.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cef21d5fe576d361833aa3df98d4b436 nmdc:dobj-11-a5whme65 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vwvc8h03/nmdc:wfrbt-11-v5ayb614.1/nmdc_wfrbt-11-v5ayb614.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cef21d5fe576d361833aa3df98d4b436 nmdc:dobj-11-mq23h607 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-vwvc8h03 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nr7yjy88.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfrbt-11-nr7yjy88.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-v5ayb614.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a2f241b757770afdc17c5f9ec03b1d20 nmdc:wfrbt-11-v5ayb614.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-vwvc8h03 INFO:root:omics_processing_id: nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d38a56c9121372e8eb41f4f8f139481c nmdc:dobj-11-s5cnp724 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d38a56c9121372e8eb41f4f8f139481c nmdc:dobj-11-my0bv930 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-vn1ar862 -INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9v821454.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-9v821454.1 +INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sag5p435.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-sag5p435.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a5ae0143648a06f48f6802db863fd4b -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-9v821454.1/nmdc_wfrqc-11-9v821454.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a5ae0143648a06f48f6802db863fd4b nmdc:dobj-11-10tngv78 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-sag5p435.1/nmdc_wfrqc-11-sag5p435.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a5ae0143648a06f48f6802db863fd4b nmdc:dobj-11-vhap4038 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9v821454.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sag5p435.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2192712dc05c20684d9dd64c7fff23d -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-9v821454.1/nmdc_wfrqc-11-9v821454.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2192712dc05c20684d9dd64c7fff23d nmdc:dobj-11-gxh84a44 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrqc-11-sag5p435.1/nmdc_wfrqc-11-sag5p435.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2192712dc05c20684d9dd64c7fff23d nmdc:dobj-11-40qpkz54 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9v821454.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfrqc-11-9v821454.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sag5p435.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfrqc-11-sag5p435.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-vn1ar862 -INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-fwge9j78.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-fwge9j78.1 +INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-tm0d3g71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:958b61e9f607403322034a4665030355 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-fwge9j78.1/nmdc_wfmgas-11-fwge9j78.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:958b61e9f607403322034a4665030355 nmdc:dobj-11-m9pf1n13 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:958b61e9f607403322034a4665030355 nmdc:dobj-11-yxs23z13 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fwge9j78.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:671a6e23049e517f506961cfd20861ef -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-fwge9j78.1/nmdc_wfmgas-11-fwge9j78.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:671a6e23049e517f506961cfd20861ef nmdc:dobj-11-7m02tn98 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:671a6e23049e517f506961cfd20861ef nmdc:dobj-11-8fjkgz21 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fwge9j78.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2cdbb7442338ecf9db8716b5035a5215 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-fwge9j78.1/nmdc_wfmgas-11-fwge9j78.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cdbb7442338ecf9db8716b5035a5215 nmdc:dobj-11-2bqhgc29 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cdbb7442338ecf9db8716b5035a5215 nmdc:dobj-11-kycyvn80 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fwge9j78.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:35cf7defb880a0b170763cb8195ef93f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-fwge9j78.1/nmdc_wfmgas-11-fwge9j78.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35cf7defb880a0b170763cb8195ef93f nmdc:dobj-11-adbj9b03 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35cf7defb880a0b170763cb8195ef93f nmdc:dobj-11-dc464178 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fwge9j78.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d899a65109456d3c071422ed902f1f2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-fwge9j78.1/nmdc_wfmgas-11-fwge9j78.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d899a65109456d3c071422ed902f1f2 nmdc:dobj-11-dx7pkf31 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfmgas-11-tm0d3g71.1/nmdc_wfmgas-11-tm0d3g71.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d899a65109456d3c071422ed902f1f2 nmdc:dobj-11-fwbksn72 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fwge9j78.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfmgas-11-fwge9j78.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tm0d3g71.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfmgas-11-tm0d3g71.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-vn1ar862 -INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-6xkwgj41.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1 +INFO:root:New activity id created for nmdc:omprc-11-vn1ar862 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kaez2s58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 nmdc:dobj-11-8yxb5s96 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e00bc6ba06e0e1c9c20804043dbcb0 nmdc:dobj-11-wksvq124 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2328978e8c33fda06a5a5895b80c8241 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2328978e8c33fda06a5a5895b80c8241 nmdc:dobj-11-1pfxs307 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2328978e8c33fda06a5a5895b80c8241 nmdc:dobj-11-ssab8s41 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7dfa51d15f43c61bee02de8638c6c077 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dfa51d15f43c61bee02de8638c6c077 nmdc:dobj-11-0e5bep28 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dfa51d15f43c61bee02de8638c6c077 nmdc:dobj-11-t0rfh883 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1e866752a2f454f73d8aebae359c4e7 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1e866752a2f454f73d8aebae359c4e7 nmdc:dobj-11-2tfc6h15 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1e866752a2f454f73d8aebae359c4e7 nmdc:dobj-11-9ctkt131 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03459c5c2cf0e48a33083f182bba3a17 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03459c5c2cf0e48a33083f182bba3a17 nmdc:dobj-11-ay8zpe52 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03459c5c2cf0e48a33083f182bba3a17 nmdc:dobj-11-7xt20795 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f1a598e4b9143836d1dc3b3db23cdf94 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1a598e4b9143836d1dc3b3db23cdf94 nmdc:dobj-11-eme0n405 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1a598e4b9143836d1dc3b3db23cdf94 nmdc:dobj-11-0dgzxp34 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 nmdc:dobj-11-wv9m1c95 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46efa14760aba640ae9ff8d4ccb3e9d1 nmdc:dobj-11-9q1yc861 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c698b534da4300aa2dfc3c1165dbaab -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c698b534da4300aa2dfc3c1165dbaab nmdc:dobj-11-tk72sf43 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c698b534da4300aa2dfc3c1165dbaab nmdc:dobj-11-4ktypz36 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fc11e1963abfe9f0ab36d766c9eb1ea -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-6xkwgj41.1/nmdc_wfrbt-11-6xkwgj41.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc11e1963abfe9f0ab36d766c9eb1ea nmdc:dobj-11-r792xz20 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vn1ar862/nmdc:wfrbt-11-kaez2s58.1/nmdc_wfrbt-11-kaez2s58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc11e1963abfe9f0ab36d766c9eb1ea nmdc:dobj-11-6rz08t45 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-vn1ar862 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6xkwgj41.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfrbt-11-6xkwgj41.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kaez2s58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8d878702ffb8a270522c33967c4e2c74 nmdc:wfrbt-11-kaez2s58.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-vn1ar862 INFO:root:omics_processing_id: nmdc:omprc-11-f1fe9370 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62915d08fc404130f4abe2c947a4e13e nmdc:dobj-11-nd0w5z22 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62915d08fc404130f4abe2c947a4e13e nmdc:dobj-11-e4tarh61 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-f1fe9370 -INFO:root:New activity id created for nmdc:omprc-11-f1fe9370 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-wqscrq86.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrqc-11-wqscrq86.1 +INFO:root:New activity id created for nmdc:omprc-11-f1fe9370 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5h9p0q70.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrqc-11-5h9p0q70.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a766b612140efdfd4de74ecde249ed69 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrqc-11-wqscrq86.1/nmdc_wfrqc-11-wqscrq86.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a766b612140efdfd4de74ecde249ed69 nmdc:dobj-11-0q28f936 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrqc-11-5h9p0q70.1/nmdc_wfrqc-11-5h9p0q70.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a766b612140efdfd4de74ecde249ed69 nmdc:dobj-11-j6pq1859 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-f1fe9370 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wqscrq86.1_filtered.fastq.gz 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-j6pee584.1/nmdc_wfrbt-11-j6pee584.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae90990c3bc65654123208de0e858227 nmdc:dobj-11-w8ht1321 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-5bckeh82.1/nmdc_wfrbt-11-5bckeh82.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae90990c3bc65654123208de0e858227 nmdc:dobj-11-ktanmh52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-f1fe9370 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j6pee584.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5bckeh82.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d0f17a3062772249181b9a0b82b62bc3 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-j6pee584.1/nmdc_wfrbt-11-j6pee584.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93505187db42e12c4de160c3baed5d0c nmdc:dobj-11-j5pjgb20 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1fe9370/nmdc:wfrbt-11-5bckeh82.1/nmdc_wfrbt-11-5bckeh82.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93505187db42e12c4de160c3baed5d0c nmdc:dobj-11-ad1mpq86 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-f1fe9370 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j6pee584.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5bckeh82.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e166b8ead19eb664d59f46d1a6c22059 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+INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-dq5nvq80.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-0dssm385.1/nmdc_wfrqc-11-0dssm385.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 nmdc:dobj-11-6zgw4m19 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-dq5nvq80.1/nmdc_wfrqc-11-dq5nvq80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b7eeb7c94ac2d82ed7e5326716b69c5 nmdc:dobj-11-s8amh137 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0dssm385.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dq5nvq80.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b66b8bd45f2be22655bf6687aace8976 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-0dssm385.1/nmdc_wfrqc-11-0dssm385.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b66b8bd45f2be22655bf6687aace8976 nmdc:dobj-11-h5gat835 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrqc-11-dq5nvq80.1/nmdc_wfrqc-11-dq5nvq80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b66b8bd45f2be22655bf6687aace8976 nmdc:dobj-11-hfmfj538 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0dssm385.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfrqc-11-0dssm385.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dq5nvq80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfrqc-11-dq5nvq80.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-fvhfvp91 -INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bk06e125.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-bk06e125.1 +INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-d3gp2z47.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:447d8460a5baeef3df16d74ace1aed5a -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-bk06e125.1/nmdc_wfmgas-11-bk06e125.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:447d8460a5baeef3df16d74ace1aed5a nmdc:dobj-11-9pre3z52 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:447d8460a5baeef3df16d74ace1aed5a nmdc:dobj-11-rtb4bz26 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bk06e125.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47d3dae6f07a5e91fdb438933591353d -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-bk06e125.1/nmdc_wfmgas-11-bk06e125.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d3dae6f07a5e91fdb438933591353d nmdc:dobj-11-5m7tvg84 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47d3dae6f07a5e91fdb438933591353d nmdc:dobj-11-nyz50160 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bk06e125.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e762343ae2d052da184e7437fcd8e697 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-bk06e125.1/nmdc_wfmgas-11-bk06e125.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e762343ae2d052da184e7437fcd8e697 nmdc:dobj-11-z88gj132 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e762343ae2d052da184e7437fcd8e697 nmdc:dobj-11-yg5kda75 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bk06e125.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b067aacc722dec7f7d5bf6bcb0627dd8 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-bk06e125.1/nmdc_wfmgas-11-bk06e125.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b067aacc722dec7f7d5bf6bcb0627dd8 nmdc:dobj-11-ag3eq212 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b067aacc722dec7f7d5bf6bcb0627dd8 nmdc:dobj-11-hggb9t89 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bk06e125.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13569543ba23307e5be94771b7e840bc -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-bk06e125.1/nmdc_wfmgas-11-bk06e125.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13569543ba23307e5be94771b7e840bc nmdc:dobj-11-g3tz0f66 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfmgas-11-d3gp2z47.1/nmdc_wfmgas-11-d3gp2z47.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13569543ba23307e5be94771b7e840bc nmdc:dobj-11-jh5ger42 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bk06e125.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfmgas-11-bk06e125.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-d3gp2z47.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfmgas-11-d3gp2z47.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-fvhfvp91 -INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-s6v13t03.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1 +INFO:root:New activity id created for nmdc:omprc-11-fvhfvp91 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-z381n812.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31070d6b6936b8d60f2e50ce54e810e9 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31070d6b6936b8d60f2e50ce54e810e9 nmdc:dobj-11-044b3j58 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31070d6b6936b8d60f2e50ce54e810e9 nmdc:dobj-11-px7f6m27 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da65b05b21fcf8d956b23d4d890513b7 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da65b05b21fcf8d956b23d4d890513b7 nmdc:dobj-11-jp87cm30 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da65b05b21fcf8d956b23d4d890513b7 nmdc:dobj-11-2cc1vh65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2dd3e449e4fd7f507ef6f45771e58fea -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2dd3e449e4fd7f507ef6f45771e58fea nmdc:dobj-11-chv15v17 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2dd3e449e4fd7f507ef6f45771e58fea nmdc:dobj-11-wwvpsr34 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:761eaf4bdfc92c48be812f522d6a2d7c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:761eaf4bdfc92c48be812f522d6a2d7c nmdc:dobj-11-ttwayt18 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:761eaf4bdfc92c48be812f522d6a2d7c nmdc:dobj-11-mbrd5088 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ca4588825f056c60678304f4ece7354 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ca4588825f056c60678304f4ece7354 nmdc:dobj-11-8pbzg673 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ca4588825f056c60678304f4ece7354 nmdc:dobj-11-08qec104 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51c6216d13cc32e0241d8a9ea665aaae -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51c6216d13cc32e0241d8a9ea665aaae nmdc:dobj-11-81gz3532 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51c6216d13cc32e0241d8a9ea665aaae nmdc:dobj-11-zcvg3s26 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c68c5efe3a3c690263e9f7b46d20c680 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c68c5efe3a3c690263e9f7b46d20c680 nmdc:dobj-11-2tc3tn58 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c68c5efe3a3c690263e9f7b46d20c680 nmdc:dobj-11-rpgbqq46 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44b662598ea9b8e73f3cc113a1700ac8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44b662598ea9b8e73f3cc113a1700ac8 nmdc:dobj-11-23rsk231 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44b662598ea9b8e73f3cc113a1700ac8 nmdc:dobj-11-5yxcrz14 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cedec6a5585e1f6e000aeed9fd24dbfa -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-s6v13t03.1/nmdc_wfrbt-11-s6v13t03.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cedec6a5585e1f6e000aeed9fd24dbfa nmdc:dobj-11-q6cqcy76 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fvhfvp91/nmdc:wfrbt-11-z381n812.1/nmdc_wfrbt-11-z381n812.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cedec6a5585e1f6e000aeed9fd24dbfa nmdc:dobj-11-j6ycva62 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-fvhfvp91 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s6v13t03.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfrbt-11-s6v13t03.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z381n812.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:155917eb8aa4c46fc6143d152059f185 nmdc:wfrbt-11-z381n812.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-fvhfvp91 INFO:root:omics_processing_id: nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:091325e3152cae4d694e2bbf5b7093db nmdc:dobj-11-mt3mw289 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:091325e3152cae4d694e2bbf5b7093db nmdc:dobj-11-rrnpzr55 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m990x183 -INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8n318d28.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-8n318d28.1 +INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zxkqwk40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-zxkqwk40.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bc47b35ff45ea1f95f32a9143bc60a7 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-8n318d28.1/nmdc_wfrqc-11-8n318d28.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bc47b35ff45ea1f95f32a9143bc60a7 nmdc:dobj-11-mnfq3c92 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-zxkqwk40.1/nmdc_wfrqc-11-zxkqwk40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bc47b35ff45ea1f95f32a9143bc60a7 nmdc:dobj-11-d5q8eq74 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8n318d28.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zxkqwk40.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8dfc11d03dc15312fff75d2d98091c72 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-8n318d28.1/nmdc_wfrqc-11-8n318d28.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dfc11d03dc15312fff75d2d98091c72 nmdc:dobj-11-sy04tk96 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrqc-11-zxkqwk40.1/nmdc_wfrqc-11-zxkqwk40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dfc11d03dc15312fff75d2d98091c72 nmdc:dobj-11-wdqh0m12 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8n318d28.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfrqc-11-8n318d28.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zxkqwk40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfrqc-11-zxkqwk40.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m990x183 -INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jg072y54.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-jg072y54.1 +INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qzwadf23.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73fb1fad2ba63e15932b314b73286aa4 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-jg072y54.1/nmdc_wfmgas-11-jg072y54.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73fb1fad2ba63e15932b314b73286aa4 nmdc:dobj-11-z5vdpb20 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73fb1fad2ba63e15932b314b73286aa4 nmdc:dobj-11-ye9dfg22 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jg072y54.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e126ec5123915148fea43200b0129d1 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-jg072y54.1/nmdc_wfmgas-11-jg072y54.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e126ec5123915148fea43200b0129d1 nmdc:dobj-11-a9wrh838 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e126ec5123915148fea43200b0129d1 nmdc:dobj-11-b2hdn804 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jg072y54.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66587bdf30209e48bdc5c0555c8d3c91 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-jg072y54.1/nmdc_wfmgas-11-jg072y54.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66587bdf30209e48bdc5c0555c8d3c91 nmdc:dobj-11-d5swnq53 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66587bdf30209e48bdc5c0555c8d3c91 nmdc:dobj-11-ym0r7y21 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jg072y54.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe15d11d1cb57b25196f91742fc42007 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-jg072y54.1/nmdc_wfmgas-11-jg072y54.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe15d11d1cb57b25196f91742fc42007 nmdc:dobj-11-v4m3gw35 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe15d11d1cb57b25196f91742fc42007 nmdc:dobj-11-11qxy831 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jg072y54.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2822f8e3c727b92fe32c02907ea483c3 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-jg072y54.1/nmdc_wfmgas-11-jg072y54.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2822f8e3c727b92fe32c02907ea483c3 nmdc:dobj-11-r9tet988 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfmgas-11-qzwadf23.1/nmdc_wfmgas-11-qzwadf23.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2822f8e3c727b92fe32c02907ea483c3 nmdc:dobj-11-aj60yq22 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jg072y54.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfmgas-11-jg072y54.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qzwadf23.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfmgas-11-qzwadf23.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m990x183 -INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-wkpxje76.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1 +INFO:root:New activity id created for nmdc:omprc-11-m990x183 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kes57604.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c08a38ec232296a9e1375d320b82f70 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c08a38ec232296a9e1375d320b82f70 nmdc:dobj-11-djn7kw78 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c08a38ec232296a9e1375d320b82f70 nmdc:dobj-11-qpyatn94 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bc9789f2ba5b43578924cdee86c8069 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bc9789f2ba5b43578924cdee86c8069 nmdc:dobj-11-52zkr264 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bc9789f2ba5b43578924cdee86c8069 nmdc:dobj-11-5kwj5t55 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60cd89cae748fbf618f821d0967f8882 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60cd89cae748fbf618f821d0967f8882 nmdc:dobj-11-9emaf151 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60cd89cae748fbf618f821d0967f8882 nmdc:dobj-11-abxf8r02 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:27a73190e6197cffeecf2de17075aaf5 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27a73190e6197cffeecf2de17075aaf5 nmdc:dobj-11-gcfgaj92 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27a73190e6197cffeecf2de17075aaf5 nmdc:dobj-11-js0xcn51 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d19a860a2ccadd00fbba8c5f6e9feffc -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d19a860a2ccadd00fbba8c5f6e9feffc nmdc:dobj-11-2d8g4n82 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d19a860a2ccadd00fbba8c5f6e9feffc nmdc:dobj-11-ep823j37 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe497a4e41456277815a2f528d02134d -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe497a4e41456277815a2f528d02134d nmdc:dobj-11-g1cebn56 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe497a4e41456277815a2f528d02134d nmdc:dobj-11-ppgms587 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39aba2cd0681e634e5a856a1643ad65d -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39aba2cd0681e634e5a856a1643ad65d nmdc:dobj-11-15cer940 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39aba2cd0681e634e5a856a1643ad65d nmdc:dobj-11-s46e0d36 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 nmdc:dobj-11-w58pgn04 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0385cc2e9ae11e5fa7bd8ccce5a160f8 nmdc:dobj-11-prncv373 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b6eae3f25e58068ee532e869d9a054e7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-wkpxje76.1/nmdc_wfrbt-11-wkpxje76.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6eae3f25e58068ee532e869d9a054e7 nmdc:dobj-11-ndhh2x09 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m990x183/nmdc:wfrbt-11-kes57604.1/nmdc_wfrbt-11-kes57604.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6eae3f25e58068ee532e869d9a054e7 nmdc:dobj-11-0vqz0v19 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m990x183 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wkpxje76.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfrbt-11-wkpxje76.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kes57604.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ca32713f459d8c4c22ecd9fc192476c5 nmdc:wfrbt-11-kes57604.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m990x183 INFO:root:omics_processing_id: nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00a2071567e1e8e58bef5263fbdf7905 nmdc:dobj-11-wyrcrg24 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00a2071567e1e8e58bef5263fbdf7905 nmdc:dobj-11-5b9jwv66 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-dh7zcy95 -INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-pb8bx942.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-pb8bx942.1 +INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hdd0rr38.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-hdd0rr38.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e0f21bfc209282f65927d4184775f35 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-pb8bx942.1/nmdc_wfrqc-11-pb8bx942.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0f21bfc209282f65927d4184775f35 nmdc:dobj-11-bmhwby84 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-hdd0rr38.1/nmdc_wfrqc-11-hdd0rr38.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0f21bfc209282f65927d4184775f35 nmdc:dobj-11-msy96421 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pb8bx942.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hdd0rr38.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45cc170af2c7cfacee3f72776f129239 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-pb8bx942.1/nmdc_wfrqc-11-pb8bx942.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45cc170af2c7cfacee3f72776f129239 nmdc:dobj-11-yfdg9r92 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrqc-11-hdd0rr38.1/nmdc_wfrqc-11-hdd0rr38.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45cc170af2c7cfacee3f72776f129239 nmdc:dobj-11-ap6sp423 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pb8bx942.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfrqc-11-pb8bx942.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hdd0rr38.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfrqc-11-hdd0rr38.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-dh7zcy95 -INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wd30zj74.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-wd30zj74.1 +INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-fxqctf12.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:896e7cf242e38d56af717f0cc31b4350 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-wd30zj74.1/nmdc_wfmgas-11-wd30zj74.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:896e7cf242e38d56af717f0cc31b4350 nmdc:dobj-11-xek2jv77 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:896e7cf242e38d56af717f0cc31b4350 nmdc:dobj-11-5p3b7z63 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wd30zj74.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13c5321b515278681bf7813472ac1fd9 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-wd30zj74.1/nmdc_wfmgas-11-wd30zj74.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13c5321b515278681bf7813472ac1fd9 nmdc:dobj-11-nft0gc77 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13c5321b515278681bf7813472ac1fd9 nmdc:dobj-11-t95gd305 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wd30zj74.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96cb29c54fd6ec82513ce930cb9773d2 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-wd30zj74.1/nmdc_wfmgas-11-wd30zj74.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96cb29c54fd6ec82513ce930cb9773d2 nmdc:dobj-11-d1v00355 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96cb29c54fd6ec82513ce930cb9773d2 nmdc:dobj-11-7kvmnq05 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wd30zj74.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4daba0991ac1ce4862bb25228a74d8ca -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-wd30zj74.1/nmdc_wfmgas-11-wd30zj74.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4daba0991ac1ce4862bb25228a74d8ca nmdc:dobj-11-j7a6ty69 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4daba0991ac1ce4862bb25228a74d8ca nmdc:dobj-11-9pw3hg72 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wd30zj74.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f6065de3d4d80ef2c2d6e6bd26591fd -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-wd30zj74.1/nmdc_wfmgas-11-wd30zj74.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f6065de3d4d80ef2c2d6e6bd26591fd nmdc:dobj-11-jm36v518 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfmgas-11-fxqctf12.1/nmdc_wfmgas-11-fxqctf12.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f6065de3d4d80ef2c2d6e6bd26591fd nmdc:dobj-11-k46t7v58 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wd30zj74.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfmgas-11-wd30zj74.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fxqctf12.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfmgas-11-fxqctf12.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-dh7zcy95 -INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jcda1c07.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1 +INFO:root:New activity id created for nmdc:omprc-11-dh7zcy95 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qsyqv423.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:380f82c8f45c6944c6bf7db3cfe57cc8 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:380f82c8f45c6944c6bf7db3cfe57cc8 nmdc:dobj-11-75vh0n49 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:380f82c8f45c6944c6bf7db3cfe57cc8 nmdc:dobj-11-rznjgh98 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c5acddf8bf9749557d7883f0dd8b269d -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5acddf8bf9749557d7883f0dd8b269d nmdc:dobj-11-sqh0dn23 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5acddf8bf9749557d7883f0dd8b269d nmdc:dobj-11-pyq3wk29 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5a236324d2ce1127f901c9759af3f84 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5a236324d2ce1127f901c9759af3f84 nmdc:dobj-11-48y0ns89 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5a236324d2ce1127f901c9759af3f84 nmdc:dobj-11-nykpae24 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85a5ffb12f7438775590755a36bc23ef -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85a5ffb12f7438775590755a36bc23ef nmdc:dobj-11-rea9nq91 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85a5ffb12f7438775590755a36bc23ef nmdc:dobj-11-t5fmf465 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd073d847659d5157e3cb65ed98c0cd5 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd073d847659d5157e3cb65ed98c0cd5 nmdc:dobj-11-az8ps082 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd073d847659d5157e3cb65ed98c0cd5 nmdc:dobj-11-mew4px86 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:97f568b222020dacabc6c313c893225e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97f568b222020dacabc6c313c893225e nmdc:dobj-11-5gv0k541 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97f568b222020dacabc6c313c893225e nmdc:dobj-11-vzvck593 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8907cd3d12fc07d5ae19eccf6dc117fa -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8907cd3d12fc07d5ae19eccf6dc117fa nmdc:dobj-11-d5nz2p14 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8907cd3d12fc07d5ae19eccf6dc117fa nmdc:dobj-11-pc76r414 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0d4aec24449645364b0bdb57d7de722f -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d4aec24449645364b0bdb57d7de722f nmdc:dobj-11-rjfcgj07 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d4aec24449645364b0bdb57d7de722f nmdc:dobj-11-ff5k7706 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61cef9a17ea4c982cfe3b3e4ac7415d6 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-jcda1c07.1/nmdc_wfrbt-11-jcda1c07.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61cef9a17ea4c982cfe3b3e4ac7415d6 nmdc:dobj-11-1tz45a55 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dh7zcy95/nmdc:wfrbt-11-qsyqv423.1/nmdc_wfrbt-11-qsyqv423.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61cef9a17ea4c982cfe3b3e4ac7415d6 nmdc:dobj-11-6ajc0f04 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-dh7zcy95 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jcda1c07.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfrbt-11-jcda1c07.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsyqv423.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:027d1088414a1e587cc9519f471ac7e5 nmdc:wfrbt-11-qsyqv423.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-dh7zcy95 INFO:root:omics_processing_id: nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe61b5e7c3aff7b27e5be1f97f55efda nmdc:dobj-11-fe84cx33 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe61b5e7c3aff7b27e5be1f97f55efda nmdc:dobj-11-3p67xr31 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-v7vx4v18 -INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8nxdr416.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-8nxdr416.1 +INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-h8ewnd41.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-h8ewnd41.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:576fc5e7df52ca50320b49075f2b4ef4 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-8nxdr416.1/nmdc_wfrqc-11-8nxdr416.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:576fc5e7df52ca50320b49075f2b4ef4 nmdc:dobj-11-hkwc4j55 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrqc-11-h8ewnd41.1/nmdc_wfrqc-11-h8ewnd41.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:576fc5e7df52ca50320b49075f2b4ef4 nmdc:dobj-11-m6xh1x97 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8nxdr416.1_filtered.fastq.gz 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nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfrqc-11-8nxdr416.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-h8ewnd41.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfrqc-11-h8ewnd41.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-v7vx4v18 -INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-j2egwn45.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-j2egwn45.1 +INFO:root:New activity id created for nmdc:omprc-11-v7vx4v18 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-h3kmym36.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50c99b3e08df9fc9d07649afdc61364b -INFO:root:New file path computed for 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-j2egwn45.1/nmdc_wfmgas-11-j2egwn45.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68e888dba633139fb85132685e5db148 nmdc:dobj-11-365ev559 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68e888dba633139fb85132685e5db148 nmdc:dobj-11-44t9wf76 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2egwn45.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f124bfc6fad15138f2ac7f37ad716773 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-j2egwn45.1/nmdc_wfmgas-11-j2egwn45.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f124bfc6fad15138f2ac7f37ad716773 nmdc:dobj-11-rte8cf74 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f124bfc6fad15138f2ac7f37ad716773 nmdc:dobj-11-2gfpat07 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2egwn45.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8558a765a73d18aaa92d6cda63b1009f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-j2egwn45.1/nmdc_wfmgas-11-j2egwn45.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8558a765a73d18aaa92d6cda63b1009f nmdc:dobj-11-txe3qy32 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8558a765a73d18aaa92d6cda63b1009f nmdc:dobj-11-tqprzj27 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2egwn45.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1f516729d4b43717221b9a070779b0c -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-j2egwn45.1/nmdc_wfmgas-11-j2egwn45.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1f516729d4b43717221b9a070779b0c nmdc:dobj-11-s2ty5544 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfmgas-11-h3kmym36.1/nmdc_wfmgas-11-h3kmym36.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1f516729d4b43717221b9a070779b0c nmdc:dobj-11-xv3ref06 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2egwn45.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfmgas-11-j2egwn45.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h3kmym36.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-83jrdc63.1/nmdc_wfrbt-11-83jrdc63.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16be67531d9be2bf5dff60892a736e6d nmdc:dobj-11-mf79d918 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16be67531d9be2bf5dff60892a736e6d nmdc:dobj-11-jxx4w727 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-83jrdc63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10d83e69db2f76a5b21c010d627401f2 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-83jrdc63.1/nmdc_wfrbt-11-83jrdc63.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10d83e69db2f76a5b21c010d627401f2 nmdc:dobj-11-e6k7fa48 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10d83e69db2f76a5b21c010d627401f2 nmdc:dobj-11-hjvv1647 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-83jrdc63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4967d9a0b3c1c769273f32bb536cef1a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-83jrdc63.1/nmdc_wfrbt-11-83jrdc63.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4967d9a0b3c1c769273f32bb536cef1a nmdc:dobj-11-0a8wmw18 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4967d9a0b3c1c769273f32bb536cef1a nmdc:dobj-11-n5b8nt54 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-83jrdc63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6914d1f0b178d2b8b96a63066b368db2 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-83jrdc63.1/nmdc_wfrbt-11-83jrdc63.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6914d1f0b178d2b8b96a63066b368db2 nmdc:dobj-11-h1jvq004 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6914d1f0b178d2b8b96a63066b368db2 nmdc:dobj-11-kqmdv351 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-83jrdc63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b8e79d2cf1780851ac71bd0ec51778f -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-83jrdc63.1/nmdc_wfrbt-11-83jrdc63.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b8e79d2cf1780851ac71bd0ec51778f nmdc:dobj-11-ydbkr688 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b8e79d2cf1780851ac71bd0ec51778f nmdc:dobj-11-hx4r6d47 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-83jrdc63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6fd2822d1a3642667ad4df25ce2b6554 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-83jrdc63.1/nmdc_wfrbt-11-83jrdc63.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fd2822d1a3642667ad4df25ce2b6554 nmdc:dobj-11-8pdkdq34 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fd2822d1a3642667ad4df25ce2b6554 nmdc:dobj-11-ny1q6286 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-83jrdc63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-83jrdc63.1/nmdc_wfrbt-11-83jrdc63.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 nmdc:dobj-11-rf6nzk69 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9ce7b2541a1e8806f973a2bd60b40a7 nmdc:dobj-11-7kc5mt63 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-83jrdc63.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1efcea7031226523445910e22be4c2a8 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path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-83jrdc63.1/nmdc_wfrbt-11-83jrdc63.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e43961184c283ad2c396054f79648b7 nmdc:dobj-11-56fc1r76 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v7vx4v18/nmdc:wfrbt-11-q6hxf922.1/nmdc_wfrbt-11-q6hxf922.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e43961184c283ad2c396054f79648b7 nmdc:dobj-11-hj9ynw95 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-v7vx4v18 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-83jrdc63.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfrbt-11-83jrdc63.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6hxf922.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0e83f4ae80eedea894d24e26caf253b2 nmdc:wfrbt-11-q6hxf922.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-v7vx4v18 INFO:root:omics_processing_id: nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3896cc46b145ba465c67a164e7446400 nmdc:dobj-11-bsvcex28 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3896cc46b145ba465c67a164e7446400 nmdc:dobj-11-mseeh213 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m6q4nw59 -INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ha1pf793.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-ha1pf793.1 +INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5fy6qz48.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5fy6qz48.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7dc1bff51751b071366b1d582cc6c00 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-ha1pf793.1/nmdc_wfrqc-11-ha1pf793.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7dc1bff51751b071366b1d582cc6c00 nmdc:dobj-11-r2mdcz69 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrqc-11-5fy6qz48.1/nmdc_wfrqc-11-5fy6qz48.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7dc1bff51751b071366b1d582cc6c00 nmdc:dobj-11-vbcywc13 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ha1pf793.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfrqc-11-ha1pf793.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5fy6qz48.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfrqc-11-5fy6qz48.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m6q4nw59 -INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jhd4xd41.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-jhd4xd41.1 +INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-1bb8xt28.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8c906280a84b91d4ac4fcc9afdc82540 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-jhd4xd41.1/nmdc_wfmgas-11-jhd4xd41.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c906280a84b91d4ac4fcc9afdc82540 nmdc:dobj-11-9k5egx69 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8c906280a84b91d4ac4fcc9afdc82540 nmdc:dobj-11-e2jxc312 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhd4xd41.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-jhd4xd41.1/nmdc_wfmgas-11-jhd4xd41.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 nmdc:dobj-11-6epmfz80 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7b2ec41abf3d5b5af025cd8e91d7208 nmdc:dobj-11-e09wpr59 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhd4xd41.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94be8bdc393ccff73573e126cf3c1718 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-jhd4xd41.1/nmdc_wfmgas-11-jhd4xd41.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94be8bdc393ccff73573e126cf3c1718 nmdc:dobj-11-sf2x8h98 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94be8bdc393ccff73573e126cf3c1718 nmdc:dobj-11-4p7e2b36 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhd4xd41.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-jhd4xd41.1/nmdc_wfmgas-11-jhd4xd41.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 nmdc:dobj-11-abf7ww65 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c5ead18c0ed7bc0e72b92d9cbd440f1 nmdc:dobj-11-k1vp0n62 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhd4xd41.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:949f2181d65b8922aa60e6d59ac02711 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-jhd4xd41.1/nmdc_wfmgas-11-jhd4xd41.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:949f2181d65b8922aa60e6d59ac02711 nmdc:dobj-11-ex07qn38 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfmgas-11-1bb8xt28.1/nmdc_wfmgas-11-1bb8xt28.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:949f2181d65b8922aa60e6d59ac02711 nmdc:dobj-11-y3fvxm24 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhd4xd41.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfmgas-11-jhd4xd41.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1bb8xt28.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfmgas-11-1bb8xt28.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m6q4nw59 -INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-cv97nk67.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1 +INFO:root:New activity id created for nmdc:omprc-11-m6q4nw59 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-0z5s9619.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12f872dde3c3b6dee75bf41e88515852 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12f872dde3c3b6dee75bf41e88515852 nmdc:dobj-11-x26ge504 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12f872dde3c3b6dee75bf41e88515852 nmdc:dobj-11-ah0fbx62 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:389a79d0558c6dcff23934998dd96b07 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:389a79d0558c6dcff23934998dd96b07 nmdc:dobj-11-j44sf195 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:389a79d0558c6dcff23934998dd96b07 nmdc:dobj-11-399q3c76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ca4a2523df1827f60864aa9441e09fba -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca4a2523df1827f60864aa9441e09fba nmdc:dobj-11-jrb5yq04 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca4a2523df1827f60864aa9441e09fba nmdc:dobj-11-5genm415 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:895bff8e573da1a654e7b2b48a9aa6d0 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:895bff8e573da1a654e7b2b48a9aa6d0 nmdc:dobj-11-9jv67q58 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:895bff8e573da1a654e7b2b48a9aa6d0 nmdc:dobj-11-sxw50t59 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b1e862ed0340a16d8a3baed056f2934 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b1e862ed0340a16d8a3baed056f2934 nmdc:dobj-11-sey4jf68 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b1e862ed0340a16d8a3baed056f2934 nmdc:dobj-11-89hwy179 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a8696952be8a44279ee1fbd0b0e2834 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a8696952be8a44279ee1fbd0b0e2834 nmdc:dobj-11-tqpwtq38 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a8696952be8a44279ee1fbd0b0e2834 nmdc:dobj-11-crgkm745 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84f9f57372a2980b08cb12fd17800b28 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84f9f57372a2980b08cb12fd17800b28 nmdc:dobj-11-s7jd1p87 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84f9f57372a2980b08cb12fd17800b28 nmdc:dobj-11-mcd6e619 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4aa13bef1460c6e06f6bcb09b184894c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4aa13bef1460c6e06f6bcb09b184894c nmdc:dobj-11-0ze2dy89 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4aa13bef1460c6e06f6bcb09b184894c nmdc:dobj-11-9vktxz05 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:806b36d02366596de52d702a8bc60f5b -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-cv97nk67.1/nmdc_wfrbt-11-cv97nk67.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:806b36d02366596de52d702a8bc60f5b nmdc:dobj-11-x27fad95 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m6q4nw59/nmdc:wfrbt-11-0z5s9619.1/nmdc_wfrbt-11-0z5s9619.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:806b36d02366596de52d702a8bc60f5b nmdc:dobj-11-834sy362 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m6q4nw59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cv97nk67.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b93367031cf986a1f436f250eb0e6cf4 nmdc:wfrbt-11-cv97nk67.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0z5s9619.1_kraken2_krona.html 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-t4e7h112.1/nmdc_wfmgas-11-t4e7h112.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8a32182da7e995f36abdf2c97b02ef3 nmdc:dobj-11-zv4wff07 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfmgas-11-69bny395.1/nmdc_wfmgas-11-69bny395.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8a32182da7e995f36abdf2c97b02ef3 nmdc:dobj-11-gypqhw56 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-t4e7h112.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-69bny395.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe4273654869d5be23aaa9db11f716ba -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ac031898fdd3ead4dfcdbcdbdf241e5 nmdc:dobj-11-q0rqn737 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ac031898fdd3ead4dfcdbcdbdf241e5 nmdc:dobj-11-x6v0p092 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73f86f2c973b377285bff389e68a79e8 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73f86f2c973b377285bff389e68a79e8 nmdc:dobj-11-9set7k76 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73f86f2c973b377285bff389e68a79e8 nmdc:dobj-11-b96tjk52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 nmdc:dobj-11-h9c15p75 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c01caf7b1223688eb7fedb5f2a1a0b10 nmdc:dobj-11-sj2wk850 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee79753220c12a7c03213ca71f75b799 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee79753220c12a7c03213ca71f75b799 nmdc:dobj-11-xry1dy57 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee79753220c12a7c03213ca71f75b799 nmdc:dobj-11-tbr5gn10 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:509cbd216ab75caea93f045f313d5f99 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:509cbd216ab75caea93f045f313d5f99 nmdc:dobj-11-cnxrnw26 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:509cbd216ab75caea93f045f313d5f99 nmdc:dobj-11-zm9bxe70 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ede0ed26db514191367b0b58d983813d -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ede0ed26db514191367b0b58d983813d nmdc:dobj-11-fc5pby91 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ede0ed26db514191367b0b58d983813d nmdc:dobj-11-3r66cd76 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66802c0e650c028f42b2ea50a3d91112 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66802c0e650c028f42b2ea50a3d91112 nmdc:dobj-11-7zdbj557 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66802c0e650c028f42b2ea50a3d91112 nmdc:dobj-11-5a04be45 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f698ef97a5f22ea749033d9ab4457b89 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f698ef97a5f22ea749033d9ab4457b89 nmdc:dobj-11-2qdmh570 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f698ef97a5f22ea749033d9ab4457b89 nmdc:dobj-11-608xew66 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71120d925f8faf51dd9b0042006209f8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-61wn6754.1/nmdc_wfrbt-11-61wn6754.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71120d925f8faf51dd9b0042006209f8 nmdc:dobj-11-kayw7s55 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jn4z8y81/nmdc:wfrbt-11-5qw7za93.1/nmdc_wfrbt-11-5qw7za93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71120d925f8faf51dd9b0042006209f8 nmdc:dobj-11-pv7h5380 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-jn4z8y81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-61wn6754.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4bc80f2b19100437061d229234925f77 nmdc:wfrbt-11-61wn6754.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5qw7za93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4bc80f2b19100437061d229234925f77 nmdc:wfrbt-11-5qw7za93.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-jn4z8y81 INFO:root:omics_processing_id: nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d2ea6cc3c176479f6355a6716bf0279 nmdc:dobj-11-zpt5cx19 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d2ea6cc3c176479f6355a6716bf0279 nmdc:dobj-11-6pc41b94 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-3d7ev832 -INFO:root:New activity id created for nmdc:omprc-11-3d7ev832 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4g7n0c72.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrqc-11-4g7n0c72.1 +INFO:root:New activity id created for nmdc:omprc-11-3d7ev832 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-85t34t27.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-85t34t27.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f89cbebe67bdb294f56643e9ac620a4a -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrqc-11-4g7n0c72.1/nmdc_wfrqc-11-4g7n0c72.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f89cbebe67bdb294f56643e9ac620a4a nmdc:dobj-11-fpk3ws91 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrqc-11-85t34t27.1/nmdc_wfrqc-11-85t34t27.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f89cbebe67bdb294f56643e9ac620a4a nmdc:dobj-11-s159y624 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4g7n0c72.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ed20a72457dcd6a3e1dce626d6ee0151 nmdc:wfrqc-11-4g7n0c72.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-85t34t27.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ed20a72457dcd6a3e1dce626d6ee0151 nmdc:wfrqc-11-85t34t27.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-3d7ev832 -INFO:root:New activity id created for nmdc:omprc-11-3d7ev832 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vqdc1z64.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-vqdc1z64.1 +INFO:root:New activity id created for nmdc:omprc-11-3d7ev832 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-s44kbk81.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-s44kbk81.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40b2d245e0383ec17b05c63262ff9ee2 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-vqdc1z64.1/nmdc_wfmgas-11-vqdc1z64.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40b2d245e0383ec17b05c63262ff9ee2 nmdc:dobj-11-tngaet26 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-s44kbk81.1/nmdc_wfmgas-11-s44kbk81.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40b2d245e0383ec17b05c63262ff9ee2 nmdc:dobj-11-epwbse81 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqdc1z64.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s44kbk81.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:17a6139866e85d3b12b248ee384deadb -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-vqdc1z64.1/nmdc_wfmgas-11-vqdc1z64.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6585b5e80d7700342c4aa37eec8d8805 nmdc:dobj-11-9zy8wg92 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-s44kbk81.1/nmdc_wfmgas-11-s44kbk81.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6585b5e80d7700342c4aa37eec8d8805 nmdc:dobj-11-kmmsfm38 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqdc1z64.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s44kbk81.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13a8624df8f7d9b939c9fb270a26e312 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-vqdc1z64.1/nmdc_wfmgas-11-vqdc1z64.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13a8624df8f7d9b939c9fb270a26e312 nmdc:dobj-11-0a17de70 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-s44kbk81.1/nmdc_wfmgas-11-s44kbk81.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13a8624df8f7d9b939c9fb270a26e312 nmdc:dobj-11-pe7yva52 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqdc1z64.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s44kbk81.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:06d6f1fab40b95f10f83f3884077b009 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-vqdc1z64.1/nmdc_wfmgas-11-vqdc1z64.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06d6f1fab40b95f10f83f3884077b009 nmdc:dobj-11-rdvm8s02 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfmgas-11-s44kbk81.1/nmdc_wfmgas-11-s44kbk81.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06d6f1fab40b95f10f83f3884077b009 nmdc:dobj-11-tgtv1g53 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqdc1z64.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ed20a72457dcd6a3e1dce626d6ee0151 nmdc:wfmgas-11-vqdc1z64.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s44kbk81.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c5213a5e2c2d9f365334d8cf632b5b7 nmdc:dobj-11-5b6agz12 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c5213a5e2c2d9f365334d8cf632b5b7 nmdc:dobj-11-22a00f84 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8656547aa697221a5232f049f7592306 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8656547aa697221a5232f049f7592306 nmdc:dobj-11-wp9tzx65 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8656547aa697221a5232f049f7592306 nmdc:dobj-11-29jpxc65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fa9d96b295c71a8046986782df92fd5 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fa9d96b295c71a8046986782df92fd5 nmdc:dobj-11-39rz8w32 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fa9d96b295c71a8046986782df92fd5 nmdc:dobj-11-dkt70h53 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee0e42f3c3013512a38d3ac8f6ac815c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee0e42f3c3013512a38d3ac8f6ac815c nmdc:dobj-11-m1r4ht11 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee0e42f3c3013512a38d3ac8f6ac815c nmdc:dobj-11-g2177w68 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cab593cada3a0d02f31d9f5ca3cf29cb -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cab593cada3a0d02f31d9f5ca3cf29cb nmdc:dobj-11-fv78mv81 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cab593cada3a0d02f31d9f5ca3cf29cb nmdc:dobj-11-80xnd942 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd64b4244fd5526177002b86f841e31e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd64b4244fd5526177002b86f841e31e nmdc:dobj-11-7yhbd495 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd64b4244fd5526177002b86f841e31e nmdc:dobj-11-dbqq7e78 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8abd613779718c12c609379d66886d97 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8abd613779718c12c609379d66886d97 nmdc:dobj-11-yv012v36 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8abd613779718c12c609379d66886d97 nmdc:dobj-11-9ts2g532 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1441315d236b82b36e8a4c67e2969141 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1441315d236b82b36e8a4c67e2969141 nmdc:dobj-11-61ej2d53 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1441315d236b82b36e8a4c67e2969141 nmdc:dobj-11-a77znp96 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:463e5e53fa4c0f645a814e39ba85c329 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-a4afma29.1/nmdc_wfrbt-11-a4afma29.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:463e5e53fa4c0f645a814e39ba85c329 nmdc:dobj-11-y4sa9915 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3d7ev832/nmdc:wfrbt-11-jvf9vc33.1/nmdc_wfrbt-11-jvf9vc33.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:463e5e53fa4c0f645a814e39ba85c329 nmdc:dobj-11-63t3bw52 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3d7ev832 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-a4afma29.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ed20a72457dcd6a3e1dce626d6ee0151 nmdc:wfrbt-11-a4afma29.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvf9vc33.1_kraken2_krona.html 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-aysxk848.1/nmdc_wfrbt-11-aysxk848.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae0cf9645216f4b684949ef778a2f82d nmdc:dobj-11-pgc8bb48 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae0cf9645216f4b684949ef778a2f82d nmdc:dobj-11-vnq6ch16 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aysxk848.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3ee040f811c7a64e1fbe391de379be3 -INFO:root:New file path computed for GOTTCHA2 Report Full: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-aysxk848.1/nmdc_wfrbt-11-aysxk848.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44f324c080104c4b837dfff2c618dd71 nmdc:dobj-11-grycph88 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44f324c080104c4b837dfff2c618dd71 nmdc:dobj-11-kfmemj78 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aysxk848.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b067154c72ddb59c09db18ecc24a01f4 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-aysxk848.1/nmdc_wfrbt-11-aysxk848.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b067154c72ddb59c09db18ecc24a01f4 nmdc:dobj-11-y5q8p156 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b067154c72ddb59c09db18ecc24a01f4 nmdc:dobj-11-v88hc037 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aysxk848.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82a5192e01f389d0ec580bd9c6cd93dc -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-aysxk848.1/nmdc_wfrbt-11-aysxk848.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82a5192e01f389d0ec580bd9c6cd93dc nmdc:dobj-11-ah1en957 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82a5192e01f389d0ec580bd9c6cd93dc nmdc:dobj-11-gd7zq965 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aysxk848.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-aysxk848.1/nmdc_wfrbt-11-aysxk848.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 nmdc:dobj-11-akd5vc87 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e9e991e8b9d0b15f28b235c8cf019c4 nmdc:dobj-11-dnk73566 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aysxk848.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b34fe8f176d00ad621e343cee280407 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-aysxk848.1/nmdc_wfrbt-11-aysxk848.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b34fe8f176d00ad621e343cee280407 nmdc:dobj-11-dba7z579 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b34fe8f176d00ad621e343cee280407 nmdc:dobj-11-h39qy816 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aysxk848.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b791766971652f65ffb1ac027441da43 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-aysxk848.1/nmdc_wfrbt-11-aysxk848.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b791766971652f65ffb1ac027441da43 nmdc:dobj-11-c50x2137 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b791766971652f65ffb1ac027441da43 nmdc:dobj-11-gsghs789 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aysxk848.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d4f5a4872fcf73915531b24326d777e6 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-aysxk848.1/nmdc_wfrbt-11-aysxk848.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4f5a4872fcf73915531b24326d777e6 nmdc:dobj-11-7jdq0v09 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-176k6334/nmdc:wfrbt-11-ntkfh697.1/nmdc_wfrbt-11-ntkfh697.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4f5a4872fcf73915531b24326d777e6 nmdc:dobj-11-8etwfj21 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-176k6334 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aysxk848.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:388875e2de566072575b3d41fb034e50 nmdc:wfrbt-11-aysxk848.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ntkfh697.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:388875e2de566072575b3d41fb034e50 nmdc:wfrbt-11-ntkfh697.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-176k6334 INFO:root:omics_processing_id: nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59532226ec5755915a032e602dc04a03 nmdc:dobj-11-tsxhvq29 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59532226ec5755915a032e602dc04a03 nmdc:dobj-11-dfev2k16 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ppm1kc56 -INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xe841p30.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-xe841p30.1 +INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9jvvh615.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-9jvvh615.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5c0d39f4849b43bebf5ebfde7ad9abf -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-xe841p30.1/nmdc_wfrqc-11-xe841p30.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5c0d39f4849b43bebf5ebfde7ad9abf nmdc:dobj-11-2e19np58 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-9jvvh615.1/nmdc_wfrqc-11-9jvvh615.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5c0d39f4849b43bebf5ebfde7ad9abf nmdc:dobj-11-v0tjgc86 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xe841p30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9jvvh615.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a73ea53daff026c7656d6c346678e6f2 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-xe841p30.1/nmdc_wfrqc-11-xe841p30.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a73ea53daff026c7656d6c346678e6f2 nmdc:dobj-11-r39dek77 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrqc-11-9jvvh615.1/nmdc_wfrqc-11-9jvvh615.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a73ea53daff026c7656d6c346678e6f2 nmdc:dobj-11-qj6scz82 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xe841p30.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfrqc-11-xe841p30.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9jvvh615.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfrqc-11-9jvvh615.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ppm1kc56 -INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yc6fyf75.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-yc6fyf75.1 +INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ncpa5r91.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3df51a0a6d09862eeb7e32afa8d093ee -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-yc6fyf75.1/nmdc_wfmgas-11-yc6fyf75.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3df51a0a6d09862eeb7e32afa8d093ee nmdc:dobj-11-f02w4905 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3df51a0a6d09862eeb7e32afa8d093ee nmdc:dobj-11-a5nvq634 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc6fyf75.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da28bc0afe95a4879ce8bee55f716bb2 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-yc6fyf75.1/nmdc_wfmgas-11-yc6fyf75.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da28bc0afe95a4879ce8bee55f716bb2 nmdc:dobj-11-c323vk96 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da28bc0afe95a4879ce8bee55f716bb2 nmdc:dobj-11-15nq4k85 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc6fyf75.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6e131d6d178a532582a0a7577c5fdf9a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-yc6fyf75.1/nmdc_wfmgas-11-yc6fyf75.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e131d6d178a532582a0a7577c5fdf9a nmdc:dobj-11-33jn1y65 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e131d6d178a532582a0a7577c5fdf9a nmdc:dobj-11-7s1r5s54 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc6fyf75.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ad61e488202766a4970fe3ec0b7579e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-yc6fyf75.1/nmdc_wfmgas-11-yc6fyf75.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ad61e488202766a4970fe3ec0b7579e nmdc:dobj-11-vhavdf65 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ad61e488202766a4970fe3ec0b7579e nmdc:dobj-11-j7mave10 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc6fyf75.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e4e9b52a43b6885985efb30ee795b23 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-yc6fyf75.1/nmdc_wfmgas-11-yc6fyf75.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e4e9b52a43b6885985efb30ee795b23 nmdc:dobj-11-xh0nve41 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfmgas-11-ncpa5r91.1/nmdc_wfmgas-11-ncpa5r91.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e4e9b52a43b6885985efb30ee795b23 nmdc:dobj-11-3246qd84 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yc6fyf75.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfmgas-11-yc6fyf75.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ncpa5r91.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfmgas-11-ncpa5r91.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ppm1kc56 -INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-xne9tb58.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1 +INFO:root:New activity id created for nmdc:omprc-11-ppm1kc56 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2fsy9d83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2116369b3394b4d51977f00653798c91 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2116369b3394b4d51977f00653798c91 nmdc:dobj-11-pswvtv64 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2116369b3394b4d51977f00653798c91 nmdc:dobj-11-bb9hrp81 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79ea8eb051f7bf1a75a50ed608b09a6c -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79ea8eb051f7bf1a75a50ed608b09a6c nmdc:dobj-11-fskgcg76 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79ea8eb051f7bf1a75a50ed608b09a6c nmdc:dobj-11-w6s0gh18 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7351615ec85d3e089ab11e6a4b476808 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7351615ec85d3e089ab11e6a4b476808 nmdc:dobj-11-erf4sb98 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7351615ec85d3e089ab11e6a4b476808 nmdc:dobj-11-wr4rgx68 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44ac21b09dea0484ded48c2644ab40d9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ac21b09dea0484ded48c2644ab40d9 nmdc:dobj-11-ydwf8v23 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ac21b09dea0484ded48c2644ab40d9 nmdc:dobj-11-n1jwzt87 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 nmdc:dobj-11-0gx2yh61 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:356c96fb42c35f12e3dd9ff6ea2d9067 nmdc:dobj-11-a0g8tw56 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd9075271692c37b143498df3e047158 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd9075271692c37b143498df3e047158 nmdc:dobj-11-nwgbpv04 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd9075271692c37b143498df3e047158 nmdc:dobj-11-cs80rt98 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bfeff910dd78b70e5d591232a8239f56 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfeff910dd78b70e5d591232a8239f56 nmdc:dobj-11-chtrjj60 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfeff910dd78b70e5d591232a8239f56 nmdc:dobj-11-bt7twd22 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec244af617bdd43044a0636840ae0ed9 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec244af617bdd43044a0636840ae0ed9 nmdc:dobj-11-0q39rz65 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec244af617bdd43044a0636840ae0ed9 nmdc:dobj-11-cq867e54 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:483399641738a013f3e65c63b8a9e643 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-xne9tb58.1/nmdc_wfrbt-11-xne9tb58.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:483399641738a013f3e65c63b8a9e643 nmdc:dobj-11-vmkaw595 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ppm1kc56/nmdc:wfrbt-11-2fsy9d83.1/nmdc_wfrbt-11-2fsy9d83.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:483399641738a013f3e65c63b8a9e643 nmdc:dobj-11-sgf69r26 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ppm1kc56 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xne9tb58.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfrbt-11-xne9tb58.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2fsy9d83.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:10f32f6b190a35a62306be4e42a4c625 nmdc:wfrbt-11-2fsy9d83.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ppm1kc56 INFO:root:omics_processing_id: nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d08893db578667fdc61428fde84f8279 nmdc:dobj-11-wbjrvj35 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d08893db578667fdc61428fde84f8279 nmdc:dobj-11-c753jp71 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gsx01g02 -INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4sz3me62.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrqc-11-4sz3me62.1 +INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-jcvdqk84.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrqc-11-jcvdqk84.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9ecfcc475d9f8f4137fe20aecd120eb6 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrqc-11-4sz3me62.1/nmdc_wfrqc-11-4sz3me62.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ecfcc475d9f8f4137fe20aecd120eb6 nmdc:dobj-11-vtzanc25 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrqc-11-jcvdqk84.1/nmdc_wfrqc-11-jcvdqk84.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ecfcc475d9f8f4137fe20aecd120eb6 nmdc:dobj-11-tegxf160 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4sz3me62.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jcvdqk84.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bc67a2b476b96593eed2aecfe758e7d -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrqc-11-4sz3me62.1/nmdc_wfrqc-11-4sz3me62.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bc67a2b476b96593eed2aecfe758e7d nmdc:dobj-11-ebvgym81 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrqc-11-jcvdqk84.1/nmdc_wfrqc-11-jcvdqk84.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bc67a2b476b96593eed2aecfe758e7d nmdc:dobj-11-maeavf29 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4sz3me62.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfrqc-11-4sz3me62.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jcvdqk84.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfrqc-11-jcvdqk84.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gsx01g02 -INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8ffekv05.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-8ffekv05.1 +INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3j4g4912.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07718de6c41dec7b2122cc6bfa6437e0 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-8ffekv05.1/nmdc_wfmgas-11-8ffekv05.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07718de6c41dec7b2122cc6bfa6437e0 nmdc:dobj-11-8xq0r890 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07718de6c41dec7b2122cc6bfa6437e0 nmdc:dobj-11-bh177531 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ffekv05.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e587d98e7e01661b57c1a67084d2a84e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-8ffekv05.1/nmdc_wfmgas-11-8ffekv05.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e587d98e7e01661b57c1a67084d2a84e nmdc:dobj-11-80r9a964 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e587d98e7e01661b57c1a67084d2a84e nmdc:dobj-11-25f49j40 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ffekv05.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec95c16ace60dd3c175ab95255e77d05 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-8ffekv05.1/nmdc_wfmgas-11-8ffekv05.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec95c16ace60dd3c175ab95255e77d05 nmdc:dobj-11-cyf5dn65 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec95c16ace60dd3c175ab95255e77d05 nmdc:dobj-11-yxyz7241 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ffekv05.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:860417fb127246c5b1ffa38c0a3f3401 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-8ffekv05.1/nmdc_wfmgas-11-8ffekv05.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:860417fb127246c5b1ffa38c0a3f3401 nmdc:dobj-11-tmy32739 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:860417fb127246c5b1ffa38c0a3f3401 nmdc:dobj-11-mcb1hm03 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ffekv05.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e6cdd777519107821142fa7be2735c2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-8ffekv05.1/nmdc_wfmgas-11-8ffekv05.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e6cdd777519107821142fa7be2735c2 nmdc:dobj-11-2phz3c39 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfmgas-11-3j4g4912.1/nmdc_wfmgas-11-3j4g4912.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e6cdd777519107821142fa7be2735c2 nmdc:dobj-11-z13tvt45 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ffekv05.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfmgas-11-8ffekv05.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3j4g4912.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfmgas-11-3j4g4912.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gsx01g02 -INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-cg113k11.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1 +INFO:root:New activity id created for nmdc:omprc-11-gsx01g02 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8nb7v613.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d6a6066ca1f7c854ce204fa52286b618 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6a6066ca1f7c854ce204fa52286b618 nmdc:dobj-11-6ka5ag66 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6a6066ca1f7c854ce204fa52286b618 nmdc:dobj-11-t33kjy25 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bf74bc0f07ececef23e455da7229f7d2 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf74bc0f07ececef23e455da7229f7d2 nmdc:dobj-11-cd0pjq07 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf74bc0f07ececef23e455da7229f7d2 nmdc:dobj-11-rccjp496 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebfe831bbab778e828dea284f6c2db17 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebfe831bbab778e828dea284f6c2db17 nmdc:dobj-11-nyx72q49 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebfe831bbab778e828dea284f6c2db17 nmdc:dobj-11-s0jgva80 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:756f3c11ef403ba8f1a240932c5fa284 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:756f3c11ef403ba8f1a240932c5fa284 nmdc:dobj-11-7ffr5g47 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:756f3c11ef403ba8f1a240932c5fa284 nmdc:dobj-11-rt7a7n28 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a214e38f694df694b742558e0131f0c7 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a214e38f694df694b742558e0131f0c7 nmdc:dobj-11-qee0ad32 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a214e38f694df694b742558e0131f0c7 nmdc:dobj-11-9yebzx82 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:989ad96a68d6a8210fd8e6feeffd4337 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:989ad96a68d6a8210fd8e6feeffd4337 nmdc:dobj-11-rbqjws69 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:989ad96a68d6a8210fd8e6feeffd4337 nmdc:dobj-11-t5v33y79 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7742daba0ff3d113ba8bb6b101acf491 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7742daba0ff3d113ba8bb6b101acf491 nmdc:dobj-11-ack9q212 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7742daba0ff3d113ba8bb6b101acf491 nmdc:dobj-11-mr1pcz75 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60270073bdb3dd9c3c5360fcf3b3c5c4 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60270073bdb3dd9c3c5360fcf3b3c5c4 nmdc:dobj-11-e1tyxx45 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60270073bdb3dd9c3c5360fcf3b3c5c4 nmdc:dobj-11-pydh8b38 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c51a18ac682f7ee4feb2af515f611ba4 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-cg113k11.1/nmdc_wfrbt-11-cg113k11.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c51a18ac682f7ee4feb2af515f611ba4 nmdc:dobj-11-z46t0k50 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gsx01g02/nmdc:wfrbt-11-8nb7v613.1/nmdc_wfrbt-11-8nb7v613.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c51a18ac682f7ee4feb2af515f611ba4 nmdc:dobj-11-enj9a783 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gsx01g02 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-cg113k11.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfrbt-11-cg113k11.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8nb7v613.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9a3092c69fde30ac1bd3457c1b27e056 nmdc:wfrbt-11-8nb7v613.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gsx01g02 INFO:root:omics_processing_id: nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4779dacd0e7071f528be8c03fac547e7 nmdc:dobj-11-vb4j9m27 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4779dacd0e7071f528be8c03fac547e7 nmdc:dobj-11-m68mq138 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-b9j4pk97 -INFO:root:New activity id created for nmdc:omprc-11-b9j4pk97 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-afkgyg50.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrqc-11-afkgyg50.1 +INFO:root:New activity id created for nmdc:omprc-11-b9j4pk97 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zjttdj21.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrqc-11-zjttdj21.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb46d869b2bff56092a3156c551d043a -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrqc-11-afkgyg50.1/nmdc_wfrqc-11-afkgyg50.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb46d869b2bff56092a3156c551d043a nmdc:dobj-11-xs4dmw02 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrqc-11-zjttdj21.1/nmdc_wfrqc-11-zjttdj21.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb46d869b2bff56092a3156c551d043a nmdc:dobj-11-089vfh07 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-afkgyg50.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zjttdj21.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44a35e5b16a815edc18ef14c1f815fdb -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrqc-11-afkgyg50.1/nmdc_wfrqc-11-afkgyg50.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44a35e5b16a815edc18ef14c1f815fdb nmdc:dobj-11-7mrnnh69 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrqc-11-zjttdj21.1/nmdc_wfrqc-11-zjttdj21.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44a35e5b16a815edc18ef14c1f815fdb nmdc:dobj-11-9br3r594 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-afkgyg50.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:74b82dcdd4d848f43175639fdc0e06a0 nmdc:wfrqc-11-afkgyg50.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zjttdj21.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:74b82dcdd4d848f43175639fdc0e06a0 nmdc:wfrqc-11-zjttdj21.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-b9j4pk97 -INFO:root:New activity id created for nmdc:omprc-11-b9j4pk97 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-b0t9bh70.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-b0t9bh70.1 +INFO:root:New activity id created for nmdc:omprc-11-b9j4pk97 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-505htd56.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b73e09e3e8bdc0890dca90c0a92a140 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-b0t9bh70.1/nmdc_wfmgas-11-b0t9bh70.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b73e09e3e8bdc0890dca90c0a92a140 nmdc:dobj-11-qvgj0996 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b73e09e3e8bdc0890dca90c0a92a140 nmdc:dobj-11-eaj43n72 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0t9bh70.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46a01c1d28aac5bd419e33c63ad4a42e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-b0t9bh70.1/nmdc_wfmgas-11-b0t9bh70.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46a01c1d28aac5bd419e33c63ad4a42e nmdc:dobj-11-t5wva319 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46a01c1d28aac5bd419e33c63ad4a42e nmdc:dobj-11-p1ecmn48 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0t9bh70.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:056937db3bb74e6e62cf4adf5a8a52fa -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-b0t9bh70.1/nmdc_wfmgas-11-b0t9bh70.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:056937db3bb74e6e62cf4adf5a8a52fa nmdc:dobj-11-z4pyts80 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:056937db3bb74e6e62cf4adf5a8a52fa nmdc:dobj-11-na0fbm87 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0t9bh70.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8430e331eb8914436cc0473c95d1c3f5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-b0t9bh70.1/nmdc_wfmgas-11-b0t9bh70.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8430e331eb8914436cc0473c95d1c3f5 nmdc:dobj-11-g445sr63 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8430e331eb8914436cc0473c95d1c3f5 nmdc:dobj-11-dbbmqa41 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0t9bh70.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91fc24b40783287114877002c00d382a -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-b0t9bh70.1/nmdc_wfmgas-11-b0t9bh70.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91fc24b40783287114877002c00d382a nmdc:dobj-11-dsd8s612 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfmgas-11-505htd56.1/nmdc_wfmgas-11-505htd56.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91fc24b40783287114877002c00d382a nmdc:dobj-11-sev1r928 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0t9bh70.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:74b82dcdd4d848f43175639fdc0e06a0 nmdc:wfmgas-11-b0t9bh70.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-505htd56.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:74b82dcdd4d848f43175639fdc0e06a0 nmdc:wfmgas-11-505htd56.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-b9j4pk97 -INFO:root:New activity id created for nmdc:omprc-11-b9j4pk97 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-e5we1g65.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1 +INFO:root:New activity id created for nmdc:omprc-11-b9j4pk97 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-7jmvfe84.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23836128606562e0a2337fbca8b8f21d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23836128606562e0a2337fbca8b8f21d nmdc:dobj-11-sn42yq14 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23836128606562e0a2337fbca8b8f21d nmdc:dobj-11-pyym5791 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d5fadb6a2a348506d17c489c516dd1f -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d5fadb6a2a348506d17c489c516dd1f nmdc:dobj-11-vv65hn18 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d5fadb6a2a348506d17c489c516dd1f nmdc:dobj-11-5vkcdg47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2cb788f136a41bb370ed607e380b1277 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cb788f136a41bb370ed607e380b1277 nmdc:dobj-11-che72q98 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cb788f136a41bb370ed607e380b1277 nmdc:dobj-11-17gx7n65 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8a828420c66f32138f3151e12c93cf4 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8a828420c66f32138f3151e12c93cf4 nmdc:dobj-11-x0706a44 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8a828420c66f32138f3151e12c93cf4 nmdc:dobj-11-kkt89472 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91c860160ee3a88b2230d5de3909feb3 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91c860160ee3a88b2230d5de3909feb3 nmdc:dobj-11-emtjcj14 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91c860160ee3a88b2230d5de3909feb3 nmdc:dobj-11-g4b1x292 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b541e0ffe85bff612b7c3271a1625109 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b541e0ffe85bff612b7c3271a1625109 nmdc:dobj-11-xskcag30 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b541e0ffe85bff612b7c3271a1625109 nmdc:dobj-11-ydxs7g41 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c462c007af3a4df4a37f416712c0f93 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c462c007af3a4df4a37f416712c0f93 nmdc:dobj-11-0hqvan02 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c462c007af3a4df4a37f416712c0f93 nmdc:dobj-11-qsfbmf50 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5b303204f5abfcef0764cb9a9fe6960 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5b303204f5abfcef0764cb9a9fe6960 nmdc:dobj-11-5cnfjp23 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5b303204f5abfcef0764cb9a9fe6960 nmdc:dobj-11-gm58bb47 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f21b0efef9933cd29d7e8c8c80713a17 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-e5we1g65.1/nmdc_wfrbt-11-e5we1g65.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f21b0efef9933cd29d7e8c8c80713a17 nmdc:dobj-11-s60qb790 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b9j4pk97/nmdc:wfrbt-11-7jmvfe84.1/nmdc_wfrbt-11-7jmvfe84.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f21b0efef9933cd29d7e8c8c80713a17 nmdc:dobj-11-yq55ng73 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-b9j4pk97 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e5we1g65.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:74b82dcdd4d848f43175639fdc0e06a0 nmdc:wfrbt-11-e5we1g65.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7jmvfe84.1_kraken2_krona.html 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path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-8srpm067.1/nmdc_wfrbt-11-8srpm067.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:773664b28b1c88402c02db092f267be7 nmdc:dobj-11-pdnebs59 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:773664b28b1c88402c02db092f267be7 nmdc:dobj-11-knnhrg33 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8srpm067.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:835ffe62701fda30cbe2d7fa548f2388 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-8srpm067.1/nmdc_wfrbt-11-8srpm067.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:835ffe62701fda30cbe2d7fa548f2388 nmdc:dobj-11-89h4rs09 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:835ffe62701fda30cbe2d7fa548f2388 nmdc:dobj-11-98jejg40 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8srpm067.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be61a2806915bce88f8d0c1f74e69e28 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-8srpm067.1/nmdc_wfrbt-11-8srpm067.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be61a2806915bce88f8d0c1f74e69e28 nmdc:dobj-11-z87sdh19 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be61a2806915bce88f8d0c1f74e69e28 nmdc:dobj-11-3rtn9h69 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8srpm067.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7b2169beb649e04645f638a1e2cb17b -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-8srpm067.1/nmdc_wfrbt-11-8srpm067.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7b2169beb649e04645f638a1e2cb17b nmdc:dobj-11-tn0c3t88 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-38h78d16/nmdc:wfrbt-11-2cxrjg64.1/nmdc_wfrbt-11-2cxrjg64.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7b2169beb649e04645f638a1e2cb17b nmdc:dobj-11-3mgm6781 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-38h78d16 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8srpm067.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d90f8be8edd7379e27608511f42cce4f nmdc:wfrbt-11-8srpm067.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2cxrjg64.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d90f8be8edd7379e27608511f42cce4f nmdc:wfrbt-11-2cxrjg64.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-38h78d16 INFO:root:omics_processing_id: nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb1897fb6c87bcf5b25c76e0ac149b67 nmdc:dobj-11-0g7ds823 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb1897fb6c87bcf5b25c76e0ac149b67 nmdc:dobj-11-qwf3dc33 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ytakgm41 -INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dxss6n98.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-dxss6n98.1 +INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cv8h0m18.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-cv8h0m18.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e93c7590bb9f9b6f559acb90d6c4f37 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-dxss6n98.1/nmdc_wfrqc-11-dxss6n98.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e93c7590bb9f9b6f559acb90d6c4f37 nmdc:dobj-11-33xjt193 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-cv8h0m18.1/nmdc_wfrqc-11-cv8h0m18.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e93c7590bb9f9b6f559acb90d6c4f37 nmdc:dobj-11-y1sj5930 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dxss6n98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cv8h0m18.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:00247c55ac3cea98fd1e3594774cd370 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-dxss6n98.1/nmdc_wfrqc-11-dxss6n98.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00247c55ac3cea98fd1e3594774cd370 nmdc:dobj-11-h6f8wm59 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrqc-11-cv8h0m18.1/nmdc_wfrqc-11-cv8h0m18.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00247c55ac3cea98fd1e3594774cd370 nmdc:dobj-11-0t7zkg98 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dxss6n98.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfrqc-11-dxss6n98.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cv8h0m18.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfrqc-11-cv8h0m18.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ytakgm41 -INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-21nce751.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-21nce751.1 +INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x8qffp53.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0d7c3cfa223d081f55f047390a81b450 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-21nce751.1/nmdc_wfmgas-11-21nce751.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d7c3cfa223d081f55f047390a81b450 nmdc:dobj-11-m0pxer45 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d7c3cfa223d081f55f047390a81b450 nmdc:dobj-11-0memhn21 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-21nce751.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b07be82e2b87dc824fc32f48f1b9376 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-21nce751.1/nmdc_wfmgas-11-21nce751.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b07be82e2b87dc824fc32f48f1b9376 nmdc:dobj-11-wt6aay71 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b07be82e2b87dc824fc32f48f1b9376 nmdc:dobj-11-atvn2j22 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-21nce751.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d94c3d4aced63619e6d7ce617f60ede0 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-21nce751.1/nmdc_wfmgas-11-21nce751.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94c3d4aced63619e6d7ce617f60ede0 nmdc:dobj-11-29k8hc47 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94c3d4aced63619e6d7ce617f60ede0 nmdc:dobj-11-tcdpvk56 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-21nce751.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77b1c42efa2b0e793eb3c90a09a53a27 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-21nce751.1/nmdc_wfmgas-11-21nce751.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77b1c42efa2b0e793eb3c90a09a53a27 nmdc:dobj-11-8bytxn38 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77b1c42efa2b0e793eb3c90a09a53a27 nmdc:dobj-11-789dw926 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-21nce751.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9db3f494f3373d5893a1fde528a08f1b -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-21nce751.1/nmdc_wfmgas-11-21nce751.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9db3f494f3373d5893a1fde528a08f1b nmdc:dobj-11-5fwbg089 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfmgas-11-x8qffp53.1/nmdc_wfmgas-11-x8qffp53.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9db3f494f3373d5893a1fde528a08f1b nmdc:dobj-11-nkfdn547 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-21nce751.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfmgas-11-21nce751.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x8qffp53.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfmgas-11-x8qffp53.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ytakgm41 -INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-831h6y24.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1 +INFO:root:New activity id created for nmdc:omprc-11-ytakgm41 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-bw9tqr56.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92d6845b03d1c9e06c77d247fd7a59c3 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92d6845b03d1c9e06c77d247fd7a59c3 nmdc:dobj-11-sdyty653 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92d6845b03d1c9e06c77d247fd7a59c3 nmdc:dobj-11-day3eg29 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:075f37069b66a9e1354572fc64b64d78 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:075f37069b66a9e1354572fc64b64d78 nmdc:dobj-11-710j7h72 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:075f37069b66a9e1354572fc64b64d78 nmdc:dobj-11-nh738b76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5e7cce38a745ddb3733e9070f291f30 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5e7cce38a745ddb3733e9070f291f30 nmdc:dobj-11-jvxtwh58 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5e7cce38a745ddb3733e9070f291f30 nmdc:dobj-11-264nv917 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:08cc61d8fede0602cf5b4e0c902e9697 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08cc61d8fede0602cf5b4e0c902e9697 nmdc:dobj-11-3t3grd16 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08cc61d8fede0602cf5b4e0c902e9697 nmdc:dobj-11-j9h8g458 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d8efa2984296797b98d31258db2c1e9 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d8efa2984296797b98d31258db2c1e9 nmdc:dobj-11-vj5jsa98 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d8efa2984296797b98d31258db2c1e9 nmdc:dobj-11-m2g6vy11 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea876b541cf655002daba6a3b6f19ae4 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea876b541cf655002daba6a3b6f19ae4 nmdc:dobj-11-tsv6fb78 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea876b541cf655002daba6a3b6f19ae4 nmdc:dobj-11-3p1z1j34 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac37e5f91352b5d004b6499f1c933e81 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac37e5f91352b5d004b6499f1c933e81 nmdc:dobj-11-9bryr391 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac37e5f91352b5d004b6499f1c933e81 nmdc:dobj-11-vjcp9n70 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e91e296312f9b97c3e43d9ec437662db -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e91e296312f9b97c3e43d9ec437662db nmdc:dobj-11-v9tdpz04 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e91e296312f9b97c3e43d9ec437662db nmdc:dobj-11-e074ep54 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0008e32dd1b90922c3335ea7e050f9e7 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-831h6y24.1/nmdc_wfrbt-11-831h6y24.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0008e32dd1b90922c3335ea7e050f9e7 nmdc:dobj-11-grhfmz20 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ytakgm41/nmdc:wfrbt-11-bw9tqr56.1/nmdc_wfrbt-11-bw9tqr56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0008e32dd1b90922c3335ea7e050f9e7 nmdc:dobj-11-6e2wb509 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ytakgm41 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-831h6y24.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfrbt-11-831h6y24.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bw9tqr56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:911f1a5b4bc13cf661631e0ad96bc802 nmdc:wfrbt-11-bw9tqr56.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ytakgm41 INFO:root:omics_processing_id: nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da44ab401932bc11c5c7e2ec4f50d945 nmdc:dobj-11-y3p3m946 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da44ab401932bc11c5c7e2ec4f50d945 nmdc:dobj-11-92f97y64 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gbv7zh09 -INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-1nhtw631.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-1nhtw631.1 +INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vyxe2087.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-vyxe2087.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be4348289be81f991af1486ad6e5dd51 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-1nhtw631.1/nmdc_wfrqc-11-1nhtw631.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4348289be81f991af1486ad6e5dd51 nmdc:dobj-11-rzpxb356 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-vyxe2087.1/nmdc_wfrqc-11-vyxe2087.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4348289be81f991af1486ad6e5dd51 nmdc:dobj-11-r17gtg25 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1nhtw631.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vyxe2087.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-1nhtw631.1/nmdc_wfrqc-11-1nhtw631.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 nmdc:dobj-11-dkvsc746 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrqc-11-vyxe2087.1/nmdc_wfrqc-11-vyxe2087.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f2c5f4e3b9e02feb33ee2dbbbc2736 nmdc:dobj-11-zvhg1c29 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1nhtw631.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfrqc-11-1nhtw631.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vyxe2087.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfrqc-11-vyxe2087.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gbv7zh09 -INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xfypz320.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-xfypz320.1 +INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0ea72515.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0208512cc7a3301b279641703c2a1504 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-xfypz320.1/nmdc_wfmgas-11-xfypz320.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0208512cc7a3301b279641703c2a1504 nmdc:dobj-11-m1a5ff94 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0208512cc7a3301b279641703c2a1504 nmdc:dobj-11-k4qnxy53 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xfypz320.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23f5a0946351e2f19e3645314176dd67 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-xfypz320.1/nmdc_wfmgas-11-xfypz320.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23f5a0946351e2f19e3645314176dd67 nmdc:dobj-11-0znsjr62 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23f5a0946351e2f19e3645314176dd67 nmdc:dobj-11-scb7qb64 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xfypz320.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89e1e1cc7625f9fa924fd4056dbf37e2 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-xfypz320.1/nmdc_wfmgas-11-xfypz320.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89e1e1cc7625f9fa924fd4056dbf37e2 nmdc:dobj-11-07twrs87 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89e1e1cc7625f9fa924fd4056dbf37e2 nmdc:dobj-11-02b6bb50 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xfypz320.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-xfypz320.1/nmdc_wfmgas-11-xfypz320.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a nmdc:dobj-11-7sz2wb65 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee7bf0f2b6ce301c0e3d0c32efa99e6a nmdc:dobj-11-239f9352 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xfypz320.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ac6a3066bd295bbee2cc8a822c3ebe8 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-xfypz320.1/nmdc_wfmgas-11-xfypz320.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ac6a3066bd295bbee2cc8a822c3ebe8 nmdc:dobj-11-avq9yx78 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfmgas-11-0ea72515.1/nmdc_wfmgas-11-0ea72515.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ac6a3066bd295bbee2cc8a822c3ebe8 nmdc:dobj-11-sre2xr11 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xfypz320.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfmgas-11-xfypz320.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0ea72515.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfmgas-11-0ea72515.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gbv7zh09 -INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-6grxjg03.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1 +INFO:root:New activity id created for nmdc:omprc-11-gbv7zh09 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1emp3s12.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d33a4811210762b1928c5c17f376c3f -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d33a4811210762b1928c5c17f376c3f nmdc:dobj-11-g0wywm15 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d33a4811210762b1928c5c17f376c3f nmdc:dobj-11-pf8mrc50 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2565349a1e98abb96b8da88ee108b55 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2565349a1e98abb96b8da88ee108b55 nmdc:dobj-11-43rgfb15 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2565349a1e98abb96b8da88ee108b55 nmdc:dobj-11-wfzp9m92 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:705c914a44264725bd5ad30e74a4919a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:705c914a44264725bd5ad30e74a4919a nmdc:dobj-11-ewd81c19 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:705c914a44264725bd5ad30e74a4919a nmdc:dobj-11-8xhs8r17 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09e02f5247faaa726b561cf782922340 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e02f5247faaa726b561cf782922340 nmdc:dobj-11-fpxrq694 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09e02f5247faaa726b561cf782922340 nmdc:dobj-11-5a24gq34 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:707e4377811aca0e7d02133092a89edd -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:707e4377811aca0e7d02133092a89edd nmdc:dobj-11-k8276697 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:707e4377811aca0e7d02133092a89edd nmdc:dobj-11-2j3djj37 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b9148a049a0e97bea5e85c37de00d674 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9148a049a0e97bea5e85c37de00d674 nmdc:dobj-11-xdx3sd37 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9148a049a0e97bea5e85c37de00d674 nmdc:dobj-11-6rtq0r24 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4266fbced36d9ee69e63c4eaacd28665 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4266fbced36d9ee69e63c4eaacd28665 nmdc:dobj-11-hzgkak97 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4266fbced36d9ee69e63c4eaacd28665 nmdc:dobj-11-wnmt5641 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:341eb58042a151931224a0839280c7dc -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:341eb58042a151931224a0839280c7dc nmdc:dobj-11-6kyvej05 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:341eb58042a151931224a0839280c7dc nmdc:dobj-11-2603wy36 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f331f13976704fc41572eed8e6cc2d0 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-6grxjg03.1/nmdc_wfrbt-11-6grxjg03.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f331f13976704fc41572eed8e6cc2d0 nmdc:dobj-11-8jccvk48 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gbv7zh09/nmdc:wfrbt-11-1emp3s12.1/nmdc_wfrbt-11-1emp3s12.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f331f13976704fc41572eed8e6cc2d0 nmdc:dobj-11-bjfed432 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gbv7zh09 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6grxjg03.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfrbt-11-6grxjg03.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1emp3s12.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0da2e2db8c28647c5410ec6396ef743b nmdc:wfrbt-11-1emp3s12.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gbv7zh09 INFO:root:omics_processing_id: nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:625075a39014d701fda177605f8f8858 nmdc:dobj-11-fp2ykv22 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:625075a39014d701fda177605f8f8858 nmdc:dobj-11-h1d65790 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-4rwmp312 -INFO:root:New activity id created for nmdc:omprc-11-4rwmp312 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ktmc5243.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrqc-11-ktmc5243.1 +INFO:root:New activity id created for nmdc:omprc-11-4rwmp312 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4w2rtx45.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrqc-11-4w2rtx45.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:57c6656a6c38d6b5fd52a1c81895949c -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrqc-11-ktmc5243.1/nmdc_wfrqc-11-ktmc5243.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:57c6656a6c38d6b5fd52a1c81895949c nmdc:dobj-11-t4j4ed93 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrqc-11-4w2rtx45.1/nmdc_wfrqc-11-4w2rtx45.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:57c6656a6c38d6b5fd52a1c81895949c nmdc:dobj-11-beg2wt14 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ktmc5243.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4w2rtx45.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:548a09fc6278448fc152176b66116078 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrqc-11-ktmc5243.1/nmdc_wfrqc-11-ktmc5243.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:548a09fc6278448fc152176b66116078 nmdc:dobj-11-ftkvg462 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrqc-11-4w2rtx45.1/nmdc_wfrqc-11-4w2rtx45.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:548a09fc6278448fc152176b66116078 nmdc:dobj-11-v5w1ab42 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ktmc5243.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:55a79b5dd58771e28686665e3c3faa0c nmdc:wfrqc-11-ktmc5243.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4w2rtx45.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:55a79b5dd58771e28686665e3c3faa0c nmdc:wfrqc-11-4w2rtx45.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-4rwmp312 -INFO:root:New activity id created for nmdc:omprc-11-4rwmp312 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hyh4f139.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfmgas-11-hyh4f139.1 +INFO:root:New activity id created for nmdc:omprc-11-4rwmp312 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qbsjge95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfmgas-11-qbsjge95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e97ddf9a9e2b4a49326c19db7cd4ab43 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfmgas-11-hyh4f139.1/nmdc_wfmgas-11-hyh4f139.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e97ddf9a9e2b4a49326c19db7cd4ab43 nmdc:dobj-11-g1yj0044 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfmgas-11-qbsjge95.1/nmdc_wfmgas-11-qbsjge95.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e97ddf9a9e2b4a49326c19db7cd4ab43 nmdc:dobj-11-s8n0k287 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hyh4f139.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qbsjge95.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10d49353a8c8641dfb78a0c07b0ce282 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfmgas-11-hyh4f139.1/nmdc_wfmgas-11-hyh4f139.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b0bc3c833d9e7ab66af8d0d84164e0a nmdc:dobj-11-ehbh9538 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfmgas-11-qbsjge95.1/nmdc_wfmgas-11-qbsjge95.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b0bc3c833d9e7ab66af8d0d84164e0a nmdc:dobj-11-fhz4f632 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hyh4f139.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qbsjge95.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0943c2c0da63e91144a1e6dd80d9a985 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfmgas-11-hyh4f139.1/nmdc_wfmgas-11-hyh4f139.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0943c2c0da63e91144a1e6dd80d9a985 nmdc:dobj-11-jatp8f60 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfmgas-11-qbsjge95.1/nmdc_wfmgas-11-qbsjge95.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0943c2c0da63e91144a1e6dd80d9a985 nmdc:dobj-11-177h8326 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hyh4f139.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qbsjge95.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0458326566d970cfeddde250d7385b03 -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-2v2m0857.1/nmdc_wfrbt-11-2v2m0857.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60e6f45dc4b2c03995647c6b4b780550 nmdc:dobj-11-cw9gnr31 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60e6f45dc4b2c03995647c6b4b780550 nmdc:dobj-11-3a84hz32 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2v2m0857.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c05d10c098c25ef44fbe6e27b4c88c86 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-2v2m0857.1/nmdc_wfrbt-11-2v2m0857.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c05d10c098c25ef44fbe6e27b4c88c86 nmdc:dobj-11-njs8mp05 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c05d10c098c25ef44fbe6e27b4c88c86 nmdc:dobj-11-n8fgb637 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2v2m0857.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bfdc7ae8e2bc129a548daf6da8884212 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-2v2m0857.1/nmdc_wfrbt-11-2v2m0857.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfdc7ae8e2bc129a548daf6da8884212 nmdc:dobj-11-q83d4480 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfdc7ae8e2bc129a548daf6da8884212 nmdc:dobj-11-2aq84z78 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2v2m0857.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:521fe79e687e03eefe255088d4e58b27 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-2v2m0857.1/nmdc_wfrbt-11-2v2m0857.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:521fe79e687e03eefe255088d4e58b27 nmdc:dobj-11-je241870 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:521fe79e687e03eefe255088d4e58b27 nmdc:dobj-11-7we95103 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2v2m0857.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42a99767c538f2d4211f14a253c91aa4 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-2v2m0857.1/nmdc_wfrbt-11-2v2m0857.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42a99767c538f2d4211f14a253c91aa4 nmdc:dobj-11-zzbb2m32 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42a99767c538f2d4211f14a253c91aa4 nmdc:dobj-11-te1vnk11 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2v2m0857.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1cd68fe37b48de6f8f542a71a550a796 -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-2v2m0857.1/nmdc_wfrbt-11-2v2m0857.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb71ec27a8d6d5881c7d31091faf9501 nmdc:dobj-11-30bbnk56 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb71ec27a8d6d5881c7d31091faf9501 nmdc:dobj-11-tagc0255 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2v2m0857.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5089c93436a2d4968b97357391f7e8b8 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-2v2m0857.1/nmdc_wfrbt-11-2v2m0857.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5089c93436a2d4968b97357391f7e8b8 nmdc:dobj-11-5gptad85 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rwmp312/nmdc:wfrbt-11-ejgk4c37.1/nmdc_wfrbt-11-ejgk4c37.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5089c93436a2d4968b97357391f7e8b8 nmdc:dobj-11-rbwc4f56 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-4rwmp312 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2v2m0857.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ejgk4c37.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:70777cd32a3f9cc0e00841da144f1cf8 -INFO:root:New file 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pjayxf32.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0724fb909f8360b900443623dbcf83d7 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrqc-11-dq7qkw35.1/nmdc_wfrqc-11-dq7qkw35.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0724fb909f8360b900443623dbcf83d7 nmdc:dobj-11-hs2yyb39 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrqc-11-pjayxf32.1/nmdc_wfrqc-11-pjayxf32.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0724fb909f8360b900443623dbcf83d7 nmdc:dobj-11-npnxh452 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dq7qkw35.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfrqc-11-dq7qkw35.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pjayxf32.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfrqc-11-pjayxf32.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-t6acv418 -INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-tz9yfx03.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-tz9yfx03.1 +INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vy9z4k78.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fec8d61f70b5c0b14993d3f29a1274e -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-tz9yfx03.1/nmdc_wfmgas-11-tz9yfx03.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fec8d61f70b5c0b14993d3f29a1274e nmdc:dobj-11-qxcpw609 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fec8d61f70b5c0b14993d3f29a1274e nmdc:dobj-11-1zh56x58 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tz9yfx03.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:309988684d9da7eb4b2773943f1f9085 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-tz9yfx03.1/nmdc_wfmgas-11-tz9yfx03.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:309988684d9da7eb4b2773943f1f9085 nmdc:dobj-11-khdfnn76 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:309988684d9da7eb4b2773943f1f9085 nmdc:dobj-11-f1et9118 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tz9yfx03.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7658c6216a5bb8954ba11e9ac1d8d498 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-tz9yfx03.1/nmdc_wfmgas-11-tz9yfx03.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7658c6216a5bb8954ba11e9ac1d8d498 nmdc:dobj-11-q0b00927 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7658c6216a5bb8954ba11e9ac1d8d498 nmdc:dobj-11-dp6maa45 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tz9yfx03.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:81010adabdfe6803e88d304331157710 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-tz9yfx03.1/nmdc_wfmgas-11-tz9yfx03.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81010adabdfe6803e88d304331157710 nmdc:dobj-11-03r6jq26 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81010adabdfe6803e88d304331157710 nmdc:dobj-11-2rdhrj21 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tz9yfx03.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48a79f97b3b00d3656d52e1cdcf63704 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-tz9yfx03.1/nmdc_wfmgas-11-tz9yfx03.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48a79f97b3b00d3656d52e1cdcf63704 nmdc:dobj-11-5ffebj06 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfmgas-11-vy9z4k78.1/nmdc_wfmgas-11-vy9z4k78.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48a79f97b3b00d3656d52e1cdcf63704 nmdc:dobj-11-qzjm4518 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tz9yfx03.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfmgas-11-tz9yfx03.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vy9z4k78.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfmgas-11-vy9z4k78.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-t6acv418 -INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-24nd8626.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1 +INFO:root:New activity id created for nmdc:omprc-11-t6acv418 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gybstb71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9d4512c07a7e449a5a554c7f59163331 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d4512c07a7e449a5a554c7f59163331 nmdc:dobj-11-mjt35817 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d4512c07a7e449a5a554c7f59163331 nmdc:dobj-11-rczjds80 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c512607f7735e7101654a1b08665eef -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c512607f7735e7101654a1b08665eef nmdc:dobj-11-t1jycw59 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c512607f7735e7101654a1b08665eef nmdc:dobj-11-0pvjkk49 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50a28b128e4f5f462b1cd0af666da6b5 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50a28b128e4f5f462b1cd0af666da6b5 nmdc:dobj-11-qww08476 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50a28b128e4f5f462b1cd0af666da6b5 nmdc:dobj-11-f0afr941 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eed53b443c40b88bdc3dd73da18d01ab -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eed53b443c40b88bdc3dd73da18d01ab nmdc:dobj-11-zrqz0f04 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eed53b443c40b88bdc3dd73da18d01ab nmdc:dobj-11-6st38h74 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 nmdc:dobj-11-pdbebz83 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4199de3d3c5d3d59beb03ecc2f9a25c0 nmdc:dobj-11-fmpfht77 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe1dc4c852803fdf077c2f8c139bb27e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe1dc4c852803fdf077c2f8c139bb27e nmdc:dobj-11-nsq46e41 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe1dc4c852803fdf077c2f8c139bb27e nmdc:dobj-11-92s2d282 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1599cb0082b1fe131190910d097a469 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1599cb0082b1fe131190910d097a469 nmdc:dobj-11-5a5gfv82 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1599cb0082b1fe131190910d097a469 nmdc:dobj-11-r3dgpa36 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 nmdc:dobj-11-sk4ta479 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a5ce4fa65826b3e02db5eeb3e92ebb2 nmdc:dobj-11-a70ryx64 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7261968652b1d553c1be543b120b27e -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-24nd8626.1/nmdc_wfrbt-11-24nd8626.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7261968652b1d553c1be543b120b27e nmdc:dobj-11-rs71ab82 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t6acv418/nmdc:wfrbt-11-gybstb71.1/nmdc_wfrbt-11-gybstb71.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7261968652b1d553c1be543b120b27e nmdc:dobj-11-4qrfye17 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t6acv418 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-24nd8626.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfrbt-11-24nd8626.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gybstb71.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4a61b553ef3a69dd77964cc973bc8dc9 nmdc:wfrbt-11-gybstb71.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-t6acv418 INFO:root:omics_processing_id: nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:722f2dbb28d08d2f65cacea4c5435da2 nmdc:dobj-11-e7a8ws29 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:722f2dbb28d08d2f65cacea4c5435da2 nmdc:dobj-11-dey3bq30 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-pwwc3q04 -INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zx51ak17.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-zx51ak17.1 +INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xxa6a783.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-xxa6a783.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1bde0a8a9a5532b4d2565f468158fb7b -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-zx51ak17.1/nmdc_wfrqc-11-zx51ak17.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bde0a8a9a5532b4d2565f468158fb7b nmdc:dobj-11-eqa9pw49 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-xxa6a783.1/nmdc_wfrqc-11-xxa6a783.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bde0a8a9a5532b4d2565f468158fb7b nmdc:dobj-11-g7mrr582 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zx51ak17.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xxa6a783.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9d0da0c395e1006577ace130471186fd -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-zx51ak17.1/nmdc_wfrqc-11-zx51ak17.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d0da0c395e1006577ace130471186fd nmdc:dobj-11-wagrzr28 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrqc-11-xxa6a783.1/nmdc_wfrqc-11-xxa6a783.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d0da0c395e1006577ace130471186fd nmdc:dobj-11-ceg6zf87 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zx51ak17.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfrqc-11-zx51ak17.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xxa6a783.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfrqc-11-xxa6a783.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-pwwc3q04 -INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-r6vgh957.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-r6vgh957.1 +INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hj93a371.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3953f6dace895eb7ce802eea576fbbde -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-r6vgh957.1/nmdc_wfmgas-11-r6vgh957.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3953f6dace895eb7ce802eea576fbbde nmdc:dobj-11-4089mm26 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3953f6dace895eb7ce802eea576fbbde nmdc:dobj-11-cdw0av19 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r6vgh957.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ef7c2514f6682e3b004f9cb541f6e72 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-r6vgh957.1/nmdc_wfmgas-11-r6vgh957.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ef7c2514f6682e3b004f9cb541f6e72 nmdc:dobj-11-shn1pv79 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ef7c2514f6682e3b004f9cb541f6e72 nmdc:dobj-11-ennw6m34 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r6vgh957.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-r6vgh957.1/nmdc_wfmgas-11-r6vgh957.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 nmdc:dobj-11-50q68m55 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1fd83726a6c35f3ccb7aaf21de26ccd7 nmdc:dobj-11-ftw0ax88 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r6vgh957.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3d8ae36d4aab87700ef3abc3268f909 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-r6vgh957.1/nmdc_wfmgas-11-r6vgh957.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3d8ae36d4aab87700ef3abc3268f909 nmdc:dobj-11-3actwc50 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3d8ae36d4aab87700ef3abc3268f909 nmdc:dobj-11-mc6xrq45 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r6vgh957.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1290fa0f1f45c1e7cddb8462b21ade6f -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-r6vgh957.1/nmdc_wfmgas-11-r6vgh957.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1290fa0f1f45c1e7cddb8462b21ade6f nmdc:dobj-11-xdd2ge02 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfmgas-11-hj93a371.1/nmdc_wfmgas-11-hj93a371.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1290fa0f1f45c1e7cddb8462b21ade6f nmdc:dobj-11-34gb7588 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-r6vgh957.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfmgas-11-r6vgh957.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hj93a371.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfmgas-11-hj93a371.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-pwwc3q04 -INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-5mg33m89.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1 +INFO:root:New activity id created for nmdc:omprc-11-pwwc3q04 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-42fbj781.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bec77a51b6d2bea22a87806d8312308 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bec77a51b6d2bea22a87806d8312308 nmdc:dobj-11-cj4g6v14 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bec77a51b6d2bea22a87806d8312308 nmdc:dobj-11-g22vvd51 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8319bbc7c65d0031cd161cb55c28569 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8319bbc7c65d0031cd161cb55c28569 nmdc:dobj-11-t1ktw667 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c8319bbc7c65d0031cd161cb55c28569 nmdc:dobj-11-f5cs9j46 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43d29eef149bc475f58a33d4d39b3870 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43d29eef149bc475f58a33d4d39b3870 nmdc:dobj-11-7p72f686 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43d29eef149bc475f58a33d4d39b3870 nmdc:dobj-11-zhepes19 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d361583c803e94e6ebd9c91bf184107c -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d361583c803e94e6ebd9c91bf184107c nmdc:dobj-11-fgk1sf65 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d361583c803e94e6ebd9c91bf184107c nmdc:dobj-11-1m6wa198 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ab53810aec7d030b99f666cb6cb8599 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ab53810aec7d030b99f666cb6cb8599 nmdc:dobj-11-cgg08a45 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ab53810aec7d030b99f666cb6cb8599 nmdc:dobj-11-vzb4wy71 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:821e594f40527f78cc9ba890eff6810a -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:821e594f40527f78cc9ba890eff6810a nmdc:dobj-11-z5b7hk02 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:821e594f40527f78cc9ba890eff6810a nmdc:dobj-11-gfd8pp62 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7912c0b2e56700f6f465b0570c08325e -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7912c0b2e56700f6f465b0570c08325e nmdc:dobj-11-br71f448 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7912c0b2e56700f6f465b0570c08325e nmdc:dobj-11-3ctaj963 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a nmdc:dobj-11-fgkm2a83 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4c77c9f0d5937c26a9b4caa631b5a3a nmdc:dobj-11-zwgkyc82 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e738ee2e3aa9d0dcb33b765880763505 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-5mg33m89.1/nmdc_wfrbt-11-5mg33m89.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e738ee2e3aa9d0dcb33b765880763505 nmdc:dobj-11-gyvn2w53 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pwwc3q04/nmdc:wfrbt-11-42fbj781.1/nmdc_wfrbt-11-42fbj781.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e738ee2e3aa9d0dcb33b765880763505 nmdc:dobj-11-h787b547 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-pwwc3q04 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5mg33m89.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfrbt-11-5mg33m89.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42fbj781.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d5bfaa5de752e0fb580863a72c5660d5 nmdc:wfrbt-11-42fbj781.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-pwwc3q04 INFO:root:omics_processing_id: nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d9b361423c5819782294a8789859b9b nmdc:dobj-11-d59kcb92 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d9b361423c5819782294a8789859b9b nmdc:dobj-11-jv257f47 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-g9t2xf29 -INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-am24aq72.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-am24aq72.1 +INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rpmwzq38.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-rpmwzq38.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:408ae81c9ee616178cb0c87195316403 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-am24aq72.1/nmdc_wfrqc-11-am24aq72.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:408ae81c9ee616178cb0c87195316403 nmdc:dobj-11-vdd2bc88 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-rpmwzq38.1/nmdc_wfrqc-11-rpmwzq38.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:408ae81c9ee616178cb0c87195316403 nmdc:dobj-11-07n05w57 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-am24aq72.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rpmwzq38.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42c9d55e0faed7b9ad85986bcd9b24c0 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-am24aq72.1/nmdc_wfrqc-11-am24aq72.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42c9d55e0faed7b9ad85986bcd9b24c0 nmdc:dobj-11-1eyd4s71 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrqc-11-rpmwzq38.1/nmdc_wfrqc-11-rpmwzq38.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42c9d55e0faed7b9ad85986bcd9b24c0 nmdc:dobj-11-vj9r5b95 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-am24aq72.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfrqc-11-am24aq72.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rpmwzq38.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfrqc-11-rpmwzq38.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-g9t2xf29 -INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5b427t42.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-5b427t42.1 +INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vnbffr26.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:732e1036130617f691e05c2e88cdb7ca -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-5b427t42.1/nmdc_wfmgas-11-5b427t42.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:732e1036130617f691e05c2e88cdb7ca nmdc:dobj-11-tsvfpq46 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:732e1036130617f691e05c2e88cdb7ca nmdc:dobj-11-9fh8t403 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5b427t42.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61321e6aa841ecf52cfcc1ebcdf9bb5a -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-5b427t42.1/nmdc_wfmgas-11-5b427t42.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61321e6aa841ecf52cfcc1ebcdf9bb5a nmdc:dobj-11-nxfa4h09 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61321e6aa841ecf52cfcc1ebcdf9bb5a nmdc:dobj-11-58s1ae73 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5b427t42.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ca2df80fed289a8b8157a0e28f8078c -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-5b427t42.1/nmdc_wfmgas-11-5b427t42.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ca2df80fed289a8b8157a0e28f8078c nmdc:dobj-11-733x0t31 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ca2df80fed289a8b8157a0e28f8078c nmdc:dobj-11-5jbkja24 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5b427t42.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2055a22c0e446c599107da987bf71f53 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-5b427t42.1/nmdc_wfmgas-11-5b427t42.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2055a22c0e446c599107da987bf71f53 nmdc:dobj-11-3jesd682 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2055a22c0e446c599107da987bf71f53 nmdc:dobj-11-h3k87465 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5b427t42.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b48f26208908b023264455703accf2e8 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-5b427t42.1/nmdc_wfmgas-11-5b427t42.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b48f26208908b023264455703accf2e8 nmdc:dobj-11-7ggz3j08 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfmgas-11-vnbffr26.1/nmdc_wfmgas-11-vnbffr26.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b48f26208908b023264455703accf2e8 nmdc:dobj-11-2tbm3976 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5b427t42.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfmgas-11-5b427t42.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vnbffr26.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfmgas-11-vnbffr26.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-g9t2xf29 -INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-eznetp02.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1 +INFO:root:New activity id created for nmdc:omprc-11-g9t2xf29 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-wvsksd75.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09bfc13dc9a390c3ee97e13baa5f7adf -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09bfc13dc9a390c3ee97e13baa5f7adf nmdc:dobj-11-6z3f1k65 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09bfc13dc9a390c3ee97e13baa5f7adf nmdc:dobj-11-68f2fj49 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d739fc9668c7cdf9ddc040214f60cf9 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d739fc9668c7cdf9ddc040214f60cf9 nmdc:dobj-11-ks79q160 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d739fc9668c7cdf9ddc040214f60cf9 nmdc:dobj-11-dta4w986 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:99b86a6cbd2e5f5b1a7ffa0222fc0c78 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99b86a6cbd2e5f5b1a7ffa0222fc0c78 nmdc:dobj-11-pa2vat81 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99b86a6cbd2e5f5b1a7ffa0222fc0c78 nmdc:dobj-11-dj8h6d19 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5975aa9e874a2aee8c733ae8c679cc0a -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5975aa9e874a2aee8c733ae8c679cc0a nmdc:dobj-11-hdwxzb76 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5975aa9e874a2aee8c733ae8c679cc0a nmdc:dobj-11-80g0mc24 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa nmdc:dobj-11-th5x5m24 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4a129c5cbdad59c4c7666cfe6cccfaa nmdc:dobj-11-rf81a931 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16548c714efadc888fc21e9dc91cd38c -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16548c714efadc888fc21e9dc91cd38c nmdc:dobj-11-xnza2f02 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16548c714efadc888fc21e9dc91cd38c nmdc:dobj-11-prqrcv90 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02d268c49f49ec83b65b6395555ee780 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02d268c49f49ec83b65b6395555ee780 nmdc:dobj-11-ve2abm96 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02d268c49f49ec83b65b6395555ee780 nmdc:dobj-11-58dcpm62 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c nmdc:dobj-11-rkgc6p21 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e30f1eae7fdb899ee2e6dcf8a6d1c67c nmdc:dobj-11-axm3em87 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe8030bc7f875c91dc1261824bde2d32 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-eznetp02.1/nmdc_wfrbt-11-eznetp02.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe8030bc7f875c91dc1261824bde2d32 nmdc:dobj-11-9rkfdd36 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9t2xf29/nmdc:wfrbt-11-wvsksd75.1/nmdc_wfrbt-11-wvsksd75.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe8030bc7f875c91dc1261824bde2d32 nmdc:dobj-11-yjf0q690 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g9t2xf29 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eznetp02.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfrbt-11-eznetp02.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wvsksd75.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cd06850d2a637c505a957ae164e0b7f2 nmdc:wfrbt-11-wvsksd75.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-g9t2xf29 INFO:root:omics_processing_id: nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a573eec92876f6621ae5305d9ed3bd2 nmdc:dobj-11-kv3y0s94 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a573eec92876f6621ae5305d9ed3bd2 nmdc:dobj-11-ay6wj371 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-b8rmfw44 -INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5ctzn680.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrqc-11-5ctzn680.1 +INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-k9an6v23.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrqc-11-k9an6v23.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:33fc49613058b0c8f86e575ea61fb2b1 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrqc-11-5ctzn680.1/nmdc_wfrqc-11-5ctzn680.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33fc49613058b0c8f86e575ea61fb2b1 nmdc:dobj-11-f7xnew96 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrqc-11-k9an6v23.1/nmdc_wfrqc-11-k9an6v23.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33fc49613058b0c8f86e575ea61fb2b1 nmdc:dobj-11-nd095y96 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5ctzn680.1_filtered.fastq.gz 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nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfrqc-11-5ctzn680.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k9an6v23.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfrqc-11-k9an6v23.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-b8rmfw44 -INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-weze4x16.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-weze4x16.1 +INFO:root:New activity id created for nmdc:omprc-11-b8rmfw44 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-a6xgy606.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfmgas-11-a6xgy606.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e71569c6e5d1b93e9b9db9135aabaf7 -INFO:root:New file path computed for 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-yk9jv637.1/nmdc_wfrbt-11-yk9jv637.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4be597d8228615626aaeacf3a49ff1f1 nmdc:dobj-11-baj7hz37 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4be597d8228615626aaeacf3a49ff1f1 nmdc:dobj-11-f00f9p29 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk9jv637.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9698d68c9284f872a7dbd35bb65ac6a -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-yk9jv637.1/nmdc_wfrbt-11-yk9jv637.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e25ad52b779d9726eb5b560ecaa7324b nmdc:dobj-11-dwes3649 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e25ad52b779d9726eb5b560ecaa7324b nmdc:dobj-11-9qa80c13 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk9jv637.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a024c99e60397c07ea093f5b54c16c22 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path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-yk9jv637.1/nmdc_wfrbt-11-yk9jv637.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:443956865b96dafaacf0840ce48af215 nmdc:dobj-11-981f5838 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b8rmfw44/nmdc:wfrbt-11-bh3d9154.1/nmdc_wfrbt-11-bh3d9154.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:443956865b96dafaacf0840ce48af215 nmdc:dobj-11-5bf93d22 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-b8rmfw44 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yk9jv637.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfrbt-11-yk9jv637.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bh3d9154.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b47381d5c2685fac0cc8526b5858a0d6 nmdc:wfrbt-11-bh3d9154.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-b8rmfw44 INFO:root:omics_processing_id: nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa30e2045705f394631c65180c5199a nmdc:dobj-11-020hf136 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa30e2045705f394631c65180c5199a nmdc:dobj-11-vtv1jk79 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-9b5r3122 -INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-z78fxd90.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-z78fxd90.1 +INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sm9krs58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-sm9krs58.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e35f6631b3eac4b2cedc89073f9003f -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-z78fxd90.1/nmdc_wfrqc-11-z78fxd90.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e35f6631b3eac4b2cedc89073f9003f nmdc:dobj-11-5atjnb73 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-sm9krs58.1/nmdc_wfrqc-11-sm9krs58.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e35f6631b3eac4b2cedc89073f9003f nmdc:dobj-11-br4rnw71 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z78fxd90.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sm9krs58.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ddbc9424f94d92db9d78d0c00b89c49 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-z78fxd90.1/nmdc_wfrqc-11-z78fxd90.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ddbc9424f94d92db9d78d0c00b89c49 nmdc:dobj-11-cytk3w09 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrqc-11-sm9krs58.1/nmdc_wfrqc-11-sm9krs58.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ddbc9424f94d92db9d78d0c00b89c49 nmdc:dobj-11-rbs5mz26 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z78fxd90.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfrqc-11-z78fxd90.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sm9krs58.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfrqc-11-sm9krs58.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-9b5r3122 -INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rrj4jq83.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-rrj4jq83.1 +INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wkhm1416.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77530c3056fbba7914f2d98baf3fedd0 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-rrj4jq83.1/nmdc_wfmgas-11-rrj4jq83.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77530c3056fbba7914f2d98baf3fedd0 nmdc:dobj-11-myhfb020 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77530c3056fbba7914f2d98baf3fedd0 nmdc:dobj-11-559y2613 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrj4jq83.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0a6e994ecf21ff02d973c3a8d015a63 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-rrj4jq83.1/nmdc_wfmgas-11-rrj4jq83.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0a6e994ecf21ff02d973c3a8d015a63 nmdc:dobj-11-rpe4cx73 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0a6e994ecf21ff02d973c3a8d015a63 nmdc:dobj-11-6bpnt464 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrj4jq83.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c3861f53217f359d22be182d2c58936 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-rrj4jq83.1/nmdc_wfmgas-11-rrj4jq83.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c3861f53217f359d22be182d2c58936 nmdc:dobj-11-8jkr4y75 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c3861f53217f359d22be182d2c58936 nmdc:dobj-11-7bxf7q83 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrj4jq83.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec920dd0af387efe10935cd876f90164 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-rrj4jq83.1/nmdc_wfmgas-11-rrj4jq83.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec920dd0af387efe10935cd876f90164 nmdc:dobj-11-8etw6f21 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec920dd0af387efe10935cd876f90164 nmdc:dobj-11-g4v1ta56 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrj4jq83.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3a366b4c1b9c56427d411f26b766dcb -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-rrj4jq83.1/nmdc_wfmgas-11-rrj4jq83.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3a366b4c1b9c56427d411f26b766dcb nmdc:dobj-11-x1z6ce53 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfmgas-11-wkhm1416.1/nmdc_wfmgas-11-wkhm1416.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3a366b4c1b9c56427d411f26b766dcb nmdc:dobj-11-n1zptb55 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rrj4jq83.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfmgas-11-rrj4jq83.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wkhm1416.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfmgas-11-wkhm1416.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-9b5r3122 -INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-697kdx11.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1 +INFO:root:New activity id created for nmdc:omprc-11-9b5r3122 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-34gqgg60.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b502bbfab4472b9f807e42da6669ff03 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b502bbfab4472b9f807e42da6669ff03 nmdc:dobj-11-fk38f473 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b502bbfab4472b9f807e42da6669ff03 nmdc:dobj-11-z51t3889 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dfe464eccd67275b1a2260b3a220a989 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfe464eccd67275b1a2260b3a220a989 nmdc:dobj-11-78d0rr68 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfe464eccd67275b1a2260b3a220a989 nmdc:dobj-11-v40rph54 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b58ec241e99903bab584889485b2e6e -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b58ec241e99903bab584889485b2e6e nmdc:dobj-11-4f3fw619 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b58ec241e99903bab584889485b2e6e nmdc:dobj-11-gn36xd63 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 nmdc:dobj-11-g1yz9954 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ee6a19947c3e4222f8d132c02c3b5c2 nmdc:dobj-11-ykzt6023 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:17e52966db1deffee78333283d09c1e6 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:17e52966db1deffee78333283d09c1e6 nmdc:dobj-11-sn9gqe73 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:17e52966db1deffee78333283d09c1e6 nmdc:dobj-11-6dc12v16 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:418fdfd8511374f352cc1874a62900ee -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:418fdfd8511374f352cc1874a62900ee nmdc:dobj-11-p4tefz89 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:418fdfd8511374f352cc1874a62900ee nmdc:dobj-11-x4vs0d91 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:392ed4abdde861ca7b0c054ef1a84d58 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:392ed4abdde861ca7b0c054ef1a84d58 nmdc:dobj-11-7fmaan53 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:392ed4abdde861ca7b0c054ef1a84d58 nmdc:dobj-11-8hxsy975 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:678f73fd90526668a53f9b85569ae668 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:678f73fd90526668a53f9b85569ae668 nmdc:dobj-11-yejbt891 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:678f73fd90526668a53f9b85569ae668 nmdc:dobj-11-ft35va39 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae7950a56988de4518d577ddd9407193 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-697kdx11.1/nmdc_wfrbt-11-697kdx11.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae7950a56988de4518d577ddd9407193 nmdc:dobj-11-a1fz3k45 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9b5r3122/nmdc:wfrbt-11-34gqgg60.1/nmdc_wfrbt-11-34gqgg60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae7950a56988de4518d577ddd9407193 nmdc:dobj-11-7jyaq906 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9b5r3122 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-697kdx11.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfrbt-11-697kdx11.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-34gqgg60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c07a3e390051a54c02dfe7dd7ffaee45 nmdc:wfrbt-11-34gqgg60.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9b5r3122 INFO:root:omics_processing_id: nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61a97e80cb6d26e90f140f38b008abab nmdc:dobj-11-vwrfce47 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61a97e80cb6d26e90f140f38b008abab nmdc:dobj-11-30r5ct51 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-6evhzd33 -INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qeskj796.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrqc-11-qeskj796.1 +INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3k57f380.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrqc-11-3k57f380.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:584ae19217e4fea72e00f14576638a52 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrqc-11-qeskj796.1/nmdc_wfrqc-11-qeskj796.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:584ae19217e4fea72e00f14576638a52 nmdc:dobj-11-np4kzh50 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrqc-11-3k57f380.1/nmdc_wfrqc-11-3k57f380.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:584ae19217e4fea72e00f14576638a52 nmdc:dobj-11-93nd6p36 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qeskj796.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3k57f380.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd44cfc945ffc20d8db0099c619f6644 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrqc-11-qeskj796.1/nmdc_wfrqc-11-qeskj796.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd44cfc945ffc20d8db0099c619f6644 nmdc:dobj-11-b8d3a537 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrqc-11-3k57f380.1/nmdc_wfrqc-11-3k57f380.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd44cfc945ffc20d8db0099c619f6644 nmdc:dobj-11-yxfdqf87 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qeskj796.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfrqc-11-qeskj796.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3k57f380.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfrqc-11-3k57f380.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-6evhzd33 -INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3bpg0357.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-3bpg0357.1 +INFO:root:New activity id created for nmdc:omprc-11-6evhzd33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-frn8pv20.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:abc6615b11cef93b8d3ec01850d0969f -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-3bpg0357.1/nmdc_wfmgas-11-3bpg0357.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abc6615b11cef93b8d3ec01850d0969f nmdc:dobj-11-vrp9sx78 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abc6615b11cef93b8d3ec01850d0969f nmdc:dobj-11-29d6hw96 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3bpg0357.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1676817d11fb0a8a2253b3ad8c349efb -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-3bpg0357.1/nmdc_wfmgas-11-3bpg0357.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1676817d11fb0a8a2253b3ad8c349efb nmdc:dobj-11-00bn3d67 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1676817d11fb0a8a2253b3ad8c349efb nmdc:dobj-11-ze6a7974 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3bpg0357.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcc861fad2312fe5cf8af409cb9b899b -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-3bpg0357.1/nmdc_wfmgas-11-3bpg0357.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcc861fad2312fe5cf8af409cb9b899b nmdc:dobj-11-j0s4c047 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcc861fad2312fe5cf8af409cb9b899b nmdc:dobj-11-0mpfvg27 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3bpg0357.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7fbe406ab0837d507ceec7f5eb023be4 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-3bpg0357.1/nmdc_wfmgas-11-3bpg0357.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fbe406ab0837d507ceec7f5eb023be4 nmdc:dobj-11-w5zr2x11 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fbe406ab0837d507ceec7f5eb023be4 nmdc:dobj-11-nf8vt791 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3bpg0357.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2716879930e592b68f9b8c743955c594 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-3bpg0357.1/nmdc_wfmgas-11-3bpg0357.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2716879930e592b68f9b8c743955c594 nmdc:dobj-11-44xm2x37 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfmgas-11-frn8pv20.1/nmdc_wfmgas-11-frn8pv20.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2716879930e592b68f9b8c743955c594 nmdc:dobj-11-ndsat231 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3bpg0357.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfmgas-11-3bpg0357.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-frn8pv20.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27d4ee97741634f477cb80fe90502cb1 nmdc:dobj-11-rcasxx47 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27d4ee97741634f477cb80fe90502cb1 nmdc:dobj-11-9xsabq78 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc nmdc:dobj-11-bghb1177 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dd45c9e3abe39f8b5b1d8e23139b7cc nmdc:dobj-11-q0s1d758 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46f4d0431ee1c17a9fa63a699190d48a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46f4d0431ee1c17a9fa63a699190d48a nmdc:dobj-11-a80cb894 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46f4d0431ee1c17a9fa63a699190d48a nmdc:dobj-11-8sppe050 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:078eaa687d5fb03268c8d075ea0fc698 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:078eaa687d5fb03268c8d075ea0fc698 nmdc:dobj-11-cr6bem77 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:078eaa687d5fb03268c8d075ea0fc698 nmdc:dobj-11-1cfqnb64 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5cfab3386ea0289c12df7adf724aedb2 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5cfab3386ea0289c12df7adf724aedb2 nmdc:dobj-11-y4qqmd31 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5cfab3386ea0289c12df7adf724aedb2 nmdc:dobj-11-451egc29 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8751a56c3673edf134302b976d160b76 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8751a56c3673edf134302b976d160b76 nmdc:dobj-11-30xwve41 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8751a56c3673edf134302b976d160b76 nmdc:dobj-11-xcn55g46 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1381039de3a60dc7ab5ad30679eec98e -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1381039de3a60dc7ab5ad30679eec98e nmdc:dobj-11-shcb9q09 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1381039de3a60dc7ab5ad30679eec98e nmdc:dobj-11-qrj41x42 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:568a5dc85e94b6f90d3811f5cf953592 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:568a5dc85e94b6f90d3811f5cf953592 nmdc:dobj-11-pc0qkt12 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:568a5dc85e94b6f90d3811f5cf953592 nmdc:dobj-11-8aemrb92 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0f5be7b98b9076e8a7472d3a591250b -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-fkyfs419.1/nmdc_wfrbt-11-fkyfs419.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f5be7b98b9076e8a7472d3a591250b nmdc:dobj-11-07wzq753 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6evhzd33/nmdc:wfrbt-11-3dttby02.1/nmdc_wfrbt-11-3dttby02.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0f5be7b98b9076e8a7472d3a591250b nmdc:dobj-11-025c7432 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-6evhzd33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fkyfs419.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfrbt-11-fkyfs419.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3dttby02.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d618ccb3b86ea1a779d6ebba290d84c5 nmdc:wfrbt-11-3dttby02.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-6evhzd33 INFO:root:omics_processing_id: nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e84b6d72daf43591617f4c278a8540f nmdc:dobj-11-8nkmwq35 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6e84b6d72daf43591617f4c278a8540f nmdc:dobj-11-e5gnge50 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-1h7pv713 -INFO:root:New activity id created for nmdc:omprc-11-1h7pv713 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hy3ga538.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrqc-11-hy3ga538.1 +INFO:root:New activity id created for nmdc:omprc-11-1h7pv713 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-pvk8jk17.1 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nmdc:3be418a84679c9b906d0ae0e3fb2fde1 nmdc:wfrqc-11-hy3ga538.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pvk8jk17.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:3be418a84679c9b906d0ae0e3fb2fde1 nmdc:wfrqc-11-pvk8jk17.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-1h7pv713 -INFO:root:New activity id created for nmdc:omprc-11-1h7pv713 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-s6qd2h03.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-s6qd2h03.1 +INFO:root:New activity id created for nmdc:omprc-11-1h7pv713 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5rhht020.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-5rhht020.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82de6e9679c7d42e0ac1f58e06630d54 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-s6qd2h03.1/nmdc_wfmgas-11-s6qd2h03.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82de6e9679c7d42e0ac1f58e06630d54 nmdc:dobj-11-33gxpv49 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-5rhht020.1/nmdc_wfmgas-11-5rhht020.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82de6e9679c7d42e0ac1f58e06630d54 nmdc:dobj-11-jgfrwv85 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s6qd2h03.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5rhht020.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a55d13b3dbf537c5709941bb501307e -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-s6qd2h03.1/nmdc_wfmgas-11-s6qd2h03.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c91f602e45ac73701126b5f1ecae321 nmdc:dobj-11-dr4tzv63 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-5rhht020.1/nmdc_wfmgas-11-5rhht020.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c91f602e45ac73701126b5f1ecae321 nmdc:dobj-11-492wh302 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s6qd2h03.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5rhht020.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32902caf35a43f22b5bf2faace9b945e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-s6qd2h03.1/nmdc_wfmgas-11-s6qd2h03.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32902caf35a43f22b5bf2faace9b945e nmdc:dobj-11-bt94vn80 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-5rhht020.1/nmdc_wfmgas-11-5rhht020.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32902caf35a43f22b5bf2faace9b945e nmdc:dobj-11-hdpv3469 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s6qd2h03.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5rhht020.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:acdc8bced0d11f98aaeb11a5cbd22436 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-s6qd2h03.1/nmdc_wfmgas-11-s6qd2h03.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:acdc8bced0d11f98aaeb11a5cbd22436 nmdc:dobj-11-ye8zrg68 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfmgas-11-5rhht020.1/nmdc_wfmgas-11-5rhht020.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:acdc8bced0d11f98aaeb11a5cbd22436 nmdc:dobj-11-spyxqx08 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s6qd2h03.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3be418a84679c9b906d0ae0e3fb2fde1 nmdc:wfmgas-11-s6qd2h03.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5rhht020.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:3be418a84679c9b906d0ae0e3fb2fde1 nmdc:wfmgas-11-5rhht020.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-1h7pv713 -INFO:root:New activity id created for nmdc:omprc-11-1h7pv713 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-93cydm10.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1 +INFO:root:New activity id created for nmdc:omprc-11-1h7pv713 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-q6d63p86.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8daa4e616f01adecebfec90bc9130985 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8daa4e616f01adecebfec90bc9130985 nmdc:dobj-11-w0c26y21 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8daa4e616f01adecebfec90bc9130985 nmdc:dobj-11-9hqhg775 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a2a5d0c8a30aeb106361a08fa17db00 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a2a5d0c8a30aeb106361a08fa17db00 nmdc:dobj-11-886s4k06 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a2a5d0c8a30aeb106361a08fa17db00 nmdc:dobj-11-jfwkaf81 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41efc00020b49913588cbde1f6c9d701 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41efc00020b49913588cbde1f6c9d701 nmdc:dobj-11-hvpw0828 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41efc00020b49913588cbde1f6c9d701 nmdc:dobj-11-209dbr78 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:156e32e85e85365894929bd421fe30f6 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:156e32e85e85365894929bd421fe30f6 nmdc:dobj-11-2djscj54 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:156e32e85e85365894929bd421fe30f6 nmdc:dobj-11-2nqvxh70 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8c409788042d02d9eaac0dabdfc82ef -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8c409788042d02d9eaac0dabdfc82ef nmdc:dobj-11-sk6v0803 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8c409788042d02d9eaac0dabdfc82ef nmdc:dobj-11-qvbtbx33 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25c22f7a2e3c7594fd619e68c21bbf7b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25c22f7a2e3c7594fd619e68c21bbf7b nmdc:dobj-11-fr2g2j33 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25c22f7a2e3c7594fd619e68c21bbf7b nmdc:dobj-11-525hdh92 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:209438a5ee7b712c9f167c42ac9dea49 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:209438a5ee7b712c9f167c42ac9dea49 nmdc:dobj-11-3cqaty40 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:209438a5ee7b712c9f167c42ac9dea49 nmdc:dobj-11-0ze76235 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 nmdc:dobj-11-xxph0z31 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:137bb7370deeefe9c00bd4c7fe2e7a50 nmdc:dobj-11-4d47ea21 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84e2bf02fb5e6ee6d02eac4406ea02db -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-93cydm10.1/nmdc_wfrbt-11-93cydm10.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84e2bf02fb5e6ee6d02eac4406ea02db nmdc:dobj-11-yqthd370 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1h7pv713/nmdc:wfrbt-11-q6d63p86.1/nmdc_wfrbt-11-q6d63p86.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84e2bf02fb5e6ee6d02eac4406ea02db nmdc:dobj-11-wrp5jm73 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-1h7pv713 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-93cydm10.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3be418a84679c9b906d0ae0e3fb2fde1 nmdc:wfrbt-11-93cydm10.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q6d63p86.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3be418a84679c9b906d0ae0e3fb2fde1 nmdc:wfrbt-11-q6d63p86.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-1h7pv713 INFO:root:omics_processing_id: nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f0c6c7be34ce22ab91df9a75f3e4379 nmdc:dobj-11-f2sdcj33 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f0c6c7be34ce22ab91df9a75f3e4379 nmdc:dobj-11-52qvpg38 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-1xy9v450 -INFO:root:New activity id created for nmdc:omprc-11-1xy9v450 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-14rz4h42.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrqc-11-14rz4h42.1 +INFO:root:New activity id created for nmdc:omprc-11-1xy9v450 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ktn6vf82.1 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-tsgt5729.1/nmdc_wfmgas-11-tsgt5729.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c69f65e09e27905cc8d3c31f063543b nmdc:dobj-11-g76r2y05 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c69f65e09e27905cc8d3c31f063543b nmdc:dobj-11-9abkpz36 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tsgt5729.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7522a920a9afa2cb73f32515b31deca1 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-tsgt5729.1/nmdc_wfmgas-11-tsgt5729.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f91be7d590df595c0a752a020fca3e7e nmdc:dobj-11-kb7kr539 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f91be7d590df595c0a752a020fca3e7e nmdc:dobj-11-h85gec40 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tsgt5729.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da69f52f5804b6ecff8da97142240f2f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-tsgt5729.1/nmdc_wfmgas-11-tsgt5729.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da69f52f5804b6ecff8da97142240f2f nmdc:dobj-11-08q8yp58 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da69f52f5804b6ecff8da97142240f2f nmdc:dobj-11-pnc9y430 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tsgt5729.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3f2d85d7569163784320b7d12f9ccc2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-tsgt5729.1/nmdc_wfmgas-11-tsgt5729.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3f2d85d7569163784320b7d12f9ccc2 nmdc:dobj-11-6an02314 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfmgas-11-jhpa9s81.1/nmdc_wfmgas-11-jhpa9s81.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3f2d85d7569163784320b7d12f9ccc2 nmdc:dobj-11-25qhaw83 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-tsgt5729.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9822da1d2cddb75b48db56ce5c03feaf nmdc:wfmgas-11-tsgt5729.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jhpa9s81.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:838feed210e675f80ea726f5c0a89927 nmdc:dobj-11-nv7q6470 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:838feed210e675f80ea726f5c0a89927 nmdc:dobj-11-ngy1n542 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36db98ccafccefe424de6a9eaca9baa8 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36db98ccafccefe424de6a9eaca9baa8 nmdc:dobj-11-sa1mmn40 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36db98ccafccefe424de6a9eaca9baa8 nmdc:dobj-11-5jhmc889 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5abd608f71f5b1ab7c57679c58b564e -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5abd608f71f5b1ab7c57679c58b564e nmdc:dobj-11-jpyd1h50 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5abd608f71f5b1ab7c57679c58b564e nmdc:dobj-11-neprye73 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3949585d6a27e0e4a58770c563674912 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3949585d6a27e0e4a58770c563674912 nmdc:dobj-11-1x465g44 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3949585d6a27e0e4a58770c563674912 nmdc:dobj-11-0qxh2c14 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7cc9f39ac328dba5930d0c2c31d869c7 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7cc9f39ac328dba5930d0c2c31d869c7 nmdc:dobj-11-4nbn8j91 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7cc9f39ac328dba5930d0c2c31d869c7 nmdc:dobj-11-c0p6me73 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f18eed5d4249afa49805e301110be150 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f18eed5d4249afa49805e301110be150 nmdc:dobj-11-pbj3ss80 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f18eed5d4249afa49805e301110be150 nmdc:dobj-11-zvpbq682 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b68a50fcbb28e49af30ad5094f1621c1 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b68a50fcbb28e49af30ad5094f1621c1 nmdc:dobj-11-e5c4cw20 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b68a50fcbb28e49af30ad5094f1621c1 nmdc:dobj-11-0mayb085 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd403a1c7ab421feeca3d5858b9bc4ab -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd403a1c7ab421feeca3d5858b9bc4ab nmdc:dobj-11-jz5mnf49 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd403a1c7ab421feeca3d5858b9bc4ab nmdc:dobj-11-v1ktwd52 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:832c6e017ce77e8dfa710ad1d65b6c03 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-btvykr24.1/nmdc_wfrbt-11-btvykr24.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:832c6e017ce77e8dfa710ad1d65b6c03 nmdc:dobj-11-6gns1g84 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1xy9v450/nmdc:wfrbt-11-1jfa2y46.1/nmdc_wfrbt-11-1jfa2y46.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:832c6e017ce77e8dfa710ad1d65b6c03 nmdc:dobj-11-qx457p31 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-1xy9v450 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-btvykr24.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9822da1d2cddb75b48db56ce5c03feaf nmdc:wfrbt-11-btvykr24.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1jfa2y46.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9822da1d2cddb75b48db56ce5c03feaf nmdc:wfrbt-11-1jfa2y46.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-1xy9v450 INFO:root:omics_processing_id: nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e84dfde0d632897ed93abf84fd75dbd nmdc:dobj-11-n5234e09 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e84dfde0d632897ed93abf84fd75dbd nmdc:dobj-11-zjd0f095 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-hmqcq810 -INFO:root:New activity id created for nmdc:omprc-11-hmqcq810 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0t95mq33.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrqc-11-0t95mq33.1 +INFO:root:New activity id created for nmdc:omprc-11-hmqcq810 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xcn49454.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrqc-11-xcn49454.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ef54b43368bb21e4bafe6512b693760 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrqc-11-0t95mq33.1/nmdc_wfrqc-11-0t95mq33.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ef54b43368bb21e4bafe6512b693760 nmdc:dobj-11-y1jzma80 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrqc-11-xcn49454.1/nmdc_wfrqc-11-xcn49454.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ef54b43368bb21e4bafe6512b693760 nmdc:dobj-11-6x7qy853 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0t95mq33.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xcn49454.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34fdc5db1d8e2cd22678cfba63187ebb -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrqc-11-0t95mq33.1/nmdc_wfrqc-11-0t95mq33.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34fdc5db1d8e2cd22678cfba63187ebb nmdc:dobj-11-6xb2tx15 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrqc-11-xcn49454.1/nmdc_wfrqc-11-xcn49454.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34fdc5db1d8e2cd22678cfba63187ebb nmdc:dobj-11-1p8ye338 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0t95mq33.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfrqc-11-0t95mq33.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xcn49454.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfrqc-11-xcn49454.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-hmqcq810 -INFO:root:New activity id created for nmdc:omprc-11-hmqcq810 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rksg4893.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-rksg4893.1 +INFO:root:New activity id created for nmdc:omprc-11-hmqcq810 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hwk8h122.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92bb0f88e88ae860971924a6006f7ee6 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-rksg4893.1/nmdc_wfmgas-11-rksg4893.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92bb0f88e88ae860971924a6006f7ee6 nmdc:dobj-11-pazax521 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1/nmdc_wfmgas-11-hwk8h122.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92bb0f88e88ae860971924a6006f7ee6 nmdc:dobj-11-13x27620 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rksg4893.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hwk8h122.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37662dfa44f2cf6eea410f8e7d5c3359 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-rksg4893.1/nmdc_wfmgas-11-rksg4893.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37662dfa44f2cf6eea410f8e7d5c3359 nmdc:dobj-11-yt0dzx73 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1/nmdc_wfmgas-11-hwk8h122.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37662dfa44f2cf6eea410f8e7d5c3359 nmdc:dobj-11-1sd6wk34 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rksg4893.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hwk8h122.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a9eede9b748f6b22bb4657ef954652ea -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-rksg4893.1/nmdc_wfmgas-11-rksg4893.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9eede9b748f6b22bb4657ef954652ea nmdc:dobj-11-d11rkx39 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1/nmdc_wfmgas-11-hwk8h122.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9eede9b748f6b22bb4657ef954652ea nmdc:dobj-11-hvq37n26 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rksg4893.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hwk8h122.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:200239924baef39c49577b0eeda7563a -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-rksg4893.1/nmdc_wfmgas-11-rksg4893.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:200239924baef39c49577b0eeda7563a nmdc:dobj-11-qnbb1y36 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1/nmdc_wfmgas-11-hwk8h122.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:200239924baef39c49577b0eeda7563a nmdc:dobj-11-ja3eb162 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rksg4893.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hwk8h122.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c435f75c7f44178a2b2a341694910fbe -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-rksg4893.1/nmdc_wfmgas-11-rksg4893.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c435f75c7f44178a2b2a341694910fbe nmdc:dobj-11-pge54n23 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfmgas-11-hwk8h122.1/nmdc_wfmgas-11-hwk8h122.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c435f75c7f44178a2b2a341694910fbe nmdc:dobj-11-8rr7j573 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rksg4893.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfmgas-11-rksg4893.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hwk8h122.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfmgas-11-hwk8h122.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-hmqcq810 -INFO:root:New activity id created for nmdc:omprc-11-hmqcq810 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-pw934d79.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1 +INFO:root:New activity id created for nmdc:omprc-11-hmqcq810 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gfy4n529.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c31bb7727915abb60531b5f1d6ebe078 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c31bb7727915abb60531b5f1d6ebe078 nmdc:dobj-11-sf6jwx43 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c31bb7727915abb60531b5f1d6ebe078 nmdc:dobj-11-74fjxg77 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:798a9e4ea0aeaf42662474256caa2933 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:798a9e4ea0aeaf42662474256caa2933 nmdc:dobj-11-m4jhfs50 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:798a9e4ea0aeaf42662474256caa2933 nmdc:dobj-11-aw0sk861 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 nmdc:dobj-11-1tearq85 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a82d6602d0bbcd2ff124542dcc7ef84 nmdc:dobj-11-c6ktsz09 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bd7f6549ae98f5ee74ee57b77018ccd -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bd7f6549ae98f5ee74ee57b77018ccd nmdc:dobj-11-8r1fc842 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bd7f6549ae98f5ee74ee57b77018ccd nmdc:dobj-11-d3vc7w44 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e47c2276096e22b1b5b38f3fa1aff710 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e47c2276096e22b1b5b38f3fa1aff710 nmdc:dobj-11-wksm7660 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e47c2276096e22b1b5b38f3fa1aff710 nmdc:dobj-11-wwn26093 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90b469897a00f34db51efab16f076189 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90b469897a00f34db51efab16f076189 nmdc:dobj-11-s6z0kz91 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90b469897a00f34db51efab16f076189 nmdc:dobj-11-xax6x133 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:812af0a1cf69a1241225e79a056099e3 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:812af0a1cf69a1241225e79a056099e3 nmdc:dobj-11-9w2v2c04 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:812af0a1cf69a1241225e79a056099e3 nmdc:dobj-11-jrb2js84 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e4bc9e2005f6c6e74c8414edea24420 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e4bc9e2005f6c6e74c8414edea24420 nmdc:dobj-11-ay88zj89 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e4bc9e2005f6c6e74c8414edea24420 nmdc:dobj-11-k2wpnm25 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e01d9eff79cc154c9f4020eaf5d2264 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-pw934d79.1/nmdc_wfrbt-11-pw934d79.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e01d9eff79cc154c9f4020eaf5d2264 nmdc:dobj-11-dr5njc86 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hmqcq810/nmdc:wfrbt-11-gfy4n529.1/nmdc_wfrbt-11-gfy4n529.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e01d9eff79cc154c9f4020eaf5d2264 nmdc:dobj-11-2brcgb23 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-hmqcq810 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pw934d79.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfrbt-11-pw934d79.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gfy4n529.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:287f0b50acf7f7fa1cd1038391a2a2cc nmdc:wfrbt-11-gfy4n529.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-hmqcq810 +INFO:root:omics_processing_id: nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f05dd5770ff3ebe3b56f008854bac78 nmdc:dobj-11-5n1cwb86 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-1a2d4549 +INFO:root:New activity id created for nmdc:omprc-11-1a2d4549 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9ww01x07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfrqc-11-9ww01x07.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aecbb2d36dffa69932bc7cee73b736dd +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfrqc-11-9ww01x07.1/nmdc_wfrqc-11-9ww01x07.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aecbb2d36dffa69932bc7cee73b736dd nmdc:dobj-11-69pvns30 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ww01x07.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cbc8fa5c109892ae9f37600c2b65094e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfrqc-11-9ww01x07.1/nmdc_wfrqc-11-9ww01x07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbc8fa5c109892ae9f37600c2b65094e nmdc:dobj-11-zbpe7t02 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ww01x07.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 nmdc:wfrqc-11-9ww01x07.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-1a2d4549 +INFO:root:New activity id created for nmdc:omprc-11-1a2d4549 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jmat7061.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be1f0af45c3e6d5f8eec727320987b95 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be1f0af45c3e6d5f8eec727320987b95 nmdc:dobj-11-m2rweb27 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:545ac8cf12280a833c30b9de5171c9de +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:545ac8cf12280a833c30b9de5171c9de nmdc:dobj-11-xr5fmx38 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f55760dd8a7d7701ffb33e6b89cd0210 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f55760dd8a7d7701ffb33e6b89cd0210 nmdc:dobj-11-f8ebmg57 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed641164309b15152dc25fbff08ec3e7 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed641164309b15152dc25fbff08ec3e7 nmdc:dobj-11-n0a2dy72 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a11794842326ebb25fc702b5862395b +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1a2d4549/nmdc:wfmgas-11-jmat7061.1/nmdc_wfmgas-11-jmat7061.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a11794842326ebb25fc702b5862395b nmdc:dobj-11-3k9t9v50 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jmat7061.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:171a5e03ee71c13bda4a4c2a7ba51cd2 nmdc:wfmgas-11-jmat7061.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-1a2d4549 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-1a2d4549 INFO:root:omics_processing_id: nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9f1ddf2e1eca8e9c8a18b5096433c54 nmdc:dobj-11-0yfrqc56 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9f1ddf2e1eca8e9c8a18b5096433c54 nmdc:dobj-11-e142rn17 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5fgefy28 -INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-y054t314.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-y054t314.1 +INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hf70s042.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-hf70s042.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a867d66faabc1e340c31bb9c882127c -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-y054t314.1/nmdc_wfrqc-11-y054t314.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a867d66faabc1e340c31bb9c882127c nmdc:dobj-11-zp2qke30 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-hf70s042.1/nmdc_wfrqc-11-hf70s042.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a867d66faabc1e340c31bb9c882127c nmdc:dobj-11-4hqz1y21 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-y054t314.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hf70s042.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fc52f9de8c540cc0edac30c0f81dc61 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-y054t314.1/nmdc_wfrqc-11-y054t314.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fc52f9de8c540cc0edac30c0f81dc61 nmdc:dobj-11-4ft2e170 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrqc-11-hf70s042.1/nmdc_wfrqc-11-hf70s042.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fc52f9de8c540cc0edac30c0f81dc61 nmdc:dobj-11-x37ext25 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-y054t314.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfrqc-11-y054t314.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hf70s042.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfrqc-11-hf70s042.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5fgefy28 -INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-fg5p8397.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-fg5p8397.1 +INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qqamk633.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-fg5p8397.1/nmdc_wfmgas-11-fg5p8397.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d7cfe6b0fd00c0b852436d0b204cd42 nmdc:dobj-11-73a75x89 +INFO:root:New file path computed for Assembly Contigs: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1c52c10f78dd6ad514095c836994704 nmdc:dobj-11-jarmme97 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fg5p8397.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d5bd20077c9f68e5434d4eb145b5235 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-fg5p8397.1/nmdc_wfmgas-11-fg5p8397.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d5bd20077c9f68e5434d4eb145b5235 nmdc:dobj-11-m9mfzz02 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d5bd20077c9f68e5434d4eb145b5235 nmdc:dobj-11-ed4k8z08 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fg5p8397.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a9b318266bbf9747202ee6b19d163c5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-fg5p8397.1/nmdc_wfmgas-11-fg5p8397.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a9b318266bbf9747202ee6b19d163c5 nmdc:dobj-11-135sa257 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a9b318266bbf9747202ee6b19d163c5 nmdc:dobj-11-gx98gq70 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fg5p8397.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:367c3d138dbf10c772b48853b08bda60 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-fg5p8397.1/nmdc_wfmgas-11-fg5p8397.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:367c3d138dbf10c772b48853b08bda60 nmdc:dobj-11-k71g7950 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfmgas-11-qqamk633.1/nmdc_wfmgas-11-qqamk633.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:367c3d138dbf10c772b48853b08bda60 nmdc:dobj-11-4mch4570 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-fg5p8397.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfmgas-11-fg5p8397.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qqamk633.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfmgas-11-qqamk633.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-5fgefy28 -INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-yjssr576.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-yjssr576.1 +INFO:root:New activity id created for nmdc:omprc-11-5fgefy28 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-66pfkv80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82fe4e5311a521d5271e11cfec7e944e -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-yjssr576.1/nmdc_wfrbt-11-yjssr576.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82fe4e5311a521d5271e11cfec7e944e nmdc:dobj-11-nxw9vf29 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82fe4e5311a521d5271e11cfec7e944e nmdc:dobj-11-dazgh162 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yjssr576.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bee4b758e80e4e4d8829bebf0618b13 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-yjssr576.1/nmdc_wfrbt-11-yjssr576.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bee4b758e80e4e4d8829bebf0618b13 nmdc:dobj-11-rz3fvj08 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bee4b758e80e4e4d8829bebf0618b13 nmdc:dobj-11-4dqcbp04 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yjssr576.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c523105f854b6ebdb0b90d69e331f3c4 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-yjssr576.1/nmdc_wfrbt-11-yjssr576.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c523105f854b6ebdb0b90d69e331f3c4 nmdc:dobj-11-tx58pt08 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c523105f854b6ebdb0b90d69e331f3c4 nmdc:dobj-11-7bt2tj24 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yjssr576.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea9e507877edf55b3534beff2f8ce84f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-yjssr576.1/nmdc_wfrbt-11-yjssr576.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea9e507877edf55b3534beff2f8ce84f nmdc:dobj-11-aewqfb02 +INFO:root:New file path computed for Centrifuge Taxonomic 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file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06407789c5f04cfe027601a08b26e2d1 nmdc:dobj-11-ge9b1975 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yjssr576.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41541759a6d5f17b651f851dc9b6192a -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-yjssr576.1/nmdc_wfrbt-11-yjssr576.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41541759a6d5f17b651f851dc9b6192a nmdc:dobj-11-wg0ns772 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41541759a6d5f17b651f851dc9b6192a nmdc:dobj-11-kyee3j49 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yjssr576.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24b21fa9194d3821932ea688976f1cdc -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-yjssr576.1/nmdc_wfrbt-11-yjssr576.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24b21fa9194d3821932ea688976f1cdc nmdc:dobj-11-pkrs0w57 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24b21fa9194d3821932ea688976f1cdc nmdc:dobj-11-sn60yv46 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yjssr576.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:06cbbccb88f0f4f2c5ed159061c5c65d -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-yjssr576.1/nmdc_wfrbt-11-yjssr576.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:06cbbccb88f0f4f2c5ed159061c5c65d nmdc:dobj-11-s648d140 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for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5fgefy28/nmdc:wfrbt-11-66pfkv80.1/nmdc_wfrbt-11-66pfkv80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd58622718f0251e0cb9f3736ca3ec90 nmdc:dobj-11-4qvt0z62 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5fgefy28 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yjssr576.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfrbt-11-yjssr576.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-66pfkv80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3c454c071a5841c0a0c029358ba713c nmdc:wfrbt-11-66pfkv80.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5fgefy28 INFO:root:omics_processing_id: nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:076ff634d28625c03f79842a9b3bb354 nmdc:dobj-11-vz3r7154 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:076ff634d28625c03f79842a9b3bb354 nmdc:dobj-11-gza5qs90 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-13gdjn24 -INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g23c0d83.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrqc-11-g23c0d83.1 +INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-epxe4s80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrqc-11-epxe4s80.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b3e1513f9dea9a1caf90021a33f588f -INFO:root:New file path computed for Filtered Sequencing Reads: 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nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfrqc-11-epxe4s80.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-13gdjn24 -INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-rhne3y73.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-rhne3y73.1 +INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5ekhdb68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7335d465520b07babf5397dfe9633945 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-rhne3y73.1/nmdc_wfmgas-11-rhne3y73.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7335d465520b07babf5397dfe9633945 nmdc:dobj-11-pe9dj607 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7335d465520b07babf5397dfe9633945 nmdc:dobj-11-9fvm5f97 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rhne3y73.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e427ceb17df98fa3c9138ecfefb163b -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-rhne3y73.1/nmdc_wfmgas-11-rhne3y73.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e427ceb17df98fa3c9138ecfefb163b nmdc:dobj-11-vn1wsq12 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e427ceb17df98fa3c9138ecfefb163b nmdc:dobj-11-d3t1sq59 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rhne3y73.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89bc146abfc7fd7200250a905c714d15 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-rhne3y73.1/nmdc_wfmgas-11-rhne3y73.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89bc146abfc7fd7200250a905c714d15 nmdc:dobj-11-rnby2353 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89bc146abfc7fd7200250a905c714d15 nmdc:dobj-11-0jdxam93 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rhne3y73.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed1b19ad42494558c2fff1fc35f2afa9 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-rhne3y73.1/nmdc_wfmgas-11-rhne3y73.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed1b19ad42494558c2fff1fc35f2afa9 nmdc:dobj-11-nce7fa03 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed1b19ad42494558c2fff1fc35f2afa9 nmdc:dobj-11-ycxxd532 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rhne3y73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85e71c34e863288c6036796051bf7123 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-rhne3y73.1/nmdc_wfmgas-11-rhne3y73.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85e71c34e863288c6036796051bf7123 nmdc:dobj-11-rqqw6k72 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfmgas-11-5ekhdb68.1/nmdc_wfmgas-11-5ekhdb68.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85e71c34e863288c6036796051bf7123 nmdc:dobj-11-30v96a92 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-rhne3y73.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfmgas-11-rhne3y73.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5ekhdb68.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfmgas-11-5ekhdb68.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-13gdjn24 -INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-h0hwk578.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1 +INFO:root:New activity id created for nmdc:omprc-11-13gdjn24 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qvg6pq80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:abfda82b829a6f486e2e4357eae04617 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abfda82b829a6f486e2e4357eae04617 nmdc:dobj-11-9k259e45 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abfda82b829a6f486e2e4357eae04617 nmdc:dobj-11-fbpjsg82 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ad4e158d9409664f353c759d104cd03 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ad4e158d9409664f353c759d104cd03 nmdc:dobj-11-cfwwqz07 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ad4e158d9409664f353c759d104cd03 nmdc:dobj-11-vkwe5q68 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9feb6472b82630a835d826cddf6d372 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9feb6472b82630a835d826cddf6d372 nmdc:dobj-11-e990hr63 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9feb6472b82630a835d826cddf6d372 nmdc:dobj-11-8g72k222 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37556f9d6d9e076d3a4ff7351de59195 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37556f9d6d9e076d3a4ff7351de59195 nmdc:dobj-11-pfpgqp65 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37556f9d6d9e076d3a4ff7351de59195 nmdc:dobj-11-2p77vn86 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9aff0c76859be07434ad33c701355628 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9aff0c76859be07434ad33c701355628 nmdc:dobj-11-8tk4eg22 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9aff0c76859be07434ad33c701355628 nmdc:dobj-11-bgsxtj89 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aab0ffee88319927d99955503be5d25c -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aab0ffee88319927d99955503be5d25c nmdc:dobj-11-qmtf8t41 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aab0ffee88319927d99955503be5d25c nmdc:dobj-11-sj190t91 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd67787fdedef21e1dae8d0273a2954e -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd67787fdedef21e1dae8d0273a2954e nmdc:dobj-11-xqa67z19 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd67787fdedef21e1dae8d0273a2954e nmdc:dobj-11-8gq71c28 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e8a37758c99f077a094b8f0bee3e3084 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8a37758c99f077a094b8f0bee3e3084 nmdc:dobj-11-nhcyg766 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8a37758c99f077a094b8f0bee3e3084 nmdc:dobj-11-4raz8m06 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aec249c35e1c7db4d0295823c2473ce4 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-h0hwk578.1/nmdc_wfrbt-11-h0hwk578.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aec249c35e1c7db4d0295823c2473ce4 nmdc:dobj-11-yzt43n28 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-13gdjn24/nmdc:wfrbt-11-qvg6pq80.1/nmdc_wfrbt-11-qvg6pq80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aec249c35e1c7db4d0295823c2473ce4 nmdc:dobj-11-4tgw7936 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-13gdjn24 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h0hwk578.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfrbt-11-h0hwk578.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvg6pq80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d6b63e3a46732091d898cf437faff699 nmdc:wfrbt-11-qvg6pq80.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-13gdjn24 INFO:root:omics_processing_id: nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b5fb58671da52ebbff9fc85324638ac nmdc:dobj-11-c8bd1455 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b5fb58671da52ebbff9fc85324638ac nmdc:dobj-11-rxchea23 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-cw2se491 -INFO:root:New activity id created for nmdc:omprc-11-cw2se491 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ftzzwd47.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-ftzzwd47.1 +INFO:root:New activity id created for nmdc:omprc-11-cw2se491 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qmnkeg32.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-qmnkeg32.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:35c0f54b804137bde8ed81731a4d893d -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-ftzzwd47.1/nmdc_wfrqc-11-ftzzwd47.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35c0f54b804137bde8ed81731a4d893d nmdc:dobj-11-s83wcw23 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-qmnkeg32.1/nmdc_wfrqc-11-qmnkeg32.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35c0f54b804137bde8ed81731a4d893d nmdc:dobj-11-xr4jgd27 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ftzzwd47.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qmnkeg32.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:265fd0b881198f0f80ce5c5bcf8eca9b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-ftzzwd47.1/nmdc_wfrqc-11-ftzzwd47.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265fd0b881198f0f80ce5c5bcf8eca9b nmdc:dobj-11-e9eaqt71 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrqc-11-qmnkeg32.1/nmdc_wfrqc-11-qmnkeg32.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:265fd0b881198f0f80ce5c5bcf8eca9b nmdc:dobj-11-af72ky65 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ftzzwd47.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9f918130ae225680650bd4f9c1a1a76f nmdc:wfrqc-11-ftzzwd47.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qmnkeg32.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9f918130ae225680650bd4f9c1a1a76f nmdc:wfrqc-11-qmnkeg32.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-cw2se491 -INFO:root:New activity id created for nmdc:omprc-11-cw2se491 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-1rx3y394.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-1rx3y394.1 +INFO:root:New activity id created for nmdc:omprc-11-cw2se491 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-pm7yq164.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-pm7yq164.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47ff7457e64164dac8314f289862f0c9 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-1rx3y394.1/nmdc_wfmgas-11-1rx3y394.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47ff7457e64164dac8314f289862f0c9 nmdc:dobj-11-76vx6872 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-pm7yq164.1/nmdc_wfmgas-11-pm7yq164.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47ff7457e64164dac8314f289862f0c9 nmdc:dobj-11-tp1hsp27 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rx3y394.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pm7yq164.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc641532c09acc9622a197f6420d2fcc -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-1rx3y394.1/nmdc_wfmgas-11-1rx3y394.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc641532c09acc9622a197f6420d2fcc nmdc:dobj-11-7hh63s96 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-pm7yq164.1/nmdc_wfmgas-11-pm7yq164.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc641532c09acc9622a197f6420d2fcc nmdc:dobj-11-t50d5n37 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rx3y394.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pm7yq164.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:736ab7919817f20385ef3a332567902c -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-1rx3y394.1/nmdc_wfmgas-11-1rx3y394.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:736ab7919817f20385ef3a332567902c nmdc:dobj-11-tdcanq67 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-pm7yq164.1/nmdc_wfmgas-11-pm7yq164.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:736ab7919817f20385ef3a332567902c nmdc:dobj-11-ygfeq689 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rx3y394.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pm7yq164.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:184bc1165d1a3ba37520f4b2846f3293 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-1rx3y394.1/nmdc_wfmgas-11-1rx3y394.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:184bc1165d1a3ba37520f4b2846f3293 nmdc:dobj-11-jcj60669 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-pm7yq164.1/nmdc_wfmgas-11-pm7yq164.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:184bc1165d1a3ba37520f4b2846f3293 nmdc:dobj-11-jv68zq68 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rx3y394.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pm7yq164.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:288461f14e244e9f8a682bbc35ad3d06 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-1rx3y394.1/nmdc_wfmgas-11-1rx3y394.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:288461f14e244e9f8a682bbc35ad3d06 nmdc:dobj-11-e12qtw77 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfmgas-11-pm7yq164.1/nmdc_wfmgas-11-pm7yq164.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:288461f14e244e9f8a682bbc35ad3d06 nmdc:dobj-11-masz9v77 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1rx3y394.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9f918130ae225680650bd4f9c1a1a76f nmdc:wfmgas-11-1rx3y394.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pm7yq164.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9f918130ae225680650bd4f9c1a1a76f nmdc:wfmgas-11-pm7yq164.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-cw2se491 -INFO:root:New activity id created for nmdc:omprc-11-cw2se491 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-tb8hy965.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1 +INFO:root:New activity id created for nmdc:omprc-11-cw2se491 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-j3s4q586.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b99f97eda4950f6289cddd8954c39f96 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b99f97eda4950f6289cddd8954c39f96 nmdc:dobj-11-kkg2yg04 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b99f97eda4950f6289cddd8954c39f96 nmdc:dobj-11-51ak4583 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c962c7cbed3aa54888789be8bb96b815 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c962c7cbed3aa54888789be8bb96b815 nmdc:dobj-11-y5xpxv78 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c962c7cbed3aa54888789be8bb96b815 nmdc:dobj-11-raveex52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6bee0593905a7f060c05197c1db8c5b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6bee0593905a7f060c05197c1db8c5b nmdc:dobj-11-ekgasq10 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6bee0593905a7f060c05197c1db8c5b nmdc:dobj-11-4rc2jm69 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:226525a4b5a49e3df4b7318918074a5b -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:226525a4b5a49e3df4b7318918074a5b nmdc:dobj-11-atfz2a09 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:226525a4b5a49e3df4b7318918074a5b nmdc:dobj-11-aqndxc26 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43d0e628b153f69958ca1b9ddf2b632e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43d0e628b153f69958ca1b9ddf2b632e nmdc:dobj-11-4jcgj879 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43d0e628b153f69958ca1b9ddf2b632e nmdc:dobj-11-wewq1614 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96ae41661f13057c768c8bce130b48f4 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96ae41661f13057c768c8bce130b48f4 nmdc:dobj-11-wfdxnv14 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96ae41661f13057c768c8bce130b48f4 nmdc:dobj-11-00a3fk13 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:655b130e00d0a38b1ad9663651ff0fee -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:655b130e00d0a38b1ad9663651ff0fee nmdc:dobj-11-vjwk7026 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:655b130e00d0a38b1ad9663651ff0fee nmdc:dobj-11-2g0eva73 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb88401ee8248955c07828fbf2f55eca -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb88401ee8248955c07828fbf2f55eca nmdc:dobj-11-9ejx9b30 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb88401ee8248955c07828fbf2f55eca nmdc:dobj-11-yhm67n24 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e3d33b96dc2b39b2b0a4f498df1c982 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-tb8hy965.1/nmdc_wfrbt-11-tb8hy965.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e3d33b96dc2b39b2b0a4f498df1c982 nmdc:dobj-11-m7gpa409 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cw2se491/nmdc:wfrbt-11-j3s4q586.1/nmdc_wfrbt-11-j3s4q586.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e3d33b96dc2b39b2b0a4f498df1c982 nmdc:dobj-11-4rxfpr37 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-cw2se491 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tb8hy965.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9f918130ae225680650bd4f9c1a1a76f nmdc:wfrbt-11-tb8hy965.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j3s4q586.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9f918130ae225680650bd4f9c1a1a76f nmdc:wfrbt-11-j3s4q586.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-cw2se491 +INFO:root:omics_processing_id: nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc02b18994a1ea74808d16d18735a04a nmdc:dobj-11-h7ms5892 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-kxct1j50 +INFO:root:New activity id created for nmdc:omprc-11-kxct1j50 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-znfhav25.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfrqc-11-znfhav25.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea20f99ba35d3ce686e5e199b34704e5 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfrqc-11-znfhav25.1/nmdc_wfrqc-11-znfhav25.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea20f99ba35d3ce686e5e199b34704e5 nmdc:dobj-11-r3gcdh40 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-znfhav25.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7675fc38a8d6c6ea22ef1b9bdcb14499 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfrqc-11-znfhav25.1/nmdc_wfrqc-11-znfhav25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7675fc38a8d6c6ea22ef1b9bdcb14499 nmdc:dobj-11-t90a2705 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-znfhav25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4a43bf91c943db8e9829ea992c576c8e nmdc:wfrqc-11-znfhav25.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-kxct1j50 +INFO:root:New activity id created for nmdc:omprc-11-kxct1j50 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5n8sf706.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9abbaf8bb8ec0d8f687d25a01e4ba8c7 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9abbaf8bb8ec0d8f687d25a01e4ba8c7 nmdc:dobj-11-jdxjf868 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:552e73866c3a9542daf7cbe9ecb4eb5e +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:552e73866c3a9542daf7cbe9ecb4eb5e nmdc:dobj-11-1pf5v802 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d22adbc2f694c0fe06081271f2d70414 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d22adbc2f694c0fe06081271f2d70414 nmdc:dobj-11-3wa42t10 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e39a861965a826732018e11da3523f9 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e39a861965a826732018e11da3523f9 nmdc:dobj-11-ed3bje50 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0af96b416a01858dbe3ebeebfab48515 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kxct1j50/nmdc:wfmgas-11-5n8sf706.1/nmdc_wfmgas-11-5n8sf706.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0af96b416a01858dbe3ebeebfab48515 nmdc:dobj-11-hgrr4w53 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5n8sf706.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4a43bf91c943db8e9829ea992c576c8e nmdc:wfmgas-11-5n8sf706.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-kxct1j50 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-kxct1j50 INFO:root:omics_processing_id: nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f4ddf238d2d7dec9c86b93713d0ff075 nmdc:dobj-11-e1xpn224 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f4ddf238d2d7dec9c86b93713d0ff075 nmdc:dobj-11-ynrj2w41 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-a85hx178 -INFO:root:New activity id created for nmdc:omprc-11-a85hx178 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4nc9p993.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-4nc9p993.1 +INFO:root:New activity id created for nmdc:omprc-11-a85hx178 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2jr51m19.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-2jr51m19.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc0fa28035cb17b7fa2b49660cdecd5d -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-4nc9p993.1/nmdc_wfrqc-11-4nc9p993.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc0fa28035cb17b7fa2b49660cdecd5d nmdc:dobj-11-afs15402 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-2jr51m19.1/nmdc_wfrqc-11-2jr51m19.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc0fa28035cb17b7fa2b49660cdecd5d nmdc:dobj-11-rp90j932 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4nc9p993.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2jr51m19.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-4nc9p993.1/nmdc_wfrqc-11-4nc9p993.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 nmdc:dobj-11-evgfcs07 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrqc-11-2jr51m19.1/nmdc_wfrqc-11-2jr51m19.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e845f221c07e2d2e0f3a2c543ecc0e61 nmdc:dobj-11-sjxzfy79 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nmdc:wfmgas-11-gwmga613.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-cb990r92.1/nmdc_wfmgas-11-cb990r92.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 nmdc:dobj-11-928can06 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d1b97b0544d7d7e50901ad4ebdd8662 nmdc:dobj-11-q9e7xa83 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cb990r92.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9273b988e3cd8a9ef33144e129834eca -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-cb990r92.1/nmdc_wfmgas-11-cb990r92.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9273b988e3cd8a9ef33144e129834eca nmdc:dobj-11-ywjasa91 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9273b988e3cd8a9ef33144e129834eca nmdc:dobj-11-9yxxtg47 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cb990r92.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f1737d3cebfb958e3317a38a1b9638d -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-cb990r92.1/nmdc_wfmgas-11-cb990r92.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f1737d3cebfb958e3317a38a1b9638d nmdc:dobj-11-6zxez942 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f1737d3cebfb958e3317a38a1b9638d nmdc:dobj-11-k9zsfc78 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cb990r92.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:582e46ab7e21c5151d7e01e33fa6fb0f -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-cb990r92.1/nmdc_wfmgas-11-cb990r92.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:582e46ab7e21c5151d7e01e33fa6fb0f nmdc:dobj-11-2hsksq69 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfmgas-11-gwmga613.1/nmdc_wfmgas-11-gwmga613.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:582e46ab7e21c5151d7e01e33fa6fb0f nmdc:dobj-11-zp3x1q37 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cb990r92.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_assembly.agp 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nmdc:wfmgas-11-cb990r92.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gwmga613.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c27d9ea6403f00d6939b94ade5bb19a1 nmdc:wfmgas-11-gwmga613.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-a85hx178 -INFO:root:New activity id created for nmdc:omprc-11-a85hx178 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-m9y9b423.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-m9y9b423.1 +INFO:root:New activity id created for nmdc:omprc-11-a85hx178 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-9vebdj54.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:023a447cc739b46db2c2eeb5d440c352 -INFO:root:New file path 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-m9y9b423.1/nmdc_wfrbt-11-m9y9b423.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58310a3abb2fcde26fbc973721f7ab25 nmdc:dobj-11-z0mvym64 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58310a3abb2fcde26fbc973721f7ab25 nmdc:dobj-11-a81pkc76 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m9y9b423.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bfe90287f58a65b9232f177e7b8429ea -INFO:root:New file path computed for GOTTCHA2 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-m9y9b423.1/nmdc_wfrbt-11-m9y9b423.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eab271aef23285a71c50e411294fa674 nmdc:dobj-11-dc2hba11 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eab271aef23285a71c50e411294fa674 nmdc:dobj-11-adc4s434 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m9y9b423.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd5352c76241c60df60fd8e43e13208d -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-m9y9b423.1/nmdc_wfrbt-11-m9y9b423.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd5352c76241c60df60fd8e43e13208d nmdc:dobj-11-x0758818 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd5352c76241c60df60fd8e43e13208d nmdc:dobj-11-phcpcr52 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m9y9b423.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c4414e23ae24e4c902673b6e271bb62 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-m9y9b423.1/nmdc_wfrbt-11-m9y9b423.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c4414e23ae24e4c902673b6e271bb62 nmdc:dobj-11-crgr4b80 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c4414e23ae24e4c902673b6e271bb62 nmdc:dobj-11-sbe4th36 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m9y9b423.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e57315a6742ed7a21b68d10570bb7247 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-m9y9b423.1/nmdc_wfrbt-11-m9y9b423.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e57315a6742ed7a21b68d10570bb7247 nmdc:dobj-11-sfe9rw89 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e57315a6742ed7a21b68d10570bb7247 nmdc:dobj-11-erc9mv43 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m9y9b423.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:313c08b83a542d886a3985d16fd1071c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-m9y9b423.1/nmdc_wfrbt-11-m9y9b423.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:313c08b83a542d886a3985d16fd1071c nmdc:dobj-11-ebj7h712 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:313c08b83a542d886a3985d16fd1071c nmdc:dobj-11-n0xhe990 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m9y9b423.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a0c25fe760f0f7569f9deec217cccb77 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-m9y9b423.1/nmdc_wfrbt-11-m9y9b423.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0c25fe760f0f7569f9deec217cccb77 nmdc:dobj-11-pd3ajy18 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a85hx178/nmdc:wfrbt-11-9vebdj54.1/nmdc_wfrbt-11-9vebdj54.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0c25fe760f0f7569f9deec217cccb77 nmdc:dobj-11-hpwpjs23 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a85hx178 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m9y9b423.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c27d9ea6403f00d6939b94ade5bb19a1 nmdc:wfrbt-11-m9y9b423.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9vebdj54.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c27d9ea6403f00d6939b94ade5bb19a1 nmdc:wfrbt-11-9vebdj54.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a85hx178 INFO:root:omics_processing_id: nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4acac4ba90588c9923ed2d02d3f516b7 nmdc:dobj-11-r6s9ee95 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4acac4ba90588c9923ed2d02d3f516b7 nmdc:dobj-11-br7xnn26 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0qq1wf68 -INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-j56hcw39.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrqc-11-j56hcw39.1 +INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4n8hth16.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4n8hth16.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0ac82926897b31cf14de8d1b7499250 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrqc-11-j56hcw39.1/nmdc_wfrqc-11-j56hcw39.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0ac82926897b31cf14de8d1b7499250 nmdc:dobj-11-hc6dr457 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrqc-11-4n8hth16.1/nmdc_wfrqc-11-4n8hth16.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0ac82926897b31cf14de8d1b7499250 nmdc:dobj-11-31hb2j55 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j56hcw39.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:929283826cba31853761db726c97ef41 nmdc:wfrqc-11-j56hcw39.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4n8hth16.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:929283826cba31853761db726c97ef41 nmdc:wfrqc-11-4n8hth16.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-0qq1wf68 -INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-30edg819.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-30edg819.1 +INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-40gmqe55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a6f7572a276c5179f403be6dc6f1c6a4 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-30edg819.1/nmdc_wfmgas-11-30edg819.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6f7572a276c5179f403be6dc6f1c6a4 nmdc:dobj-11-qr9ywn51 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6f7572a276c5179f403be6dc6f1c6a4 nmdc:dobj-11-x2k5ng37 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-30edg819.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcbd1a8e38b5b58ca2e25383e46bbe49 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-30edg819.1/nmdc_wfmgas-11-30edg819.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcbd1a8e38b5b58ca2e25383e46bbe49 nmdc:dobj-11-pgbcbc22 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcbd1a8e38b5b58ca2e25383e46bbe49 nmdc:dobj-11-2ttxb627 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-30edg819.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:924abfaf7ce029d1c4f21f0ec9a26be4 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-30edg819.1/nmdc_wfmgas-11-30edg819.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:924abfaf7ce029d1c4f21f0ec9a26be4 nmdc:dobj-11-gcx7sm84 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:924abfaf7ce029d1c4f21f0ec9a26be4 nmdc:dobj-11-063n2923 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-30edg819.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a7912ed567487e12d72e6ffe8737d9b -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-30edg819.1/nmdc_wfmgas-11-30edg819.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a7912ed567487e12d72e6ffe8737d9b nmdc:dobj-11-mm315k97 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a7912ed567487e12d72e6ffe8737d9b nmdc:dobj-11-eezxm709 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-30edg819.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-30edg819.1/nmdc_wfmgas-11-30edg819.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 nmdc:dobj-11-vybg4b21 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfmgas-11-40gmqe55.1/nmdc_wfmgas-11-40gmqe55.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:866e7b796b7dc5d8dede1ec787f2b4f2 nmdc:dobj-11-fphzrg29 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-30edg819.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:929283826cba31853761db726c97ef41 nmdc:wfmgas-11-30edg819.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-40gmqe55.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:929283826cba31853761db726c97ef41 nmdc:wfmgas-11-40gmqe55.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-0qq1wf68 -INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-mj3ma512.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1 +INFO:root:New activity id created for nmdc:omprc-11-0qq1wf68 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-hf4xp029.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fe4f56c3c6533127e224c03f2691de4 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fe4f56c3c6533127e224c03f2691de4 nmdc:dobj-11-0jw8xw32 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fe4f56c3c6533127e224c03f2691de4 nmdc:dobj-11-hyq0nm87 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a4c879329a04e75907617d0ac606fbf -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a4c879329a04e75907617d0ac606fbf nmdc:dobj-11-963fm124 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a4c879329a04e75907617d0ac606fbf nmdc:dobj-11-9m3vqq93 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26e7af846b354ab6f9b0d47037b6ed5d -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26e7af846b354ab6f9b0d47037b6ed5d nmdc:dobj-11-ftrp9856 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26e7af846b354ab6f9b0d47037b6ed5d nmdc:dobj-11-jm16a975 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b362a17555a555ca280dc1a774d8257 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b362a17555a555ca280dc1a774d8257 nmdc:dobj-11-bjh15698 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b362a17555a555ca280dc1a774d8257 nmdc:dobj-11-1gt8fd94 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 nmdc:dobj-11-g93adf94 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b5384a1ca52263f9778c3cb51c2f0b9 nmdc:dobj-11-0feerf41 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f6bac3ea3a4b8bab45b2f089c53b779f -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f6bac3ea3a4b8bab45b2f089c53b779f nmdc:dobj-11-hg58t561 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f6bac3ea3a4b8bab45b2f089c53b779f nmdc:dobj-11-tdffe742 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b6d41063251b5b35d3aa554d3f77f9c9 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6d41063251b5b35d3aa554d3f77f9c9 nmdc:dobj-11-wskc6d29 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6d41063251b5b35d3aa554d3f77f9c9 nmdc:dobj-11-mnwnn493 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eca839aa68f3f38e3cdf969dc6f13929 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eca839aa68f3f38e3cdf969dc6f13929 nmdc:dobj-11-w0ah1381 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eca839aa68f3f38e3cdf969dc6f13929 nmdc:dobj-11-tqyq7a39 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0625ec7747b047894773ecfdd88f49da -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-mj3ma512.1/nmdc_wfrbt-11-mj3ma512.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0625ec7747b047894773ecfdd88f49da nmdc:dobj-11-vy6jwa36 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0qq1wf68/nmdc:wfrbt-11-hf4xp029.1/nmdc_wfrbt-11-hf4xp029.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0625ec7747b047894773ecfdd88f49da nmdc:dobj-11-22js7m47 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-0qq1wf68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-mj3ma512.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:929283826cba31853761db726c97ef41 nmdc:wfrbt-11-mj3ma512.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hf4xp029.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:929283826cba31853761db726c97ef41 nmdc:wfrbt-11-hf4xp029.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-0qq1wf68 INFO:root:omics_processing_id: nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6596e0c6c077b864048f00a68ab6c78 nmdc:dobj-11-3m4gym66 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6596e0c6c077b864048f00a68ab6c78 nmdc:dobj-11-byebvz84 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5v7dy272 -INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5aq70m93.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-5aq70m93.1 +INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8s99sx20.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-8s99sx20.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41e58af45c2187a61af5c75b1f0971fa -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-5aq70m93.1/nmdc_wfrqc-11-5aq70m93.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41e58af45c2187a61af5c75b1f0971fa nmdc:dobj-11-26fvwp86 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-8s99sx20.1/nmdc_wfrqc-11-8s99sx20.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41e58af45c2187a61af5c75b1f0971fa nmdc:dobj-11-3dpye104 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5aq70m93.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8s99sx20.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d3dafccb690b86e43f9de986fa067f1 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-5aq70m93.1/nmdc_wfrqc-11-5aq70m93.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d3dafccb690b86e43f9de986fa067f1 nmdc:dobj-11-1eptx931 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrqc-11-8s99sx20.1/nmdc_wfrqc-11-8s99sx20.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d3dafccb690b86e43f9de986fa067f1 nmdc:dobj-11-185w9x78 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5aq70m93.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfrqc-11-5aq70m93.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8s99sx20.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfrqc-11-8s99sx20.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5v7dy272 -INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7x21nd31.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-7x21nd31.1 +INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-yxc9p229.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b0e3c146dfccbce97dbe291b8a1340cd -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-7x21nd31.1/nmdc_wfmgas-11-7x21nd31.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0e3c146dfccbce97dbe291b8a1340cd nmdc:dobj-11-4ej9gc43 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b0e3c146dfccbce97dbe291b8a1340cd nmdc:dobj-11-7khm3v17 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7x21nd31.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a7a83584cf2763994ff0eff2423bb4fd -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-7x21nd31.1/nmdc_wfmgas-11-7x21nd31.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7a83584cf2763994ff0eff2423bb4fd nmdc:dobj-11-1pg14608 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7a83584cf2763994ff0eff2423bb4fd nmdc:dobj-11-jv3qfc15 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7x21nd31.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:255f27df330491e4fdf0d8ac231c26b5 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-7x21nd31.1/nmdc_wfmgas-11-7x21nd31.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:255f27df330491e4fdf0d8ac231c26b5 nmdc:dobj-11-r8ej5r05 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:255f27df330491e4fdf0d8ac231c26b5 nmdc:dobj-11-7hhfwa66 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7x21nd31.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ed7caaf9ef411a27133ec7867fd0a76 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-7x21nd31.1/nmdc_wfmgas-11-7x21nd31.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ed7caaf9ef411a27133ec7867fd0a76 nmdc:dobj-11-zpzt5556 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ed7caaf9ef411a27133ec7867fd0a76 nmdc:dobj-11-va4gcv60 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7x21nd31.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e4887ca5a5d000d65beade012be35e7 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-7x21nd31.1/nmdc_wfmgas-11-7x21nd31.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e4887ca5a5d000d65beade012be35e7 nmdc:dobj-11-rm5ts039 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfmgas-11-yxc9p229.1/nmdc_wfmgas-11-yxc9p229.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e4887ca5a5d000d65beade012be35e7 nmdc:dobj-11-j434fx61 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7x21nd31.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfmgas-11-7x21nd31.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-yxc9p229.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfmgas-11-yxc9p229.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-5v7dy272 -INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-h7pcaj50.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1 +INFO:root:New activity id created for nmdc:omprc-11-5v7dy272 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-7njf2e10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:892782dc631a5581fcaf93bd5ccc473d -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:892782dc631a5581fcaf93bd5ccc473d nmdc:dobj-11-fjty5e57 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:892782dc631a5581fcaf93bd5ccc473d nmdc:dobj-11-ctkrhn92 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bf41e7e39784afaaac797359815c2f81 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf41e7e39784afaaac797359815c2f81 nmdc:dobj-11-mwgf5t15 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf41e7e39784afaaac797359815c2f81 nmdc:dobj-11-1jwy4q53 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:caf1b3c45796d80e82846e2363001a2b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:caf1b3c45796d80e82846e2363001a2b nmdc:dobj-11-drxx8015 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:caf1b3c45796d80e82846e2363001a2b nmdc:dobj-11-kmemvw27 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74094920c294e1906a83c34654619266 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74094920c294e1906a83c34654619266 nmdc:dobj-11-axzbm130 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74094920c294e1906a83c34654619266 nmdc:dobj-11-dqnmhb65 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf nmdc:dobj-11-2052v956 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1bdc686128b36c2f3761fb7c7c6e9cf nmdc:dobj-11-7vqzdk98 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 nmdc:dobj-11-zmk7x815 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ca8ea542bfd3a50ffc5714cc392e5a6 nmdc:dobj-11-6yxr6c55 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d034667d4d21b468a27705a25c77df36 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d034667d4d21b468a27705a25c77df36 nmdc:dobj-11-j2xg2795 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d034667d4d21b468a27705a25c77df36 nmdc:dobj-11-fqkaad24 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:373a1483931f9805a09a8e492f9a2392 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:373a1483931f9805a09a8e492f9a2392 nmdc:dobj-11-axqjy029 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:373a1483931f9805a09a8e492f9a2392 nmdc:dobj-11-t8qnrr36 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-h7pcaj50.1/nmdc_wfrbt-11-h7pcaj50.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 nmdc:dobj-11-7qb87f53 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5v7dy272/nmdc:wfrbt-11-7njf2e10.1/nmdc_wfrbt-11-7njf2e10.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ddbc090a17b9f4710a0ac8f2bec3b44 nmdc:dobj-11-4cpfch80 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5v7dy272 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h7pcaj50.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfrbt-11-h7pcaj50.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7njf2e10.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1a776a68a3c4a46135a4a1fbb0e98cc3 nmdc:wfrbt-11-7njf2e10.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5v7dy272 INFO:root:omics_processing_id: nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3900b15ebaa5ecba247164c7165d2f38 nmdc:dobj-11-gkzmq055 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3900b15ebaa5ecba247164c7165d2f38 nmdc:dobj-11-sy96px30 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-qg3vxj76 -INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-j9e0cc97.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-j9e0cc97.1 +INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5eajga08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-5eajga08.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1978062c63a0079d779f0f1a820296e7 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-j9e0cc97.1/nmdc_wfrqc-11-j9e0cc97.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1978062c63a0079d779f0f1a820296e7 nmdc:dobj-11-qrpk2e08 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-5eajga08.1/nmdc_wfrqc-11-5eajga08.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1978062c63a0079d779f0f1a820296e7 nmdc:dobj-11-ewvb7m77 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j9e0cc97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5eajga08.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8010e289e2cbcb88dc55cae1c5082851 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-j9e0cc97.1/nmdc_wfrqc-11-j9e0cc97.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8010e289e2cbcb88dc55cae1c5082851 nmdc:dobj-11-98wnnr07 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrqc-11-5eajga08.1/nmdc_wfrqc-11-5eajga08.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8010e289e2cbcb88dc55cae1c5082851 nmdc:dobj-11-r1t59c15 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j9e0cc97.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfrqc-11-j9e0cc97.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5eajga08.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfrqc-11-5eajga08.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-qg3vxj76 -INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6t9tra08.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-6t9tra08.1 +INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7mgfza58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebe16a3e4d650652f0a39e930872a158 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-6t9tra08.1/nmdc_wfmgas-11-6t9tra08.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebe16a3e4d650652f0a39e930872a158 nmdc:dobj-11-p9xkv620 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebe16a3e4d650652f0a39e930872a158 nmdc:dobj-11-0gnm2519 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6t9tra08.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e986afe1a3c118ea3c98e4915839776a -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-6t9tra08.1/nmdc_wfmgas-11-6t9tra08.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e986afe1a3c118ea3c98e4915839776a nmdc:dobj-11-5jxerg48 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e986afe1a3c118ea3c98e4915839776a nmdc:dobj-11-11e5qf10 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6t9tra08.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b52a8ce01e5e3e6ed03ab22e2d7a2bce -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-6t9tra08.1/nmdc_wfmgas-11-6t9tra08.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b52a8ce01e5e3e6ed03ab22e2d7a2bce nmdc:dobj-11-32z6jm61 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b52a8ce01e5e3e6ed03ab22e2d7a2bce nmdc:dobj-11-skc5t546 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6t9tra08.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5475a070df52f1702058521b8ebfdd81 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-6t9tra08.1/nmdc_wfmgas-11-6t9tra08.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5475a070df52f1702058521b8ebfdd81 nmdc:dobj-11-39gdtm36 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5475a070df52f1702058521b8ebfdd81 nmdc:dobj-11-694fv113 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6t9tra08.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:555814c0b6ca44e02f29d8bcc90b41bc -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-6t9tra08.1/nmdc_wfmgas-11-6t9tra08.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:555814c0b6ca44e02f29d8bcc90b41bc nmdc:dobj-11-9pvfkf19 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfmgas-11-7mgfza58.1/nmdc_wfmgas-11-7mgfza58.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:555814c0b6ca44e02f29d8bcc90b41bc nmdc:dobj-11-xedxhg67 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6t9tra08.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfmgas-11-6t9tra08.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7mgfza58.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfmgas-11-7mgfza58.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-qg3vxj76 -INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qfda8p57.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1 +INFO:root:New activity id created for nmdc:omprc-11-qg3vxj76 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-rpwjgc71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29d7979ce172e99795e2ba9f5b27ee22 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29d7979ce172e99795e2ba9f5b27ee22 nmdc:dobj-11-jckwdy89 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29d7979ce172e99795e2ba9f5b27ee22 nmdc:dobj-11-ek8xpg10 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:406855169336718091ad1e568e6fb418 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:406855169336718091ad1e568e6fb418 nmdc:dobj-11-hxe13q12 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:406855169336718091ad1e568e6fb418 nmdc:dobj-11-d18vrn57 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bdeb595483c185c42c5245d53f2a0c7 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bdeb595483c185c42c5245d53f2a0c7 nmdc:dobj-11-sgkt1r98 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bdeb595483c185c42c5245d53f2a0c7 nmdc:dobj-11-mmc7h068 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 nmdc:dobj-11-gs807c50 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fdf8a5afddd816a6270d4d5fdd4e947 nmdc:dobj-11-5kf55s07 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:640b149083a469e3075770a03c5d20e0 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:640b149083a469e3075770a03c5d20e0 nmdc:dobj-11-fhv19993 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:640b149083a469e3075770a03c5d20e0 nmdc:dobj-11-0b76xt33 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ed5a5a06a47e85f77df6dab7a91039b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ed5a5a06a47e85f77df6dab7a91039b nmdc:dobj-11-421vgp81 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ed5a5a06a47e85f77df6dab7a91039b nmdc:dobj-11-e6g4te80 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d52e6df0a0986f444253392961e943d4 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d52e6df0a0986f444253392961e943d4 nmdc:dobj-11-nbqbzd60 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d52e6df0a0986f444253392961e943d4 nmdc:dobj-11-g73s1x71 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c67283d3ccf71f511b8460b8c1cc692a -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67283d3ccf71f511b8460b8c1cc692a nmdc:dobj-11-ffcaxc06 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c67283d3ccf71f511b8460b8c1cc692a nmdc:dobj-11-fftmye10 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5108d260ae1b95d58f3706d35ccfb83f -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-qfda8p57.1/nmdc_wfrbt-11-qfda8p57.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5108d260ae1b95d58f3706d35ccfb83f nmdc:dobj-11-qf22r841 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qg3vxj76/nmdc:wfrbt-11-rpwjgc71.1/nmdc_wfrbt-11-rpwjgc71.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5108d260ae1b95d58f3706d35ccfb83f nmdc:dobj-11-1917kf97 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-qg3vxj76 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qfda8p57.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfrbt-11-qfda8p57.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rpwjgc71.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ff77f0ba8f68c8863f2c2743e902e335 nmdc:wfrbt-11-rpwjgc71.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-qg3vxj76 +INFO:root:omics_processing_id: nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2b267f00e22a74e94e6dd75fe0531f0 nmdc:dobj-11-zbzrzp68 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-2bmkj745 +INFO:root:New activity id created for nmdc:omprc-11-2bmkj745 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-twbygm96.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-twbygm96.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8489d99afe00144c49dff91e65525ed8 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-twbygm96.1/nmdc_wfrqc-11-twbygm96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8489d99afe00144c49dff91e65525ed8 nmdc:dobj-11-n9rxdv84 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-twbygm96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5055fb882d43f52d949a704b5233660b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfrqc-11-twbygm96.1/nmdc_wfrqc-11-twbygm96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5055fb882d43f52d949a704b5233660b nmdc:dobj-11-j4x99251 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-twbygm96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ce4f08538d6f705abc1505ed9cc8493b nmdc:wfrqc-11-twbygm96.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-2bmkj745 +INFO:root:New activity id created for nmdc:omprc-11-2bmkj745 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4hs8k180.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f317d8792266dcba89f37e43a9270484 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f317d8792266dcba89f37e43a9270484 nmdc:dobj-11-af1fh827 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77e2eafe0f2c9428c9663454add7cfc0 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77e2eafe0f2c9428c9663454add7cfc0 nmdc:dobj-11-7tkyrd91 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66059c8a9b877afa93d5c74bfc19a9b3 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66059c8a9b877afa93d5c74bfc19a9b3 nmdc:dobj-11-n6ya2v37 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d11b47e57ad17ed8afbce02429204fb +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d11b47e57ad17ed8afbce02429204fb nmdc:dobj-11-3k1ev303 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52bcd468266f72732c5f7b07e3e0d353 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2bmkj745/nmdc:wfmgas-11-4hs8k180.1/nmdc_wfmgas-11-4hs8k180.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52bcd468266f72732c5f7b07e3e0d353 nmdc:dobj-11-cj3jzc94 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4hs8k180.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ce4f08538d6f705abc1505ed9cc8493b nmdc:wfmgas-11-4hs8k180.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-2bmkj745 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-2bmkj745 INFO:root:omics_processing_id: nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a37ea20e51282596cf799605d6e912c nmdc:dobj-11-f5jkk727 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a37ea20e51282596cf799605d6e912c nmdc:dobj-11-82yj8e41 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-s8v93g59 -INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g8mcr665.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-g8mcr665.1 +INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cgtexk57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-cgtexk57.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ecbf0512652b4a76930b42338fe069a6 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-g8mcr665.1/nmdc_wfrqc-11-g8mcr665.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ecbf0512652b4a76930b42338fe069a6 nmdc:dobj-11-926f5x62 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-cgtexk57.1/nmdc_wfrqc-11-cgtexk57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ecbf0512652b4a76930b42338fe069a6 nmdc:dobj-11-n5wtf165 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g8mcr665.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cgtexk57.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fac6c0329d3d2dbecb4f4537de15c65b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-g8mcr665.1/nmdc_wfrqc-11-g8mcr665.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fac6c0329d3d2dbecb4f4537de15c65b nmdc:dobj-11-nnbzpg48 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrqc-11-cgtexk57.1/nmdc_wfrqc-11-cgtexk57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fac6c0329d3d2dbecb4f4537de15c65b nmdc:dobj-11-n4q5q025 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g8mcr665.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfrqc-11-g8mcr665.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cgtexk57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfrqc-11-cgtexk57.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-s8v93g59 -INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-66m73n09.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-66m73n09.1 +INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-00w5aw47.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fa9ad423eab6ca57746d536c3da9d9c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-66m73n09.1/nmdc_wfmgas-11-66m73n09.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa9ad423eab6ca57746d536c3da9d9c nmdc:dobj-11-xdzh0607 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fa9ad423eab6ca57746d536c3da9d9c nmdc:dobj-11-d7ymcr19 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-66m73n09.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:774ba656ecf709dc459f44979b1b4f65 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-66m73n09.1/nmdc_wfmgas-11-66m73n09.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:774ba656ecf709dc459f44979b1b4f65 nmdc:dobj-11-e8bv0k81 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:774ba656ecf709dc459f44979b1b4f65 nmdc:dobj-11-zbk1mq28 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-66m73n09.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:595450b1e3ef7af7796b1c8d3c42e37c -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-66m73n09.1/nmdc_wfmgas-11-66m73n09.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:595450b1e3ef7af7796b1c8d3c42e37c nmdc:dobj-11-bprsm720 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:595450b1e3ef7af7796b1c8d3c42e37c nmdc:dobj-11-7mq3da34 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-66m73n09.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1eb1559a69b20af687e645bd94e28602 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-66m73n09.1/nmdc_wfmgas-11-66m73n09.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1eb1559a69b20af687e645bd94e28602 nmdc:dobj-11-f16hr771 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1eb1559a69b20af687e645bd94e28602 nmdc:dobj-11-c11gax59 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-66m73n09.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4daeb929d6c8b2a7068455a5484a14aa -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-66m73n09.1/nmdc_wfmgas-11-66m73n09.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4daeb929d6c8b2a7068455a5484a14aa nmdc:dobj-11-4pxrn238 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfmgas-11-00w5aw47.1/nmdc_wfmgas-11-00w5aw47.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4daeb929d6c8b2a7068455a5484a14aa nmdc:dobj-11-67at7x39 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-66m73n09.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfmgas-11-66m73n09.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-00w5aw47.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfmgas-11-00w5aw47.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-s8v93g59 -INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-crbqne77.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1 +INFO:root:New activity id created for nmdc:omprc-11-s8v93g59 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qs1k3m03.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa219ce5583bc97f9e9bf1df90f0966e -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa219ce5583bc97f9e9bf1df90f0966e nmdc:dobj-11-zrqez506 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa219ce5583bc97f9e9bf1df90f0966e nmdc:dobj-11-rrxey108 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80ec1cca49e6f46f5441f778d39334a7 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80ec1cca49e6f46f5441f778d39334a7 nmdc:dobj-11-6ndvy576 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80ec1cca49e6f46f5441f778d39334a7 nmdc:dobj-11-y9rzvh52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f8868d11a879f275d4d6143bf7cd1c65 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8868d11a879f275d4d6143bf7cd1c65 nmdc:dobj-11-6s3s3d28 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8868d11a879f275d4d6143bf7cd1c65 nmdc:dobj-11-a0ymsb82 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d9289f68e03bcf582229ef6a5ea0a67 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d9289f68e03bcf582229ef6a5ea0a67 nmdc:dobj-11-fkz2hz53 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d9289f68e03bcf582229ef6a5ea0a67 nmdc:dobj-11-j8692s19 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13fcb7a41f5d14f84ecdafee883857ca -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13fcb7a41f5d14f84ecdafee883857ca nmdc:dobj-11-5r667p56 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13fcb7a41f5d14f84ecdafee883857ca nmdc:dobj-11-yjpxh632 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61d1f1838d983c1d5ac232440460893c -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61d1f1838d983c1d5ac232440460893c nmdc:dobj-11-pnkqa848 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61d1f1838d983c1d5ac232440460893c nmdc:dobj-11-8ez4yv93 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1dd5ec7ab305465deb9f38689a320709 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1dd5ec7ab305465deb9f38689a320709 nmdc:dobj-11-bg0r4648 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1dd5ec7ab305465deb9f38689a320709 nmdc:dobj-11-w4teyd97 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32787a13d8fe71997023f82eee110dbd -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32787a13d8fe71997023f82eee110dbd nmdc:dobj-11-bybn1b82 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32787a13d8fe71997023f82eee110dbd nmdc:dobj-11-f8cs4v57 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-crbqne77.1/nmdc_wfrbt-11-crbqne77.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 nmdc:dobj-11-h9bcs459 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-s8v93g59/nmdc:wfrbt-11-qs1k3m03.1/nmdc_wfrbt-11-qs1k3m03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3bc08e30061bfbd7cbe642d7e2277f8 nmdc:dobj-11-y28h0f09 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-s8v93g59 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crbqne77.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfrbt-11-crbqne77.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qs1k3m03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:bcb23daa73fecf814f1c090e7c42d382 nmdc:wfrbt-11-qs1k3m03.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-s8v93g59 INFO:root:omics_processing_id: nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a68418156612ccea5ffa4c2d9b6a6114 nmdc:dobj-11-ndr5ac62 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a68418156612ccea5ffa4c2d9b6a6114 nmdc:dobj-11-9yj9sw37 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-3q02ny85 -INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-301b5b09.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-301b5b09.1 +INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-nzshma95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-nzshma95.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e4cc4c19106a72aaac4c83cf4a2a286 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-301b5b09.1/nmdc_wfrqc-11-301b5b09.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e4cc4c19106a72aaac4c83cf4a2a286 nmdc:dobj-11-tgv45v21 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-nzshma95.1/nmdc_wfrqc-11-nzshma95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e4cc4c19106a72aaac4c83cf4a2a286 nmdc:dobj-11-z2514j15 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-301b5b09.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-nzshma95.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7b70f32c6453eeaa76148503d947956 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-301b5b09.1/nmdc_wfrqc-11-301b5b09.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7b70f32c6453eeaa76148503d947956 nmdc:dobj-11-5b64v021 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrqc-11-nzshma95.1/nmdc_wfrqc-11-nzshma95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7b70f32c6453eeaa76148503d947956 nmdc:dobj-11-b6bmpn85 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-301b5b09.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfrqc-11-301b5b09.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-nzshma95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfrqc-11-nzshma95.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-3q02ny85 -INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qbkhbg19.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-qbkhbg19.1 +INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jc0jq395.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:290dacce7b0033b70ac3d9ee81ebe834 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-qbkhbg19.1/nmdc_wfmgas-11-qbkhbg19.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:290dacce7b0033b70ac3d9ee81ebe834 nmdc:dobj-11-ny6j6d66 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:290dacce7b0033b70ac3d9ee81ebe834 nmdc:dobj-11-vn9cky02 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qbkhbg19.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3abff3c9b8c81420662e2191a19a49e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-qbkhbg19.1/nmdc_wfmgas-11-qbkhbg19.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3abff3c9b8c81420662e2191a19a49e nmdc:dobj-11-6vp5r341 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3abff3c9b8c81420662e2191a19a49e nmdc:dobj-11-0z0pfj11 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qbkhbg19.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-qbkhbg19.1/nmdc_wfmgas-11-qbkhbg19.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 nmdc:dobj-11-vhdr2844 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c012b2c5033ba6dbbe7aa2709a205eb8 nmdc:dobj-11-t2c0zq52 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qbkhbg19.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93d97ed02fab960bdaa49abd9ab61861 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-qbkhbg19.1/nmdc_wfmgas-11-qbkhbg19.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93d97ed02fab960bdaa49abd9ab61861 nmdc:dobj-11-b2cs4125 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93d97ed02fab960bdaa49abd9ab61861 nmdc:dobj-11-5372j728 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qbkhbg19.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75ad27df82034cd6dc438d12a13127d4 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-qbkhbg19.1/nmdc_wfmgas-11-qbkhbg19.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75ad27df82034cd6dc438d12a13127d4 nmdc:dobj-11-qkr9d327 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfmgas-11-jc0jq395.1/nmdc_wfmgas-11-jc0jq395.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75ad27df82034cd6dc438d12a13127d4 nmdc:dobj-11-r5vxxm82 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qbkhbg19.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfmgas-11-qbkhbg19.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jc0jq395.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfmgas-11-jc0jq395.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-3q02ny85 -INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-k06d2g33.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1 +INFO:root:New activity id created for nmdc:omprc-11-3q02ny85 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-3657n135.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b3bbea86a89750d04e296d2ca7516a0 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b3bbea86a89750d04e296d2ca7516a0 nmdc:dobj-11-kapwb478 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b3bbea86a89750d04e296d2ca7516a0 nmdc:dobj-11-a0qwxe52 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:edf382163c1e19d7e44a5e76b78ed37d -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:edf382163c1e19d7e44a5e76b78ed37d nmdc:dobj-11-y79hhy42 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:edf382163c1e19d7e44a5e76b78ed37d nmdc:dobj-11-qkzdhe19 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4fbea941838df056f23d2f5e5e623fa8 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fbea941838df056f23d2f5e5e623fa8 nmdc:dobj-11-9gq72556 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fbea941838df056f23d2f5e5e623fa8 nmdc:dobj-11-xezgy490 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45a7b29cf3507c83dd6cb7391ae325a1 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45a7b29cf3507c83dd6cb7391ae325a1 nmdc:dobj-11-tpfka898 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45a7b29cf3507c83dd6cb7391ae325a1 nmdc:dobj-11-w095hm93 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:749a526680822969a72c2bdefc934870 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:749a526680822969a72c2bdefc934870 nmdc:dobj-11-taav0k63 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:749a526680822969a72c2bdefc934870 nmdc:dobj-11-mvd1f384 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3302d9463d73c2f5b56077476d3072d4 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3302d9463d73c2f5b56077476d3072d4 nmdc:dobj-11-thv8ks54 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3302d9463d73c2f5b56077476d3072d4 nmdc:dobj-11-c6crwv67 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3b9b92b02d84dcaa6c1c2f9da9aa5e2 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3b9b92b02d84dcaa6c1c2f9da9aa5e2 nmdc:dobj-11-hqdvr794 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3b9b92b02d84dcaa6c1c2f9da9aa5e2 nmdc:dobj-11-4qzh3183 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18b9a6ae7e24472c382475d68e148242 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18b9a6ae7e24472c382475d68e148242 nmdc:dobj-11-hsts9s45 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18b9a6ae7e24472c382475d68e148242 nmdc:dobj-11-7e4cm314 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fa137a7216d90e9b548ad023fde787a -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-k06d2g33.1/nmdc_wfrbt-11-k06d2g33.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fa137a7216d90e9b548ad023fde787a nmdc:dobj-11-hxf73s58 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3q02ny85/nmdc:wfrbt-11-3657n135.1/nmdc_wfrbt-11-3657n135.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fa137a7216d90e9b548ad023fde787a nmdc:dobj-11-47vak920 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3q02ny85 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-k06d2g33.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfrbt-11-k06d2g33.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3657n135.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cddfe7e84d03fedd2eac57a64a6b02d8 nmdc:wfrbt-11-3657n135.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-3q02ny85 INFO:root:omics_processing_id: nmdc:omprc-11-31w8s533 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrqc-11-ehe6jr91.1/nmdc_wfrqc-11-ehe6jr91.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5639bbf52ada23bc315b10c45359dfb nmdc:dobj-11-grt43j79 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrqc-11-kgmq7098.1/nmdc_wfrqc-11-kgmq7098.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5639bbf52ada23bc315b10c45359dfb nmdc:dobj-11-e93qxw87 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ehe6jr91.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kgmq7098.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e14de4ed6b5106872fece8bc56520b5 -INFO:root:New file path computed for QC Statistics: 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nmdc:65ad1bfe5efd2930e32ae347949ff099 nmdc:dobj-11-kdqs7x97 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfmgas-11-nh72cw94.1/nmdc_wfmgas-11-nh72cw94.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65ad1bfe5efd2930e32ae347949ff099 nmdc:dobj-11-s0hbne42 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vg8trk39.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-nh72cw94.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b2bc0938d8a400158b4888cb7acafd0 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfmgas-11-vg8trk39.1/nmdc_wfmgas-11-vg8trk39.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b2bc0938d8a400158b4888cb7acafd0 nmdc:dobj-11-g4d42w94 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file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd142d29a7556780b70685ff50e64ddd nmdc:dobj-11-8ghr0y96 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x7e1g950.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1daaf5390937d482524357e452c0b284 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-x7e1g950.1/nmdc_wfrbt-11-x7e1g950.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1daaf5390937d482524357e452c0b284 nmdc:dobj-11-yp7vk561 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1daaf5390937d482524357e452c0b284 nmdc:dobj-11-420hw949 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x7e1g950.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:782c9ce36f94f7d5e8da1f080a844cae -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-x7e1g950.1/nmdc_wfrbt-11-x7e1g950.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:782c9ce36f94f7d5e8da1f080a844cae nmdc:dobj-11-eq5d3c33 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:782c9ce36f94f7d5e8da1f080a844cae nmdc:dobj-11-7pywzy67 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x7e1g950.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5eb6a360229b07828652233cdf79b789 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-x7e1g950.1/nmdc_wfrbt-11-x7e1g950.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5eb6a360229b07828652233cdf79b789 nmdc:dobj-11-s51p3j89 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5eb6a360229b07828652233cdf79b789 nmdc:dobj-11-9et7ws26 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x7e1g950.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9014a78668556a1203cf95cca1cfb1c -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-x7e1g950.1/nmdc_wfrbt-11-x7e1g950.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9014a78668556a1203cf95cca1cfb1c nmdc:dobj-11-msr8vh35 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-31w8s533/nmdc:wfrbt-11-62rape45.1/nmdc_wfrbt-11-62rape45.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9014a78668556a1203cf95cca1cfb1c nmdc:dobj-11-jgczy327 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-31w8s533 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x7e1g950.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f881bb4b70fb1271442006a03252de42 nmdc:wfrbt-11-x7e1g950.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-62rape45.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f881bb4b70fb1271442006a03252de42 nmdc:wfrbt-11-62rape45.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-31w8s533 INFO:root:omics_processing_id: nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2437e48c81f26729595351c727f94b0b nmdc:dobj-11-k7d3a991 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2437e48c81f26729595351c727f94b0b nmdc:dobj-11-ynsgf807 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-pjs63190 -INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-pphjd856.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-pphjd856.1 +INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qdgsx531.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-qdgsx531.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc0272c1e6efdd2134e32d05081af9c6 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-pphjd856.1/nmdc_wfrqc-11-pphjd856.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc0272c1e6efdd2134e32d05081af9c6 nmdc:dobj-11-zh3c2t60 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-qdgsx531.1/nmdc_wfrqc-11-qdgsx531.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc0272c1e6efdd2134e32d05081af9c6 nmdc:dobj-11-38d5fp07 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pphjd856.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qdgsx531.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ffb83977e0251de1215c15725b707af -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-pphjd856.1/nmdc_wfrqc-11-pphjd856.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ffb83977e0251de1215c15725b707af nmdc:dobj-11-x58eh206 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrqc-11-qdgsx531.1/nmdc_wfrqc-11-qdgsx531.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ffb83977e0251de1215c15725b707af nmdc:dobj-11-fgp8vq41 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pphjd856.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfrqc-11-pphjd856.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qdgsx531.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfrqc-11-qdgsx531.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-pjs63190 -INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-58rnea93.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-58rnea93.1 +INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-kc7nbd48.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea286f9c66a89fd51e43db2aefa7c6c6 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-58rnea93.1/nmdc_wfmgas-11-58rnea93.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea286f9c66a89fd51e43db2aefa7c6c6 nmdc:dobj-11-khxzq935 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea286f9c66a89fd51e43db2aefa7c6c6 nmdc:dobj-11-cv5xgq53 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-58rnea93.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d0b930e87f60cc176d4df3eee15d3d8 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-58rnea93.1/nmdc_wfmgas-11-58rnea93.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d0b930e87f60cc176d4df3eee15d3d8 nmdc:dobj-11-ge8q9e10 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d0b930e87f60cc176d4df3eee15d3d8 nmdc:dobj-11-1624ka27 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-58rnea93.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:719666ff80b27a20d42663db3a0a45da -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-58rnea93.1/nmdc_wfmgas-11-58rnea93.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:719666ff80b27a20d42663db3a0a45da nmdc:dobj-11-5kgx0p57 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:719666ff80b27a20d42663db3a0a45da nmdc:dobj-11-n5tfw203 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-58rnea93.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b701b1436f30f504c50c4effdceb5904 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-58rnea93.1/nmdc_wfmgas-11-58rnea93.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b701b1436f30f504c50c4effdceb5904 nmdc:dobj-11-h43g2p59 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-kc7nbd48.1/nmdc_wfmgas-11-kc7nbd48.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b701b1436f30f504c50c4effdceb5904 nmdc:dobj-11-19eqfk34 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-58rnea93.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-kc7nbd48.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3f1be6f767137fa782d673e325d8c31 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfmgas-11-58rnea93.1/nmdc_wfmgas-11-58rnea93.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3f1be6f767137fa782d673e325d8c31 nmdc:dobj-11-banmr230 +INFO:root:New file path computed for Assembly Coverage BAM: 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nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2wrhsc77.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1 +INFO:root:New activity id created for nmdc:omprc-11-pjs63190 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ts7ntd65.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 nmdc:dobj-11-eqd52m87 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ff6a3536bf058d3dc1ce3889633e7b1 nmdc:dobj-11-zgwkvd67 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41c4bbd0be4113dffbb442ab0f3e309b -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41c4bbd0be4113dffbb442ab0f3e309b nmdc:dobj-11-rhkgq624 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41c4bbd0be4113dffbb442ab0f3e309b nmdc:dobj-11-fambg195 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e9bf0f6d2656616f08d44ea74d3037f3 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9bf0f6d2656616f08d44ea74d3037f3 nmdc:dobj-11-zmbq8m38 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9bf0f6d2656616f08d44ea74d3037f3 nmdc:dobj-11-vzyqvr73 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62dfa71b652641a0ff8b3df2a6b888bb -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62dfa71b652641a0ff8b3df2a6b888bb nmdc:dobj-11-vmng2e51 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62dfa71b652641a0ff8b3df2a6b888bb nmdc:dobj-11-mva7b604 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2a5c750201b5f5f5f7a14038aec540e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2a5c750201b5f5f5f7a14038aec540e nmdc:dobj-11-b54qj074 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2a5c750201b5f5f5f7a14038aec540e nmdc:dobj-11-9pn5b285 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce nmdc:dobj-11-50qzgk90 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9bf7881e9fe6ce2ec682e5f46d7a7ce nmdc:dobj-11-hyhxc645 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fec6a6cd5c7c52b4a925bab8656402e9 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fec6a6cd5c7c52b4a925bab8656402e9 nmdc:dobj-11-dfr5xs55 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fec6a6cd5c7c52b4a925bab8656402e9 nmdc:dobj-11-dtj37f59 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b6a54c1c9528598d4b7271280fb3a62 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b6a54c1c9528598d4b7271280fb3a62 nmdc:dobj-11-wx4c4w70 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b6a54c1c9528598d4b7271280fb3a62 nmdc:dobj-11-va6aea29 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-2wrhsc77.1/nmdc_wfrbt-11-2wrhsc77.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 nmdc:dobj-11-151t0124 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pjs63190/nmdc:wfrbt-11-ts7ntd65.1/nmdc_wfrbt-11-ts7ntd65.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b13f3236ea4bc6d1bae845b252b3dc3 nmdc:dobj-11-xjvrk253 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-pjs63190 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2wrhsc77.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfrbt-11-2wrhsc77.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ts7ntd65.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:21d73d2d997cab86c64a915ff5b2983d nmdc:wfrbt-11-ts7ntd65.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-pjs63190 +INFO:root:omics_processing_id: nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:989711381573525c3c32f77fb8b4bcf7 nmdc:dobj-11-xq4x3h81 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-h63w0665 +INFO:root:New activity id created for nmdc:omprc-11-h63w0665 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9ndv5j30.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-9ndv5j30.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3516d985a9c9d91a8990c3ee286a30c7 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-9ndv5j30.1/nmdc_wfrqc-11-9ndv5j30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3516d985a9c9d91a8990c3ee286a30c7 nmdc:dobj-11-y3wbm168 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ndv5j30.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60057503ef107ce2ae3fa46853481d79 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfrqc-11-9ndv5j30.1/nmdc_wfrqc-11-9ndv5j30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60057503ef107ce2ae3fa46853481d79 nmdc:dobj-11-yevt4n26 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9ndv5j30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2e384ea11627508ae28658217bdfe3b3 nmdc:wfrqc-11-9ndv5j30.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-h63w0665 +INFO:root:New activity id created for nmdc:omprc-11-h63w0665 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vfb4n927.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c66004718621b2127afcba96ee230ddf +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c66004718621b2127afcba96ee230ddf nmdc:dobj-11-qqs4rh12 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e62e7b70866da3b4e75dabd7401c3b7e +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e62e7b70866da3b4e75dabd7401c3b7e nmdc:dobj-11-6x1phn33 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6f633eb389d3e3ec440533279471a633 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f633eb389d3e3ec440533279471a633 nmdc:dobj-11-m6rm3c73 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7bef881cb661e723a7851e58e8c18748 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bef881cb661e723a7851e58e8c18748 nmdc:dobj-11-gxw2e777 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d2f4eac3e8138a1b6d25a1b576d5745 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-h63w0665/nmdc:wfmgas-11-vfb4n927.1/nmdc_wfmgas-11-vfb4n927.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d2f4eac3e8138a1b6d25a1b576d5745 nmdc:dobj-11-63x0bk48 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vfb4n927.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:2e384ea11627508ae28658217bdfe3b3 nmdc:wfmgas-11-vfb4n927.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-h63w0665 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-h63w0665 INFO:root:omics_processing_id: nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8139981465fa40b6488805919efdbcd6 nmdc:dobj-11-2k1gqh15 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8139981465fa40b6488805919efdbcd6 nmdc:dobj-11-qqtrj363 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-9mhqsm53 -INFO:root:New activity id created for nmdc:omprc-11-9mhqsm53 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rh4zm194.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-rh4zm194.1 +INFO:root:New activity id created for nmdc:omprc-11-9mhqsm53 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-47yj2157.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-47yj2157.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c3a86b1ffa0fb1ede94b75ce78e6573 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-rh4zm194.1/nmdc_wfrqc-11-rh4zm194.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c3a86b1ffa0fb1ede94b75ce78e6573 nmdc:dobj-11-aynybd35 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-47yj2157.1/nmdc_wfrqc-11-47yj2157.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c3a86b1ffa0fb1ede94b75ce78e6573 nmdc:dobj-11-njg5ba32 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rh4zm194.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-47yj2157.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed5b50999ee0058ab9331a6ddb7fbf0a -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-rh4zm194.1/nmdc_wfrqc-11-rh4zm194.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed5b50999ee0058ab9331a6ddb7fbf0a nmdc:dobj-11-vn38a310 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrqc-11-47yj2157.1/nmdc_wfrqc-11-47yj2157.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed5b50999ee0058ab9331a6ddb7fbf0a nmdc:dobj-11-t8283r17 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rh4zm194.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfrqc-11-rh4zm194.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-47yj2157.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfrqc-11-47yj2157.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-9mhqsm53 -INFO:root:New activity id created for nmdc:omprc-11-9mhqsm53 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-415z7888.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-415z7888.1 +INFO:root:New activity id created for nmdc:omprc-11-9mhqsm53 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-892pk330.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:173d4154bb8b27c533dc27c574ba9d9b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-415z7888.1/nmdc_wfmgas-11-415z7888.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:173d4154bb8b27c533dc27c574ba9d9b nmdc:dobj-11-9bg2yc03 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:173d4154bb8b27c533dc27c574ba9d9b nmdc:dobj-11-kwnf2z67 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-415z7888.1_contigs.fna 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nmdc_wfmgas-11-892pk330.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c014933ebb8bec7bfce37f700dbe8618 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-415z7888.1/nmdc_wfmgas-11-415z7888.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c014933ebb8bec7bfce37f700dbe8618 nmdc:dobj-11-vxd5ch76 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c014933ebb8bec7bfce37f700dbe8618 nmdc:dobj-11-jsvfnj12 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-415z7888.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-892pk330.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f889179bcb6e0d10554668e2a6602c0 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-415z7888.1/nmdc_wfmgas-11-415z7888.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f889179bcb6e0d10554668e2a6602c0 nmdc:dobj-11-c0jh9d07 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f889179bcb6e0d10554668e2a6602c0 nmdc:dobj-11-frt4q535 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-415z7888.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-892pk330.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4560c4ae0d6c207d46823433078d6454 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-415z7888.1/nmdc_wfmgas-11-415z7888.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4560c4ae0d6c207d46823433078d6454 nmdc:dobj-11-krdx5639 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfmgas-11-892pk330.1/nmdc_wfmgas-11-892pk330.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4560c4ae0d6c207d46823433078d6454 nmdc:dobj-11-31msgq82 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-415z7888.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfmgas-11-415z7888.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-892pk330.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfmgas-11-892pk330.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-9mhqsm53 -INFO:root:New activity id created for nmdc:omprc-11-9mhqsm53 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-s7aekt81.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1 +INFO:root:New activity id created for nmdc:omprc-11-9mhqsm53 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-zqakwz80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:54d8452e9d66b0cd889e24b258f89a40 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54d8452e9d66b0cd889e24b258f89a40 nmdc:dobj-11-c75z5h96 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54d8452e9d66b0cd889e24b258f89a40 nmdc:dobj-11-309dg064 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:68d3e76cd0e9dc8f1d9e5222d9ba3e4f -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68d3e76cd0e9dc8f1d9e5222d9ba3e4f nmdc:dobj-11-6mcn7g83 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68d3e76cd0e9dc8f1d9e5222d9ba3e4f nmdc:dobj-11-vnjzwv47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52be54f58b105b1b32e97eb7e79b024e -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52be54f58b105b1b32e97eb7e79b024e nmdc:dobj-11-e9ef1d54 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52be54f58b105b1b32e97eb7e79b024e nmdc:dobj-11-wbsh2k64 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12de38964eda24a7d5ec260beb1584a5 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12de38964eda24a7d5ec260beb1584a5 nmdc:dobj-11-39rc6767 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12de38964eda24a7d5ec260beb1584a5 nmdc:dobj-11-cxbhht46 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92f6a01b60199cdd659291e6b69f2ca9 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92f6a01b60199cdd659291e6b69f2ca9 nmdc:dobj-11-9wejw814 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92f6a01b60199cdd659291e6b69f2ca9 nmdc:dobj-11-jwvn2c52 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e904b455b89d83441fd6a5d4ceec8f07 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e904b455b89d83441fd6a5d4ceec8f07 nmdc:dobj-11-7v3fgm58 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e904b455b89d83441fd6a5d4ceec8f07 nmdc:dobj-11-4n2acq18 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:225829fc2562b2b761aab02e1fdfd752 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:225829fc2562b2b761aab02e1fdfd752 nmdc:dobj-11-aqttpv78 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:225829fc2562b2b761aab02e1fdfd752 nmdc:dobj-11-h62ghd11 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:980c2b734fe7f0949c431109ba0bc757 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:980c2b734fe7f0949c431109ba0bc757 nmdc:dobj-11-k2yzhy96 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:980c2b734fe7f0949c431109ba0bc757 nmdc:dobj-11-9zvs6s37 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c28210f3071feeb1b190c2419ba39fd1 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-s7aekt81.1/nmdc_wfrbt-11-s7aekt81.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28210f3071feeb1b190c2419ba39fd1 nmdc:dobj-11-y90fbg74 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9mhqsm53/nmdc:wfrbt-11-zqakwz80.1/nmdc_wfrbt-11-zqakwz80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28210f3071feeb1b190c2419ba39fd1 nmdc:dobj-11-qzgjm071 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9mhqsm53 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s7aekt81.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfrbt-11-s7aekt81.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-zqakwz80.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:012665937f029b78d2a2e325cc86092e nmdc:wfrbt-11-zqakwz80.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9mhqsm53 INFO:root:omics_processing_id: nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb53962aabcda827b19e270a805dc0e1 nmdc:dobj-11-dynddq63 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb53962aabcda827b19e270a805dc0e1 nmdc:dobj-11-pt05r043 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gcs98d33 -INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hcrj6795.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-hcrj6795.1 +INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-reg6k386.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-reg6k386.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b889c06bb7e48bb4975ceff3a980952 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-hcrj6795.1/nmdc_wfrqc-11-hcrj6795.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b889c06bb7e48bb4975ceff3a980952 nmdc:dobj-11-31y9b853 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrqc-11-reg6k386.1/nmdc_wfrqc-11-reg6k386.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b889c06bb7e48bb4975ceff3a980952 nmdc:dobj-11-x5pdxm09 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hcrj6795.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfrqc-11-hcrj6795.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-reg6k386.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfrqc-11-reg6k386.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gcs98d33 -INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-twzgpk58.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-twzgpk58.1 +INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-2mft5y46.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fc371b6d4a8f79384bfd7027455d6fb -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-twzgpk58.1/nmdc_wfmgas-11-twzgpk58.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc371b6d4a8f79384bfd7027455d6fb nmdc:dobj-11-sq9y1990 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc371b6d4a8f79384bfd7027455d6fb nmdc:dobj-11-tj5fqy31 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twzgpk58.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-twzgpk58.1/nmdc_wfmgas-11-twzgpk58.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 nmdc:dobj-11-h4qcts56 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ffa3c2d89868a7f8f6ebe7056bed6a56 nmdc:dobj-11-0b9new18 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twzgpk58.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5f231e2f4737438a54110763946ae2a -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-twzgpk58.1/nmdc_wfmgas-11-twzgpk58.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5f231e2f4737438a54110763946ae2a nmdc:dobj-11-cmefsf56 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5f231e2f4737438a54110763946ae2a nmdc:dobj-11-wc4ggh64 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twzgpk58.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36aca4506415f2e7ecab46150cadc4fd -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-twzgpk58.1/nmdc_wfmgas-11-twzgpk58.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36aca4506415f2e7ecab46150cadc4fd nmdc:dobj-11-zqeefw35 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36aca4506415f2e7ecab46150cadc4fd nmdc:dobj-11-hchcyt74 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twzgpk58.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-twzgpk58.1/nmdc_wfmgas-11-twzgpk58.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 nmdc:dobj-11-xmrsxg49 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfmgas-11-2mft5y46.1/nmdc_wfmgas-11-2mft5y46.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fd5f6d44a3b65d5a3c547a86ce2b6e2 nmdc:dobj-11-6d4bc092 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twzgpk58.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfmgas-11-twzgpk58.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-2mft5y46.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfmgas-11-2mft5y46.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gcs98d33 -INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dq6t9248.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1 +INFO:root:New activity id created for nmdc:omprc-11-gcs98d33 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-sxdxt315.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 nmdc:dobj-11-j2yjtb31 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28dfaeedb8fd0c9c673f9ced0ed0d59 nmdc:dobj-11-ttzdsb25 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 nmdc:dobj-11-npv29t20 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60c0f6a38b12c2f4223489bd0b77a1e1 nmdc:dobj-11-s7fr4t74 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 nmdc:dobj-11-yzsdna22 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb2312c29c8ad72ea3dec88d3edf7e18 nmdc:dobj-11-px8zq476 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15235ba07643fdf9be634dec16cb40d9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15235ba07643fdf9be634dec16cb40d9 nmdc:dobj-11-ha5tzh35 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15235ba07643fdf9be634dec16cb40d9 nmdc:dobj-11-hepmdr68 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e23e02f296d5e9d401ee3aa5af6881e -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e23e02f296d5e9d401ee3aa5af6881e nmdc:dobj-11-jxz2mq15 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e23e02f296d5e9d401ee3aa5af6881e nmdc:dobj-11-gqbd5019 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15641306d09678eeb660afe9baa0dd52 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15641306d09678eeb660afe9baa0dd52 nmdc:dobj-11-a13w4r63 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15641306d09678eeb660afe9baa0dd52 nmdc:dobj-11-296r3g25 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e211c7908292e3c736ac51d366dafc0 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e211c7908292e3c736ac51d366dafc0 nmdc:dobj-11-krwgez76 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e211c7908292e3c736ac51d366dafc0 nmdc:dobj-11-xd59gd88 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:438858d832b7204080d117925306057c -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:438858d832b7204080d117925306057c nmdc:dobj-11-88grs398 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:438858d832b7204080d117925306057c nmdc:dobj-11-2g1xxv73 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15f09eb6e317e64163c3864a7d75b8f8 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-dq6t9248.1/nmdc_wfrbt-11-dq6t9248.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15f09eb6e317e64163c3864a7d75b8f8 nmdc:dobj-11-std16v51 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gcs98d33/nmdc:wfrbt-11-sxdxt315.1/nmdc_wfrbt-11-sxdxt315.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15f09eb6e317e64163c3864a7d75b8f8 nmdc:dobj-11-6b611d60 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gcs98d33 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dq6t9248.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfrbt-11-dq6t9248.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sxdxt315.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b29adb7db43cc9ef4b3c042eb3f8538b nmdc:wfrbt-11-sxdxt315.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gcs98d33 INFO:root:omics_processing_id: nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4df425ae66b46dcf353097aa64c8935 nmdc:dobj-11-r7tve555 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4df425ae66b46dcf353097aa64c8935 nmdc:dobj-11-g4enqd79 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-yzrza466 -INFO:root:New activity id created for nmdc:omprc-11-yzrza466 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-sak9rg97.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-sak9rg97.1 +INFO:root:New activity id created for nmdc:omprc-11-yzrza466 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qdkzn780.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-qdkzn780.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b7411005de416a82c68151462f846f7 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-sak9rg97.1/nmdc_wfrqc-11-sak9rg97.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b7411005de416a82c68151462f846f7 nmdc:dobj-11-7m9vdd37 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-qdkzn780.1/nmdc_wfrqc-11-qdkzn780.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b7411005de416a82c68151462f846f7 nmdc:dobj-11-0zybft91 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sak9rg97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qdkzn780.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:428534dbbc3d8201682fc3d8f5e818a6 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-sak9rg97.1/nmdc_wfrqc-11-sak9rg97.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428534dbbc3d8201682fc3d8f5e818a6 nmdc:dobj-11-vmk4xq44 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrqc-11-qdkzn780.1/nmdc_wfrqc-11-qdkzn780.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428534dbbc3d8201682fc3d8f5e818a6 nmdc:dobj-11-1y6hcj02 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-sak9rg97.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:07469a0fd749fc6d0294e945430740db nmdc:wfrqc-11-sak9rg97.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qdkzn780.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:07469a0fd749fc6d0294e945430740db nmdc:wfrqc-11-qdkzn780.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-yzrza466 -INFO:root:New activity id created for nmdc:omprc-11-yzrza466 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-756h1m83.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-756h1m83.1 +INFO:root:New activity id created for nmdc:omprc-11-yzrza466 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hsy3zm79.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ce7da98fd8f8e273ed40ff018bc19deb -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-756h1m83.1/nmdc_wfmgas-11-756h1m83.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce7da98fd8f8e273ed40ff018bc19deb nmdc:dobj-11-h6z4bm02 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1/nmdc_wfmgas-11-hsy3zm79.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce7da98fd8f8e273ed40ff018bc19deb nmdc:dobj-11-dxdkam41 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-756h1m83.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hsy3zm79.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3fc277745ea0af909bd7c89141beb89 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-756h1m83.1/nmdc_wfmgas-11-756h1m83.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b3fc277745ea0af909bd7c89141beb89 nmdc:dobj-11-2me06a94 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1/nmdc_wfmgas-11-hsy3zm79.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b3fc277745ea0af909bd7c89141beb89 nmdc:dobj-11-93ajzk24 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-756h1m83.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hsy3zm79.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80aa19f314fa95953264159534fecc73 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-756h1m83.1/nmdc_wfmgas-11-756h1m83.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80aa19f314fa95953264159534fecc73 nmdc:dobj-11-zar1vq32 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1/nmdc_wfmgas-11-hsy3zm79.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80aa19f314fa95953264159534fecc73 nmdc:dobj-11-jx19w830 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-756h1m83.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hsy3zm79.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c917868f2b1db5d25b821e3f0dda53e -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-756h1m83.1/nmdc_wfmgas-11-756h1m83.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c917868f2b1db5d25b821e3f0dda53e nmdc:dobj-11-nrjadq58 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1/nmdc_wfmgas-11-hsy3zm79.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c917868f2b1db5d25b821e3f0dda53e nmdc:dobj-11-4awxwv98 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-756h1m83.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hsy3zm79.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3162e231651b3f71e383e240c8f4be33 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-756h1m83.1/nmdc_wfmgas-11-756h1m83.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3162e231651b3f71e383e240c8f4be33 nmdc:dobj-11-76jtq695 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfmgas-11-hsy3zm79.1/nmdc_wfmgas-11-hsy3zm79.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3162e231651b3f71e383e240c8f4be33 nmdc:dobj-11-y5jybb61 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-756h1m83.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:07469a0fd749fc6d0294e945430740db nmdc:wfmgas-11-756h1m83.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hsy3zm79.1_pairedMapped_sorted.bam 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-3f4q7k69.1/nmdc_wfrbt-11-3f4q7k69.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:690a922236d7f0a3df8c4d3c6b2aca5b nmdc:dobj-11-dbnant17 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:690a922236d7f0a3df8c4d3c6b2aca5b nmdc:dobj-11-qn8kd717 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3f4q7k69.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e97d8a552f497bdea19fc444d8890b13 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-3f4q7k69.1/nmdc_wfrbt-11-3f4q7k69.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e97d8a552f497bdea19fc444d8890b13 nmdc:dobj-11-j67ej554 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e97d8a552f497bdea19fc444d8890b13 nmdc:dobj-11-hrbe5233 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3f4q7k69.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62e63bd91b0765d3858fc2791a14a4ea -INFO:root:New file path computed for GOTTCHA2 Krona Plot: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-3f4q7k69.1/nmdc_wfrbt-11-3f4q7k69.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2e34c2b30fcc9db48a259e2e194b22e nmdc:dobj-11-7rq5m645 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2e34c2b30fcc9db48a259e2e194b22e nmdc:dobj-11-1nrwm774 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3f4q7k69.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8f2eb681beb53a20ae6c4dd00819634 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-3f4q7k69.1/nmdc_wfrbt-11-3f4q7k69.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8f2eb681beb53a20ae6c4dd00819634 nmdc:dobj-11-4501yw10 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8f2eb681beb53a20ae6c4dd00819634 nmdc:dobj-11-fr43b176 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3f4q7k69.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73f0017a6c7866c263c64a437df23c7e -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-3f4q7k69.1/nmdc_wfrbt-11-3f4q7k69.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a36f26239b60ebb3ca62f050ee6e4739 nmdc:dobj-11-h9knsj58 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a36f26239b60ebb3ca62f050ee6e4739 nmdc:dobj-11-ffqarm86 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3f4q7k69.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b2debb07a334d9c9eedfaf3f12ff2433 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-3f4q7k69.1/nmdc_wfrbt-11-3f4q7k69.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2debb07a334d9c9eedfaf3f12ff2433 nmdc:dobj-11-6m49m395 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2debb07a334d9c9eedfaf3f12ff2433 nmdc:dobj-11-e9s7q744 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3f4q7k69.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:507af343316140c9e0e7ad26cfd8cf6b -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-3f4q7k69.1/nmdc_wfrbt-11-3f4q7k69.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:507af343316140c9e0e7ad26cfd8cf6b nmdc:dobj-11-1dh67696 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yzrza466/nmdc:wfrbt-11-bwc7em98.1/nmdc_wfrbt-11-bwc7em98.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:507af343316140c9e0e7ad26cfd8cf6b nmdc:dobj-11-kyqadt05 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-yzrza466 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3f4q7k69.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:07469a0fd749fc6d0294e945430740db nmdc:wfrbt-11-3f4q7k69.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bwc7em98.1_kraken2_krona.html 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nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfrqc-11-y7ngwv96.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fyq9hf83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfrqc-11-fyq9hf83.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-rf37rv10 -INFO:root:New activity id created for nmdc:omprc-11-rf37rv10 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-h6d8mg52.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-h6d8mg52.1 +INFO:root:New activity id created for nmdc:omprc-11-rf37rv10 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8ymqfa49.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c9551f1e148f31aea5270994a18d84d -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-h6d8mg52.1/nmdc_wfmgas-11-h6d8mg52.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c9551f1e148f31aea5270994a18d84d nmdc:dobj-11-km0fyg23 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c9551f1e148f31aea5270994a18d84d nmdc:dobj-11-5qvk7817 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h6d8mg52.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1663c6cf4ee95f6ef34537203d31b228 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-h6d8mg52.1/nmdc_wfmgas-11-h6d8mg52.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80fa4789cc2dc33b4fa4070b41a4ec40 nmdc:dobj-11-kmgw2k05 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80fa4789cc2dc33b4fa4070b41a4ec40 nmdc:dobj-11-9ze60c21 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h6d8mg52.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc58adbee49b0f26fd33bc079e27afd5 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-h6d8mg52.1/nmdc_wfmgas-11-h6d8mg52.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc58adbee49b0f26fd33bc079e27afd5 nmdc:dobj-11-gqzqpx88 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc58adbee49b0f26fd33bc079e27afd5 nmdc:dobj-11-dkg47y64 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h6d8mg52.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1460560b9cbc220b669761d855b9755 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-h6d8mg52.1/nmdc_wfmgas-11-h6d8mg52.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1460560b9cbc220b669761d855b9755 nmdc:dobj-11-293a1528 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfmgas-11-8ymqfa49.1/nmdc_wfmgas-11-8ymqfa49.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1460560b9cbc220b669761d855b9755 nmdc:dobj-11-67vwt060 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h6d8mg52.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfmgas-11-h6d8mg52.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8ymqfa49.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfmgas-11-8ymqfa49.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-rf37rv10 -INFO:root:New activity id created for nmdc:omprc-11-rf37rv10 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-njxv7p40.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1 +INFO:root:New activity id created for nmdc:omprc-11-rf37rv10 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1nxxdz06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:baed2100206fd23cf7a610c67694d54e -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baed2100206fd23cf7a610c67694d54e nmdc:dobj-11-7b0npv70 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baed2100206fd23cf7a610c67694d54e nmdc:dobj-11-xxq0qg94 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5045870e25c680ea8552596c86cd4a88 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5045870e25c680ea8552596c86cd4a88 nmdc:dobj-11-xnt4e664 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5045870e25c680ea8552596c86cd4a88 nmdc:dobj-11-p84tpc53 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2aa7848845cdedec9f768c7c62845869 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2aa7848845cdedec9f768c7c62845869 nmdc:dobj-11-ywztar84 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2aa7848845cdedec9f768c7c62845869 nmdc:dobj-11-5b5w3q60 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:210b8c6bace8020b6d2a0d9187dc05e6 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:210b8c6bace8020b6d2a0d9187dc05e6 nmdc:dobj-11-q7fck062 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:210b8c6bace8020b6d2a0d9187dc05e6 nmdc:dobj-11-jthvj859 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f17427c22ec617560cc33baaa635414 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f17427c22ec617560cc33baaa635414 nmdc:dobj-11-my22j353 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f17427c22ec617560cc33baaa635414 nmdc:dobj-11-9h4jva53 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e958a7799c53160c16084b704b89a8fe -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e958a7799c53160c16084b704b89a8fe nmdc:dobj-11-e4m9my50 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e958a7799c53160c16084b704b89a8fe nmdc:dobj-11-5pg70820 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 nmdc:dobj-11-57sjkj50 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62c93c6acc9f890f61f7ec5acd0aeb61 nmdc:dobj-11-py284b25 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51930ed3dc3e95f11b90f0ad0b502c3a -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51930ed3dc3e95f11b90f0ad0b502c3a nmdc:dobj-11-nqzwtb45 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51930ed3dc3e95f11b90f0ad0b502c3a nmdc:dobj-11-q4k3sv66 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:30e62c9d1efb5507560099fc9782adc5 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-njxv7p40.1/nmdc_wfrbt-11-njxv7p40.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:30e62c9d1efb5507560099fc9782adc5 nmdc:dobj-11-y6qpxh57 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rf37rv10/nmdc:wfrbt-11-1nxxdz06.1/nmdc_wfrbt-11-1nxxdz06.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:30e62c9d1efb5507560099fc9782adc5 nmdc:dobj-11-a37s3a91 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-rf37rv10 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-njxv7p40.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6c7fe677125f9e092453cad2fa19c6e9 nmdc:wfrbt-11-njxv7p40.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1nxxdz06.1_kraken2_krona.html 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Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-zq3rr436.1/nmdc_wfmgas-11-zq3rr436.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faa801494bd5c59f2c74c8347b3919a1 nmdc:dobj-11-6va70p55 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faa801494bd5c59f2c74c8347b3919a1 nmdc:dobj-11-wxkqh941 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zq3rr436.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82e36fe1492818c0ec66d1cd6b545437 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-zq3rr436.1/nmdc_wfmgas-11-zq3rr436.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82e36fe1492818c0ec66d1cd6b545437 nmdc:dobj-11-t3ez7k55 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82e36fe1492818c0ec66d1cd6b545437 nmdc:dobj-11-d8fd9n40 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zq3rr436.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f81bb50fba9c05745cfd298cfbe3481b -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-zq3rr436.1/nmdc_wfmgas-11-zq3rr436.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f81bb50fba9c05745cfd298cfbe3481b nmdc:dobj-11-yhjdne78 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f81bb50fba9c05745cfd298cfbe3481b nmdc:dobj-11-rcvybv46 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zq3rr436.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f732fd9bb21687e4353521ca123593f0 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-zq3rr436.1/nmdc_wfmgas-11-zq3rr436.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f732fd9bb21687e4353521ca123593f0 nmdc:dobj-11-44a34011 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f732fd9bb21687e4353521ca123593f0 nmdc:dobj-11-3q901w08 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zq3rr436.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b34b35041359938246655f6e851699dc -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-zq3rr436.1/nmdc_wfmgas-11-zq3rr436.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b34b35041359938246655f6e851699dc nmdc:dobj-11-pqahsh98 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfmgas-11-twvcr452.1/nmdc_wfmgas-11-twvcr452.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b34b35041359938246655f6e851699dc nmdc:dobj-11-bfhkv283 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zq3rr436.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfmgas-11-zq3rr436.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-twvcr452.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfmgas-11-twvcr452.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ne1fzr77 -INFO:root:New activity id created for nmdc:omprc-11-ne1fzr77 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8kgdk521.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1 +INFO:root:New activity id created for nmdc:omprc-11-ne1fzr77 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-9bcdc448.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02a87bccf020ebf38fa55771da1a39b8 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02a87bccf020ebf38fa55771da1a39b8 nmdc:dobj-11-nb9vr236 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02a87bccf020ebf38fa55771da1a39b8 nmdc:dobj-11-hqb2as88 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 nmdc:dobj-11-kc06bz09 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d00ae26ba1c52454a7013ad8fe13dfe4 nmdc:dobj-11-dfn4fq47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e3ff94d67160a4b9810d3c0716b676f -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e3ff94d67160a4b9810d3c0716b676f nmdc:dobj-11-3yvn0542 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e3ff94d67160a4b9810d3c0716b676f nmdc:dobj-11-144tn228 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:623812cb5aebbe8b96914b22f055faa9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:623812cb5aebbe8b96914b22f055faa9 nmdc:dobj-11-qtyfvq80 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:623812cb5aebbe8b96914b22f055faa9 nmdc:dobj-11-1qyrvb35 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 nmdc:dobj-11-0ktbqh29 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a31eb3ef4ebb8e3ba24a6bd258335a35 nmdc:dobj-11-f6sj8947 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2221531a2bbf6cfb3ea8eb0d513ba6d6 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2221531a2bbf6cfb3ea8eb0d513ba6d6 nmdc:dobj-11-t7w15125 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2221531a2bbf6cfb3ea8eb0d513ba6d6 nmdc:dobj-11-k0s0s326 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f37c12739b50edd11198b9c0fbeed6cb -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f37c12739b50edd11198b9c0fbeed6cb nmdc:dobj-11-sr9k2136 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f37c12739b50edd11198b9c0fbeed6cb nmdc:dobj-11-0qzh9s90 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1e6d74ec82dca134de4dd3f62a4042eb -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e6d74ec82dca134de4dd3f62a4042eb nmdc:dobj-11-rmkxg397 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1e6d74ec82dca134de4dd3f62a4042eb nmdc:dobj-11-5y0e5526 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f7adb75056ddd0b4e63066d322e02a2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-8kgdk521.1/nmdc_wfrbt-11-8kgdk521.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f7adb75056ddd0b4e63066d322e02a2 nmdc:dobj-11-h7pvym59 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ne1fzr77/nmdc:wfrbt-11-9bcdc448.1/nmdc_wfrbt-11-9bcdc448.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f7adb75056ddd0b4e63066d322e02a2 nmdc:dobj-11-y6d1w544 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ne1fzr77 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8kgdk521.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfrbt-11-8kgdk521.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9bcdc448.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:132d82e22c62fdf4c177b4470926a683 nmdc:wfrbt-11-9bcdc448.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ne1fzr77 INFO:root:omics_processing_id: nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8224d0f7d3ceb191111f6d49e415afc8 nmdc:dobj-11-qe7vs766 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8224d0f7d3ceb191111f6d49e415afc8 nmdc:dobj-11-b5dygq34 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m8nz8d35 -INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mvf49s22.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-mvf49s22.1 +INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7rv9x998.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-7rv9x998.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c814bd445b03eaebf8e184d7fd15b373 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-mvf49s22.1/nmdc_wfrqc-11-mvf49s22.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c814bd445b03eaebf8e184d7fd15b373 nmdc:dobj-11-twhpdn61 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-7rv9x998.1/nmdc_wfrqc-11-7rv9x998.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c814bd445b03eaebf8e184d7fd15b373 nmdc:dobj-11-1c2rv015 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mvf49s22.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7rv9x998.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fcfd647558a4ef62478c90adde51806 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-mvf49s22.1/nmdc_wfrqc-11-mvf49s22.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fcfd647558a4ef62478c90adde51806 nmdc:dobj-11-v88n4r85 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrqc-11-7rv9x998.1/nmdc_wfrqc-11-7rv9x998.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fcfd647558a4ef62478c90adde51806 nmdc:dobj-11-apbm1d85 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mvf49s22.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfrqc-11-mvf49s22.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7rv9x998.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfrqc-11-7rv9x998.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m8nz8d35 -INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-jx1en789.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-jx1en789.1 +INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-s601ad46.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c86720388b57a8560fd9175da9b85c8b -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-jx1en789.1/nmdc_wfmgas-11-jx1en789.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c86720388b57a8560fd9175da9b85c8b nmdc:dobj-11-3zm6nh24 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c86720388b57a8560fd9175da9b85c8b nmdc:dobj-11-ga8b9q59 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jx1en789.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd28211d3f934b43916c5e73819bc8b6 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-jx1en789.1/nmdc_wfmgas-11-jx1en789.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd28211d3f934b43916c5e73819bc8b6 nmdc:dobj-11-q0dn4838 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd28211d3f934b43916c5e73819bc8b6 nmdc:dobj-11-h88shm81 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jx1en789.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:347aa6885ede562646eb8d9b2177999b -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-jx1en789.1/nmdc_wfmgas-11-jx1en789.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:347aa6885ede562646eb8d9b2177999b nmdc:dobj-11-3p86xc46 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:347aa6885ede562646eb8d9b2177999b nmdc:dobj-11-641ny236 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jx1en789.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:041cd4f4fc2739f7bff0df87bf82135c -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-jx1en789.1/nmdc_wfmgas-11-jx1en789.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:041cd4f4fc2739f7bff0df87bf82135c nmdc:dobj-11-17346177 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:041cd4f4fc2739f7bff0df87bf82135c nmdc:dobj-11-gz000d82 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jx1en789.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ba3d490fab94cd5694233e6e3f42c718 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-jx1en789.1/nmdc_wfmgas-11-jx1en789.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba3d490fab94cd5694233e6e3f42c718 nmdc:dobj-11-txyzrf92 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfmgas-11-s601ad46.1/nmdc_wfmgas-11-s601ad46.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba3d490fab94cd5694233e6e3f42c718 nmdc:dobj-11-7qm2qh66 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-jx1en789.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfmgas-11-jx1en789.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s601ad46.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfmgas-11-s601ad46.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m8nz8d35 -INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-11haw964.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1 +INFO:root:New activity id created for nmdc:omprc-11-m8nz8d35 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-z0yz6j35.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b6185a5e796df1bcfb6096ad89a7aac -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b6185a5e796df1bcfb6096ad89a7aac nmdc:dobj-11-6h172p42 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b6185a5e796df1bcfb6096ad89a7aac nmdc:dobj-11-m1py8998 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a1175e66c5db74cf3dfe12efdaf692c5 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1175e66c5db74cf3dfe12efdaf692c5 nmdc:dobj-11-51qsdp62 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a1175e66c5db74cf3dfe12efdaf692c5 nmdc:dobj-11-t67j3m73 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:76786ed3956bbfbdefe27f0b6dd3b41a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:76786ed3956bbfbdefe27f0b6dd3b41a nmdc:dobj-11-ja1aeh72 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:76786ed3956bbfbdefe27f0b6dd3b41a nmdc:dobj-11-qas8g417 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3d76ff87998c13818880d0316b63187f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d76ff87998c13818880d0316b63187f nmdc:dobj-11-hygsnq15 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3d76ff87998c13818880d0316b63187f nmdc:dobj-11-566mnf87 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d1250a731e6492e6178e5b20a7b8a2a -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d1250a731e6492e6178e5b20a7b8a2a nmdc:dobj-11-bavxm256 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d1250a731e6492e6178e5b20a7b8a2a nmdc:dobj-11-8njwvy21 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e2ace15f115399d01070d31b2cb3275 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e2ace15f115399d01070d31b2cb3275 nmdc:dobj-11-sc7ndx38 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e2ace15f115399d01070d31b2cb3275 nmdc:dobj-11-vdjn5317 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ff551f313326d2d99f41215faccc3b4 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ff551f313326d2d99f41215faccc3b4 nmdc:dobj-11-yr0xq021 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ff551f313326d2d99f41215faccc3b4 nmdc:dobj-11-gvg6kw20 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd8b08b0c9c805f39331087692e6be41 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd8b08b0c9c805f39331087692e6be41 nmdc:dobj-11-0c8bsr37 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd8b08b0c9c805f39331087692e6be41 nmdc:dobj-11-78ys4189 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-11haw964.1/nmdc_wfrbt-11-11haw964.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 nmdc:dobj-11-ypgsp598 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m8nz8d35/nmdc:wfrbt-11-z0yz6j35.1/nmdc_wfrbt-11-z0yz6j35.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97b738ff3d8c5cf9b6e9e7557bab4873 nmdc:dobj-11-35742v65 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m8nz8d35 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-11haw964.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfrbt-11-11haw964.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-z0yz6j35.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:366b95f807137c01443b57d6432faf09 nmdc:wfrbt-11-z0yz6j35.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m8nz8d35 INFO:root:omics_processing_id: nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f57dcee7abd6613a46bed9e6d3bc61b nmdc:dobj-11-3hzqjg56 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f57dcee7abd6613a46bed9e6d3bc61b nmdc:dobj-11-phf3rh27 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-3kdzgf81 -INFO:root:New activity id created for nmdc:omprc-11-3kdzgf81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qb7epg62.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrqc-11-qb7epg62.1 +INFO:root:New activity id created for nmdc:omprc-11-3kdzgf81 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g3p3z194.1 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+INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g3p3z194.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcce93bb0809075db70107e52527904b -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrqc-11-qb7epg62.1/nmdc_wfrqc-11-qb7epg62.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcce93bb0809075db70107e52527904b nmdc:dobj-11-shqbh583 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrqc-11-g3p3z194.1/nmdc_wfrqc-11-g3p3z194.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcce93bb0809075db70107e52527904b nmdc:dobj-11-2n6aqk51 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qb7epg62.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c3b24917b6908e3976cea38aaeab818a nmdc:wfrqc-11-qb7epg62.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g3p3z194.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c3b24917b6908e3976cea38aaeab818a nmdc:wfrqc-11-g3p3z194.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-3kdzgf81 -INFO:root:New activity id created for nmdc:omprc-11-3kdzgf81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-h5nw1880.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-h5nw1880.1 +INFO:root:New activity id created for nmdc:omprc-11-3kdzgf81 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-y74g1396.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-y74g1396.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:05d0bc222b1bb08092c97aa1694a9827 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-h5nw1880.1/nmdc_wfmgas-11-h5nw1880.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:05d0bc222b1bb08092c97aa1694a9827 nmdc:dobj-11-8nm28726 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-y74g1396.1/nmdc_wfmgas-11-y74g1396.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:05d0bc222b1bb08092c97aa1694a9827 nmdc:dobj-11-rnkr8q45 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h5nw1880.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y74g1396.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a44c67df49dc0759a43055569666b1d -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-h5nw1880.1/nmdc_wfmgas-11-h5nw1880.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a44c67df49dc0759a43055569666b1d nmdc:dobj-11-4tvbke83 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-y74g1396.1/nmdc_wfmgas-11-y74g1396.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a44c67df49dc0759a43055569666b1d nmdc:dobj-11-761vap21 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h5nw1880.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y74g1396.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ba4600ecc237f19486cd331e2ab392a3 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-h5nw1880.1/nmdc_wfmgas-11-h5nw1880.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba4600ecc237f19486cd331e2ab392a3 nmdc:dobj-11-n6es5e83 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-y74g1396.1/nmdc_wfmgas-11-y74g1396.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba4600ecc237f19486cd331e2ab392a3 nmdc:dobj-11-1m613b70 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h5nw1880.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y74g1396.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f64a242f72ed6f8eacf286221775cce3 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-h5nw1880.1/nmdc_wfmgas-11-h5nw1880.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f64a242f72ed6f8eacf286221775cce3 nmdc:dobj-11-ywpn5766 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-y74g1396.1/nmdc_wfmgas-11-y74g1396.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f64a242f72ed6f8eacf286221775cce3 nmdc:dobj-11-f53t7m69 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h5nw1880.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y74g1396.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a480d869895931d6403768b88344feba -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-h5nw1880.1/nmdc_wfmgas-11-h5nw1880.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a480d869895931d6403768b88344feba nmdc:dobj-11-r9ht4c52 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfmgas-11-y74g1396.1/nmdc_wfmgas-11-y74g1396.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a480d869895931d6403768b88344feba nmdc:dobj-11-6t5t7y06 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h5nw1880.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c3b24917b6908e3976cea38aaeab818a nmdc:wfmgas-11-h5nw1880.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y74g1396.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:c3b24917b6908e3976cea38aaeab818a nmdc:wfmgas-11-y74g1396.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-3kdzgf81 -INFO:root:New activity id created for nmdc:omprc-11-3kdzgf81 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-3qva3t47.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1 +INFO:root:New activity id created for nmdc:omprc-11-3kdzgf81 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-t0vj0t76.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1271e977d7a7a2ddb6e8b6938bc258c5 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1271e977d7a7a2ddb6e8b6938bc258c5 nmdc:dobj-11-1vc9fq15 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1271e977d7a7a2ddb6e8b6938bc258c5 nmdc:dobj-11-k7x03879 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dccd678c9dd9a2428504d7545a50103a -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dccd678c9dd9a2428504d7545a50103a nmdc:dobj-11-bgvty159 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dccd678c9dd9a2428504d7545a50103a nmdc:dobj-11-b8eyke64 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f813e000a7d850611c67693832ce01fd -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f813e000a7d850611c67693832ce01fd nmdc:dobj-11-rqgdxn07 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f813e000a7d850611c67693832ce01fd nmdc:dobj-11-mh8k0b46 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:946779b32f4331010418fc96cff2f925 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:946779b32f4331010418fc96cff2f925 nmdc:dobj-11-dnep0t16 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:946779b32f4331010418fc96cff2f925 nmdc:dobj-11-8pna7920 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26b6c91419fcc609e866b73ff56b4b3b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26b6c91419fcc609e866b73ff56b4b3b nmdc:dobj-11-647f1824 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26b6c91419fcc609e866b73ff56b4b3b nmdc:dobj-11-4mcbx403 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:674982933948d744a2ea5cb87c036a0b -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:674982933948d744a2ea5cb87c036a0b nmdc:dobj-11-1kaxae34 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:674982933948d744a2ea5cb87c036a0b nmdc:dobj-11-cpavp909 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48c49d2858dc9a27b6a70536cfabbf5c -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48c49d2858dc9a27b6a70536cfabbf5c nmdc:dobj-11-70d8tz61 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48c49d2858dc9a27b6a70536cfabbf5c nmdc:dobj-11-z548vv30 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab514bf7bf2e5dfb097c4e51fb6acb00 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab514bf7bf2e5dfb097c4e51fb6acb00 nmdc:dobj-11-1e7xz025 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab514bf7bf2e5dfb097c4e51fb6acb00 nmdc:dobj-11-0535k349 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:339c19187baa0181fad7ef791a234e81 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-3qva3t47.1/nmdc_wfrbt-11-3qva3t47.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:339c19187baa0181fad7ef791a234e81 nmdc:dobj-11-ahz64x83 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3kdzgf81/nmdc:wfrbt-11-t0vj0t76.1/nmdc_wfrbt-11-t0vj0t76.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:339c19187baa0181fad7ef791a234e81 nmdc:dobj-11-hd29f862 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3kdzgf81 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3qva3t47.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3b24917b6908e3976cea38aaeab818a nmdc:wfrbt-11-3qva3t47.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t0vj0t76.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c3b24917b6908e3976cea38aaeab818a nmdc:wfrbt-11-t0vj0t76.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-3kdzgf81 INFO:root:omics_processing_id: nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf4c63cdb2f8d4b17dc591ac83c042e0 nmdc:dobj-11-5st27862 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf4c63cdb2f8d4b17dc591ac83c042e0 nmdc:dobj-11-8xy5nr92 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-k95tgy11 -INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qctt3707.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-qctt3707.1 +INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rmh11f12.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-rmh11f12.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:646d88c14ffcc7d5724b138139ef0740 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-qctt3707.1/nmdc_wfrqc-11-qctt3707.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:646d88c14ffcc7d5724b138139ef0740 nmdc:dobj-11-wdtnvc62 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-rmh11f12.1/nmdc_wfrqc-11-rmh11f12.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:646d88c14ffcc7d5724b138139ef0740 nmdc:dobj-11-04q0jq53 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qctt3707.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rmh11f12.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4737643124cea969498985d8cb0f7148 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-qctt3707.1/nmdc_wfrqc-11-qctt3707.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4737643124cea969498985d8cb0f7148 nmdc:dobj-11-et6r1031 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrqc-11-rmh11f12.1/nmdc_wfrqc-11-rmh11f12.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4737643124cea969498985d8cb0f7148 nmdc:dobj-11-0xqgt095 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qctt3707.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfrqc-11-qctt3707.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rmh11f12.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfrqc-11-rmh11f12.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-k95tgy11 -INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-k0v9q817.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-k0v9q817.1 +INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ddyadn86.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2876f90fb777b0870060aeab0d8d6805 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-k0v9q817.1/nmdc_wfmgas-11-k0v9q817.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2876f90fb777b0870060aeab0d8d6805 nmdc:dobj-11-2n4q5d68 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2876f90fb777b0870060aeab0d8d6805 nmdc:dobj-11-p9ed4t02 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k0v9q817.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65f0a55ac61f5d41f2cc4c8fd7119400 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-k0v9q817.1/nmdc_wfmgas-11-k0v9q817.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65f0a55ac61f5d41f2cc4c8fd7119400 nmdc:dobj-11-qb08ry34 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65f0a55ac61f5d41f2cc4c8fd7119400 nmdc:dobj-11-0d5y8b02 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k0v9q817.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eacb484bf0df0ac443d61bb462348714 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-k0v9q817.1/nmdc_wfmgas-11-k0v9q817.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eacb484bf0df0ac443d61bb462348714 nmdc:dobj-11-pz334710 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eacb484bf0df0ac443d61bb462348714 nmdc:dobj-11-sfvkca86 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k0v9q817.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f5d1924e8ac016a3cc58bcf5447f319 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-k0v9q817.1/nmdc_wfmgas-11-k0v9q817.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f5d1924e8ac016a3cc58bcf5447f319 nmdc:dobj-11-a6zgg215 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f5d1924e8ac016a3cc58bcf5447f319 nmdc:dobj-11-98525g08 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k0v9q817.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6735368c34cd89f88883ba8be1435281 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-k0v9q817.1/nmdc_wfmgas-11-k0v9q817.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6735368c34cd89f88883ba8be1435281 nmdc:dobj-11-dvad6z74 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfmgas-11-ddyadn86.1/nmdc_wfmgas-11-ddyadn86.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6735368c34cd89f88883ba8be1435281 nmdc:dobj-11-rb2aqs32 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k0v9q817.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfmgas-11-k0v9q817.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ddyadn86.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfmgas-11-ddyadn86.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-k95tgy11 -INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ccs7m966.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1 +INFO:root:New activity id created for nmdc:omprc-11-k95tgy11 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-m5b2aw33.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a38e1214509fb756019f5aa6efa06cb -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a38e1214509fb756019f5aa6efa06cb nmdc:dobj-11-gmvnek78 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a38e1214509fb756019f5aa6efa06cb nmdc:dobj-11-fr1vgk51 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b862fdc0569c76739f06e4dedb1f96ae -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b862fdc0569c76739f06e4dedb1f96ae nmdc:dobj-11-kqpns034 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b862fdc0569c76739f06e4dedb1f96ae nmdc:dobj-11-ydndd249 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:474fc04537d441bf10248448601b98c5 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:474fc04537d441bf10248448601b98c5 nmdc:dobj-11-75qq1865 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:474fc04537d441bf10248448601b98c5 nmdc:dobj-11-jywak935 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:826950b35dda3575c9b22162aca0456a -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:826950b35dda3575c9b22162aca0456a nmdc:dobj-11-0c7prf70 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:826950b35dda3575c9b22162aca0456a nmdc:dobj-11-pbr6rq20 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2732870d58f60e64a60c05f499e8ea32 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2732870d58f60e64a60c05f499e8ea32 nmdc:dobj-11-2xcq8g59 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2732870d58f60e64a60c05f499e8ea32 nmdc:dobj-11-3wceqx62 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bdd42a6d86423fea126edeba1482438 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bdd42a6d86423fea126edeba1482438 nmdc:dobj-11-jedzja84 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bdd42a6d86423fea126edeba1482438 nmdc:dobj-11-b4m4nc24 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:deb626bf8459ffb29623c12aab935b9b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:deb626bf8459ffb29623c12aab935b9b nmdc:dobj-11-7by2ka63 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:deb626bf8459ffb29623c12aab935b9b nmdc:dobj-11-4b1jkx98 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 nmdc:dobj-11-q1xjnd14 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b7f872c6c843b8e8a69f5e272dc1f41 nmdc:dobj-11-dmfm0684 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de681291a4806cada5a435b0a268bbc5 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-ccs7m966.1/nmdc_wfrbt-11-ccs7m966.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de681291a4806cada5a435b0a268bbc5 nmdc:dobj-11-y8h1gy40 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-k95tgy11/nmdc:wfrbt-11-m5b2aw33.1/nmdc_wfrbt-11-m5b2aw33.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de681291a4806cada5a435b0a268bbc5 nmdc:dobj-11-7896dh54 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-k95tgy11 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ccs7m966.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:65077a8ef5daf8f61d7ca440f788381e nmdc:wfrbt-11-ccs7m966.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-m5b2aw33.1_kraken2_krona.html 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path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-y4544y33.1/nmdc_wfrbt-11-y4544y33.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:901f4ef845f6b1a8b2f7c86702e3cae0 nmdc:dobj-11-3661sf53 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:901f4ef845f6b1a8b2f7c86702e3cae0 nmdc:dobj-11-jbfppg41 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4544y33.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0674278738def7a9236bd7835dec3560 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-y4544y33.1/nmdc_wfrbt-11-y4544y33.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0674278738def7a9236bd7835dec3560 nmdc:dobj-11-js8e7n95 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0674278738def7a9236bd7835dec3560 nmdc:dobj-11-hv96v419 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4544y33.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10d3cf3416ffabbfc57ef646dfef5794 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-y4544y33.1/nmdc_wfrbt-11-y4544y33.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10d3cf3416ffabbfc57ef646dfef5794 nmdc:dobj-11-w29bc207 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10d3cf3416ffabbfc57ef646dfef5794 nmdc:dobj-11-7qqewy93 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4544y33.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ba6b3b97535f8a5aff0eef041442f32 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-y4544y33.1/nmdc_wfrbt-11-y4544y33.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ba6b3b97535f8a5aff0eef041442f32 nmdc:dobj-11-w7qjgc95 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f4eray08/nmdc:wfrbt-11-fxm2hg03.1/nmdc_wfrbt-11-fxm2hg03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ba6b3b97535f8a5aff0eef041442f32 nmdc:dobj-11-wmn59s67 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-f4eray08 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4544y33.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:62d798b0bc7f186c279aed20d9dfe0d0 nmdc:wfrbt-11-y4544y33.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fxm2hg03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:62d798b0bc7f186c279aed20d9dfe0d0 nmdc:wfrbt-11-fxm2hg03.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-f4eray08 INFO:root:omics_processing_id: nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49b6ab7f5a43b171f4b6de616624fe02 nmdc:dobj-11-k88mza74 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49b6ab7f5a43b171f4b6de616624fe02 nmdc:dobj-11-v1efvt69 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-ynq39f38 -INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vtsksf81.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrqc-11-vtsksf81.1 +INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-dqpecp83.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrqc-11-dqpecp83.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a5d10c8d78ee52ee1b0932d568f1995 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrqc-11-vtsksf81.1/nmdc_wfrqc-11-vtsksf81.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a5d10c8d78ee52ee1b0932d568f1995 nmdc:dobj-11-caekww37 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrqc-11-dqpecp83.1/nmdc_wfrqc-11-dqpecp83.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a5d10c8d78ee52ee1b0932d568f1995 nmdc:dobj-11-n75gdg69 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vtsksf81.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dqpecp83.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9802759737e5cfe94f21c7bec3a97e54 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrqc-11-vtsksf81.1/nmdc_wfrqc-11-vtsksf81.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9802759737e5cfe94f21c7bec3a97e54 nmdc:dobj-11-hfy89651 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrqc-11-dqpecp83.1/nmdc_wfrqc-11-dqpecp83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9802759737e5cfe94f21c7bec3a97e54 nmdc:dobj-11-1q0gst52 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vtsksf81.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfrqc-11-vtsksf81.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-dqpecp83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfrqc-11-dqpecp83.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-ynq39f38 -INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-mxh5zv45.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-mxh5zv45.1 +INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-y9p92g91.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2136555c4e8c6cf99f7de4bd3cda9fd4 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-mxh5zv45.1/nmdc_wfmgas-11-mxh5zv45.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2136555c4e8c6cf99f7de4bd3cda9fd4 nmdc:dobj-11-6s1mvm54 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2136555c4e8c6cf99f7de4bd3cda9fd4 nmdc:dobj-11-jq6hkz04 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mxh5zv45.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fb0980ccfee06658b6d808ec232245e -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-mxh5zv45.1/nmdc_wfmgas-11-mxh5zv45.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fb0980ccfee06658b6d808ec232245e nmdc:dobj-11-vzgrss23 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fb0980ccfee06658b6d808ec232245e nmdc:dobj-11-amyw3z90 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mxh5zv45.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a179c7b8c2d4faa8774aa9d55c29cd84 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-mxh5zv45.1/nmdc_wfmgas-11-mxh5zv45.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a179c7b8c2d4faa8774aa9d55c29cd84 nmdc:dobj-11-27jy0v89 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a179c7b8c2d4faa8774aa9d55c29cd84 nmdc:dobj-11-ppgtg673 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mxh5zv45.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aef2f1ad1fb1a52a929fe7bb532729df -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-mxh5zv45.1/nmdc_wfmgas-11-mxh5zv45.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aef2f1ad1fb1a52a929fe7bb532729df nmdc:dobj-11-v0zw0308 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aef2f1ad1fb1a52a929fe7bb532729df nmdc:dobj-11-t1v4js19 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mxh5zv45.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c9812d71dda10c62034bfbda53bd31c -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-mxh5zv45.1/nmdc_wfmgas-11-mxh5zv45.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c9812d71dda10c62034bfbda53bd31c nmdc:dobj-11-4mq92j76 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfmgas-11-y9p92g91.1/nmdc_wfmgas-11-y9p92g91.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c9812d71dda10c62034bfbda53bd31c nmdc:dobj-11-rsetd423 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mxh5zv45.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfmgas-11-mxh5zv45.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y9p92g91.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfmgas-11-y9p92g91.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-ynq39f38 -INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1h67sw93.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1 +INFO:root:New activity id created for nmdc:omprc-11-ynq39f38 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-kt6ha622.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f068fba7ce9a1b7af877a0a49d5948a2 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f068fba7ce9a1b7af877a0a49d5948a2 nmdc:dobj-11-2w6ggk13 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f068fba7ce9a1b7af877a0a49d5948a2 nmdc:dobj-11-g2vpnh59 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32c79918dafb7609623d1f23dc7b4bc5 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32c79918dafb7609623d1f23dc7b4bc5 nmdc:dobj-11-xsged177 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32c79918dafb7609623d1f23dc7b4bc5 nmdc:dobj-11-gwa5qx35 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b64574b49b04ae5e4e4e5b43d7d274b -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b64574b49b04ae5e4e4e5b43d7d274b nmdc:dobj-11-fsg5m394 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b64574b49b04ae5e4e4e5b43d7d274b nmdc:dobj-11-aaswq210 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:00fafd896809d58767b902d1c5915db8 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00fafd896809d58767b902d1c5915db8 nmdc:dobj-11-p6r58616 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00fafd896809d58767b902d1c5915db8 nmdc:dobj-11-qs8vs428 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a76377ff252e930286d7f4a7e13103b4 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a76377ff252e930286d7f4a7e13103b4 nmdc:dobj-11-0hddkk96 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a76377ff252e930286d7f4a7e13103b4 nmdc:dobj-11-qq1znb80 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71336e0a19a89c8826ee4fce1620ede2 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71336e0a19a89c8826ee4fce1620ede2 nmdc:dobj-11-nrnjcj05 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71336e0a19a89c8826ee4fce1620ede2 nmdc:dobj-11-mm2bc233 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:981fa88038f8c9863c4c07a68491b9d8 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:981fa88038f8c9863c4c07a68491b9d8 nmdc:dobj-11-w57ftt12 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:981fa88038f8c9863c4c07a68491b9d8 nmdc:dobj-11-zv06fz09 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e3820736b404c3ae54aefcd887eaaad -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e3820736b404c3ae54aefcd887eaaad nmdc:dobj-11-8vqz0148 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e3820736b404c3ae54aefcd887eaaad nmdc:dobj-11-g7gj0732 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd406700f630317282ce5bca93db8e01 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-1h67sw93.1/nmdc_wfrbt-11-1h67sw93.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd406700f630317282ce5bca93db8e01 nmdc:dobj-11-0bgk3308 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ynq39f38/nmdc:wfrbt-11-kt6ha622.1/nmdc_wfrbt-11-kt6ha622.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd406700f630317282ce5bca93db8e01 nmdc:dobj-11-nz20xy04 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-ynq39f38 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1h67sw93.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfrbt-11-1h67sw93.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kt6ha622.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a6cc148c5ad2c97018dd77beff58ffe3 nmdc:wfrbt-11-kt6ha622.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ynq39f38 INFO:root:omics_processing_id: nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:452104acaf8a6d065f9a8fdbd64ee882 nmdc:dobj-11-ekce1n98 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:452104acaf8a6d065f9a8fdbd64ee882 nmdc:dobj-11-wnpaaz52 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-r2n4hp61 -INFO:root:New activity id created for nmdc:omprc-11-r2n4hp61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9r8c6r82.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrqc-11-9r8c6r82.1 +INFO:root:New activity id created for nmdc:omprc-11-r2n4hp61 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hzjzhr96.1 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nmdc:496e20a5a725b9fe78cf583f35ed221f nmdc:wfrqc-11-9r8c6r82.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-hzjzhr96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:496e20a5a725b9fe78cf583f35ed221f nmdc:wfrqc-11-hzjzhr96.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-r2n4hp61 -INFO:root:New activity id created for nmdc:omprc-11-r2n4hp61 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-9gp7k131.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-9gp7k131.1 +INFO:root:New activity id created for nmdc:omprc-11-r2n4hp61 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ztszje97.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-ztszje97.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c127fb0bfbbb33cecda3574d1506dc1a -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-9gp7k131.1/nmdc_wfmgas-11-9gp7k131.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c127fb0bfbbb33cecda3574d1506dc1a nmdc:dobj-11-na0bdb85 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-ztszje97.1/nmdc_wfmgas-11-ztszje97.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c127fb0bfbbb33cecda3574d1506dc1a nmdc:dobj-11-syg17y36 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9gp7k131.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ztszje97.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:81d6d8b2bc024d33b02c2bbfaf893e43 -INFO:root:New file path computed for Assembly Scaffolds: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-9gp7k131.1/nmdc_wfmgas-11-9gp7k131.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ad64c80eb358337a7eab45d7afbf150 nmdc:dobj-11-2ppanh28 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-ztszje97.1/nmdc_wfmgas-11-ztszje97.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ad64c80eb358337a7eab45d7afbf150 nmdc:dobj-11-8rqxe734 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9gp7k131.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ztszje97.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36bbbe90278c8b6e8004bd4930e8b27d -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-9gp7k131.1/nmdc_wfmgas-11-9gp7k131.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36bbbe90278c8b6e8004bd4930e8b27d nmdc:dobj-11-qax4v128 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-ztszje97.1/nmdc_wfmgas-11-ztszje97.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36bbbe90278c8b6e8004bd4930e8b27d nmdc:dobj-11-hvckg986 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9gp7k131.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ztszje97.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1eb1dda732d8ea0bfc97e1c0dc1e3dab -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-9gp7k131.1/nmdc_wfmgas-11-9gp7k131.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1eb1dda732d8ea0bfc97e1c0dc1e3dab nmdc:dobj-11-rqqy0d51 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfmgas-11-ztszje97.1/nmdc_wfmgas-11-ztszje97.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1eb1dda732d8ea0bfc97e1c0dc1e3dab nmdc:dobj-11-zy4k0956 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9gp7k131.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:496e20a5a725b9fe78cf583f35ed221f nmdc:wfmgas-11-9gp7k131.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ztszje97.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:496e20a5a725b9fe78cf583f35ed221f nmdc:wfmgas-11-ztszje97.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-r2n4hp61 -INFO:root:New activity id created for nmdc:omprc-11-r2n4hp61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-y4xgg069.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1 +INFO:root:New activity id created for nmdc:omprc-11-r2n4hp61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-wjkzqv59.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1de94e79e1c2712b2de6a06043f3c6c -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1de94e79e1c2712b2de6a06043f3c6c nmdc:dobj-11-ww2n2y66 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1de94e79e1c2712b2de6a06043f3c6c nmdc:dobj-11-qcv0qa16 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fdf29ba4cc43ca7736c46067a9f3351 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fdf29ba4cc43ca7736c46067a9f3351 nmdc:dobj-11-p5jx6f61 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fdf29ba4cc43ca7736c46067a9f3351 nmdc:dobj-11-z92vev57 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26245482f5eda14a16009f36c78a468a -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26245482f5eda14a16009f36c78a468a nmdc:dobj-11-8gw9yv55 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26245482f5eda14a16009f36c78a468a nmdc:dobj-11-nvwgpn72 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:264bbbabc0400e955a1ee47b23899b85 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:264bbbabc0400e955a1ee47b23899b85 nmdc:dobj-11-bmgx0141 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:264bbbabc0400e955a1ee47b23899b85 nmdc:dobj-11-wfz6ab93 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7917ca1612bc2183c379fd41630fc868 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7917ca1612bc2183c379fd41630fc868 nmdc:dobj-11-wt3hv822 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7917ca1612bc2183c379fd41630fc868 nmdc:dobj-11-7t0emg92 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4afce32f5922f3d24974731cffa0e072 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4afce32f5922f3d24974731cffa0e072 nmdc:dobj-11-9ycf0n95 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4afce32f5922f3d24974731cffa0e072 nmdc:dobj-11-n99wmw22 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c31fd3626fcc7433c2ca7ec8cc7d5be -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c31fd3626fcc7433c2ca7ec8cc7d5be nmdc:dobj-11-4ygp0x93 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c31fd3626fcc7433c2ca7ec8cc7d5be nmdc:dobj-11-4444et39 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:28a110a5930d4437e661d088fccd2e5b -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28a110a5930d4437e661d088fccd2e5b nmdc:dobj-11-m72h0v81 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28a110a5930d4437e661d088fccd2e5b nmdc:dobj-11-4368e371 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc821ed55b3013746236929f35c07653 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-y4xgg069.1/nmdc_wfrbt-11-y4xgg069.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc821ed55b3013746236929f35c07653 nmdc:dobj-11-aaavp628 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2n4hp61/nmdc:wfrbt-11-wjkzqv59.1/nmdc_wfrbt-11-wjkzqv59.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc821ed55b3013746236929f35c07653 nmdc:dobj-11-j4gtmp38 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-r2n4hp61 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y4xgg069.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:496e20a5a725b9fe78cf583f35ed221f nmdc:wfrbt-11-y4xgg069.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wjkzqv59.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:496e20a5a725b9fe78cf583f35ed221f nmdc:wfrbt-11-wjkzqv59.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-r2n4hp61 INFO:root:omics_processing_id: nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:340ba2dc2e14b38bf653cbc8dcedaf9b nmdc:dobj-11-a24edq51 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:340ba2dc2e14b38bf653cbc8dcedaf9b nmdc:dobj-11-880b0c27 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zdmbqr75 -INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ndcfma41.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-ndcfma41.1 +INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-tp401g27.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-tp401g27.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9574a9d240faa7d14b437a54f781aae5 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-ndcfma41.1/nmdc_wfrqc-11-ndcfma41.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9574a9d240faa7d14b437a54f781aae5 nmdc:dobj-11-v1cb3760 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrqc-11-tp401g27.1/nmdc_wfrqc-11-tp401g27.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9574a9d240faa7d14b437a54f781aae5 nmdc:dobj-11-er80yx28 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ndcfma41.1_filtered.fastq.gz 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nmdc:819322fc2eb4d2ac7c0a660a09753c1a nmdc:wfrqc-11-ndcfma41.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tp401g27.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:819322fc2eb4d2ac7c0a660a09753c1a nmdc:wfrqc-11-tp401g27.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zdmbqr75 -INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vctrda65.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-vctrda65.1 +INFO:root:New activity id created for nmdc:omprc-11-zdmbqr75 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8355pd20.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfmgas-11-8355pd20.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6ca88412432aab946d39d1acc219493 -INFO:root:New file path computed for 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-scag2t38.1/nmdc_wfrbt-11-scag2t38.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:875dd6dee6a4037f6b8e1f9ddca12adb nmdc:dobj-11-0w8ars04 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:875dd6dee6a4037f6b8e1f9ddca12adb nmdc:dobj-11-hv6efp47 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scag2t38.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9541adfd8828f5845b5dac50624ee85 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-scag2t38.1/nmdc_wfrbt-11-scag2t38.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9541adfd8828f5845b5dac50624ee85 nmdc:dobj-11-q071zk38 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9541adfd8828f5845b5dac50624ee85 nmdc:dobj-11-37cpt107 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scag2t38.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80bd31c1a4547a82af98201bce0a62cb -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-scag2t38.1/nmdc_wfrbt-11-scag2t38.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80bd31c1a4547a82af98201bce0a62cb nmdc:dobj-11-2azb6a89 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80bd31c1a4547a82af98201bce0a62cb nmdc:dobj-11-y9dsk473 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scag2t38.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31763cdf3ec24a41415be8fe6b8a74f0 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-scag2t38.1/nmdc_wfrbt-11-scag2t38.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31763cdf3ec24a41415be8fe6b8a74f0 nmdc:dobj-11-w5w37m82 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31763cdf3ec24a41415be8fe6b8a74f0 nmdc:dobj-11-wh8yz316 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scag2t38.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:39b61c73ee7a96e6ed87665e511a5c36 -INFO:root:New file 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for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-scag2t38.1/nmdc_wfrbt-11-scag2t38.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa45d91d913487c869787b2b0f212cff nmdc:dobj-11-s8nqyg16 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zdmbqr75/nmdc:wfrbt-11-d5ztsj41.1/nmdc_wfrbt-11-d5ztsj41.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa45d91d913487c869787b2b0f212cff nmdc:dobj-11-r7k6fz92 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zdmbqr75 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-scag2t38.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d5ztsj41.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2fa167e49f18a399b4714c4d0faef45f 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-y0hz8j08.1/nmdc_wfmgas-11-y0hz8j08.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f088c7e9b432749259d69bd53adaa219 nmdc:dobj-11-vbr16p69 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfmgas-11-xppe6x73.1/nmdc_wfmgas-11-xppe6x73.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f088c7e9b432749259d69bd53adaa219 nmdc:dobj-11-r1fs1x02 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y0hz8j08.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xppe6x73.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a868f3f8fabbcc34c3151e698428131e -INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-g1sbn250.1/nmdc_wfrbt-11-g1sbn250.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9fb2a2248fc685d9bc638da2282f3ec nmdc:dobj-11-zcr4j540 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9fb2a2248fc685d9bc638da2282f3ec nmdc:dobj-11-rj489690 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1sbn250.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8567bfd74a6af58671e4bf628b8d1f55 -INFO:root:New file path computed for GOTTCHA2 Report Full: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-g1sbn250.1/nmdc_wfrbt-11-g1sbn250.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:609193d1827fe0bf84b2619482b9516b nmdc:dobj-11-rya37v70 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:609193d1827fe0bf84b2619482b9516b nmdc:dobj-11-rgp0pa67 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1sbn250.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bdd0a982ee857564d4a5b2034350745f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-g1sbn250.1/nmdc_wfrbt-11-g1sbn250.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdd0a982ee857564d4a5b2034350745f nmdc:dobj-11-djhsq235 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdd0a982ee857564d4a5b2034350745f nmdc:dobj-11-ea7v0177 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1sbn250.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:83c139787bbf71432e75394b91245fbd -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-g1sbn250.1/nmdc_wfrbt-11-g1sbn250.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83c139787bbf71432e75394b91245fbd nmdc:dobj-11-wnmjn013 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:83c139787bbf71432e75394b91245fbd nmdc:dobj-11-v7nb7366 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1sbn250.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12a138a940e31fb8b2d795f5d96faffe -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-g1sbn250.1/nmdc_wfrbt-11-g1sbn250.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12a138a940e31fb8b2d795f5d96faffe nmdc:dobj-11-71935806 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12a138a940e31fb8b2d795f5d96faffe nmdc:dobj-11-cwxqry59 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1sbn250.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:33fc7959840a415b298e740ba687ff1b -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-g1sbn250.1/nmdc_wfrbt-11-g1sbn250.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33fc7959840a415b298e740ba687ff1b nmdc:dobj-11-z1qr7925 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33fc7959840a415b298e740ba687ff1b nmdc:dobj-11-jg3c1h26 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1sbn250.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c49776b0c1e9a723028d64765d461dde -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-g1sbn250.1/nmdc_wfrbt-11-g1sbn250.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c49776b0c1e9a723028d64765d461dde nmdc:dobj-11-jedvkx94 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c49776b0c1e9a723028d64765d461dde nmdc:dobj-11-qxph0y95 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1sbn250.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:897f78d77df302e2725502f48a8da32f -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-g1sbn250.1/nmdc_wfrbt-11-g1sbn250.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:897f78d77df302e2725502f48a8da32f nmdc:dobj-11-xmqfcx07 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a9bm9657/nmdc:wfrbt-11-rhncej56.1/nmdc_wfrbt-11-rhncej56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:897f78d77df302e2725502f48a8da32f nmdc:dobj-11-bcdrdg25 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a9bm9657 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1sbn250.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c814a61c3b6db425d1be7c1130f7d74a nmdc:wfrbt-11-g1sbn250.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rhncej56.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c814a61c3b6db425d1be7c1130f7d74a nmdc:wfrbt-11-rhncej56.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a9bm9657 +INFO:root:omics_processing_id: nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22afa3d49b73eaec2e9787a6b88fbdc3 nmdc:dobj-11-zg3a0b57 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-xzrs8q03 +INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xje7g653.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-xje7g653.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f107af0a000ec0b90e157fc09473c337 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-xje7g653.1/nmdc_wfrqc-11-xje7g653.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f107af0a000ec0b90e157fc09473c337 nmdc:dobj-11-jbwjpp15 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xje7g653.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:71528f677698dd6657ea7ddcc3105184 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrqc-11-xje7g653.1/nmdc_wfrqc-11-xje7g653.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:71528f677698dd6657ea7ddcc3105184 nmdc:dobj-11-x8yg5422 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xje7g653.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fdefb3fa15098906cf788f5cadf17bb3 nmdc:wfrqc-11-xje7g653.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-xzrs8q03 +INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-v6fyr976.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37573bca240f88091720ae61ae5c9452 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37573bca240f88091720ae61ae5c9452 nmdc:dobj-11-pzf2xk33 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:220c85a9e2d470157aed7a7556f85656 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:220c85a9e2d470157aed7a7556f85656 nmdc:dobj-11-eh58kr58 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3298d022868e8b0e7cfb783015b93ed +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3298d022868e8b0e7cfb783015b93ed nmdc:dobj-11-h099ww45 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fc528f0105fc163876d68df26d35b29 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fc528f0105fc163876d68df26d35b29 nmdc:dobj-11-z79cjc40 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da186671c5a581af0a7d195bd857c871 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfmgas-11-v6fyr976.1/nmdc_wfmgas-11-v6fyr976.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da186671c5a581af0a7d195bd857c871 nmdc:dobj-11-drpt5d81 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v6fyr976.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:fdefb3fa15098906cf788f5cadf17bb3 nmdc:wfmgas-11-v6fyr976.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-xzrs8q03 +INFO:root:New activity id created for nmdc:omprc-11-xzrs8q03 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2xgmaf87.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a4ea037d55cc51cf0755a93b39065c8d +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4ea037d55cc51cf0755a93b39065c8d nmdc:dobj-11-cd1v4e40 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e5e80996fc502919f163e2d31ecc4a4 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e5e80996fc502919f163e2d31ecc4a4 nmdc:dobj-11-qr5wav26 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5739a086e797487fdaa68c071642442 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5739a086e797487fdaa68c071642442 nmdc:dobj-11-yv30vq09 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36092d7c1c12826904bc9f9553eba0ae +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36092d7c1c12826904bc9f9553eba0ae nmdc:dobj-11-6q8rg936 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-xzrs8q03 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2xgmaf87.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd8140150b0e48fe4362a5913e6b9da2 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xzrs8q03/nmdc:wfrbt-11-2xgmaf87.1/nmdc_wfrbt-11-2xgmaf87.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd8140150b0e48fe4362a5913e6b9da2 nmdc:dobj-11-x5xvhz14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-xzrs8q03 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nmdc_wfrbt-11-6t41r714.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e903718c24ca349fe79cb1dccadcbf9 -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-6t41r714.1/nmdc_wfrbt-11-6t41r714.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e903718c24ca349fe79cb1dccadcbf9 nmdc:dobj-11-05z21777 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-jvvmbz87.1/nmdc_wfrbt-11-jvvmbz87.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e903718c24ca349fe79cb1dccadcbf9 nmdc:dobj-11-qfa7cn97 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-99yaxg68 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nmdc:omprc-11-99yaxg68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6t41r714.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e62ccb864b04c2baca7414ef6492c477 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-6t41r714.1/nmdc_wfrbt-11-6t41r714.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e62ccb864b04c2baca7414ef6492c477 nmdc:dobj-11-7kfzef17 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-jvvmbz87.1/nmdc_wfrbt-11-jvvmbz87.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e62ccb864b04c2baca7414ef6492c477 nmdc:dobj-11-mrfqcb50 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-99yaxg68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6t41r714.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b4e0bc10933d603310e2d6212bd8368 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-6t41r714.1/nmdc_wfrbt-11-6t41r714.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b4e0bc10933d603310e2d6212bd8368 nmdc:dobj-11-1d3b1g46 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-jvvmbz87.1/nmdc_wfrbt-11-jvvmbz87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b4e0bc10933d603310e2d6212bd8368 nmdc:dobj-11-yr6kwh76 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-99yaxg68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6t41r714.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ab8214f4c30e07cd531a1047382ccdf -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-6t41r714.1/nmdc_wfrbt-11-6t41r714.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ab8214f4c30e07cd531a1047382ccdf nmdc:dobj-11-atxefq98 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-jvvmbz87.1/nmdc_wfrbt-11-jvvmbz87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ab8214f4c30e07cd531a1047382ccdf nmdc:dobj-11-1bf7t772 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-99yaxg68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6t41r714.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-6t41r714.1/nmdc_wfrbt-11-6t41r714.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 nmdc:dobj-11-wmxgft78 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-99yaxg68/nmdc:wfrbt-11-jvvmbz87.1/nmdc_wfrbt-11-jvvmbz87.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e945d143b6fd14901ff3c7ec7ca4bc4 nmdc:dobj-11-hptxrj69 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-99yaxg68 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6t41r714.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fa1a0488d644f315d70f72be2890c210 nmdc:wfrbt-11-6t41r714.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jvvmbz87.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fa1a0488d644f315d70f72be2890c210 nmdc:wfrbt-11-jvvmbz87.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-99yaxg68 INFO:root:omics_processing_id: nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:995c8b403d4ae43206bcd9cb0168d7a7 nmdc:dobj-11-z2sh6g63 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:995c8b403d4ae43206bcd9cb0168d7a7 nmdc:dobj-11-tj0apk21 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-6xbw1f88 -INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-kjj5s269.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-kjj5s269.1 +INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8n3m3s13.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-8n3m3s13.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3a37b36f633811e92deca2b8825a5c21 -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-kjj5s269.1/nmdc_wfrqc-11-kjj5s269.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a37b36f633811e92deca2b8825a5c21 nmdc:dobj-11-96fqdp82 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-8n3m3s13.1/nmdc_wfrqc-11-8n3m3s13.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a37b36f633811e92deca2b8825a5c21 nmdc:dobj-11-e24eak84 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kjj5s269.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8n3m3s13.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d98a508ec377e189bf67fcc3431e8b88 -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-kjj5s269.1/nmdc_wfrqc-11-kjj5s269.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d98a508ec377e189bf67fcc3431e8b88 nmdc:dobj-11-04593x15 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrqc-11-8n3m3s13.1/nmdc_wfrqc-11-8n3m3s13.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d98a508ec377e189bf67fcc3431e8b88 nmdc:dobj-11-g959ee77 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kjj5s269.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfrqc-11-kjj5s269.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8n3m3s13.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfrqc-11-8n3m3s13.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-6xbw1f88 -INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4h3cp287.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-4h3cp287.1 +INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6ap4gt44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26026229fd13197a44f11b85645edd43 -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-4h3cp287.1/nmdc_wfmgas-11-4h3cp287.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26026229fd13197a44f11b85645edd43 nmdc:dobj-11-qxt0vb45 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26026229fd13197a44f11b85645edd43 nmdc:dobj-11-90vvmq97 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4h3cp287.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03fc202448c65de6e565ac5692b8dc99 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-4h3cp287.1/nmdc_wfmgas-11-4h3cp287.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03fc202448c65de6e565ac5692b8dc99 nmdc:dobj-11-sy94zr87 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03fc202448c65de6e565ac5692b8dc99 nmdc:dobj-11-6mbw5f60 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4h3cp287.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96435c6e9802f9ad5987d851d22abaa0 -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-4h3cp287.1/nmdc_wfmgas-11-4h3cp287.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96435c6e9802f9ad5987d851d22abaa0 nmdc:dobj-11-gwzwxz62 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96435c6e9802f9ad5987d851d22abaa0 nmdc:dobj-11-ew3nw928 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4h3cp287.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9345663cca27d20f5657dad69d175d37 -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-4h3cp287.1/nmdc_wfmgas-11-4h3cp287.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9345663cca27d20f5657dad69d175d37 nmdc:dobj-11-qxs1xb25 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9345663cca27d20f5657dad69d175d37 nmdc:dobj-11-e553f279 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4h3cp287.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc257584ae17f52d32a01e9a1d50c0fd -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-4h3cp287.1/nmdc_wfmgas-11-4h3cp287.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc257584ae17f52d32a01e9a1d50c0fd nmdc:dobj-11-3qb2z197 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfmgas-11-6ap4gt44.1/nmdc_wfmgas-11-6ap4gt44.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc257584ae17f52d32a01e9a1d50c0fd nmdc:dobj-11-fdhhaf23 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4h3cp287.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfmgas-11-4h3cp287.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6ap4gt44.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfmgas-11-6ap4gt44.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-6xbw1f88 -INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ca2tm271.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1 +INFO:root:New activity id created for nmdc:omprc-11-6xbw1f88 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-q3fw8c17.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36bd9a52ed3e442caebd9f28f415a941 -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36bd9a52ed3e442caebd9f28f415a941 nmdc:dobj-11-5cfh2t26 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36bd9a52ed3e442caebd9f28f415a941 nmdc:dobj-11-4szz1884 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e37082ea33aa54468afde0c0e6cb59f2 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e37082ea33aa54468afde0c0e6cb59f2 nmdc:dobj-11-8ees7v18 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e37082ea33aa54468afde0c0e6cb59f2 nmdc:dobj-11-xgz2y782 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:428b3ab09a9031d1fbd466c45aaaeca6 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428b3ab09a9031d1fbd466c45aaaeca6 nmdc:dobj-11-vgk0hb12 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428b3ab09a9031d1fbd466c45aaaeca6 nmdc:dobj-11-jrsa3n26 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3f5c2553674a92ac266ba10f691fe5e -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3f5c2553674a92ac266ba10f691fe5e nmdc:dobj-11-2mrvww11 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3f5c2553674a92ac266ba10f691fe5e nmdc:dobj-11-g2yrea08 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3fb3515d3cd4bc9c971745ad9e5a4408 -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fb3515d3cd4bc9c971745ad9e5a4408 nmdc:dobj-11-b4hhew29 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3fb3515d3cd4bc9c971745ad9e5a4408 nmdc:dobj-11-04z3c256 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea19d630f32fa0891964ab3bde5f893e -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea19d630f32fa0891964ab3bde5f893e nmdc:dobj-11-yet3r192 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea19d630f32fa0891964ab3bde5f893e nmdc:dobj-11-g1p7kw68 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc700ccae8797c8c7ce770b2210bd290 -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc700ccae8797c8c7ce770b2210bd290 nmdc:dobj-11-vyz19950 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc700ccae8797c8c7ce770b2210bd290 nmdc:dobj-11-0kr7fx40 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f5b9a1d0957b879d0c82e9f2a11914f -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f5b9a1d0957b879d0c82e9f2a11914f nmdc:dobj-11-6jcnnf39 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f5b9a1d0957b879d0c82e9f2a11914f nmdc:dobj-11-p08dkb94 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8787e5f46555ffac92b9a21be6d3a463 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-ca2tm271.1/nmdc_wfrbt-11-ca2tm271.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8787e5f46555ffac92b9a21be6d3a463 nmdc:dobj-11-7etd6a35 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6xbw1f88/nmdc:wfrbt-11-q3fw8c17.1/nmdc_wfrbt-11-q3fw8c17.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8787e5f46555ffac92b9a21be6d3a463 nmdc:dobj-11-qq2pz859 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-6xbw1f88 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ca2tm271.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfrbt-11-ca2tm271.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-q3fw8c17.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:78e9f2c178e9ab173098ff3bf9a47d24 nmdc:wfrbt-11-q3fw8c17.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-6xbw1f88 INFO:root:omics_processing_id: nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:849a332324e4c8e23d5487d866ea8ac3 nmdc:dobj-11-rsxk7906 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:849a332324e4c8e23d5487d866ea8ac3 nmdc:dobj-11-0q9xaa11 INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-hxcj5q62 -INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7bkf8389.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-7bkf8389.1 +INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-x4ggxb20.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-x4ggxb20.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c37ac17298f27be2fb79df5c9fd6cd9e -INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-7bkf8389.1/nmdc_wfrqc-11-7bkf8389.1_filtered.fastq.gz -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c37ac17298f27be2fb79df5c9fd6cd9e nmdc:dobj-11-dv6k5r70 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-x4ggxb20.1/nmdc_wfrqc-11-x4ggxb20.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c37ac17298f27be2fb79df5c9fd6cd9e nmdc:dobj-11-057drk90 INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7bkf8389.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x4ggxb20.1_filtered.fastq.gz INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c50be41e97736244d5161d984422a2d -INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-7bkf8389.1/nmdc_wfrqc-11-7bkf8389.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c50be41e97736244d5161d984422a2d nmdc:dobj-11-k0q6v897 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrqc-11-x4ggxb20.1/nmdc_wfrqc-11-x4ggxb20.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c50be41e97736244d5161d984422a2d nmdc:dobj-11-se0y5v07 INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7bkf8389.1_filterStats.txt -INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfrqc-11-7bkf8389.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x4ggxb20.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfrqc-11-x4ggxb20.1 INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-hxcj5q62 -INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-6bz85g77.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-6bz85g77.1 +INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7xa15y08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e0c8d776a3f21d577c5ab013ecbf07c -INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-6bz85g77.1/nmdc_wfmgas-11-6bz85g77.1_contigs.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0c8d776a3f21d577c5ab013ecbf07c nmdc:dobj-11-ffzpvf47 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1/nmdc_wfmgas-11-7xa15y08.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e0c8d776a3f21d577c5ab013ecbf07c nmdc:dobj-11-fqctqq44 INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6bz85g77.1_contigs.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7xa15y08.1_contigs.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:08c46e594044bd99912767da0ab6c912 -INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-6bz85g77.1/nmdc_wfmgas-11-6bz85g77.1_scaffolds.fna -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08c46e594044bd99912767da0ab6c912 nmdc:dobj-11-pbfgnr42 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1/nmdc_wfmgas-11-7xa15y08.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08c46e594044bd99912767da0ab6c912 nmdc:dobj-11-hen7n454 INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6bz85g77.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7xa15y08.1_scaffolds.fna INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8977a29ea63d280856e001d59a74786f -INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-6bz85g77.1/nmdc_wfmgas-11-6bz85g77.1_covstats.txt -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8977a29ea63d280856e001d59a74786f nmdc:dobj-11-7kkevw51 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1/nmdc_wfmgas-11-7xa15y08.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8977a29ea63d280856e001d59a74786f nmdc:dobj-11-ntqsx566 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6bz85g77.1_covstats.txt +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7xa15y08.1_covstats.txt INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02ee0361c81b2a216d2688d14bbd444c -INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-6bz85g77.1/nmdc_wfmgas-11-6bz85g77.1_assembly.agp -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02ee0361c81b2a216d2688d14bbd444c nmdc:dobj-11-557m6t14 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1/nmdc_wfmgas-11-7xa15y08.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02ee0361c81b2a216d2688d14bbd444c nmdc:dobj-11-4wbesn40 INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6bz85g77.1_assembly.agp +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7xa15y08.1_assembly.agp INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56ec99c49845a93cfdab5386b4fbae00 -INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-6bz85g77.1/nmdc_wfmgas-11-6bz85g77.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56ec99c49845a93cfdab5386b4fbae00 nmdc:dobj-11-639qha28 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfmgas-11-7xa15y08.1/nmdc_wfmgas-11-7xa15y08.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56ec99c49845a93cfdab5386b4fbae00 nmdc:dobj-11-r2rkge47 INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6bz85g77.1_pairedMapped_sorted.bam -INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfmgas-11-6bz85g77.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7xa15y08.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfmgas-11-7xa15y08.1 INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-hxcj5q62 -INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jwnrhk12.1 -INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1 +INFO:root:New activity id created for nmdc:omprc-11-hxcj5q62 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ebdwjw61.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1 INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd615655a16d0631c00edfb1b4794b8a -INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_gottcha2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd615655a16d0631c00edfb1b4794b8a nmdc:dobj-11-91exa373 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd615655a16d0631c00edfb1b4794b8a nmdc:dobj-11-me7vgp91 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_gottcha2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cbb6016f57f643796497809739dc31c6 -INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_gottcha2_report_full.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbb6016f57f643796497809739dc31c6 nmdc:dobj-11-1j8jc606 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cbb6016f57f643796497809739dc31c6 nmdc:dobj-11-j5s3kx39 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_gottcha2_report_full.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59a25ae32482a78fc21a817b4c551da7 -INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_gottcha2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59a25ae32482a78fc21a817b4c551da7 nmdc:dobj-11-kyqb3m45 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59a25ae32482a78fc21a817b4c551da7 nmdc:dobj-11-fhyc3x56 INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_gottcha2_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6548fd3eb77efb01cdabcfeb8817057f -INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_centrifuge_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6548fd3eb77efb01cdabcfeb8817057f nmdc:dobj-11-rb1xyz90 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6548fd3eb77efb01cdabcfeb8817057f nmdc:dobj-11-nn91hh39 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_centrifuge_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c2ff0fa755825ef34d1e16a446a5ae6b -INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_centrifuge_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2ff0fa755825ef34d1e16a446a5ae6b nmdc:dobj-11-kmp3xq29 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2ff0fa755825ef34d1e16a446a5ae6b nmdc:dobj-11-0cfm4e33 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_centrifuge_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5818a24d6afb5332a741be700acc060 -INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_centrifuge_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5818a24d6afb5332a741be700acc060 nmdc:dobj-11-z5vd5r61 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5818a24d6afb5332a741be700acc060 nmdc:dobj-11-prdg3h91 INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_centrifuge_krona.html INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dbc5139e3c05806778ab3450dbcb63ba -INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_kraken2_classification.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dbc5139e3c05806778ab3450dbcb63ba nmdc:dobj-11-8sstqn92 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dbc5139e3c05806778ab3450dbcb63ba nmdc:dobj-11-z066pd07 INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_kraken2_classification.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b61b15ddd0a879bede3b73471849a3a4 -INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_kraken2_report.tsv -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b61b15ddd0a879bede3b73471849a3a4 nmdc:dobj-11-nq8pgh38 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b61b15ddd0a879bede3b73471849a3a4 nmdc:dobj-11-53gn2a30 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_kraken2_report.tsv INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 -INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-jwnrhk12.1/nmdc_wfrbt-11-jwnrhk12.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 nmdc:dobj-11-60r6ks14 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-hxcj5q62/nmdc:wfrbt-11-ebdwjw61.1/nmdc_wfrbt-11-ebdwjw61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3adba17be3d0f7e9ee945aa30ba11bb2 nmdc:dobj-11-f0gyav98 INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-hxcj5q62 -INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jwnrhk12.1_kraken2_krona.html -INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfrbt-11-jwnrhk12.1 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ebdwjw61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:061846685755316cd5f20d4035212ba1 nmdc:wfrbt-11-ebdwjw61.1 INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-hxcj5q62 -INFO:root:Writing 90 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_re_ided_record_dump.json -INFO:root:Elapsed time: 1007.5710978507996 +INFO:root:Writing 107 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-33fbta56_re_ided_record_dump.json +INFO:root:Elapsed time: 1089.2181107997894 diff --git a/nmdc_automation/re_iding/scripts/nmdc:sty-11-547rwq94_extract_records.log b/nmdc_automation/re_iding/scripts/nmdc:sty-11-547rwq94_extract_records.log new file mode 100644 index 00000000..56ad2726 --- /dev/null +++ b/nmdc_automation/re_iding/scripts/nmdc:sty-11-547rwq94_extract_records.log @@ -0,0 +1,11605 @@ +/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/urllib3/__init__.py:34: NotOpenSSLWarning: urllib3 v2 only supports OpenSSL 1.1.1+, currently the 'ssl' module is compiled with 'LibreSSL 2.8.3'. See: https://github.com/urllib3/urllib3/issues/3020 + warnings.warn( +INFO:root:Extracting workflow records for study_id: nmdc:sty-11-547rwq94 +INFO:root:study_id: nmdc:sty-11-547rwq94 +INFO:root:Retrieved 80 OmicsProcessing records for study nmdc:sty-11-547rwq94 +INFO:root:omics_processing_record: nmdc:omprc-11-b4hr7x49 +INFO:root:legacy_id: gold:Gp0452547 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-b4hr7x49 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9f6b1d66ed59a7eeb111f3940c4c2870 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2e08bd88c7df264282772667984b1f18 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:94924d86576c5c258fcf959ba6a312f9 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452547 +INFO:root:found 3 records +INFO:root:record: nmdc:f62650f0d7c4c8b9a4a852a478c8f8c5, Read QC Activity for nmdc:mga0pvf031 +INFO:root:PassingDataObject: nmdc:9cf7a7e296a49bfdc1c923da679ed774 +INFO:root:PassingDataObject: nmdc:8eff093598ad1cca7f4729afcbaeb648 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:a5bcd8fd394b6c81c87b7729848efac1, Read QC Activity for nmdc:mga0ctkz49 +INFO:root:PassingDataObject: nmdc:d29cdebdd92ce85b6dcf32d913e495db +INFO:root:PassingDataObject: nmdc:2bf234c4b1e1bebb57bb024a98263707 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:097a88676de66bd72ee2d18ee150ebae, Read QC Activity for nmdc:mga0szsj83 +INFO:root:PassingDataObject: nmdc:84f3256226d69e856d6bd15f80ae300d +INFO:root:PassingDataObject: nmdc:0c6b9d150c549544c1534d195f07d1ae +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452547 +INFO:root:found 3 records +INFO:root:record: nmdc:a5bcd8fd394b6c81c87b7729848efac1, ReadBased Analysis Activity for nmdc:mga0ctkz49 +INFO:root:PassingDataObject: nmdc:019fa10cc20877f5ac01bdf7b8f7dfe4 +INFO:root:PassingDataObject: nmdc:023d0ffe21751f4f4bdfadf0b67eae36 +INFO:root:PassingDataObject: nmdc:62a2a0735db29bbad611a24ede4c5732 +INFO:root:PassingDataObject: nmdc:d6efe738b880fd8c6f12a52f8021b6fa +INFO:root:PassingDataObject: nmdc:b1546529117ab336f08a7d6a381113e0 +INFO:root:PassingDataObject: nmdc:130ec2353031572d120d14d2e8f1004a +INFO:root:PassingDataObject: nmdc:409592a41a6ba180dab95c04409476dd +INFO:root:PassingDataObject: nmdc:bf76cb10fc00d5a93db4b12193cb72ea +INFO:root:PassingDataObject: nmdc:ff3af8aee1fce81473751cbefcf90915 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:f62650f0d7c4c8b9a4a852a478c8f8c5, ReadBased Analysis Activity for nmdc:mga0pvf031 +INFO:root:PassingDataObject: nmdc:793e52f36949ee3afe6b45f24f5e0a89 +INFO:root:PassingDataObject: nmdc:436dc84ca5cb6f2a474d2d8d894a103e +INFO:root:PassingDataObject: nmdc:d79c303c1ab9f33bdc0d559398110484 +INFO:root:PassingDataObject: nmdc:9f25709774d2eaa7781f80828e9798a3 +INFO:root:PassingDataObject: nmdc:c18fd0b22207bc4d2f3e3ab1ff6a1f0f +INFO:root:PassingDataObject: nmdc:e40d0107c48f8cc73e8b986c1a5724aa +INFO:root:PassingDataObject: nmdc:1ed101ebd0b0eb9133b397f69e0cda97 +INFO:root:PassingDataObject: nmdc:f79808edc0651d86078128ce3a82392a +INFO:root:PassingDataObject: nmdc:fc303930867756dd9fa6498cd37eef0f +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:097a88676de66bd72ee2d18ee150ebae, ReadBased Analysis Activity for nmdc:mga0szsj83 +INFO:root:PassingDataObject: nmdc:d2f1bd2ce0e20657cc0fa2c3a78e0338 +INFO:root:PassingDataObject: nmdc:b749cd27e23f077f79f9628b35e6049c +INFO:root:PassingDataObject: nmdc:e499fed8219e8cd0e52888b5c3386b96 +INFO:root:PassingDataObject: nmdc:0102de5715f4669843c9ce95d7582402 +INFO:root:PassingDataObject: nmdc:17e5468ee599f08b2caa277f1ea2eb9f +INFO:root:PassingDataObject: nmdc:c133477e2b2c5924f958fb2c932ddbe5 +INFO:root:PassingDataObject: nmdc:2f2a975c8aa991fcfd537af3c5b29785 +INFO:root:PassingDataObject: nmdc:676a61b282f7668a22bf73ce4071d0ad +INFO:root:PassingDataObject: nmdc:0e4e7a0eff6d32ad3a4f789b18006480 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452547 +INFO:root:found 3 records +INFO:root:record: nmdc:a5bcd8fd394b6c81c87b7729848efac1, Assembly Activity for nmdc:mga0ctkz49 +INFO:root:PassingDataObject: nmdc:ca1ab1d22c66d61ad6a96d546be3fedb +INFO:root:PassingDataObject: nmdc:4a501251320cba5223b7bc62127cff06 +INFO:root:PassingDataObject: nmdc:a924b2073ba6182bbe49f96a504ac621 +INFO:root:PassingDataObject: nmdc:8ee7cc7a603455f889af143db03a7065 +INFO:root:PassingDataObject: nmdc:fc5314742b9ddd1f8cf26189d64cdaec +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:f62650f0d7c4c8b9a4a852a478c8f8c5, Assembly Activity for nmdc:mga0pvf031 +INFO:root:PassingDataObject: nmdc:63f9b085b8a2012e36c3a7942322429e +INFO:root:PassingDataObject: nmdc:ff84d15af101b138efeef313ccd8c4a8 +INFO:root:PassingDataObject: nmdc:3b16cfb81b30d822773dbd08038d4bef +INFO:root:PassingDataObject: nmdc:1f5465edee395e919239c69f58859dd8 +INFO:root:PassingDataObject: nmdc:811ee579e6a0feedb6bd87606ec75e02 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:097a88676de66bd72ee2d18ee150ebae, Assembly Activity for nmdc:mga0szsj83 +INFO:root:PassingDataObject: nmdc:c74fe6e6f0fd225b119a750aea04d283 +INFO:root:PassingDataObject: nmdc:7b16784fa30a8d5da79d07ba5fe7627b +INFO:root:PassingDataObject: nmdc:4d9348c294cc6f2924616383a37bd132 +INFO:root:PassingDataObject: nmdc:10cba94ea4abe24ed387c2fa136554ac +INFO:root:PassingDataObject: nmdc:1b87ba1126ee648ee750d846011931e3 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452547 +INFO:root:found 3 records +INFO:root:record: nmdc:a5bcd8fd394b6c81c87b7729848efac1, Annotation Activity for nmdc:mga0ctkz49 +INFO:root:PassingDataObject: nmdc:2ab9dbf08ad4e7852cdf438f237536e0 +INFO:root:PassingDataObject: nmdc:9019ec43e186d7d70e5318548dd25858 +INFO:root:PassingDataObject: nmdc:f452ff55fa1ed8bb3cb60abe476c578d +INFO:root:PassingDataObject: nmdc:a6aa8a1cff965d1e651e48134c810552 +INFO:root:PassingDataObject: nmdc:b3372a69504c0779cede827ea405ccc6 +INFO:root:PassingDataObject: nmdc:35402f988bce7ee5cc6bb427f79f591a +INFO:root:PassingDataObject: nmdc:54aa0e212dccf80e33ac982340434e69 +INFO:root:PassingDataObject: nmdc:8b894ae3c47a442e0310164b1168ebff +INFO:root:PassingDataObject: nmdc:83f74578b49f77b82ffa89bc992c1a62 +INFO:root:PassingDataObject: nmdc:cf26e1a103cfd13756d45af9d01467ec +INFO:root:PassingDataObject: nmdc:53ae70ff1d74ac982449ad8ff119b13d +INFO:root:PassingDataObject: nmdc:052177aba6dbfc5277291c211387ceed +INFO:root:PassingDataObject: nmdc:cae23990a116edbc72ff078fe908504a +INFO:root:PassingDataObject: nmdc:48ddb6620c4e59baf284d33f59fe4a0b +INFO:root:PassingDataObject: nmdc:3cd68987cc3232ca0104dbc2090fb09e +INFO:root:PassingDataObject: nmdc:1a6b9343555d8ca3e5f3c436700047c2 +INFO:root:PassingDataObject: nmdc:1f6ba3e74844526f6a030876efc8aaf2 +INFO:root:PassingDataObject: nmdc:9c89719f390f81d654eaf6d49ad5c185 +INFO:root:PassingDataObject: nmdc:46000b49cf4afdaefa6eb6da09a20136 +INFO:root:PassingDataObject: nmdc:dfe5c39775fcda3ee25a85571e0ff94f +INFO:root:PassingDataObject: nmdc:0d6492adb94d676426aab3f53a59ef61 +INFO:root:PassingDataObject: nmdc:c2a0a7a7fe6ede5d9e16fe9f8777bcef +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:f62650f0d7c4c8b9a4a852a478c8f8c5, Annotation Activity for nmdc:mga0pvf031 +INFO:root:PassingDataObject: nmdc:767242f7ccb5d3253894bcb215f5a4c4 +INFO:root:PassingDataObject: nmdc:35f0e900d1eda290e13ec56e339c7309 +INFO:root:PassingDataObject: nmdc:826088015c3317d4c1b8dc11ee658ecc +INFO:root:PassingDataObject: nmdc:25b4e78868c77e3016639e7fe4c5139b +INFO:root:PassingDataObject: nmdc:a9e6d906190fcf306eec3b50689335bf +INFO:root:PassingDataObject: nmdc:7cf78f20fb22579e88917be09afa92b6 +INFO:root:PassingDataObject: nmdc:39ac3e75298217c3a2065a034c19048e +INFO:root:PassingDataObject: nmdc:a5c4c4ef0f86e76e8efd9999cff90af3 +INFO:root:PassingDataObject: nmdc:15e7a15877979c6e62a17484942d9dca +INFO:root:PassingDataObject: nmdc:edf573b1787639f5a5f138c0e13b009c +INFO:root:PassingDataObject: nmdc:e34b06a21e3149c804764aa3011283b8 +INFO:root:PassingDataObject: nmdc:868c7dc9953f0cfc5216ab01338e3be3 +INFO:root:PassingDataObject: nmdc:b39adfadc96c1b0440d211ee13e4d83b +INFO:root:PassingDataObject: nmdc:86735f02ed474488a31dcf31f393c6f1 +INFO:root:PassingDataObject: nmdc:32f23c5c72d3b049908ab7ff107b571c +INFO:root:PassingDataObject: nmdc:4a41d530a72f3695e88caa8e7c646922 +INFO:root:PassingDataObject: nmdc:e4dc8a45ec3301e27cf525637adca349 +INFO:root:PassingDataObject: nmdc:c51d0324299b593dd1b7577bfe32d491 +INFO:root:PassingDataObject: nmdc:ae408dc49c24b7f7d899964da6a31246 +INFO:root:PassingDataObject: nmdc:f82a9418d02feb6da1270452cc51cbb6 +INFO:root:PassingDataObject: nmdc:d8e96988c08b27bc65af0ffcfa96e359 +INFO:root:PassingDataObject: nmdc:7bc25a0b14c534bc58634ee7ec989cf0 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:097a88676de66bd72ee2d18ee150ebae, Annotation Activity for nmdc:mga0szsj83 +INFO:root:PassingDataObject: nmdc:0690aa9d95ccdcbcaa1d19f573dec478 +INFO:root:PassingDataObject: nmdc:f8f31035118f7ac33d98c9cd2fc7830e +INFO:root:PassingDataObject: nmdc:f5cb57e9559430f9c8f4040552fe8e90 +INFO:root:PassingDataObject: nmdc:becdac2d06b44ed2151ec213c1f0c8f3 +INFO:root:PassingDataObject: nmdc:9df38138184bb62be0312c6ff61b27ce +INFO:root:PassingDataObject: nmdc:2e6aaa5771c8147d4b04c9d2b64fb6d4 +INFO:root:PassingDataObject: nmdc:ee18b2b92b8a585d932d502896ac34bb +INFO:root:PassingDataObject: nmdc:96220b523a90d279609591091e378a1e +INFO:root:PassingDataObject: nmdc:370c30682869be149dcd7fa162874149 +INFO:root:PassingDataObject: nmdc:9b75d70f96e67eb4fd7c3e81d5c84aa4 +INFO:root:PassingDataObject: nmdc:dccd2eab65fd7c68ec286e0798b7354e +INFO:root:PassingDataObject: nmdc:9fc03f0bcccd7ea6e3406529c63f1c94 +INFO:root:PassingDataObject: nmdc:11a0df9950bc6f4d4c84c2edae9bab5e +INFO:root:PassingDataObject: nmdc:4ff840e1b847a641e5ae9abf96f849d6 +INFO:root:PassingDataObject: nmdc:0bbdb245a8ec485b323c88b856dc302a +INFO:root:PassingDataObject: nmdc:e76419501c3078e3efeca0a8cf8de2fc +INFO:root:PassingDataObject: nmdc:a6a4b43487e71ee7e25dab740003a86b +INFO:root:PassingDataObject: nmdc:c9e19d160588f13e224154ba01d3d232 +INFO:root:PassingDataObject: nmdc:f4ed947b80424b31109e3b8a90d8e77c +INFO:root:PassingDataObject: nmdc:99524567780397ce1d66979fed29891b +INFO:root:PassingDataObject: nmdc:262b0fddf636c0e0c367ebb07a46b066 +INFO:root:PassingDataObject: nmdc:2c9e995311a31d142b875052bb08d28b +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 3 +INFO:root:set_name: mags_activity_set for gold:Gp0452547 +INFO:root:found 3 records +INFO:root:record: nmdc:a5bcd8fd394b6c81c87b7729848efac1, MAGs Analysis Activity for nmdc:mga0ctkz49 +INFO:root:PassingDataObject: nmdc:bb7ff52011af8805de3beb6d8d2aab88 +INFO:root:PassingDataObject: nmdc:dcad6db663012ef8fbbbfac385efa177 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:f62650f0d7c4c8b9a4a852a478c8f8c5, MAGs Analysis Activity for nmdc:mga0pvf031 +INFO:root:PassingDataObject: nmdc:d3b0d5f0ef03c6e0d797725c36427a72 +INFO:root:PassingDataObject: nmdc:0f1de6eca867698255379727bf5eaecb +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:097a88676de66bd72ee2d18ee150ebae, MAGs Analysis Activity for nmdc:mga0szsj83 +INFO:root:PassingDataObject: nmdc:db3d43eebb635c030f01aca407f648a3 +INFO:root:PassingDataObject: nmdc:e99944a8767f4d87a78563aa4621a5b4 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452547 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-w9r3hd19 +INFO:root:legacy_id: gold:Gp0452636 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-w9r3hd19 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:47ccf15b0bff588636b8a488f343f457 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:5b78b0f864bfbd495ea9a4c245536406 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:baf245903ec64b7441f3ecaac848c69c +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452636 +INFO:root:found 3 records +INFO:root:record: nmdc:35ecc186fb465626c68b0599078fdb14, Read QC Activity for nmdc:mga076fg53 +INFO:root:PassingDataObject: nmdc:5d7591cc54b5a75f6ef8c01681cda321 +INFO:root:PassingDataObject: nmdc:3cb2f1b165f4bc09903f3f49921e5eba +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:45999ff56bd45c7f4594c8ce4cc3e4dc, Read QC Activity for nmdc:mga0a5y440 +INFO:root:PassingDataObject: nmdc:ac14a73bd1dade1a9acef81b397d15c2 +INFO:root:PassingDataObject: nmdc:64aee15ebf0653218d0cea0ab4123553 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:916a83fca0e0855024dc5bd1efb06a01, Read QC Activity for nmdc:mga0rv2r54 +INFO:root:PassingDataObject: nmdc:0fa4cb8f515eb5f3367dac6c8008bace +INFO:root:PassingDataObject: nmdc:0b931575b87b1723082a7fe78e2e07dc +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452636 +INFO:root:found 3 records +INFO:root:record: nmdc:35ecc186fb465626c68b0599078fdb14, ReadBased Analysis Activity for nmdc:mga076fg53 +INFO:root:PassingDataObject: nmdc:c857943038ecc8f59427784348241100 +INFO:root:PassingDataObject: nmdc:5e7bbbdc5099a060d8ca80f61b215eab +INFO:root:PassingDataObject: nmdc:5ebd3a9851ced77e985dfdead129dab3 +INFO:root:PassingDataObject: nmdc:07aaf46840f67bc6d8c43b1ce6a57900 +INFO:root:PassingDataObject: nmdc:75e0c1bacd31b9034076718ab30e95f4 +INFO:root:PassingDataObject: nmdc:a88930fba1e877ea37ca0647dd51cb72 +INFO:root:PassingDataObject: nmdc:db8b13c8e7101f0c1ccaea02dae3637b +INFO:root:PassingDataObject: nmdc:8b5817def0bb85b2d6e66d3be9bfbb4e +INFO:root:PassingDataObject: nmdc:8a19f2d02f60af5f91814b35a62327dd +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:916a83fca0e0855024dc5bd1efb06a01, ReadBased Analysis Activity for nmdc:mga0rv2r54 +INFO:root:PassingDataObject: nmdc:c28530fa17dfe848786204abc1979fd9 +INFO:root:PassingDataObject: nmdc:8a884ba7b5d8705ebc2fe19c7d103705 +INFO:root:PassingDataObject: nmdc:eac90b26d0fed0a39fa12a3b4026d43e +INFO:root:PassingDataObject: nmdc:ad58f0a9081267ac0ab688c6d9eb0650 +INFO:root:PassingDataObject: nmdc:f692a3168c80ab4ee51f6103d03f1ebc +INFO:root:PassingDataObject: nmdc:731bb99733b25b67f52bf0c6d22081b1 +INFO:root:PassingDataObject: nmdc:76fe3c39aa47e1bc041f7ab3e32131cd +INFO:root:PassingDataObject: nmdc:4e559ff708c43b2e2e337b83b11881f6 +INFO:root:PassingDataObject: nmdc:86d5926f1bb3a432b661e1848908018a +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:45999ff56bd45c7f4594c8ce4cc3e4dc, ReadBased Analysis Activity for nmdc:mga0a5y440 +INFO:root:PassingDataObject: nmdc:1a052f90aa39beb5a9b2ff59c27047f4 +INFO:root:PassingDataObject: nmdc:4b4a02f74befb3bd362f22e72a857358 +INFO:root:PassingDataObject: nmdc:895483cb0c2cd77790cc4b2eed78383b +INFO:root:PassingDataObject: nmdc:3cd9ed447db9c578b3a5d88a59a49d41 +INFO:root:PassingDataObject: nmdc:28ecff2ad7e6dee8bb024286cc8e0cd7 +INFO:root:PassingDataObject: nmdc:ebf7726a105896124b1975f71c2d46b5 +INFO:root:PassingDataObject: nmdc:a3964dd07d21e2d6a73e54e42640a802 +INFO:root:PassingDataObject: nmdc:61f87390cbaec8b0fc8f3399e8cc85e9 +INFO:root:PassingDataObject: nmdc:3439c90c73fb82c46121bed003726efe +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452636 +INFO:root:found 3 records +INFO:root:record: nmdc:35ecc186fb465626c68b0599078fdb14, Assembly Activity for nmdc:mga076fg53 +INFO:root:PassingDataObject: nmdc:25375ed276a5c612e22ae5ff81a75b51 +INFO:root:PassingDataObject: nmdc:2921b2dd082559d9f98e4e3565ff2af0 +INFO:root:PassingDataObject: nmdc:063c5b841af4b8e8b78b2648c2003768 +INFO:root:PassingDataObject: nmdc:7d032789eab3b57f91cee070abd82f2d +INFO:root:PassingDataObject: nmdc:8f871133e0fca16b1e6fef14eb05bf1a +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:45999ff56bd45c7f4594c8ce4cc3e4dc, Assembly Activity for nmdc:mga0a5y440 +INFO:root:PassingDataObject: nmdc:600564866645ea56600632263de564e0 +INFO:root:PassingDataObject: nmdc:3e359fb8861ecab7562e01e44a9ef1b2 +INFO:root:PassingDataObject: nmdc:15fecb5ca96c4b8129951b1b6f515226 +INFO:root:PassingDataObject: nmdc:e0e2400442d727a212534a1fcec40310 +INFO:root:PassingDataObject: nmdc:bb01282b1777b23cfa2384f65ca3bb03 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:916a83fca0e0855024dc5bd1efb06a01, Assembly Activity for nmdc:mga0rv2r54 +INFO:root:PassingDataObject: nmdc:12689fb081567fd267354e2f45079c21 +INFO:root:PassingDataObject: nmdc:4244f582cb8f3f9abbfdd086d006ed2f +INFO:root:PassingDataObject: nmdc:52031838b7aa3d21eee9dcbec1ad73fc +INFO:root:PassingDataObject: nmdc:27cd7e50b6fb2420da9b68257bc62aed +INFO:root:PassingDataObject: nmdc:8c2d07b5d704043716ef1317ce52e943 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452636 +INFO:root:found 3 records +INFO:root:record: nmdc:35ecc186fb465626c68b0599078fdb14, Annotation Activity for nmdc:mga076fg53 +INFO:root:PassingDataObject: nmdc:8465b6df9b02aae7893b46c91886c599 +INFO:root:PassingDataObject: nmdc:e8defe0a11cedf870d4d2088dce8e472 +INFO:root:PassingDataObject: nmdc:f0de4e642fc9c2f228ff397382a4c657 +INFO:root:PassingDataObject: nmdc:f0b216992b9bdbc29696b06a849c71be +INFO:root:PassingDataObject: nmdc:b305c7fa1907597ce3aa04f5b0e7d74a +INFO:root:PassingDataObject: nmdc:104bd925c14e3ec83ff16faae1aade3b +INFO:root:PassingDataObject: nmdc:b7f346fc4ba8fe7b753c0bd32a8e4389 +INFO:root:PassingDataObject: nmdc:6b799465378e94fbc30c9568f26a451b +INFO:root:PassingDataObject: nmdc:421b9a882f3465ec8710f8d9cd3b66f3 +INFO:root:PassingDataObject: nmdc:9de155a55438452449c79bd833c49f02 +INFO:root:PassingDataObject: nmdc:a8b5adf7fb38f4da922e763d47d72289 +INFO:root:PassingDataObject: nmdc:99426c3c5621799b8f430a11efd521d0 +INFO:root:PassingDataObject: nmdc:c0b24af7cb068f1d62d640cca127a9f7 +INFO:root:PassingDataObject: nmdc:80e073c8701fdc87bf5449c243b3ee20 +INFO:root:PassingDataObject: nmdc:4cdd41d0bf0f67c89f6e8af32d4b95a3 +INFO:root:PassingDataObject: nmdc:c8b4a1c990f395fe838ff7b996bf2b26 +INFO:root:PassingDataObject: nmdc:726ed5096bb83ec811315789e6b4a1c1 +INFO:root:PassingDataObject: nmdc:d862f7c0bcb3f8839d582be7b1bc0881 +INFO:root:PassingDataObject: nmdc:5800b6ce52ad2f6b380f4df2a2915cd4 +INFO:root:PassingDataObject: nmdc:c56995d32c2f87d1b97f7bfdea28e420 +INFO:root:PassingDataObject: nmdc:cdb16091a05bb088019b65a3445ac10e +INFO:root:PassingDataObject: nmdc:eb0381c0137f3bde0aad0995284ad944 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:45999ff56bd45c7f4594c8ce4cc3e4dc, Annotation Activity for nmdc:mga0a5y440 +INFO:root:PassingDataObject: nmdc:61b494e4e91bce8d5c6ba69c8cf07f5d +INFO:root:PassingDataObject: nmdc:dd6fb29a61d4050de94edc1ff7cf73cf +INFO:root:PassingDataObject: nmdc:1bf5812836bf46d4c778ed39167e717f +INFO:root:PassingDataObject: nmdc:95f85a249d0b394a6c5c965c9d439412 +INFO:root:PassingDataObject: nmdc:51c939500cb3b25d3756a75a7efbe60a +INFO:root:PassingDataObject: nmdc:d01f3219e943c39609575a25d24e41a8 +INFO:root:PassingDataObject: nmdc:fc8ea8c693c6737389a783d24b57394c +INFO:root:PassingDataObject: nmdc:3ca009db98f28fb4eba16743e90d3ba3 +INFO:root:PassingDataObject: nmdc:b4b5a29d1a244f1932eb3feec7090575 +INFO:root:PassingDataObject: nmdc:4acaeec601f2d242ab7214b0fe0fed9b +INFO:root:PassingDataObject: nmdc:c9d0ba6822ccf3520e45183d113dfd76 +INFO:root:PassingDataObject: nmdc:ea6a724658012dc0ff10d602966ff2fc +INFO:root:PassingDataObject: nmdc:eaaf223d8ac8e4513af5dd20a446488b +INFO:root:PassingDataObject: nmdc:3f077a1a327b31f592639aa312b2ee2c +INFO:root:PassingDataObject: nmdc:2da22961e74e6030526f76018402c74a +INFO:root:PassingDataObject: nmdc:bc8e8e15c74899528607dcb65b3aec39 +INFO:root:PassingDataObject: nmdc:aac20956e7e4edad82d34b46c571babe +INFO:root:PassingDataObject: nmdc:49139323389bfda7902154f282ee461a +INFO:root:PassingDataObject: nmdc:af7a2f95b23f92d11fc74d23403d0152 +INFO:root:PassingDataObject: nmdc:a60638e813332b2f0663f9c2f2e986e3 +INFO:root:PassingDataObject: nmdc:fb3acefb08c35bbac99db8cab4ab8381 +INFO:root:PassingDataObject: nmdc:e6401a915fed6963c9da5e086a77c1fb +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:916a83fca0e0855024dc5bd1efb06a01, Annotation Activity for nmdc:mga0rv2r54 +INFO:root:PassingDataObject: nmdc:5c53b0e83e5da76c80f0f172341dcc1b +INFO:root:PassingDataObject: nmdc:08ae490e4ec81e6f1cc46bbb18a5ade1 +INFO:root:PassingDataObject: nmdc:d54b399c2ae892fd383e745a459d6ea3 +INFO:root:PassingDataObject: nmdc:7199150efaa63c1a72340bf9de9e95a1 +INFO:root:PassingDataObject: nmdc:b9c55dd4f54683a124b107fd9617de86 +INFO:root:PassingDataObject: nmdc:8605ed95421db890e1438386d5d5ae0d +INFO:root:PassingDataObject: nmdc:01d9d0411f89b2ee2577d1ec6f545204 +INFO:root:PassingDataObject: nmdc:859dd860b26c1b932b0cb06a929c9395 +INFO:root:PassingDataObject: nmdc:03b38fc448feb7bc39ebeb2fc54da6c8 +INFO:root:PassingDataObject: nmdc:4e00d872594bfab7265e5a541a4fb56a +INFO:root:PassingDataObject: nmdc:ee80705c2500f4c072c05d29dc748964 +INFO:root:PassingDataObject: nmdc:8be075421498146317a703e50c597306 +INFO:root:PassingDataObject: nmdc:335ecdaea0cdb07169fe73a5a40544ed +INFO:root:PassingDataObject: nmdc:13ae916587851ca15c4fb2a755e2c16b +INFO:root:PassingDataObject: nmdc:ee766e72435bb94e7ee32c9f41fb55c8 +INFO:root:PassingDataObject: nmdc:b10f98b4789346ba3db9030c4caaf7e6 +INFO:root:PassingDataObject: nmdc:cb85c0270b10a8a7203c6dd012dfa497 +INFO:root:PassingDataObject: nmdc:9a5aabd5ec1195b88ebe4c1aad18bc56 +INFO:root:PassingDataObject: nmdc:9d4b3a28e07fb54a3ac1079ba133582d +INFO:root:PassingDataObject: nmdc:45070706223b89c5fe9f1bd197243420 +INFO:root:PassingDataObject: nmdc:6d1e35ad5d04d13a87e207d35ab3b2fe +INFO:root:PassingDataObject: nmdc:f19701ad0b4bd87a410d8045feb33cd2 +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 3 +INFO:root:set_name: mags_activity_set for gold:Gp0452636 +INFO:root:found 3 records +INFO:root:record: nmdc:916a83fca0e0855024dc5bd1efb06a01, MAGs Analysis Activity for nmdc:mga0rv2r54 +INFO:root:PassingDataObject: nmdc:3fca0a286ca51d46f3086dae9e711b91 +INFO:root:PassingDataObject: nmdc:6459fa19153ccb5fcad779237b036be2 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:35ecc186fb465626c68b0599078fdb14, MAGs Analysis Activity for nmdc:mga076fg53 +INFO:root:PassingDataObject: nmdc:5b825f2d64c366c6425f5b2c1b10964f +INFO:root:PassingDataObject: nmdc:ddaf420fd99f31859dfa05988c414e2d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:45999ff56bd45c7f4594c8ce4cc3e4dc, MAGs Analysis Activity for nmdc:mga0a5y440 +INFO:root:PassingDataObject: nmdc:8f94da6c62edc56a25352bd5ffa881f3 +INFO:root:PassingDataObject: nmdc:fc93db6087a27e0dd9c5b9d0235e4969 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452636 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-00wrjs90 +INFO:root:legacy_id: gold:Gp0452544 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-00wrjs90 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:64f288a541b1c9eb56d8e83aef6f381e +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:90d1d613541efa15d23eaff2e6a30889 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452544 +INFO:root:found 2 records +INFO:root:record: nmdc:23f566e73d1e6095cfe49ff57bb2ad4c, Read QC Activity for nmdc:mga0rr1r54 +INFO:root:PassingDataObject: nmdc:9b50061675e419bb8a238dddc961d592 +INFO:root:PassingDataObject: nmdc:310f71c19f74c4683e8e109ea33ac129 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:53741f195cd67218562374f91e88052c, Read QC Activity for nmdc:mga0bg1t60 +INFO:root:PassingDataObject: nmdc:7bd4b5fc04f6e9002792dac03acc4b66 +INFO:root:PassingDataObject: nmdc:f6a49b146382fb80928974d4ac3c3f12 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452544 +INFO:root:found 2 records +INFO:root:record: nmdc:53741f195cd67218562374f91e88052c, ReadBased Analysis Activity for nmdc:mga0bg1t60 +INFO:root:PassingDataObject: nmdc:a8adf4ed61eaee49b0f548d2f295b6b9 +INFO:root:PassingDataObject: nmdc:150ffb4182846fdc134972e77fe8dec2 +INFO:root:PassingDataObject: nmdc:82a6790db75f4539ea3425f813df950a +INFO:root:PassingDataObject: nmdc:4aa47ce897465af6d02d61f290967b46 +INFO:root:PassingDataObject: nmdc:54834e458c3fb2e69470d15acf8f0209 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:53741f195cd67218562374f91e88052c +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:53741f195cd67218562374f91e88052c +ERROR:root:FailedDataObject: nmdc:7c65241679fe0fb2ac1ea8673c55ee8e, +ERROR:root:FailedDataObject: nmdc:4599810cd4b896133210890524fed972, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:53741f195cd67218562374f91e88052c, ReadBased Analysis Activity for nmdc:mga0bg1t60 +INFO:root:record: nmdc:23f566e73d1e6095cfe49ff57bb2ad4c, ReadBased Analysis Activity for nmdc:mga0rr1r54 +INFO:root:PassingDataObject: nmdc:74a24a99f66db9489c46d6509cf65b9e +INFO:root:PassingDataObject: nmdc:65edc3540af8e60eb92ae4a3b78980d9 +INFO:root:PassingDataObject: nmdc:d09e9db97605f210e09bcdab8ee608ad +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:23f566e73d1e6095cfe49ff57bb2ad4c +ERROR:root:FailedDataObject: nmdc:16b7329b2d3a666abf5bb57703b96da9, +ERROR:root:FailedDataObject: nmdc:ab6db74179da8fb9acc2ab6afe7c69c6, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:23f566e73d1e6095cfe49ff57bb2ad4c +ERROR:root:FailedDataObject: nmdc:87740c5500e836d98ff3618c6602b744, +ERROR:root:FailedDataObject: nmdc:b1f0fc5e8f9a108944af7552b24aa9eb, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:23f566e73d1e6095cfe49ff57bb2ad4c, ReadBased Analysis Activity for nmdc:mga0rr1r54 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452544 +INFO:root:found 2 records +INFO:root:record: nmdc:23f566e73d1e6095cfe49ff57bb2ad4c, Assembly Activity for nmdc:mga0rr1r54 +INFO:root:PassingDataObject: nmdc:726129680a778216ff6458142075edbe +INFO:root:PassingDataObject: nmdc:859b94a3fb3ecfad0e4af357853caa52 +INFO:root:PassingDataObject: nmdc:42e962292ac1fce1e343e1bf657e0b7a +INFO:root:PassingDataObject: nmdc:fdd19765d189faf12d137a4b5469f00f +INFO:root:PassingDataObject: nmdc:70f6d661ab1d5ee2eef22c7e9ef7f40a +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:53741f195cd67218562374f91e88052c, Assembly Activity for nmdc:mga0bg1t60 +INFO:root:PassingDataObject: nmdc:9cecf0c7c7e6208c76209cc620f4443f +INFO:root:PassingDataObject: nmdc:00cb652ca5195471f8d6b0fab02352cf +INFO:root:PassingDataObject: nmdc:b56617745786ae4b0ac21c0a30de333f +INFO:root:PassingDataObject: nmdc:8dda1008bbb58646fd3b953ad123cf84 +INFO:root:PassingDataObject: nmdc:78722a645c2dde136cf27598db0778c8 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452544 +INFO:root:found 2 records +INFO:root:record: nmdc:23f566e73d1e6095cfe49ff57bb2ad4c, Annotation Activity for nmdc:mga0rr1r54 +INFO:root:PassingDataObject: nmdc:4f04f6a7129f5f527c4a57b311c2dc87 +INFO:root:PassingDataObject: nmdc:23ee6acd4790d1340d5fd68a65255b84 +INFO:root:PassingDataObject: nmdc:348cded4a1a6f828d65b63c37e56ad01 +INFO:root:PassingDataObject: nmdc:cab885df329af9226aece720cfe2cec4 +INFO:root:PassingDataObject: nmdc:55b0f995dfc0f7f480be2d33512da9af +INFO:root:PassingDataObject: nmdc:4f33d0ee9d3047b94c91666767bb0bb5 +INFO:root:PassingDataObject: nmdc:4857f188d433aa77917e72e010572d30 +INFO:root:PassingDataObject: nmdc:70754b7a001cd3c5c11c424d686edd3a +INFO:root:PassingDataObject: nmdc:cc88264dd3b949b03e7a0850807f7788 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:23f566e73d1e6095cfe49ff57bb2ad4c +ERROR:root:FailedDataObject: nmdc:f55acfae87a11c4854b76ddd5159b262, +ERROR:root:FailedDataObject: nmdc:c713a6a14b8dd9189b715ed7836202e9, +ERROR:root:FailedDataObject: nmdc:acfcc60ca9068afe7d4a743be2f8045a, +ERROR:root:FailedDataObject: nmdc:d3c2bb553afb9c635655e7bc084a3337, +ERROR:root:FailedDataObject: nmdc:38c53fa02ce3e0db6bbbbbe065197d8f, +ERROR:root:FailedDataObject: nmdc:8bcf492012bc72f1b496d7b4101fddc4, +ERROR:root:FailedDataObject: nmdc:898257b91ab798264894aece14623159, +ERROR:root:FailedDataObject: nmdc:749447e29639649687ca31fac4df0290, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:23f566e73d1e6095cfe49ff57bb2ad4c, Annotation Activity for nmdc:mga0rr1r54 +INFO:root:record: nmdc:53741f195cd67218562374f91e88052c, Annotation Activity for nmdc:mga0bg1t60 +INFO:root:PassingDataObject: nmdc:e3d510e832db4a54fa9fc752c8498b55 +INFO:root:PassingDataObject: nmdc:1b6343c8d1260a86368f2af5717f5474 +INFO:root:PassingDataObject: nmdc:2a7a5e30d5d69dc2481330999e3c929a +INFO:root:PassingDataObject: nmdc:52b1b3066d69accb9eede272a5b03d0d +INFO:root:PassingDataObject: nmdc:57c448634bbac342cca96421b5a9ea88 +INFO:root:PassingDataObject: nmdc:299be82eb3bb91ba3e1fdbabe975006f +INFO:root:PassingDataObject: nmdc:2425394bcc9b07668941e510bc543b9c +INFO:root:PassingDataObject: nmdc:4fa244bc902781d720943d717fe7349f +INFO:root:PassingDataObject: nmdc:7fdbd1ed515376746e04e9fecd1d0b44 +INFO:root:PassingDataObject: nmdc:5915f2c4de000a0ab1961dc4e66f82c3 +INFO:root:PassingDataObject: nmdc:90ae39cb9defdfa4e94e423cd42a9a4f +INFO:root:PassingDataObject: nmdc:a48274f8d17292ad54b2bf1fb16c95ea +INFO:root:PassingDataObject: nmdc:cac501244f38ff986d41a4f187754eeb +INFO:root:PassingDataObject: nmdc:01c905ec93a376365fc5feb94b99314c +INFO:root:PassingDataObject: nmdc:70bb428b507094da6889ebcb9d13a30a +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:53741f195cd67218562374f91e88052c +ERROR:root:FailedDataObject: nmdc:f73bf4c6f116a7865f7ba5d9f576bdee, +ERROR:root:failing_data_objects: 16 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:53741f195cd67218562374f91e88052c, Annotation Activity for nmdc:mga0bg1t60 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452544 +INFO:root:found 2 records +INFO:root:record: nmdc:23f566e73d1e6095cfe49ff57bb2ad4c, MAGs Analysis Activity for nmdc:mga0rr1r54 +INFO:root:PassingDataObject: nmdc:b78ed87fd82cc6b6d80e5fdf58454db9 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:23f566e73d1e6095cfe49ff57bb2ad4c +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:23f566e73d1e6095cfe49ff57bb2ad4c, MAGs Analysis Activity for nmdc:mga0rr1r54 +INFO:root:record: nmdc:53741f195cd67218562374f91e88052c, MAGs Analysis Activity for nmdc:mga0bg1t60 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:53741f195cd67218562374f91e88052c +ERROR:root:FailedDataObject: nmdc:4c5bb4ba505d81b87e820e9e914f3e13, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:53741f195cd67218562374f91e88052c, MAGs Analysis Activity for nmdc:mga0bg1t60 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452544 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-3xc6vt92 +INFO:root:legacy_id: gold:Gp0452652 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-3xc6vt92 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d9a31bbde1ce4d47cdc4cda5fc5c280d +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:54c78acb9faacb00de8baa3d2d29d1f5 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:5b14e76f800960f57ccf14a0e382d7d0 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a6854aa2fb0f776422001f9ba4df7931 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452652 +INFO:root:found 4 records +INFO:root:record: nmdc:93f47f83d0f0bb91cb33c02150ca7239, Read QC Activity for nmdc:mga0eejb26 +INFO:root:PassingDataObject: nmdc:e135c311ae86a76bad01f03d35dd40e5 +INFO:root:PassingDataObject: nmdc:9dfba8da94f2b90cd12d17c3c9ff250f +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:445d5d6b38895ce163c69ede7a1dbcc9, Read QC Activity for nmdc:mga06g4356 +INFO:root:PassingDataObject: nmdc:815bb124c55c2691ca0370eec56c72c9 +INFO:root:PassingDataObject: nmdc:c58137bcfa697625d12287d6d62c387b +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:29fdd0fb4c501e6d363bf42f4483159c, Read QC Activity for nmdc:mga0402025 +INFO:root:PassingDataObject: nmdc:c97a0e8e5c36db23debdd52c8137bb70 +INFO:root:PassingDataObject: nmdc:97734f7ddd779314eab46a3bb20b1c52 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:66d71934a44d6a30fac861162d9204be, Read QC Activity for nmdc:mga0fd0w76 +INFO:root:PassingDataObject: nmdc:11d80cbbf9ea84b4ba52b2c684ea47ed +INFO:root:PassingDataObject: nmdc:f7db34463e9197f1a02298a6a2cb19fe +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452652 +INFO:root:found 4 records +INFO:root:record: nmdc:445d5d6b38895ce163c69ede7a1dbcc9, ReadBased Analysis Activity for nmdc:mga06g4356 +INFO:root:PassingDataObject: nmdc:f4559d01c13535a84679a1fe20b356cd +INFO:root:PassingDataObject: nmdc:9cca76c5cbe1b162f72edf663af27d87 +INFO:root:PassingDataObject: nmdc:536ee52652743276bc658f423daab803 +INFO:root:PassingDataObject: nmdc:50023adca59bc2c075fc862cfd32aefe +INFO:root:PassingDataObject: nmdc:2010ccb6bcd5c3f210448a54e5ce04ab +INFO:root:PassingDataObject: nmdc:fe251160f33767459860764781f68054 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:445d5d6b38895ce163c69ede7a1dbcc9 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:445d5d6b38895ce163c69ede7a1dbcc9 +ERROR:root:FailedDataObject: nmdc:52ae7b6d344dcda18244f2676e9c2c1a, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:445d5d6b38895ce163c69ede7a1dbcc9, ReadBased Analysis Activity for nmdc:mga06g4356 +INFO:root:record: nmdc:93f47f83d0f0bb91cb33c02150ca7239, ReadBased Analysis Activity for nmdc:mga0eejb26 +INFO:root:PassingDataObject: nmdc:a6778c6acd7737c37c9c0326aa66bde1 +INFO:root:PassingDataObject: nmdc:05ddbfc341e476d94fb40c1cd77e4a8b +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:93f47f83d0f0bb91cb33c02150ca7239 +ERROR:root:FailedDataObject: nmdc:9c31d2d004c3285087f86c1d3f367eaf, +ERROR:root:FailedDataObject: nmdc:7c3a611007112745b579ac2ef9b13036, +ERROR:root:FailedDataObject: nmdc:0f26c88483979bb04eed18184899da20, +ERROR:root:FailedDataObject: nmdc:88385cc4bd6403831aedeea2b56b9703, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:93f47f83d0f0bb91cb33c02150ca7239 +ERROR:root:FailedDataObject: nmdc:d8fef760716ab424dd36c51716eb20aa, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:93f47f83d0f0bb91cb33c02150ca7239, ReadBased Analysis Activity for nmdc:mga0eejb26 +INFO:root:record: nmdc:66d71934a44d6a30fac861162d9204be, ReadBased Analysis Activity for nmdc:mga0fd0w76 +INFO:root:PassingDataObject: nmdc:e10242a05a38355a7d4f79bbbea80a9a +INFO:root:PassingDataObject: nmdc:d495163bacb75247a71b85201745ff3a +INFO:root:PassingDataObject: nmdc:262d21e366e3325ffd8635d0555942af +INFO:root:PassingDataObject: nmdc:3d745614491255bf76d0653492add4fb +INFO:root:PassingDataObject: nmdc:7de8f9c8db0912bb198f0da4968e2e58 +INFO:root:PassingDataObject: nmdc:a182e070a68f59b81c1ae8841dbf70d2 +INFO:root:PassingDataObject: nmdc:f2990f82409302d4c5f659d72839a536 +INFO:root:PassingDataObject: nmdc:18cff6d439948ec9090489bda093214a +INFO:root:PassingDataObject: nmdc:13b84d14aa128262a78e91957a60416c +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:29fdd0fb4c501e6d363bf42f4483159c, ReadBased Analysis Activity for nmdc:mga0402025 +INFO:root:PassingDataObject: nmdc:0c3bf24c59948a25763b097c948f3d16 +INFO:root:PassingDataObject: nmdc:b8de986223c5b2b22b3d5b061793dbe7 +INFO:root:PassingDataObject: nmdc:c268c5b2c100728f49b232f18ce65ee8 +INFO:root:PassingDataObject: nmdc:0e0311a248d89c0af548acac24787d5c +INFO:root:PassingDataObject: nmdc:351b65c578204cbea0efb63bcca499e4 +INFO:root:PassingDataObject: nmdc:633e527c4e7da012fbfb4834dbc02152 +INFO:root:PassingDataObject: nmdc:1ec3a8e67846d3c0ecdabfc736f269c1 +INFO:root:PassingDataObject: nmdc:53d6905b05b9f0e7a054ab32d297ec68 +INFO:root:PassingDataObject: nmdc:e1899f20dbf8017d78a65f10e7ffbd21 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452652 +INFO:root:found 4 records +INFO:root:record: nmdc:445d5d6b38895ce163c69ede7a1dbcc9, Assembly Activity for nmdc:mga06g4356 +INFO:root:PassingDataObject: nmdc:aa4842a552f455cf75ffc9bbe46f653e +INFO:root:PassingDataObject: nmdc:6daaa7a46bc89b797b3c18e26e793496 +INFO:root:PassingDataObject: nmdc:9391c126a647c10ed35f2144861efa0b +INFO:root:PassingDataObject: nmdc:dae87a6c60efefdb77e597df6f3ded14 +INFO:root:PassingDataObject: nmdc:82ed4f79cb590f5a678e57ecfb4a51c9 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:66d71934a44d6a30fac861162d9204be, Assembly Activity for nmdc:mga0fd0w76 +INFO:root:PassingDataObject: nmdc:838671b9b3d35f89bb633ebed06fa597 +INFO:root:PassingDataObject: nmdc:919c8d6a4782c5fca7e82c67e1f53d9d +INFO:root:PassingDataObject: nmdc:933133f56b6d99a7e086e8bbb9d3d83a +INFO:root:PassingDataObject: nmdc:398e3f726ba93005a81555f5fb4c4790 +INFO:root:PassingDataObject: nmdc:94cf57f413206a5f282071046aa5b28c +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:93f47f83d0f0bb91cb33c02150ca7239, Assembly Activity for nmdc:mga0eejb26 +INFO:root:PassingDataObject: nmdc:91aa9ea6aba457c016a7b160a9cf6b55 +INFO:root:PassingDataObject: nmdc:d5c85efcbf119f6ce2739619ab12fb42 +INFO:root:PassingDataObject: nmdc:079706c1846f32c217b78ba6e975b3ec +INFO:root:PassingDataObject: nmdc:e040caa28ab2c4a78e941e4e896bc604 +INFO:root:PassingDataObject: nmdc:ff84788857f106b22440d6678e1733c5 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:29fdd0fb4c501e6d363bf42f4483159c, Assembly Activity for nmdc:mga0402025 +INFO:root:PassingDataObject: nmdc:4ca14652d9855b6e584c73309cd3bc3a +INFO:root:PassingDataObject: nmdc:ec6c9a316666d92837ea9289b89b9590 +INFO:root:PassingDataObject: nmdc:dfa6196726c992c92243b9d7ad97d789 +INFO:root:PassingDataObject: nmdc:32c09ffd9426028af5cdab31759ab58c +INFO:root:PassingDataObject: nmdc:ad7bdf595111d928acb1b278c8a0a944 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452652 +INFO:root:found 4 records +INFO:root:record: nmdc:93f47f83d0f0bb91cb33c02150ca7239, Annotation Activity for nmdc:mga0eejb26 +INFO:root:PassingDataObject: nmdc:72e33554a673d51c7a64a181723fb11e +INFO:root:PassingDataObject: nmdc:e46a5e9c7c3ac2ff21369a96a0069b12 +INFO:root:PassingDataObject: nmdc:722a089d6215c1f0fb200b53b7de4ff1 +INFO:root:PassingDataObject: nmdc:ab87b539d73c12e4396fa1fa7540a3dd +INFO:root:PassingDataObject: nmdc:841395427f7276e24e82389c65967ce7 +INFO:root:PassingDataObject: nmdc:9a59c6ae73c7315bcb42f95202a56b3b +INFO:root:PassingDataObject: nmdc:a341749bda8dcd75b644014abde18a21 +INFO:root:PassingDataObject: nmdc:350a2699ab237389467d4d32ee09d7b5 +INFO:root:PassingDataObject: nmdc:36c8df32878cc8c0f1f3bb4fb2ab08bc +INFO:root:PassingDataObject: nmdc:55897d1265fb9510dbbabd068e805250 +INFO:root:PassingDataObject: nmdc:2179f4eb5eb6f551e72899a6e710d930 +INFO:root:PassingDataObject: nmdc:cca01d0894fbc1e1a4eb8faf6591c1c3 +INFO:root:PassingDataObject: nmdc:2500d9fb75d7f3edaedb71d76aefef39 +INFO:root:PassingDataObject: nmdc:88525f9574fd5e8d0af5a5a307e50837 +INFO:root:PassingDataObject: nmdc:9a3446aae561f76a5aa9cffc52e00461 +INFO:root:PassingDataObject: nmdc:8f91e843cf1992e26c0f862e7a554a26 +INFO:root:PassingDataObject: nmdc:f47d3ede42110a2d3616e8fe723edb8a +INFO:root:PassingDataObject: nmdc:131a7c92ec3060aa18c4592d537cb8a0 +INFO:root:PassingDataObject: nmdc:3e04c4a54b8ae1fc4c010229e15e407b +INFO:root:PassingDataObject: nmdc:92cbb89cf6b597a0de00eb471654387e +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:93f47f83d0f0bb91cb33c02150ca7239 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:93f47f83d0f0bb91cb33c02150ca7239, Annotation Activity for nmdc:mga0eejb26 +INFO:root:record: nmdc:29fdd0fb4c501e6d363bf42f4483159c, Annotation Activity for nmdc:mga0402025 +INFO:root:PassingDataObject: nmdc:ba1531be8f10a7addef12bea9fe9f76f +INFO:root:PassingDataObject: nmdc:b8323ceb0203119933c21d1f640d6335 +INFO:root:PassingDataObject: nmdc:804f1dcf7ebc0b69003918295bb99b8a +INFO:root:PassingDataObject: nmdc:e3743bec4650ce575d6eefdce5fee264 +INFO:root:PassingDataObject: nmdc:9a655f7e0fb49e48ce03d4b4fc0990cf +INFO:root:PassingDataObject: nmdc:3278c65e866ac7e4cd0030adefbe0e2e +INFO:root:PassingDataObject: nmdc:cb73b588b7c63d13507fffa4fe76a8b2 +INFO:root:PassingDataObject: nmdc:91fb30460024161e1eb38f83b03dbe92 +INFO:root:PassingDataObject: nmdc:bbea5118beacdc7b6952b1c08624a28d +INFO:root:PassingDataObject: nmdc:e90beb2f1a22be78346c4a4b67d11a71 +INFO:root:PassingDataObject: nmdc:67b0ad1c3b7100c2c963e631fde47353 +INFO:root:PassingDataObject: nmdc:a22238e990c5ba3e41edf12f517dfe05 +INFO:root:PassingDataObject: nmdc:89800506f59afaa38d4366abf02acd7b +INFO:root:PassingDataObject: nmdc:a9537354c5bea5b2e94b94ac49eb5d24 +INFO:root:PassingDataObject: nmdc:2cf21e83c6c1f9a7a5df96118481ebf7 +INFO:root:PassingDataObject: nmdc:3fc0fa8dbfe3ccba3060d78de360c89d +INFO:root:PassingDataObject: nmdc:aeb4c28ed6a78a2375b389c389cac892 +INFO:root:PassingDataObject: nmdc:b6b6b3427c0560626c82b291a5e00ec4 +INFO:root:PassingDataObject: nmdc:cf3b556b0495406a5683a42508791309 +INFO:root:PassingDataObject: nmdc:31baedc2af38e50e88865d015a1c5ae3 +INFO:root:PassingDataObject: nmdc:9271c5fab4fc1e2d922a96144c0b8b29 +INFO:root:PassingDataObject: nmdc:04a9a089ba772e00292082a283cead08 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:445d5d6b38895ce163c69ede7a1dbcc9, Annotation Activity for nmdc:mga06g4356 +INFO:root:PassingDataObject: nmdc:735c2f6e6654b72e56fcabcec2759e5e +INFO:root:PassingDataObject: nmdc:2ec4302736e3b4eea77046a03516680c +INFO:root:PassingDataObject: nmdc:9dc5caaf1de3da3b2a0398140da887d9 +INFO:root:PassingDataObject: nmdc:63bef68803c0ed4968de9894998bfea2 +INFO:root:PassingDataObject: nmdc:06275e28ca3f93a8ca6a72a19236759b +INFO:root:PassingDataObject: nmdc:724caa935dbd7b28c010f6e55ac05dab +INFO:root:PassingDataObject: nmdc:b08ad32cdd5852d18c47a74bfe259817 +INFO:root:PassingDataObject: nmdc:d0ae35db8749870ac412c7b8087dec46 +INFO:root:PassingDataObject: nmdc:adf88d0284c1c2ab1927b3d79cd338a0 +INFO:root:PassingDataObject: nmdc:0f600cc42d664499dbdb4d092c1b6556 +INFO:root:PassingDataObject: nmdc:8ae9c9a61e597c2180b722902dcaec16 +INFO:root:PassingDataObject: nmdc:60503b75cfbc807a1c24289de62dc523 +INFO:root:PassingDataObject: nmdc:e47f45c80c0d9f11b5ebe57d6e4995db +INFO:root:PassingDataObject: nmdc:a110dd58fceb8eae87341c5e608b9ecf +INFO:root:PassingDataObject: nmdc:ab9970209c88869b04ba3b1de3752028 +INFO:root:PassingDataObject: nmdc:8920a9d11cdb6ca51e540c98874d1c2d +INFO:root:PassingDataObject: nmdc:c139c4c0ff2f5597586bff3932aaad90 +INFO:root:PassingDataObject: nmdc:08751d4ce6c472cf5692d9ed347eb007 +INFO:root:PassingDataObject: nmdc:f7d46d03110fb7d0276e909f580c5144 +INFO:root:PassingDataObject: nmdc:f4c9c664a460074d93b9ce7a62c46688 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:445d5d6b38895ce163c69ede7a1dbcc9 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:445d5d6b38895ce163c69ede7a1dbcc9, Annotation Activity for nmdc:mga06g4356 +INFO:root:record: nmdc:66d71934a44d6a30fac861162d9204be, Annotation Activity for nmdc:mga0fd0w76 +INFO:root:PassingDataObject: nmdc:471119baec6080b557693d4a625cb356 +INFO:root:PassingDataObject: nmdc:b95be844337472b7e6358985635c605e +INFO:root:PassingDataObject: nmdc:5ed8a76663db8af583a0741eb3ca3e7a +INFO:root:PassingDataObject: nmdc:0c64cbc86e43b3123f1a5a27822232b1 +INFO:root:PassingDataObject: nmdc:53dfe092115b7d086cf37b86eca78fb9 +INFO:root:PassingDataObject: nmdc:d696da5464b739cf67bb79cf6f682ac7 +INFO:root:PassingDataObject: nmdc:740653bad0e4dae6009f9c6f6acd743d +INFO:root:PassingDataObject: nmdc:76268d3576e12e2111f5a5ee0cf872fe +INFO:root:PassingDataObject: nmdc:ff15dc8d1be632133a15f0515c1ba608 +INFO:root:PassingDataObject: nmdc:c2516c858e92c4adcbb4a84f725282e0 +INFO:root:PassingDataObject: nmdc:9f68ee05bded1c07cbc7332afc05bf3f +INFO:root:PassingDataObject: nmdc:534723c3d122961beaab4da5c57227bd +INFO:root:PassingDataObject: nmdc:64b9b90c876bb415c3d68f01236b709f +INFO:root:PassingDataObject: nmdc:a00b16864aebe03f900564fca414a6a3 +INFO:root:PassingDataObject: nmdc:db87db22845cbad299e1621382b318bb +INFO:root:PassingDataObject: nmdc:14786e16af0a68d2870fd905c5915811 +INFO:root:PassingDataObject: nmdc:f2b6712ec22e8b6710f18e5c18fa401a +INFO:root:PassingDataObject: nmdc:44207efade6208188ef3e898a7141446 +INFO:root:PassingDataObject: nmdc:3bdd8c4f384fdcf3e510531ef7800ad0 +INFO:root:PassingDataObject: nmdc:8bff2fc058f24ae04387d9114380e47b +INFO:root:PassingDataObject: nmdc:ce00a36e029e8d15fd41c4326ec6c1c0 +INFO:root:PassingDataObject: nmdc:5f4b84d95afde03a660a0f85dd8c0d6f +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452652 +INFO:root:found 4 records +INFO:root:record: nmdc:93f47f83d0f0bb91cb33c02150ca7239, MAGs Analysis Activity for nmdc:mga0eejb26 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:93f47f83d0f0bb91cb33c02150ca7239 +ERROR:root:FailedDataObject: nmdc:f7ff83f3a250eacd89e749062eb51398, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:93f47f83d0f0bb91cb33c02150ca7239, MAGs Analysis Activity for nmdc:mga0eejb26 +INFO:root:record: nmdc:445d5d6b38895ce163c69ede7a1dbcc9, MAGs Analysis Activity for nmdc:mga06g4356 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:445d5d6b38895ce163c69ede7a1dbcc9 +ERROR:root:FailedDataObject: nmdc:3dce587f19451af25ceff4e51fb542ae, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:445d5d6b38895ce163c69ede7a1dbcc9, MAGs Analysis Activity for nmdc:mga06g4356 +INFO:root:record: nmdc:29fdd0fb4c501e6d363bf42f4483159c, MAGs Analysis Activity for nmdc:mga0402025 +INFO:root:PassingDataObject: nmdc:621ce6ef43d4dadd8919167297d78947 +INFO:root:PassingDataObject: nmdc:d8cd6e382e09e4e319ea072bffd9cd8d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:66d71934a44d6a30fac861162d9204be, MAGs Analysis Activity for nmdc:mga0fd0w76 +INFO:root:PassingDataObject: nmdc:205ff25d32c5df0113141751d54db8c6 +INFO:root:PassingDataObject: nmdc:2d4156bd5319b88ec2381a5a10f15aaa +INFO:root:passing_data_objects: 2 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:PassingRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452652 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-tk58tf31 +INFO:root:legacy_id: gold:Gp0452654 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-tk58tf31 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:300679ea9c6c797128bf9ec0ce4b9dbb +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452654 +INFO:root:found 1 records +INFO:root:record: nmdc:faadcef69ec3b36ff6663e5728b488a2, Read QC Activity for nmdc:mga0pkw952 +INFO:root:PassingDataObject: nmdc:2340045e00b9520168f34aada96862dc +INFO:root:PassingDataObject: nmdc:611f15bbbecb10f9d403c0fda33ad586 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452654 +INFO:root:found 1 records +INFO:root:record: nmdc:faadcef69ec3b36ff6663e5728b488a2, ReadBased Analysis Activity for nmdc:mga0pkw952 +INFO:root:PassingDataObject: nmdc:f4acdc20a91aa1c97331dcfcd0f2cb15 +INFO:root:PassingDataObject: nmdc:142d2e029f5a3409f691fff5d6079e42 +INFO:root:PassingDataObject: nmdc:a4d2ca949b7fee03281b9b7403470b8d +INFO:root:PassingDataObject: nmdc:d9414dbc75a091abea67b84cd11cc684 +INFO:root:PassingDataObject: nmdc:16383216ecee71ba4698f75e0aac2f4c +INFO:root:PassingDataObject: nmdc:14484a00401758f587f2c6566b501972 +INFO:root:PassingDataObject: nmdc:13df2a0c8bf7302ef8f6c4fe3567d74e +INFO:root:PassingDataObject: nmdc:2d7ca3ffc4c631a0ac1f386c946adc00 +INFO:root:PassingDataObject: nmdc:22cd3a24372c4bcc010d0abb06305815 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452654 +INFO:root:found 1 records +INFO:root:record: nmdc:faadcef69ec3b36ff6663e5728b488a2, Assembly Activity for nmdc:mga0pkw952 +INFO:root:PassingDataObject: nmdc:06328b29508f1648cad02d7a48bbcbeb +INFO:root:PassingDataObject: nmdc:bfbb7441b59591e7aaad58b6050ad442 +INFO:root:PassingDataObject: nmdc:bee6a4c634bb81034586142ba2a3245c +INFO:root:PassingDataObject: nmdc:5606e0e2cc098740eea9f3a4bd4d27b8 +INFO:root:PassingDataObject: nmdc:b6111b1925ec73d39c0e98cbe706d94f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452654 +INFO:root:found 1 records +INFO:root:record: nmdc:faadcef69ec3b36ff6663e5728b488a2, Annotation Activity for nmdc:mga0pkw952 +INFO:root:PassingDataObject: nmdc:28b1198e06d5bbc428ee3620376ae405 +INFO:root:PassingDataObject: nmdc:10cd1be38de66d8aa0b4f04cdf2652d9 +INFO:root:PassingDataObject: nmdc:b359abc3af9df9eb2b8e5ee9343c9978 +INFO:root:PassingDataObject: nmdc:3df2ec4c946ec2b757023330217b32b1 +INFO:root:PassingDataObject: nmdc:cb4c1ed9714393deea356dea75edfd31 +INFO:root:PassingDataObject: nmdc:4be3bac793d0b7754f34b91810922fdb +INFO:root:PassingDataObject: nmdc:a3e3f83e6888623e3f0bf6916a3daf9b +INFO:root:PassingDataObject: nmdc:2d9efa35db988a7e58ef48e8fcd54181 +INFO:root:PassingDataObject: nmdc:dac96c36d76066d33bc2b68f4b8c64f2 +INFO:root:PassingDataObject: nmdc:527b742499216b85b3402fd8225f0ad4 +INFO:root:PassingDataObject: nmdc:19ccc203c90785a0db9c691e508341d8 +INFO:root:PassingDataObject: nmdc:4c2f41217af796b678dadcc6a03445fc +INFO:root:PassingDataObject: nmdc:49ac783b082636c7850877af8541a642 +INFO:root:PassingDataObject: nmdc:ceca18528911090ce487b247bea7887d +INFO:root:PassingDataObject: nmdc:e9b252e2bfa0bc3c49d55058bdeff745 +INFO:root:PassingDataObject: nmdc:9646e5f193075cf43f40349c36642de8 +INFO:root:PassingDataObject: nmdc:99d62ec9cefc719fdce4b17b5d2449dd +INFO:root:PassingDataObject: nmdc:f7d3f26e5f61ad566a6ff29a7f46b0b2 +INFO:root:PassingDataObject: nmdc:feabac8f5e9cf6c1edd17b98e9a4606c +INFO:root:PassingDataObject: nmdc:2623466f3deb03bc2c567b412c3953e2 +INFO:root:PassingDataObject: nmdc:955aae0ce0108b88df8d6491ca354e02 +INFO:root:PassingDataObject: nmdc:3376ba318d4ae305b2d4a9fa8ba0a9b8 +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452654 +INFO:root:found 1 records +INFO:root:record: nmdc:faadcef69ec3b36ff6663e5728b488a2, MAGs Analysis Activity for nmdc:mga0pkw952 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:faadcef69ec3b36ff6663e5728b488a2 +ERROR:root:FailedDataObject: nmdc:155e9d6c60b06a8d9f430261d7a2d322, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:faadcef69ec3b36ff6663e5728b488a2, MAGs Analysis Activity for nmdc:mga0pkw952 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452654 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-etmn8d77 +INFO:root:legacy_id: gold:Gp0452648 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-etmn8d77 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8f18fc28bca76ca35a5609dfc0f9ee0d +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0f117d55288f1df32049555de45c5385 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:dc24572d356fe77fdab701ea18913606 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452648 +INFO:root:found 3 records +INFO:root:record: nmdc:e3d7b138e18398d4fd3d8db07fa31b22, Read QC Activity for nmdc:mga02f9c77 +INFO:root:PassingDataObject: nmdc:d2f5fa9db9a3535437a22134467335bc +INFO:root:PassingDataObject: nmdc:457e8c96ab308ffaf3472424e04b4d80 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:63ebe0376f136f357c76e8452e4cb288, Read QC Activity for nmdc:mga0z7yz90 +INFO:root:PassingDataObject: nmdc:7a5e1e529ebe1d41c9ccc84e6873a6ad +INFO:root:PassingDataObject: nmdc:e8c81de8ea76c577a9d83344e09d47f7 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:f0577ccc61b232c3ae1fc4623c54811c, Read QC Activity for nmdc:mga0y97267 +INFO:root:PassingDataObject: nmdc:7491c8077bd29b39a0fc5b7b246f7638 +INFO:root:PassingDataObject: nmdc:73a599c900af364ca7a95e8c2c2eeb72 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452648 +INFO:root:found 3 records +INFO:root:record: nmdc:e3d7b138e18398d4fd3d8db07fa31b22, ReadBased Analysis Activity for nmdc:mga02f9c77 +INFO:root:PassingDataObject: nmdc:23e6dd0b3b5807b329782638c2c8099e +INFO:root:PassingDataObject: nmdc:47c1feaf21fdf53de718c3a21f3d082f +INFO:root:PassingDataObject: nmdc:dacb26640fae742ca54b9e68e83707c6 +INFO:root:PassingDataObject: nmdc:f68aa1cb9ee5de56f8b402bab7841c06 +INFO:root:PassingDataObject: nmdc:58c4e82881f111fffcb4d232a3fb1ee9 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:e3d7b138e18398d4fd3d8db07fa31b22 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:e3d7b138e18398d4fd3d8db07fa31b22 +ERROR:root:FailedDataObject: nmdc:e73ac84d89c854dbcfa216d7a8387ea5, +ERROR:root:FailedDataObject: nmdc:fc5e0e04540b6ee1bf8806ce46b88b4d, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e3d7b138e18398d4fd3d8db07fa31b22, ReadBased Analysis Activity for nmdc:mga02f9c77 +INFO:root:record: nmdc:f0577ccc61b232c3ae1fc4623c54811c, ReadBased Analysis Activity for nmdc:mga0y97267 +INFO:root:PassingDataObject: nmdc:6d9e8ffe2f68d56ca49d72dc5d7c5a4e +INFO:root:PassingDataObject: nmdc:94e9aef4f256d7886e00cebf88e2f2a3 +INFO:root:PassingDataObject: nmdc:2452f015850d15385fb10bf94a56c874 +INFO:root:PassingDataObject: nmdc:b295847a6bf9d816a1a3e863ab795e37 +INFO:root:PassingDataObject: nmdc:c30eaef4e19045f17160159181f9e8b5 +INFO:root:PassingDataObject: nmdc:6b2120d87384827fcb6508fa37e65fd0 +INFO:root:PassingDataObject: nmdc:0e35064ceba321f09132fad1ecfd84cb +INFO:root:PassingDataObject: nmdc:5fc834991ecf776ead23b8b825268bba +INFO:root:PassingDataObject: nmdc:e1c09225df5d5bf18fe5afe05e70f95e +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:63ebe0376f136f357c76e8452e4cb288, ReadBased Analysis Activity for nmdc:mga0z7yz90 +INFO:root:PassingDataObject: nmdc:62c4256bd484e87a30b9ced30020828f +INFO:root:PassingDataObject: nmdc:d68b217077fc45487402223e4faf9e90 +INFO:root:PassingDataObject: nmdc:b53039d8811bedc61627d615bebdbe85 +INFO:root:PassingDataObject: nmdc:f9d5ed42ce90915ba2cca816fa8edf70 +INFO:root:PassingDataObject: nmdc:4740d4cd7c4cd9f97f9f009be2516a5e +INFO:root:PassingDataObject: nmdc:6c8c08af594d9945798b7a0533003ce1 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:63ebe0376f136f357c76e8452e4cb288 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:63ebe0376f136f357c76e8452e4cb288 +ERROR:root:FailedDataObject: nmdc:22fcaab78d84f8fc405ba14f0fd84121, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:63ebe0376f136f357c76e8452e4cb288, ReadBased Analysis Activity for nmdc:mga0z7yz90 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452648 +INFO:root:found 3 records +INFO:root:record: nmdc:e3d7b138e18398d4fd3d8db07fa31b22, Assembly Activity for nmdc:mga02f9c77 +INFO:root:PassingDataObject: nmdc:36d47ce84123c42497196f4d4833f494 +INFO:root:PassingDataObject: nmdc:fb7a5036f8f0b75a9b96f893f84fe41f +INFO:root:PassingDataObject: nmdc:5a3e365f322fa2defe4eb29e347c9981 +INFO:root:PassingDataObject: nmdc:f2be07c14f7972077a959823b051e1af +INFO:root:PassingDataObject: nmdc:833ef6731e94a267bc546b120b05fd86 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:63ebe0376f136f357c76e8452e4cb288, Assembly Activity for nmdc:mga0z7yz90 +INFO:root:PassingDataObject: nmdc:92cb881b111c22a6cabb371661ffabce +INFO:root:PassingDataObject: nmdc:56e684ac74e0a23afa0f44cbec39e96b +INFO:root:PassingDataObject: nmdc:486d37d7efd6fa02dda91e68e6b278ec +INFO:root:PassingDataObject: nmdc:3d955713b3039872036c06d6105ebbda +INFO:root:PassingDataObject: nmdc:00a7885ba2bd2106c76d2d6334e2452e +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:f0577ccc61b232c3ae1fc4623c54811c, Assembly Activity for nmdc:mga0y97267 +INFO:root:PassingDataObject: nmdc:38b70a167719cf35315ee6f937e05939 +INFO:root:PassingDataObject: nmdc:86c7bb3b07129c972d43da5ec6e3262c +INFO:root:PassingDataObject: nmdc:1cb45e1bd297a1dd808b8a615ba103ce +INFO:root:PassingDataObject: nmdc:0f01ff89933da1b585ed9439eaf173e8 +INFO:root:PassingDataObject: nmdc:683c806f6cef7d610564a9310a34b5a2 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452648 +INFO:root:found 3 records +INFO:root:record: nmdc:e3d7b138e18398d4fd3d8db07fa31b22, Annotation Activity for nmdc:mga02f9c77 +INFO:root:PassingDataObject: nmdc:2ab80ec7586ad578054a1245da8f5809 +INFO:root:PassingDataObject: nmdc:b99ba3e202c7d7dd883c828cb568c00d +INFO:root:PassingDataObject: nmdc:05f6b742656797387b886d67348a25cd +INFO:root:PassingDataObject: nmdc:45fd35f8de3c94ddc1ac37935f47552b +INFO:root:PassingDataObject: nmdc:1409220ed86ec7eaa0421e1f8c5c7830 +INFO:root:PassingDataObject: nmdc:b2d3bf255401694a363290ccbd712af1 +INFO:root:PassingDataObject: nmdc:3f87177448ee5f28658984c38efa273f +INFO:root:PassingDataObject: nmdc:7dc9bac13dec3d30d5b0438302b92f2a +INFO:root:PassingDataObject: nmdc:0ba7ee56d0980bfcf064a82306e19f7a +INFO:root:PassingDataObject: nmdc:027b00887245af7aebfbcbba6a40bb2a +INFO:root:PassingDataObject: nmdc:2ed2c116c7e38703fe846456e288ae93 +INFO:root:PassingDataObject: nmdc:320a04a38bec56513883a2698fa44de7 +INFO:root:PassingDataObject: nmdc:d7518208facbc13c3d8c1a85e216a916 +INFO:root:PassingDataObject: nmdc:8305f41099d33b191266cec3b8ac19f9 +INFO:root:PassingDataObject: nmdc:261d179d318bcc969c1df910a5c92bb3 +INFO:root:PassingDataObject: nmdc:f6d652c557ae2fc4b5a00e95dcb5f164 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:e3d7b138e18398d4fd3d8db07fa31b22 +ERROR:root:FailedDataObject: nmdc:16f7c8e5e5521106ddc4e90a2938e796, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e3d7b138e18398d4fd3d8db07fa31b22, Annotation Activity for nmdc:mga02f9c77 +INFO:root:record: nmdc:f0577ccc61b232c3ae1fc4623c54811c, Annotation Activity for nmdc:mga0y97267 +INFO:root:PassingDataObject: nmdc:512382af35fdf196929056cf8bfcf74d +INFO:root:PassingDataObject: nmdc:457e3960f8fe2941eaf14345c965db5e +INFO:root:PassingDataObject: nmdc:0c3336a0bf2f7564b38cb86bece90ba2 +INFO:root:PassingDataObject: nmdc:5b693388ecf592e23f36384bc9df6a91 +INFO:root:PassingDataObject: nmdc:1375b1e45b24d7c6585331f26a7822e8 +INFO:root:PassingDataObject: nmdc:0f96491cad6e419523258c32068b654f +INFO:root:PassingDataObject: nmdc:edee1adb352a90ea33c7f0dd87520675 +INFO:root:PassingDataObject: nmdc:0d8f9c1d469e0d5c6646e5ed1cf2b8ee +INFO:root:PassingDataObject: nmdc:6c735e5d2b9ac1ab6ef6aeae5550392b +INFO:root:PassingDataObject: nmdc:e587ac5e9e9798a07307b7a85a00531b +INFO:root:PassingDataObject: nmdc:2419f92b8d055a8959f9cf2192e598f9 +INFO:root:PassingDataObject: nmdc:c38c80ee0a57997744f288794965e8f8 +INFO:root:PassingDataObject: nmdc:392cee45a46c96eabe3bbc8fa7a66486 +INFO:root:PassingDataObject: nmdc:1366378fc0fc4abce3e9c5c2d398c913 +INFO:root:PassingDataObject: nmdc:5302719f8f9ff25ebad1d98c6e4216ab +INFO:root:PassingDataObject: nmdc:17b464b4a9a7a68a11d23b6893853e48 +INFO:root:PassingDataObject: nmdc:52b727b1b9b8e95037851fa604596193 +INFO:root:PassingDataObject: nmdc:4b571c9894dc7a9af047cf56bf4e9bfd +INFO:root:PassingDataObject: nmdc:012c10c59cd67c814fa0e1c3efd01d81 +INFO:root:PassingDataObject: nmdc:f68588cc4d0bca6bbfb71aa02dda3de8 +INFO:root:PassingDataObject: nmdc:a36599690c80cb99153f549340c0f724 +INFO:root:PassingDataObject: nmdc:650a32240bbc0438f07f048448008dd0 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:63ebe0376f136f357c76e8452e4cb288, Annotation Activity for nmdc:mga0z7yz90 +INFO:root:PassingDataObject: nmdc:869b7201f76e2d1eb046fed43af5bff3 +INFO:root:PassingDataObject: nmdc:b587603e84af8316e35026c37fe1d4ad +INFO:root:PassingDataObject: nmdc:a2079f69b0aba140f3bb9f1e41cd8c54 +INFO:root:PassingDataObject: nmdc:7ba28bde88e05f0aa0f099a03fa20b70 +INFO:root:PassingDataObject: nmdc:b613188f3b5f3523272b41bef99fc550 +INFO:root:PassingDataObject: nmdc:4334d9b315dfe3f613abac7be6b216e3 +INFO:root:PassingDataObject: nmdc:b1b289266969414d18606951b0f1c9f6 +INFO:root:PassingDataObject: nmdc:210c6fb24abd1cb0a20eacee0438af8a +INFO:root:PassingDataObject: nmdc:b67a596e100943165efa7bdb95ea4c3e +INFO:root:PassingDataObject: nmdc:beeb7f906ba193894e8c62fc98194593 +INFO:root:PassingDataObject: nmdc:3b2d119f5d48b3d61e4d65f3869af4d2 +INFO:root:PassingDataObject: nmdc:a96da4746f1edf0cd2bb57ab6d622cc8 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:63ebe0376f136f357c76e8452e4cb288 +ERROR:root:FailedDataObject: nmdc:1758751956ecc85a0d739be3ab4895e3, +ERROR:root:FailedDataObject: nmdc:78c8a3e0dc138eb9d7014a9e31e6d7d3, +ERROR:root:FailedDataObject: nmdc:9ce7abde2b00276e18370507ff37e3e8, +ERROR:root:FailedDataObject: nmdc:ae6c7758dd121fd67f86a96ec8f16523, +ERROR:root:FailedDataObject: nmdc:165e3db9800b36e83e9a0310e9d801aa, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:63ebe0376f136f357c76e8452e4cb288, Annotation Activity for nmdc:mga0z7yz90 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452648 +INFO:root:found 3 records +INFO:root:record: nmdc:e3d7b138e18398d4fd3d8db07fa31b22, MAGs Analysis Activity for nmdc:mga02f9c77 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e3d7b138e18398d4fd3d8db07fa31b22 +ERROR:root:FailedDataObject: nmdc:1e9fb840d74b22b74f3a06563d5e38a1, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e3d7b138e18398d4fd3d8db07fa31b22, MAGs Analysis Activity for nmdc:mga02f9c77 +INFO:root:record: nmdc:f0577ccc61b232c3ae1fc4623c54811c, MAGs Analysis Activity for nmdc:mga0y97267 +INFO:root:PassingDataObject: nmdc:e6de538ee05f16400c6a8150a7a72f22 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:f0577ccc61b232c3ae1fc4623c54811c +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f0577ccc61b232c3ae1fc4623c54811c, MAGs Analysis Activity for nmdc:mga0y97267 +INFO:root:record: nmdc:63ebe0376f136f357c76e8452e4cb288, MAGs Analysis Activity for nmdc:mga0z7yz90 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:63ebe0376f136f357c76e8452e4cb288 +ERROR:root:FailedDataObject: nmdc:a7cfcdc9f9eea0ad501fb527fc5614fa, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:63ebe0376f136f357c76e8452e4cb288, MAGs Analysis Activity for nmdc:mga0z7yz90 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452648 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-t5fy6291 +INFO:root:legacy_id: gold:Gp0452657 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-t5fy6291 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ad73e0fd7535de96b720855a314e0e5f +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:dd69e3c17abcbd043a8ec67b26157ae0 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ad1a3f596703239d99c0054fc0bc57aa +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452657 +INFO:root:found 3 records +INFO:root:record: nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa, Read QC Activity for nmdc:mga0f74845 +INFO:root:PassingDataObject: nmdc:f2320a379e70a523862d6e92bdfa45b4 +INFO:root:PassingDataObject: nmdc:415581af9548d690b9e2a3df39a1264c +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:afeeec813929cbe40c84e372b2bd55f7, Read QC Activity for nmdc:mga0amm328 +INFO:root:PassingDataObject: nmdc:694bf929300d09eef3c2ab202585c3ab +INFO:root:PassingDataObject: nmdc:c731f0824258e563a58b35f9d9508c82 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:45babdf91fa207caf000f8b4c0059056, Read QC Activity for nmdc:mga00s2q55 +INFO:root:PassingDataObject: nmdc:6b7654933b2c7a017a0f88b4f058a58d +INFO:root:PassingDataObject: nmdc:b214c0c0289515b0402cb6599ba96c03 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452657 +INFO:root:found 3 records +INFO:root:record: nmdc:afeeec813929cbe40c84e372b2bd55f7, ReadBased Analysis Activity for nmdc:mga0amm328 +INFO:root:PassingDataObject: nmdc:43c1b291fd5701c6b2d10ac0b35b86e8 +INFO:root:PassingDataObject: nmdc:f9cb738426a634de63236af79b96e36c +INFO:root:PassingDataObject: nmdc:5b9e4b9172ca6db5b2035797dba61058 +INFO:root:PassingDataObject: nmdc:a99912bbc24fd6c29a1a1b28da85147a +INFO:root:PassingDataObject: nmdc:d95474aa3a97e642c332be89920bd96f +INFO:root:PassingDataObject: nmdc:7defebccddd43ac16bf8622f81cb7b73 +INFO:root:PassingDataObject: nmdc:c1d6c9852b0a81ade8516edd656d479b +INFO:root:PassingDataObject: nmdc:b677a5a059e0214ef53ad6d743aabf0d +INFO:root:PassingDataObject: nmdc:d25288973a03e02e11bb107d71670376 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:45babdf91fa207caf000f8b4c0059056, ReadBased Analysis Activity for nmdc:mga00s2q55 +INFO:root:PassingDataObject: nmdc:7bd18575c4f7884711d3f5ea888898d2 +INFO:root:PassingDataObject: nmdc:f72d0799a8b556b25ca041804681f874 +INFO:root:PassingDataObject: nmdc:68ab52e2aae5d9b54b74f342318af9fd +INFO:root:PassingDataObject: nmdc:1366ad5e228fad68bf3bd54a5d50082e +INFO:root:PassingDataObject: nmdc:e5112cf30b71cde173f1f5f5e10f7491 +INFO:root:PassingDataObject: nmdc:db61fa5b9eef747f4233f62c33d71bf6 +INFO:root:PassingDataObject: nmdc:1c19ca15bfdb56c68dab4e684774b624 +INFO:root:PassingDataObject: nmdc:b7302f73c7d6950346c1728c38b481dc +INFO:root:PassingDataObject: nmdc:2e69e70191332d744832e83f3a8685a0 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa, ReadBased Analysis Activity for nmdc:mga0f74845 +INFO:root:PassingDataObject: nmdc:b12a37ebefa4b7c201e442bc67edea67 +INFO:root:PassingDataObject: nmdc:76f2c3c5dc2047d1e95452b57a9a5f60 +INFO:root:PassingDataObject: nmdc:34966b1cef6208747a17384af9f2a500 +INFO:root:PassingDataObject: nmdc:cf083e9a0d1ede6d40e282405a470c75 +INFO:root:PassingDataObject: nmdc:d9b6ea811c64cd3801878129c531b3e6 +INFO:root:PassingDataObject: nmdc:3a5b6741581f9fdf4cbda9409734479b +INFO:root:PassingDataObject: nmdc:9917d6c484925c16f73ead276070363b +INFO:root:PassingDataObject: nmdc:432057f22e325eaeeb567774842aa910 +INFO:root:PassingDataObject: nmdc:babc07bfc532f87386257d6e47626987 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452657 +INFO:root:found 3 records +INFO:root:record: nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa, Assembly Activity for nmdc:mga0f74845 +INFO:root:PassingDataObject: nmdc:2693d971e3d90a76a0c86f0a702973b5 +INFO:root:PassingDataObject: nmdc:f65cc0361eb09d5cb7611f04053669c7 +INFO:root:PassingDataObject: nmdc:d638bb44f802429e9659b776c78724ce +INFO:root:PassingDataObject: nmdc:87f05b098fac2d505a89573e8fb170ad +INFO:root:PassingDataObject: nmdc:712d16f050496ac2e7e3bad9729616db +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:afeeec813929cbe40c84e372b2bd55f7, Assembly Activity for nmdc:mga0amm328 +INFO:root:PassingDataObject: nmdc:9927d7cec5fa705af38d47241de8a9f2 +INFO:root:PassingDataObject: nmdc:4b4725798faadbd5cfbf6d2e7ae8bee7 +INFO:root:PassingDataObject: nmdc:187db944970f3b9aa02dc3edc6b70351 +INFO:root:PassingDataObject: nmdc:9441936dca15a420e4127396fd05bea5 +INFO:root:PassingDataObject: nmdc:067222c442552f53ec554712a9ef2f2b +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:45babdf91fa207caf000f8b4c0059056, Assembly Activity for nmdc:mga00s2q55 +INFO:root:PassingDataObject: nmdc:b72f42f9c024152c5246a2d6de325bde +INFO:root:PassingDataObject: nmdc:782e961814552a2f21d637568fd7035c +INFO:root:PassingDataObject: nmdc:b2badd8359677a968f8906c84194f80e +INFO:root:PassingDataObject: nmdc:dcae19829a8ece09495135f522890557 +INFO:root:PassingDataObject: nmdc:b2912204de7916b3ae65588bb98caddf +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452657 +INFO:root:found 3 records +INFO:root:record: nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa, Annotation Activity for nmdc:mga0f74845 +INFO:root:PassingDataObject: nmdc:eb720b230e0a593e03ec0a83d35f8f57 +INFO:root:PassingDataObject: nmdc:6ef3ddffc6f5e2adfde569658a2c21b9 +INFO:root:PassingDataObject: nmdc:9f84cd5a37a4fc7b4e7cfb7634701784 +INFO:root:PassingDataObject: nmdc:da5d4bcb95089939ad6aa7e1cc37176a +INFO:root:PassingDataObject: nmdc:728a594def773abd4aca09583d2f1a36 +INFO:root:PassingDataObject: nmdc:aae7c7aa9b4ec5b2e7d5a3ac100d1b1d +INFO:root:PassingDataObject: nmdc:02dd60156faef3cb1a6240d6723daeb2 +INFO:root:PassingDataObject: nmdc:c5ab921b99d74a84745c64d61bf6525d +INFO:root:PassingDataObject: nmdc:9398f5a8f59a342b25cefc9866359ef2 +INFO:root:PassingDataObject: nmdc:fcc100800ee833d58116ac98c97293a7 +INFO:root:PassingDataObject: nmdc:aadc59ef66a09f8c7083cb05d0874e6b +INFO:root:PassingDataObject: nmdc:f1f43c724a683e409c50a7c916765281 +INFO:root:PassingDataObject: nmdc:867065af45a21253461cb3b8225141ac +INFO:root:PassingDataObject: nmdc:76ea55db1ad058166f134d0a697e3fb0 +INFO:root:PassingDataObject: nmdc:12027ac29aa2cb590d140bc06ad19ea6 +INFO:root:PassingDataObject: nmdc:53413291e55b0b55dc99334c257a8986 +INFO:root:PassingDataObject: nmdc:012b98545b9c738331b8512e04f0490d +INFO:root:PassingDataObject: nmdc:14d7904d77529eb28a0549c6d7c8db7b +INFO:root:PassingDataObject: nmdc:0e4dcd336c9a8e249d0b289c30fe4641 +INFO:root:PassingDataObject: nmdc:9427707fce6676ead171c4a3d60061bf +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa, Annotation Activity for nmdc:mga0f74845 +INFO:root:record: nmdc:afeeec813929cbe40c84e372b2bd55f7, Annotation Activity for nmdc:mga0amm328 +INFO:root:PassingDataObject: nmdc:8fca780c48dbb0a9c7e7877a49cebec5 +INFO:root:PassingDataObject: nmdc:f5ff75285e58802f4bb25cd0bbf3a877 +INFO:root:PassingDataObject: nmdc:ee18b7ce212534e1c9001b6d5de3a31f +INFO:root:PassingDataObject: nmdc:31adcc196d9b69f52955129f56a7bb39 +INFO:root:PassingDataObject: nmdc:f07bac9d79954fa53a6201c41b003c9c +INFO:root:PassingDataObject: nmdc:d0b905ff09e9946cd2e58ef5a8a33d6c +INFO:root:PassingDataObject: nmdc:a0c4893f9850410e3e2c91935a79c7f2 +INFO:root:PassingDataObject: nmdc:81768d1f97e50f5c6afcd421d936b11e +INFO:root:PassingDataObject: nmdc:a63df27bf9731edca1def544c859639f +INFO:root:PassingDataObject: nmdc:9b213cae13efa520d24b9d0e9d4e7b70 +INFO:root:PassingDataObject: nmdc:7aa03aba658c4811b557cc5f864c9e63 +INFO:root:PassingDataObject: nmdc:0840f9e6534e70431b060fa71b70095d +INFO:root:PassingDataObject: nmdc:cedaf8eeaa375da354101b5803d577bd +INFO:root:PassingDataObject: nmdc:76b863b3673472e8575ab406e3c13454 +INFO:root:PassingDataObject: nmdc:a8688920bca32085fc8e9f6ad9136ce0 +INFO:root:PassingDataObject: nmdc:3e2ca0f35776a9613194f0b7ee3bd483 +INFO:root:PassingDataObject: nmdc:52780ea9649bde89550820f35bc9ee03 +INFO:root:PassingDataObject: nmdc:e521ed7b00a3c778ecb5646a4da88f28 +INFO:root:PassingDataObject: nmdc:8218472063a352351041d08445ddaad7 +INFO:root:PassingDataObject: nmdc:b0971b2b11f1f4f4a6e7c4a05f2ab5cb +INFO:root:PassingDataObject: nmdc:9cbd0f607560612594847ef553591381 +INFO:root:PassingDataObject: nmdc:ecf83f37b595e3ae0cf445f8c7b8f121 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:45babdf91fa207caf000f8b4c0059056, Annotation Activity for nmdc:mga00s2q55 +INFO:root:PassingDataObject: nmdc:0549d35e6d78b412572ca55225ef85f3 +INFO:root:PassingDataObject: nmdc:3a92db0fd06b892a6c46187001c39174 +INFO:root:PassingDataObject: nmdc:e135ed8a1aac04ddfcbe0403d40e07a6 +INFO:root:PassingDataObject: nmdc:438ed1f931306b564abafe97760a0cfe +INFO:root:PassingDataObject: nmdc:363e7287c0b59c93fb251e13fbe23afa +INFO:root:PassingDataObject: nmdc:8559484a192f7920387e1c78b4c5cfeb +INFO:root:PassingDataObject: nmdc:152b1c669f0ad53188f11bc80e7c1561 +INFO:root:PassingDataObject: nmdc:5cf9cb638447869e87f87ef7752ae9e9 +INFO:root:PassingDataObject: nmdc:db7506770966747d8ec72775a1f175b3 +INFO:root:PassingDataObject: nmdc:d8a913f9c781c61eb3ef9ea989d8a9d7 +INFO:root:PassingDataObject: nmdc:3e5fc5b628c78d9bfc81417566ca9eb6 +INFO:root:PassingDataObject: nmdc:daf5424f291f476bc59601d0c82077d8 +INFO:root:PassingDataObject: nmdc:0844af65105ebd5052df897d94282ce0 +INFO:root:PassingDataObject: nmdc:75da3e02117e9630bdc6759ad87676d4 +INFO:root:PassingDataObject: nmdc:5eed61408b98e4167e5519d8fc11db55 +INFO:root:PassingDataObject: nmdc:024c377eaf62cb9d7c862334977b3f12 +INFO:root:PassingDataObject: nmdc:4df4253e0541f82005315fddd7c5211f +INFO:root:PassingDataObject: nmdc:964d8e6cb0be4881b1c55bc46829391d +INFO:root:PassingDataObject: nmdc:1e0be6ce30b2015f5de4a4772ca2c7ba +INFO:root:PassingDataObject: nmdc:97197d4e6ef896c5bbf81da6fd22ea24 +INFO:root:PassingDataObject: nmdc:44e8d538320db3b98d4e109d7acc716d +INFO:root:PassingDataObject: nmdc:fb3646c7085337ec23c2726068bb194f +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452657 +INFO:root:found 3 records +INFO:root:record: nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa, MAGs Analysis Activity for nmdc:mga0f74845 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa +ERROR:root:FailedDataObject: nmdc:639f0f851bd765c94fa70b8d5c6b8171, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa, MAGs Analysis Activity for nmdc:mga0f74845 +INFO:root:record: nmdc:afeeec813929cbe40c84e372b2bd55f7, MAGs Analysis Activity for nmdc:mga0amm328 +INFO:root:PassingDataObject: nmdc:e7a59db16bbfc051608d2216fa98190a +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:afeeec813929cbe40c84e372b2bd55f7 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:afeeec813929cbe40c84e372b2bd55f7, MAGs Analysis Activity for nmdc:mga0amm328 +INFO:root:record: nmdc:45babdf91fa207caf000f8b4c0059056, MAGs Analysis Activity for nmdc:mga00s2q55 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:45babdf91fa207caf000f8b4c0059056 +ERROR:root:FailedDataObject: nmdc:e62555697c9e25170fa1bd7264833308, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:45babdf91fa207caf000f8b4c0059056, MAGs Analysis Activity for nmdc:mga00s2q55 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452657 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-kphcv369 +INFO:root:legacy_id: gold:Gp0452667 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-kphcv369 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d58b7394566de1ba629529c1d7545fa5 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452667 +INFO:root:found 1 records +INFO:root:record: nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8, Read QC Activity for nmdc:mga03ggs34 +INFO:root:PassingDataObject: nmdc:79f16f46c836c25380e6d400b98e9858 +INFO:root:PassingDataObject: nmdc:40b0499260d9198c813a816dd3e40f1a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452667 +INFO:root:found 1 records +INFO:root:record: nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8, ReadBased Analysis Activity for nmdc:mga03ggs34 +INFO:root:PassingDataObject: nmdc:a26774068f497dd87f83f9592fca33c5 +INFO:root:PassingDataObject: nmdc:1f4749d52a2c06534691a41fd7e0b146 +INFO:root:PassingDataObject: nmdc:8afef4bbf55f3be55ca1553d6b65e269 +INFO:root:PassingDataObject: nmdc:2f94c42b84a8d0c5b6bcb08158a34945 +INFO:root:PassingDataObject: nmdc:a588822c169d60000d582fe9ee6cab55 +INFO:root:PassingDataObject: nmdc:1da4a661f1b4c22b4a22bb00dca5b075 +INFO:root:PassingDataObject: nmdc:89d6e1165eba1c33f7a319e0481e6aea +INFO:root:PassingDataObject: nmdc:ddae2df48a77bfb96e9e195cd631b22f +INFO:root:PassingDataObject: nmdc:942e612f4daf7505edb6cb3327c7f0b4 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452667 +INFO:root:found 1 records +INFO:root:record: nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8, Assembly Activity for nmdc:mga03ggs34 +INFO:root:PassingDataObject: nmdc:d1112a308ed9f800905343e6be1dac06 +INFO:root:PassingDataObject: nmdc:7d192d785a0254deea3627e0230347e9 +INFO:root:PassingDataObject: nmdc:23eff1840ec4b84c6a91e731b4bf057e +INFO:root:PassingDataObject: nmdc:ed451b729e11addde2f6c8c1d642c694 +INFO:root:PassingDataObject: nmdc:d1dda6b21de6729072117a2ea0eb93f4 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452667 +INFO:root:found 1 records +INFO:root:record: nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8, Annotation Activity for nmdc:mga03ggs34 +INFO:root:PassingDataObject: nmdc:bc2eb4ac878e0bb0d9a8bac69a930386 +INFO:root:PassingDataObject: nmdc:9e5df2fa9e6010bec3a15c49cff29b7c +INFO:root:PassingDataObject: nmdc:6adf587067dcd1f42ccde7f879d2a555 +INFO:root:PassingDataObject: nmdc:fdfcd663a00b5df81d22e41107ebad0f +INFO:root:PassingDataObject: nmdc:d47a11658d7917eaeda2a6132d5c4c36 +INFO:root:PassingDataObject: nmdc:98308d84d908536c49cee059a2ae9950 +INFO:root:PassingDataObject: nmdc:6373295ab3b53186b6c07eb078d17d48 +INFO:root:PassingDataObject: nmdc:72f86e33f06974977bd53ee3d06e646a +INFO:root:PassingDataObject: nmdc:7b3de5096159886f22b975fabd2f39d3 +INFO:root:PassingDataObject: nmdc:ad573891213ed0941fbcb05a05f66a43 +INFO:root:PassingDataObject: nmdc:5b09531814ab365e99a93b7be7ca0c20 +INFO:root:PassingDataObject: nmdc:a486e05ea8f6738700a75d7fe82850cc +INFO:root:PassingDataObject: nmdc:24b9b47982331b5530d50b89ea83fa39 +INFO:root:PassingDataObject: nmdc:93ca6f97878675afd14a9a690eb67e3c +INFO:root:PassingDataObject: nmdc:41b6b44220c506904484a4acd00a7da4 +INFO:root:PassingDataObject: nmdc:b737b494249726973a43371df95b0929 +INFO:root:PassingDataObject: nmdc:c7e91ebba6b6d5703c6ece2510801926 +INFO:root:PassingDataObject: nmdc:6cf908215efe3d357c066295f823d4bd +INFO:root:PassingDataObject: nmdc:1017fd032d9079b7a75b029888c9eaae +INFO:root:PassingDataObject: nmdc:0a5c22c72ed4583888659d129aa5474c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8, Annotation Activity for nmdc:mga03ggs34 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452667 +INFO:root:found 1 records +INFO:root:record: nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8, MAGs Analysis Activity for nmdc:mga03ggs34 +INFO:root:PassingDataObject: nmdc:ec4986bc98ddd1997c2376cee3696361 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8, MAGs Analysis Activity for nmdc:mga03ggs34 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452667 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-x3dfq162 +INFO:root:legacy_id: gold:Gp0452710 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-x3dfq162 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f1b5fe57f2b143861c39cb24570e7768 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:66c8ff5150fe7589a4f44c32ee85b6b2 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:463bdac334608a92dd1d271af228b414 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452710 +INFO:root:found 3 records +INFO:root:record: nmdc:030d27b0b825c231aeea9bdd8b2b3f50, Read QC Activity for nmdc:mga0xvbj60 +INFO:root:PassingDataObject: nmdc:72be943990e8a805cecf307c6dc978f9 +INFO:root:PassingDataObject: nmdc:94f45b373f14afe1f22ba29b4e568ca9 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:6ff9c447edb9ab7ac019057063dd2002, Read QC Activity for nmdc:mga0ws6r16 +INFO:root:PassingDataObject: nmdc:f2563bb982dab65f07b04e0033a0395d +INFO:root:PassingDataObject: nmdc:d40dc907041fdf212314b01d02b4a003 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:57c981b1d9e2a7a7fee4181f7275a959, Read QC Activity for nmdc:mga0vgv058 +INFO:root:PassingDataObject: nmdc:5913faeb6e2ae21559f2bc7c3638408b +INFO:root:PassingDataObject: nmdc:70e6c6e455965e7543aba88bb4875e35 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452710 +INFO:root:found 3 records +INFO:root:record: nmdc:030d27b0b825c231aeea9bdd8b2b3f50, ReadBased Analysis Activity for nmdc:mga0xvbj60 +INFO:root:PassingDataObject: nmdc:7f262648c5b2e5b465c905c52ae16d98 +INFO:root:PassingDataObject: nmdc:a4c280c6773f7aade157e4c24e483f20 +INFO:root:PassingDataObject: nmdc:f5d9f5acae1f36d56ab59fff5ba9da3b +INFO:root:PassingDataObject: nmdc:d26482a91cc384f2b8af655302156cae +INFO:root:PassingDataObject: nmdc:9305adb8c2956432cf7bab45375829cc +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:030d27b0b825c231aeea9bdd8b2b3f50 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:030d27b0b825c231aeea9bdd8b2b3f50 +ERROR:root:FailedDataObject: nmdc:bc31e4b0551a8ec46b95640b07259e18, +ERROR:root:FailedDataObject: nmdc:54e4a2fabcd4230615153f6801900f8c, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:030d27b0b825c231aeea9bdd8b2b3f50, ReadBased Analysis Activity for nmdc:mga0xvbj60 +INFO:root:record: nmdc:6ff9c447edb9ab7ac019057063dd2002, ReadBased Analysis Activity for nmdc:mga0ws6r16 +INFO:root:PassingDataObject: nmdc:d4065a2bb934351e3e875137748d6bf6 +INFO:root:PassingDataObject: nmdc:fab99f8d9d69d01920f4950985d4a7a9 +INFO:root:PassingDataObject: nmdc:21b5e97529a2fdcf341c4cf38f69b3f3 +INFO:root:PassingDataObject: nmdc:4a041a71ae5539540ff4e2c6b77a7087 +INFO:root:PassingDataObject: nmdc:46fd1c9100793236350073d43ef3875b +INFO:root:PassingDataObject: nmdc:16867ae818134f0356d987f4fbec35d7 +INFO:root:PassingDataObject: nmdc:93cf530db6d444da3a9c7e0b4e6e148c +INFO:root:PassingDataObject: nmdc:dc3397e7748234bfbda87bca37d148be +INFO:root:PassingDataObject: nmdc:02b01950d135a3915a4d648f7214d9e2 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:57c981b1d9e2a7a7fee4181f7275a959, ReadBased Analysis Activity for nmdc:mga0vgv058 +INFO:root:PassingDataObject: nmdc:6a5484fdc53b72226a5ae5a884b304f9 +INFO:root:PassingDataObject: nmdc:3ac0c37816dcd1c17a818e13c60e2bb0 +INFO:root:PassingDataObject: nmdc:ba90e7d79a95a1f6706004ad88947547 +INFO:root:PassingDataObject: nmdc:f335c4221d817a322a0200241f99fe80 +INFO:root:PassingDataObject: nmdc:070c7ea26581495fb3f3561a71b1bf5a +INFO:root:PassingDataObject: nmdc:fa810c1148588e93778a250e09f86ac5 +INFO:root:PassingDataObject: nmdc:fe46e479ccea4c18cf50249fb7405714 +INFO:root:PassingDataObject: nmdc:e6499e6073520ea0908de4309613dbb4 +INFO:root:PassingDataObject: nmdc:0c9a38067266b7f59648b9c993a15e8b +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452710 +INFO:root:found 3 records +INFO:root:record: nmdc:030d27b0b825c231aeea9bdd8b2b3f50, Assembly Activity for nmdc:mga0xvbj60 +INFO:root:PassingDataObject: nmdc:22fa9738db5425f29bcec858621792c5 +INFO:root:PassingDataObject: nmdc:44d5b2e1e6875f9f7fc1d81a21a2d455 +INFO:root:PassingDataObject: nmdc:fa7e138afd306d2b4b5434727a43d2a0 +INFO:root:PassingDataObject: nmdc:97fcae8995784edb115d39a977afe376 +INFO:root:PassingDataObject: nmdc:db62040244cb893b48ed33219de71e4c +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:6ff9c447edb9ab7ac019057063dd2002, Assembly Activity for nmdc:mga0ws6r16 +INFO:root:PassingDataObject: nmdc:0ed786ead130b2e4d8a464bb1f10b0fc +INFO:root:PassingDataObject: nmdc:cb06b53ad60e23cad591fa29292abf1f +INFO:root:PassingDataObject: nmdc:60a0c00483f226fa48519fe0e64c7016 +INFO:root:PassingDataObject: nmdc:b8a452944da1799d04a1ac812e7c09c1 +INFO:root:PassingDataObject: nmdc:def5df1282b973171c9fa930b0c4bfdb +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:57c981b1d9e2a7a7fee4181f7275a959, Assembly Activity for nmdc:mga0vgv058 +INFO:root:PassingDataObject: nmdc:0fd4fbe1bf575913cd44282a53c798bc +INFO:root:PassingDataObject: nmdc:4ddfd3835205d4e09f2046e4ac4d1109 +INFO:root:PassingDataObject: nmdc:8a972e43f2708309a28e5342bfa5576a +INFO:root:PassingDataObject: nmdc:4efa2027b63bb81a53835906a0af172d +INFO:root:PassingDataObject: nmdc:33a6eef89e64037c52f28535e5a4cf9e +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452710 +INFO:root:found 3 records +INFO:root:record: nmdc:030d27b0b825c231aeea9bdd8b2b3f50, Annotation Activity for nmdc:mga0xvbj60 +INFO:root:PassingDataObject: nmdc:c2e3c6a081c0aa8bd409834caf67e143 +INFO:root:PassingDataObject: nmdc:7f7644245f2cb2085db8eba5b5f43616 +INFO:root:PassingDataObject: nmdc:c30fedb580bb60959726e4ce60db99b3 +INFO:root:PassingDataObject: nmdc:4ac757b89afe4ede813a10c4e8f16d1e +INFO:root:PassingDataObject: nmdc:261b70b15fe6cdb33bf8a9336400059d +INFO:root:PassingDataObject: nmdc:6858bbb27b9876b91ed9e36799a99b9f +INFO:root:PassingDataObject: nmdc:70eab1efb25f82b2a20fdd131a08af21 +INFO:root:PassingDataObject: nmdc:9268469c8c07dcd4071d7a308d54e06a +INFO:root:PassingDataObject: nmdc:bb0b307a360b25d4c912a537a943e661 +INFO:root:PassingDataObject: nmdc:e2936f37a65b4836d8b7c65de3eceb8f +INFO:root:PassingDataObject: nmdc:a8c55517c3ab0920f8513884e969b99d +INFO:root:PassingDataObject: nmdc:b2128db71f70fe37c48db013b73e24ed +INFO:root:PassingDataObject: nmdc:27026322e37485bd3f590006538156b9 +INFO:root:PassingDataObject: nmdc:274d35b389a4077787ff246b6921349d +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:030d27b0b825c231aeea9bdd8b2b3f50 +ERROR:root:FailedDataObject: nmdc:cca9a4b8a322b270edf054fa9d8785b6, +ERROR:root:FailedDataObject: nmdc:8136755a367b073cf38274e5855a8216, +ERROR:root:failing_data_objects: 16 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:030d27b0b825c231aeea9bdd8b2b3f50, Annotation Activity for nmdc:mga0xvbj60 +INFO:root:record: nmdc:6ff9c447edb9ab7ac019057063dd2002, Annotation Activity for nmdc:mga0ws6r16 +INFO:root:PassingDataObject: nmdc:6c2e0decc46bc62749344b0eb90c9b11 +INFO:root:PassingDataObject: nmdc:c2ed82b1b8f5c3aa5ba90cd09a518eec +INFO:root:PassingDataObject: nmdc:bafa1b8d9308c5d4019c1f8496f14334 +INFO:root:PassingDataObject: nmdc:2ebb4f37274cbe580696f9a0b007f61b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:6ff9c447edb9ab7ac019057063dd2002 +ERROR:root:FailedDataObject: nmdc:5cb39ec1f3be2b4b15863d79a35b6087, +ERROR:root:FailedDataObject: nmdc:0990f61a47809e41328f367d425dae21, +ERROR:root:FailedDataObject: nmdc:9da1e6b417176d11568f40cdd1469d76, +ERROR:root:FailedDataObject: nmdc:09f33fa4a6f17b485e8f8de68a1de8e6, +ERROR:root:FailedDataObject: nmdc:008028abb1eaff2bddadd405af689a42, +ERROR:root:FailedDataObject: nmdc:05258eb8b4b6835fe1b064788c36c0e7, +ERROR:root:FailedDataObject: nmdc:c9b9670c64ed0a45ebb4b9be71d56bd0, +ERROR:root:FailedDataObject: nmdc:ea6deeebe40e8312e5ea5d29f61684e4, +ERROR:root:FailedDataObject: nmdc:f5bdf038ee2d9c717b88bea2ad30aa20, +ERROR:root:FailedDataObject: nmdc:1c20a4ed0d5307a0256ecb69c9ed41d4, +ERROR:root:FailedDataObject: nmdc:a5c64bffadee1e37104ccc8afe3637e5, +ERROR:root:FailedDataObject: nmdc:8b250cc792f3e8416b01b7c9711a6705, +ERROR:root:FailedDataObject: nmdc:c707311f7f3f6fb347c800ec8d0f11c9, +ERROR:root:FailedDataObject: nmdc:a63bb2e274a8a2f0d88ac35f56a8f751, +ERROR:root:FailedDataObject: nmdc:aa21b0ed8a68ae737b3342643b3b3c52, +ERROR:root:FailedDataObject: nmdc:058cf93ae25a8eb2534d1a015762254c, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:6ff9c447edb9ab7ac019057063dd2002, Annotation Activity for nmdc:mga0ws6r16 +INFO:root:record: nmdc:57c981b1d9e2a7a7fee4181f7275a959, Annotation Activity for nmdc:mga0vgv058 +INFO:root:PassingDataObject: nmdc:2eda1acaee726b691b8bfdc476a10269 +INFO:root:PassingDataObject: nmdc:cb6ba36073c9dbbcdaad75111511dbce +INFO:root:PassingDataObject: nmdc:4829dc991989e394853983a7e953aebd +INFO:root:PassingDataObject: nmdc:d67014cf91e2ecb609e7ebdf752cc642 +INFO:root:PassingDataObject: nmdc:bc49d9180cd02869a84bbfa10fe0144c +INFO:root:PassingDataObject: nmdc:cb7ed3384ba00d87470b1ba90321d37e +INFO:root:PassingDataObject: nmdc:420fb5f410c437f425c81f6499b873f1 +INFO:root:PassingDataObject: nmdc:ccb4d268c6db01f28bc13f7d4fe08cda +INFO:root:PassingDataObject: nmdc:c840358b5b00826c2fb382101312d072 +INFO:root:PassingDataObject: nmdc:970cdd743f9fa4c76db3a687896086df +INFO:root:PassingDataObject: nmdc:6f88251e137101659cda69b39413233f +INFO:root:PassingDataObject: nmdc:036782e2a6b36892de13ddebe8f8c9cf +INFO:root:PassingDataObject: nmdc:df10b9cc8bf73325d05179a533bdc3d4 +INFO:root:PassingDataObject: nmdc:ea0b9f077f8e21a1ed0dcdebef14a462 +INFO:root:PassingDataObject: nmdc:f24d4ad098ed257073a7e3ef2417d9a3 +INFO:root:PassingDataObject: nmdc:bee2a26f311c312815feee9178666e86 +INFO:root:PassingDataObject: nmdc:5df296ae60f27fe1ad1fc52f2eb87ea1 +INFO:root:PassingDataObject: nmdc:5e12fd15bf2b65611b1ffc6e0f1fb28a +INFO:root:PassingDataObject: nmdc:5cfd8936f32957dda393cc7b576f9032 +INFO:root:PassingDataObject: nmdc:79bbc33df161d149981d40ee12d25712 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:57c981b1d9e2a7a7fee4181f7275a959 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:57c981b1d9e2a7a7fee4181f7275a959, Annotation Activity for nmdc:mga0vgv058 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 3 +INFO:root:set_name: mags_activity_set for gold:Gp0452710 +INFO:root:found 3 records +INFO:root:record: nmdc:030d27b0b825c231aeea9bdd8b2b3f50, MAGs Analysis Activity for nmdc:mga0xvbj60 +INFO:root:PassingDataObject: nmdc:a123311355ccbd2256304aaee0c99fb7 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:030d27b0b825c231aeea9bdd8b2b3f50 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:030d27b0b825c231aeea9bdd8b2b3f50, MAGs Analysis Activity for nmdc:mga0xvbj60 +INFO:root:record: nmdc:6ff9c447edb9ab7ac019057063dd2002, MAGs Analysis Activity for nmdc:mga0ws6r16 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:6ff9c447edb9ab7ac019057063dd2002 +ERROR:root:FailedDataObject: nmdc:9324357f691bfcadd3c1aa5210a4d535, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:6ff9c447edb9ab7ac019057063dd2002, MAGs Analysis Activity for nmdc:mga0ws6r16 +INFO:root:record: nmdc:57c981b1d9e2a7a7fee4181f7275a959, MAGs Analysis Activity for nmdc:mga0vgv058 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:57c981b1d9e2a7a7fee4181f7275a959 +ERROR:root:FailedDataObject: nmdc:76dea1a958dbf913da84620286f8f533, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:57c981b1d9e2a7a7fee4181f7275a959, MAGs Analysis Activity for nmdc:mga0vgv058 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452710 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-5bq15a15 +INFO:root:legacy_id: gold:Gp0452726 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-5bq15a15 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f4d81dc979c76aa85c945731b860fe06 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452726 +INFO:root:found 1 records +INFO:root:record: nmdc:4e93c4c6f4cea856e09c70184c1c316a, Read QC Activity for nmdc:mga0d2r112 +INFO:root:PassingDataObject: nmdc:9658bfdafd93917704b7b47213e6bc2b +INFO:root:PassingDataObject: nmdc:6def84d06d5fa4d1afb3d64f4e78ea66 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452726 +INFO:root:found 1 records +INFO:root:record: nmdc:4e93c4c6f4cea856e09c70184c1c316a, ReadBased Analysis Activity for nmdc:mga0d2r112 +INFO:root:PassingDataObject: nmdc:4c7ba764d2540d1b3d89e6d1cbb2a04e +INFO:root:PassingDataObject: nmdc:cdfd2bf2399e1015f0d47c93ec7c52c2 +INFO:root:PassingDataObject: nmdc:fe77810ae13ffc9decff629e2a5b3ab8 +INFO:root:PassingDataObject: nmdc:809665f9d5c91356dd96bbae1d15e0b3 +INFO:root:PassingDataObject: nmdc:725c9285c5e61671b4217c574ec2dccf +INFO:root:PassingDataObject: nmdc:7e5067b54e3f53f9f3de216821f66a44 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:4e93c4c6f4cea856e09c70184c1c316a +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:4e93c4c6f4cea856e09c70184c1c316a +ERROR:root:FailedDataObject: nmdc:77b88dc37534f0ef900fc3ca6c387c20, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4e93c4c6f4cea856e09c70184c1c316a, ReadBased Analysis Activity for nmdc:mga0d2r112 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452726 +INFO:root:found 1 records +INFO:root:record: nmdc:4e93c4c6f4cea856e09c70184c1c316a, Assembly Activity for nmdc:mga0d2r112 +INFO:root:PassingDataObject: nmdc:5c59e1ff09af28662ffcbe746903e3b6 +INFO:root:PassingDataObject: nmdc:c1505e4eac04e6649f04967de6d87d68 +INFO:root:PassingDataObject: nmdc:c2c1a711aba3e2a96574617d5ef1936f +INFO:root:PassingDataObject: nmdc:34ce19375aed79e26b93d8baddc1f00f +INFO:root:PassingDataObject: nmdc:60ce4eb61fd6d0d113121d11632f351e +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452726 +INFO:root:found 1 records +INFO:root:record: nmdc:4e93c4c6f4cea856e09c70184c1c316a, Annotation Activity for nmdc:mga0d2r112 +INFO:root:PassingDataObject: nmdc:3498a6316c095618458dfda93715c8d3 +INFO:root:PassingDataObject: nmdc:0dcf668c006f305d74a65a12bbc9d8eb +INFO:root:PassingDataObject: nmdc:0fcd0f1f45155f9073bc343a135d201f +INFO:root:PassingDataObject: nmdc:6a31218e921bd2c9c7282c3700c3f3ed +INFO:root:PassingDataObject: nmdc:71e3287617e9399fa1f37a101aafa685 +INFO:root:PassingDataObject: nmdc:b88c0c953f859c1eaacc4338c882ab49 +INFO:root:PassingDataObject: nmdc:ae2530e110846b6c830e8751b8e60bbc +INFO:root:PassingDataObject: nmdc:ac95ef0b7dfe68a487eab9d0885e96c7 +INFO:root:PassingDataObject: nmdc:694c9d3bad547c1712231a8863cc5af3 +INFO:root:PassingDataObject: nmdc:26a07fa72ac7dcd8e0dcc9b72c09b9ed +INFO:root:PassingDataObject: nmdc:ac3e02c80b2a60257377c156e2f6b170 +INFO:root:PassingDataObject: nmdc:bae6cc4ccf78187db5ef0a8703262b69 +INFO:root:PassingDataObject: nmdc:049043357c6688f37d195ac2122951fd +INFO:root:PassingDataObject: nmdc:359d9dab3b1c664042cad149edd8d17e +INFO:root:PassingDataObject: nmdc:448eaf4bf66ff3a8eeed316a546bf1a3 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:4e93c4c6f4cea856e09c70184c1c316a +ERROR:root:FailedDataObject: nmdc:5f6b3014b691af6f5820994bb1d3acf1, +ERROR:root:failing_data_objects: 16 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4e93c4c6f4cea856e09c70184c1c316a, Annotation Activity for nmdc:mga0d2r112 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452726 +INFO:root:found 1 records +INFO:root:record: nmdc:4e93c4c6f4cea856e09c70184c1c316a, MAGs Analysis Activity for nmdc:mga0d2r112 +INFO:root:PassingDataObject: nmdc:44941cf7f6fc19048981a8e6fad2d141 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:4e93c4c6f4cea856e09c70184c1c316a +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4e93c4c6f4cea856e09c70184c1c316a, MAGs Analysis Activity for nmdc:mga0d2r112 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452726 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-jfr88r66 +INFO:root:legacy_id: gold:Gp0452638 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-jfr88r66 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:426a9300a2ddb7850376a293e9f25d93 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:97c11e23186f19849024556a4d837dbc +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452638 +INFO:root:found 2 records +INFO:root:record: nmdc:36f32be10d6d16584f320dfd8c902dda, Read QC Activity for nmdc:mga0nj7r94 +INFO:root:PassingDataObject: nmdc:f8cce3c0eb203a219f62afaa7526b402 +INFO:root:PassingDataObject: nmdc:65a6873d48aaa4efbf9743d6fcf95c39 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:e49fc56b7541422d30be66df159d5b23, Read QC Activity for nmdc:mga04hfg49 +INFO:root:PassingDataObject: nmdc:8654291abda331a1cd6ea3cca1c863d5 +INFO:root:PassingDataObject: nmdc:f034d7041418eb5ec73276f8424498da +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452638 +INFO:root:found 2 records +INFO:root:record: nmdc:36f32be10d6d16584f320dfd8c902dda, ReadBased Analysis Activity for nmdc:mga0nj7r94 +INFO:root:PassingDataObject: nmdc:31ea56eff2afeb427e20c633282e4907 +INFO:root:PassingDataObject: nmdc:265aee9aa787f1b46aa8e45c369b3f8a +INFO:root:PassingDataObject: nmdc:35af12e54751dc2e9a152dc1704100b6 +INFO:root:PassingDataObject: nmdc:ea3131777f1ad0a8e978f51d1dc9d526 +INFO:root:PassingDataObject: nmdc:d5d6498e6addccfaed7183ef461415e9 +INFO:root:PassingDataObject: nmdc:c09004f03a579cceec6296d218d1fd0d +INFO:root:PassingDataObject: nmdc:9dfb99d82bb5b01281ab7655e7dea445 +INFO:root:PassingDataObject: nmdc:9f735e147d4014bdf6d7528b650fde2f +INFO:root:PassingDataObject: nmdc:fc31c1da09b253acb29d0d566823a5c8 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:e49fc56b7541422d30be66df159d5b23, ReadBased Analysis Activity for nmdc:mga04hfg49 +INFO:root:PassingDataObject: nmdc:e59cae2f597f759705cca1bf064e69ea +INFO:root:PassingDataObject: nmdc:58058f0451c33729bf3c13ef2ee4eb3a +INFO:root:PassingDataObject: nmdc:e92db7573090872c3f71406e45326f35 +INFO:root:PassingDataObject: nmdc:828f7e7777a7b672eedf33c9e0039062 +INFO:root:PassingDataObject: nmdc:e9afe157684329797023ea5553aab13f +INFO:root:PassingDataObject: nmdc:5cc55a485e339b3b46b85960d79df805 +INFO:root:PassingDataObject: nmdc:6fcb47976654589de295367460f09298 +INFO:root:PassingDataObject: nmdc:5d16d65e84a625ca655d90288fbe5d68 +INFO:root:PassingDataObject: nmdc:1a9af68ee4e42f636fa0756df85ac87f +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452638 +INFO:root:found 2 records +INFO:root:record: nmdc:36f32be10d6d16584f320dfd8c902dda, Assembly Activity for nmdc:mga0nj7r94 +INFO:root:PassingDataObject: nmdc:db53aec7d57697aac6f14c85c0b27ff1 +INFO:root:PassingDataObject: nmdc:dd10cdf115ad2d48429bf80fb2c88ea8 +INFO:root:PassingDataObject: nmdc:6213e55f3e844c0d1aa8c45ce7e53c4f +INFO:root:PassingDataObject: nmdc:49721578f60ec651eb10c7f9e6c343c2 +INFO:root:PassingDataObject: nmdc:dac6bba28728427aa4f8ee53466d2d96 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:e49fc56b7541422d30be66df159d5b23, Assembly Activity for nmdc:mga04hfg49 +INFO:root:PassingDataObject: nmdc:05c19a3a8e300d544dedb9f613faaf2e +INFO:root:PassingDataObject: nmdc:ea727b1d778ea25136434889fea35403 +INFO:root:PassingDataObject: nmdc:cde17b19afb92d12050533ee28326e90 +INFO:root:PassingDataObject: nmdc:7c950e4475687c7c6433956eb9b90c79 +INFO:root:PassingDataObject: nmdc:89613098202628e346783770c94f6069 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452638 +INFO:root:found 2 records +INFO:root:record: nmdc:36f32be10d6d16584f320dfd8c902dda, Annotation Activity for nmdc:mga0nj7r94 +INFO:root:PassingDataObject: nmdc:df046b423f0e1524a6e4f3c883f2780e +INFO:root:PassingDataObject: nmdc:98ca6d5553435ee8d302da447dfe30df +INFO:root:PassingDataObject: nmdc:0886206b56fc1d80c6e74e076ce91387 +INFO:root:PassingDataObject: nmdc:4ae429124851a4642c7a8b9baa91c753 +INFO:root:PassingDataObject: nmdc:3303e578de2f42acae047313c6f74011 +INFO:root:PassingDataObject: nmdc:ddb78eed06b547725093b522ba04c06c +INFO:root:PassingDataObject: nmdc:ae95bd8dca00f6e5c79153d656956459 +INFO:root:PassingDataObject: nmdc:0e3c5fbe0fb1fb907adb9ded3f4a76f6 +INFO:root:PassingDataObject: nmdc:eaacc5cef85ddb5a54d07d8a1a5ac1ab +INFO:root:PassingDataObject: nmdc:671c72b707bf672148602d42d24649c7 +INFO:root:PassingDataObject: nmdc:4cf03d5d36cf7dd63e11c678dfea8a2e +INFO:root:PassingDataObject: nmdc:c4cdf92671dd961c493773c68c658160 +INFO:root:PassingDataObject: nmdc:6dbea7faa27489a75a0d3cc254a1e489 +INFO:root:PassingDataObject: nmdc:7a1898018e295b096dbafe6cee6f2794 +INFO:root:PassingDataObject: nmdc:90ae62d8165b05e117c2cdcaa6c349a6 +INFO:root:PassingDataObject: nmdc:f70f707efc5c9dba8ccd7521fb504f15 +INFO:root:PassingDataObject: nmdc:56801c5c3a61e813a9cb932c48d83ceb +INFO:root:PassingDataObject: nmdc:ac46924bd4214f3a19c54907eb46e3c2 +INFO:root:PassingDataObject: nmdc:99c9281baaab45ce32d1bd24560baeab +INFO:root:PassingDataObject: nmdc:16fe56fcb289e54a9c9d4c4304f54889 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:36f32be10d6d16584f320dfd8c902dda +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:36f32be10d6d16584f320dfd8c902dda, Annotation Activity for nmdc:mga0nj7r94 +INFO:root:record: nmdc:e49fc56b7541422d30be66df159d5b23, Annotation Activity for nmdc:mga04hfg49 +INFO:root:PassingDataObject: nmdc:e9c43d908abfeec0e86188bb722bc5fb +INFO:root:PassingDataObject: nmdc:06af25126bdac74c645669f8562fdba0 +INFO:root:PassingDataObject: nmdc:e0dc5ac4326b9440cec532e8fdb2301d +INFO:root:PassingDataObject: nmdc:ba2010e83dffd21da909902e63122634 +INFO:root:PassingDataObject: nmdc:de96d78aae4ac327b02f15b20fb8b4f2 +INFO:root:PassingDataObject: nmdc:590921bd8f86a8b191a1e7cea906c6a4 +INFO:root:PassingDataObject: nmdc:db36d33926fba929ad6a70afb2f1011e +INFO:root:PassingDataObject: nmdc:de2a3fbc73392a0e9aa43ca3800869d6 +INFO:root:PassingDataObject: nmdc:bbddae525bbcb3056996e9cfc400dcb4 +INFO:root:PassingDataObject: nmdc:cf7528e2c623a935270f61f2acef140a +INFO:root:PassingDataObject: nmdc:4b9bb1cfad7684b2ef398f155c19a3bc +INFO:root:PassingDataObject: nmdc:bed59fb3b86c99eac0c808cfdb5c0b9e +INFO:root:PassingDataObject: nmdc:202fd72e82b9101e066dc2e585c3970f +INFO:root:PassingDataObject: nmdc:6fdbbd45c7be3cc4d484df006e30c8cc +INFO:root:PassingDataObject: nmdc:804ffecbdff3259e2a4d960342923475 +INFO:root:PassingDataObject: nmdc:1b0576bdbf7582eb906365f10b1ae4bf +INFO:root:PassingDataObject: nmdc:9f803574bcc097b25d3d70f6c5162a9f +INFO:root:PassingDataObject: nmdc:c48879f69b7f10c0fcdc32265c28be86 +INFO:root:PassingDataObject: nmdc:c56d519e8fadb727fd086b0dc7c98d1f +INFO:root:PassingDataObject: nmdc:91b6c348d9f789d06895a13e78c074d3 +INFO:root:PassingDataObject: nmdc:67608e40211a6c51772287e807f4cb3f +INFO:root:PassingDataObject: nmdc:8b1873825b916c703fff0e4e6ab437dd +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452638 +INFO:root:found 2 records +INFO:root:record: nmdc:e49fc56b7541422d30be66df159d5b23, MAGs Analysis Activity for nmdc:mga04hfg49 +INFO:root:PassingDataObject: nmdc:209bda23bc73127d6cac5fc6d229c349 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e49fc56b7541422d30be66df159d5b23 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e49fc56b7541422d30be66df159d5b23, MAGs Analysis Activity for nmdc:mga04hfg49 +INFO:root:record: nmdc:36f32be10d6d16584f320dfd8c902dda, MAGs Analysis Activity for nmdc:mga0nj7r94 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:36f32be10d6d16584f320dfd8c902dda +ERROR:root:FailedDataObject: nmdc:427fdb4e0131c092cc98a236d41f4944, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:36f32be10d6d16584f320dfd8c902dda, MAGs Analysis Activity for nmdc:mga0nj7r94 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452638 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-c9c08373 +INFO:root:legacy_id: gold:Gp0452658 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-c9c08373 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:066c3c3445073cacfe100f368a54fc0a +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452658 +INFO:root:found 1 records +INFO:root:record: nmdc:1da21238d9f677c4ef016e183e6370be, Read QC Activity for nmdc:mga0v9dd72 +INFO:root:PassingDataObject: nmdc:469bc9ded3d59b4e796642971c1f45d7 +INFO:root:PassingDataObject: nmdc:209780ba9618f18d87f2c9f646ab00f5 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452658 +INFO:root:found 1 records +INFO:root:record: nmdc:1da21238d9f677c4ef016e183e6370be, ReadBased Analysis Activity for nmdc:mga0v9dd72 +INFO:root:PassingDataObject: nmdc:47560e05f41eaeb39e80a93a04daec06 +INFO:root:PassingDataObject: nmdc:0175738b370c8b7a227d43952890482b +INFO:root:PassingDataObject: nmdc:5047d77f25cb62c580abdff9df359ceb +INFO:root:PassingDataObject: nmdc:e5a30456f6dcf139c67040ff12f9d77f +INFO:root:PassingDataObject: nmdc:04f49984b628559f172a964d51ee1aea +INFO:root:PassingDataObject: nmdc:10092e9799c0c9159ea0222f6c4b8e3f +INFO:root:PassingDataObject: nmdc:2ccf79e68953a5f5f40dadadec0aab91 +INFO:root:PassingDataObject: nmdc:7750a659b925796c117aec44387108dc +INFO:root:PassingDataObject: nmdc:437a8e39c30f50874cf77808a134630c +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452658 +INFO:root:found 1 records +INFO:root:record: nmdc:1da21238d9f677c4ef016e183e6370be, Assembly Activity for nmdc:mga0v9dd72 +INFO:root:PassingDataObject: nmdc:643c564457387121c53423197b61c308 +INFO:root:PassingDataObject: nmdc:9ace9c51fbb7dc656e4f59b877bdaf5d +INFO:root:PassingDataObject: nmdc:e2d6110cdd0e4ee23ac48e938953a077 +INFO:root:PassingDataObject: nmdc:9002988d49da5c8c05fff8ccde83e3bb +INFO:root:PassingDataObject: nmdc:3310966d9469bc6f39e01a6c1eac7417 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452658 +INFO:root:found 1 records +INFO:root:record: nmdc:1da21238d9f677c4ef016e183e6370be, Annotation Activity for nmdc:mga0v9dd72 +INFO:root:PassingDataObject: nmdc:b825190b38c000694957c623e4c0c423 +INFO:root:PassingDataObject: nmdc:6bab9f5a4a867dac696cfbb0ae5d416e +INFO:root:PassingDataObject: nmdc:1b62e4951bc86f2048059354e519a3df +INFO:root:PassingDataObject: nmdc:f4a148f4e3dbc087fce6eb332d81c2dd +INFO:root:PassingDataObject: nmdc:e183e714bdce195d40fed2cb8dd006e5 +INFO:root:PassingDataObject: nmdc:3a085944f5cedd561fd71f5a087299e5 +INFO:root:PassingDataObject: nmdc:98725007b0f0b1f1f9bb76f3e50d1d95 +INFO:root:PassingDataObject: nmdc:7750d9a8320715c47b6cd9d30b7b76ea +INFO:root:PassingDataObject: nmdc:d47f0096cbcf92c946780417c2d1ae9f +INFO:root:PassingDataObject: nmdc:172aa39c72862a6578f8eb6eb92cd7e5 +INFO:root:PassingDataObject: nmdc:d68270f90370ff23f0b2f7029e9dde78 +INFO:root:PassingDataObject: nmdc:de944a56842b964c640147f2828dd150 +INFO:root:PassingDataObject: nmdc:8610abb0e0693af324187eef0647b862 +INFO:root:PassingDataObject: nmdc:4dac2aee048f55a046ce39a4ede6ab96 +INFO:root:PassingDataObject: nmdc:80b9bbebecdea47e7a15d0cd3c82d02d +INFO:root:PassingDataObject: nmdc:0bcb023f2806f06a7455ee773b4e940e +INFO:root:PassingDataObject: nmdc:3110199a2706fcd0cb81809e624735c1 +INFO:root:PassingDataObject: nmdc:b0084b3d2d2791f3816529719c27b8ec +INFO:root:PassingDataObject: nmdc:14095915378792651cdba42cf6a42367 +INFO:root:PassingDataObject: nmdc:6eaf85b2a5e6c517ee4a264ea4e35bcd +INFO:root:PassingDataObject: nmdc:60aab63d9bfe2e59114893e533d10509 +INFO:root:PassingDataObject: nmdc:e46faf4fd4bab84b823c4c6f2db5b479 +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452658 +INFO:root:found 1 records +INFO:root:record: nmdc:1da21238d9f677c4ef016e183e6370be, MAGs Analysis Activity for nmdc:mga0v9dd72 +INFO:root:PassingDataObject: nmdc:c7d46cf1be40d365879d516f41ef0af9 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1da21238d9f677c4ef016e183e6370be +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1da21238d9f677c4ef016e183e6370be, MAGs Analysis Activity for nmdc:mga0v9dd72 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452658 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-g9debj72 +INFO:root:legacy_id: gold:Gp0452617 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-g9debj72 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:801584ee07cb00f1d14f7107c3c1866b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c36932212686b1e0c9a6418522b4b97d +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452617 +INFO:root:found 2 records +INFO:root:record: nmdc:f113971aad6d5a4240cd91b072bb71f3, Read QC Activity for nmdc:mga08prf49 +INFO:root:PassingDataObject: nmdc:c69fd0066b6c6275132d67fd096a606f +INFO:root:PassingDataObject: nmdc:a91b9d7adfc918dbea870651373422d2 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:65dec1a1afd3418b0ef5f1b4ae757aca, Read QC Activity for nmdc:mga0q4cw38 +INFO:root:PassingDataObject: nmdc:f011795f058c8d973d6374b043549120 +INFO:root:PassingDataObject: nmdc:9e1d4d25ce65ac2b511549466fe342a7 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452617 +INFO:root:found 2 records +INFO:root:record: nmdc:f113971aad6d5a4240cd91b072bb71f3, ReadBased Analysis Activity for nmdc:mga08prf49 +INFO:root:PassingDataObject: nmdc:f3285aeede7c7505f5eaf640bf378683 +INFO:root:PassingDataObject: nmdc:a8bf00c8de63e66867deb0b9cd9e35de +INFO:root:PassingDataObject: nmdc:bf369bd54fd582159eba05cac33d9641 +INFO:root:PassingDataObject: nmdc:bc4e2dc5f58dae593e76a56469d083d3 +INFO:root:PassingDataObject: nmdc:07e95b5941f38bfb7bb19a62c8dfa263 +INFO:root:PassingDataObject: nmdc:4a6c40c66df86d39a64cab61d397351d +INFO:root:PassingDataObject: nmdc:158578bf4e23dd875f02568bd3cfa6c2 +INFO:root:PassingDataObject: nmdc:711e3c8bb45e13d7f7f15115d0ceef04 +INFO:root:PassingDataObject: nmdc:5b356cd7875f260277b2ec3dff2986f3 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:65dec1a1afd3418b0ef5f1b4ae757aca, ReadBased Analysis Activity for nmdc:mga0q4cw38 +INFO:root:PassingDataObject: nmdc:fd37902c583ae21398541ec17d523909 +INFO:root:PassingDataObject: nmdc:a0e0a9b131fa10b9549511afa04c71fd +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:65dec1a1afd3418b0ef5f1b4ae757aca +ERROR:root:FailedDataObject: nmdc:9408b70217ede9846014c4bdf475a054, +ERROR:root:FailedDataObject: nmdc:ac3c3d8a1534acba895b0c651334989d, +ERROR:root:FailedDataObject: nmdc:57c2d0a4e200deba31e8630ff4422e07, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:65dec1a1afd3418b0ef5f1b4ae757aca +ERROR:root:FailedDataObject: nmdc:57ebaeabbdc288b963928a0b729803fb, +ERROR:root:FailedDataObject: nmdc:3c7333648f3ce4600e6d1c0c1e8618ae, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:65dec1a1afd3418b0ef5f1b4ae757aca, ReadBased Analysis Activity for nmdc:mga0q4cw38 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452617 +INFO:root:found 2 records +INFO:root:record: nmdc:f113971aad6d5a4240cd91b072bb71f3, Assembly Activity for nmdc:mga08prf49 +INFO:root:PassingDataObject: nmdc:5088258b811621a287add1a43796036a +INFO:root:PassingDataObject: nmdc:52caca980a8c5628aaad6b06c8a25166 +INFO:root:PassingDataObject: nmdc:009ae1dcda35e1973bd5363ec3656935 +INFO:root:PassingDataObject: nmdc:45a1bca229a8bb6e5000a622cc09bd66 +INFO:root:PassingDataObject: nmdc:eb0b9dcae3963ed54751e23be38926a6 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:65dec1a1afd3418b0ef5f1b4ae757aca, Assembly Activity for nmdc:mga0q4cw38 +INFO:root:PassingDataObject: nmdc:c84c424b4e7d84d3d4f96c4dc03a2963 +INFO:root:PassingDataObject: nmdc:3024f3c9c433171840646e4971deafd1 +INFO:root:PassingDataObject: nmdc:1b5e6f970fdec143c2e7798f658955ab +INFO:root:PassingDataObject: nmdc:8ea805aa5b64a33f7d1236864a30d26d +INFO:root:PassingDataObject: nmdc:a44f7936a675674c1217db2113af6753 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452617 +INFO:root:found 2 records +INFO:root:record: nmdc:65dec1a1afd3418b0ef5f1b4ae757aca, Annotation Activity for nmdc:mga0q4cw38 +INFO:root:PassingDataObject: nmdc:6ae0b71c6c6c4901c199283ca64d841b +INFO:root:PassingDataObject: nmdc:3bc69679b04634ae7850f3e93fa53bd6 +INFO:root:PassingDataObject: nmdc:510d1de85856922a0e97af0e703a576c +INFO:root:PassingDataObject: nmdc:2d5fb89f9f4420f3e9524792c9f03436 +INFO:root:PassingDataObject: nmdc:7ae4d9961f95c5fb2b786fe69302e67b +INFO:root:PassingDataObject: nmdc:99d09d6d81ad54e8ca0c64eb67d84878 +INFO:root:PassingDataObject: nmdc:a5dac8793f6533d13e09852b248d62c1 +INFO:root:PassingDataObject: nmdc:bc645d38bff394cba3d597785dbc2d8c +INFO:root:PassingDataObject: nmdc:f288e5afd364c4778e3569221a8b342a +INFO:root:PassingDataObject: nmdc:71fb684ee5202f113d0764e6d2806986 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:65dec1a1afd3418b0ef5f1b4ae757aca +ERROR:root:failing_data_objects: 10 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:65dec1a1afd3418b0ef5f1b4ae757aca, Annotation Activity for nmdc:mga0q4cw38 +INFO:root:record: nmdc:f113971aad6d5a4240cd91b072bb71f3, Annotation Activity for nmdc:mga08prf49 +INFO:root:PassingDataObject: nmdc:f2d530fa5a8516953c4a35004d583f79 +INFO:root:PassingDataObject: nmdc:db7a6d8d43e2cf349d60c00e9ef57ab6 +INFO:root:PassingDataObject: nmdc:9d10e9bf63f080b884f0967089a659bf +INFO:root:PassingDataObject: nmdc:fcb4ff26cb7e29a49e7ce96ae3632411 +INFO:root:PassingDataObject: nmdc:726ee0c42742d2547f17eb869b47370a +INFO:root:PassingDataObject: nmdc:234626c57fea6d6208cf094a8647db22 +INFO:root:PassingDataObject: nmdc:368e33b3ff4fd042a503dc951fb36ee3 +INFO:root:PassingDataObject: nmdc:de3e9e44ac787c8c5e9580e6242c6bde +INFO:root:PassingDataObject: nmdc:8b46a8fa62b10322ee925951da3fbf23 +INFO:root:PassingDataObject: nmdc:8e3875f67ef38b02933813d3c9925b8c +INFO:root:PassingDataObject: nmdc:5c079fa5cdab1911f43c60bf520f4f7c +INFO:root:PassingDataObject: nmdc:a891a6628bf02d32507b2e244732e1df +INFO:root:PassingDataObject: nmdc:226ecd4b78e756e5ae0b22f9c70a6f5c +INFO:root:PassingDataObject: nmdc:b8b6d550cc63bd69c69f484a195ebb35 +INFO:root:PassingDataObject: nmdc:8d7adcd6abc85710d493e9732cd6d7c1 +INFO:root:PassingDataObject: nmdc:1826c612b80d70571556b35237071016 +INFO:root:PassingDataObject: nmdc:329ee63bca63dda001192ca12bca63d3 +INFO:root:PassingDataObject: nmdc:75208922ddfe564d3d32c2957458fe66 +INFO:root:PassingDataObject: nmdc:984a887a42715d02b757bc0d177e0399 +INFO:root:PassingDataObject: nmdc:36d2571c4c707fa90f0c149c12278566 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:f113971aad6d5a4240cd91b072bb71f3 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f113971aad6d5a4240cd91b072bb71f3, Annotation Activity for nmdc:mga08prf49 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452617 +INFO:root:found 2 records +INFO:root:record: nmdc:f113971aad6d5a4240cd91b072bb71f3, MAGs Analysis Activity for nmdc:mga08prf49 +INFO:root:PassingDataObject: nmdc:33831a8e771d018da47315836960a78b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:f113971aad6d5a4240cd91b072bb71f3 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f113971aad6d5a4240cd91b072bb71f3, MAGs Analysis Activity for nmdc:mga08prf49 +INFO:root:record: nmdc:65dec1a1afd3418b0ef5f1b4ae757aca, MAGs Analysis Activity for nmdc:mga0q4cw38 +INFO:root:PassingDataObject: nmdc:1833099a04d9bbf6a71c5bdfc1355290 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:65dec1a1afd3418b0ef5f1b4ae757aca +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:65dec1a1afd3418b0ef5f1b4ae757aca, MAGs Analysis Activity for nmdc:mga0q4cw38 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452617 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-91xvx168 +INFO:root:legacy_id: gold:Gp0452678 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-91xvx168 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:51b1d76881e7c5021686ea96b57f33e9 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:041bc29a7e81b05f06e392538c6c29b4 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452678 +INFO:root:found 2 records +INFO:root:record: nmdc:aecf7a0e5596d067b62148092a757baa, Read QC Activity for nmdc:mga0vhq959 +INFO:root:PassingDataObject: nmdc:7823250721a0fa2e679c05f8e56c5b3d +INFO:root:PassingDataObject: nmdc:8091256c2fc6d257e3fb16b03f006fa6 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:21d298c0afad3fa6bf5f641ded09b208, Read QC Activity for nmdc:mga05w5k48 +INFO:root:PassingDataObject: nmdc:3c431df78c016a6220bcff26fc4fca99 +INFO:root:PassingDataObject: nmdc:475911c7a32ead7bea18a2b5ca3bc65f +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452678 +INFO:root:found 2 records +INFO:root:record: nmdc:aecf7a0e5596d067b62148092a757baa, ReadBased Analysis Activity for nmdc:mga0vhq959 +INFO:root:PassingDataObject: nmdc:eb84b729bc81890087a133f2871e26cf +INFO:root:PassingDataObject: nmdc:dcccf875f4872c4cf6e80959313aae2d +INFO:root:PassingDataObject: nmdc:209c751cf7bd4e9fb7b7b08d4ad82fb1 +INFO:root:PassingDataObject: nmdc:52f74233d1351f40440f96e91e675b7f +INFO:root:PassingDataObject: nmdc:b230a53d2af9ec84d7abda88e8d91d49 +INFO:root:PassingDataObject: nmdc:71144788f6d593968c3cf1260b6803bd +INFO:root:PassingDataObject: nmdc:59bad58b102dda832a77cf72284351c6 +INFO:root:PassingDataObject: nmdc:8de3a0477af40de788ee66010c9e03e2 +INFO:root:PassingDataObject: nmdc:fc968f11e2b018f2e501f43d2814a988 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:21d298c0afad3fa6bf5f641ded09b208, ReadBased Analysis Activity for nmdc:mga05w5k48 +INFO:root:PassingDataObject: nmdc:4810c2632ca448e80de430599f0c46a5 +INFO:root:PassingDataObject: nmdc:65332c00375ddd1f226fb31ddecf921d +INFO:root:PassingDataObject: nmdc:96a58388650d043a1af887bb12760bba +INFO:root:PassingDataObject: nmdc:f7ab03a39b6609ce278e0e3f51faa8a9 +INFO:root:PassingDataObject: nmdc:bff65ea2db1aae7a2625be499ddbb75b +INFO:root:PassingDataObject: nmdc:3586fc9d6b40ff07f6c77724cfbabd9f +INFO:root:PassingDataObject: nmdc:f5aa84417520156844ef92ee30b2c9a9 +INFO:root:PassingDataObject: nmdc:ee58b22e0392e57035a715b72961c5e6 +INFO:root:PassingDataObject: nmdc:d7440667a19e8fc6a90fbfb3a054365d +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452678 +INFO:root:found 2 records +INFO:root:record: nmdc:aecf7a0e5596d067b62148092a757baa, Assembly Activity for nmdc:mga0vhq959 +INFO:root:PassingDataObject: nmdc:5f2059c1e45064402ca0be2ee7fd993e +INFO:root:PassingDataObject: nmdc:9a4a64ba70ac1bf67cb2074fb80ac519 +INFO:root:PassingDataObject: nmdc:cea2c55da2b69baf913f39e62a3d4634 +INFO:root:PassingDataObject: nmdc:9e1d4d514817622ec6d03fd29f12e082 +INFO:root:PassingDataObject: nmdc:beb1536793be1023f3e6f534e35c991f +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:21d298c0afad3fa6bf5f641ded09b208, Assembly Activity for nmdc:mga05w5k48 +INFO:root:PassingDataObject: nmdc:cfd98633f32026d1eac3e4c73dd5b6e6 +INFO:root:PassingDataObject: nmdc:0f37d16eafebfe419d90ed55a9695f81 +INFO:root:PassingDataObject: nmdc:3474985232d1b5431f8c9ae24e74d136 +INFO:root:PassingDataObject: nmdc:7bd018e4d6eacb415b1c8886b1327667 +INFO:root:PassingDataObject: nmdc:0ff00d682644eb162f572c7cf8847d46 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452678 +INFO:root:found 2 records +INFO:root:record: nmdc:aecf7a0e5596d067b62148092a757baa, Annotation Activity for nmdc:mga0vhq959 +INFO:root:PassingDataObject: nmdc:7f2afcc81a8b29937680e7bf620fcdc1 +INFO:root:PassingDataObject: nmdc:5f86989689043a1f1eb7e68ff317c28e +INFO:root:PassingDataObject: nmdc:d66dc5ce14de557d5fdd86cdee0c1db2 +INFO:root:PassingDataObject: nmdc:b24d2e09dbf1e4ad78caee2454d67813 +INFO:root:PassingDataObject: nmdc:273d653ce72f79500f13a2dbc053c861 +INFO:root:PassingDataObject: nmdc:2830002b249f6c0f4a1f14027ba99f68 +INFO:root:PassingDataObject: nmdc:c09489bfe7ed9188f5541a20b114e972 +INFO:root:PassingDataObject: nmdc:930440dafba6d31429d87363cad7adf6 +INFO:root:PassingDataObject: nmdc:da3d763a4b9c7a70c3ab3d4f106100f9 +INFO:root:PassingDataObject: nmdc:ea6d3fc6fd249f2cf71687f7cb7c22c3 +INFO:root:PassingDataObject: nmdc:3f5271a1d8229f16985043e7218925f6 +INFO:root:PassingDataObject: nmdc:86f6ef65be3f93b374195e96b1b17306 +INFO:root:PassingDataObject: nmdc:0fa8c31b8d106847e1f707c76be0625a +INFO:root:PassingDataObject: nmdc:74caadd1f109ab13a382a1b9f6dce358 +INFO:root:PassingDataObject: nmdc:004d40c3adad6c0cc413ce68c367362a +INFO:root:PassingDataObject: nmdc:0ad4c339879d3a6b0b6157f8fd1cf1da +INFO:root:PassingDataObject: nmdc:962e6047feeb799e4f4f54f3cdc2409a +INFO:root:PassingDataObject: nmdc:e25e07037a21cbc567e7976e86bae892 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:aecf7a0e5596d067b62148092a757baa +ERROR:root:FailedDataObject: nmdc:05b26eb3ea0cf784ebb7fedd8b2db894, +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:aecf7a0e5596d067b62148092a757baa, Annotation Activity for nmdc:mga0vhq959 +INFO:root:record: nmdc:21d298c0afad3fa6bf5f641ded09b208, Annotation Activity for nmdc:mga05w5k48 +INFO:root:PassingDataObject: nmdc:027775236c62887e8113a188cf91c852 +INFO:root:PassingDataObject: nmdc:df236df82fea8902bb47b42f274a2684 +INFO:root:PassingDataObject: nmdc:97c11a40a36405b0b38810ba4b4ffdf8 +INFO:root:PassingDataObject: nmdc:56666423dc8ec2ea2eae861f640e3209 +INFO:root:PassingDataObject: nmdc:d14fc6db3dbbc0d32540712ef6fcd7b0 +INFO:root:PassingDataObject: nmdc:f2555185aba329bd2f34e98886cd7ef0 +INFO:root:PassingDataObject: nmdc:86d0eca6b9bc51d450d2df99c401bd13 +INFO:root:PassingDataObject: nmdc:10ed62b3884d0b2d748bc548da75598b +INFO:root:PassingDataObject: nmdc:21bc33fac5c3ae6508bf12e5a2345db6 +INFO:root:PassingDataObject: nmdc:ea3fe3e5daf8cf4a063896e9eba65885 +INFO:root:PassingDataObject: nmdc:e6f4607fce2a44af4ef59be2ac02df4d +INFO:root:PassingDataObject: nmdc:9979d0a75a9e4926f0b0d663df2a98bb +INFO:root:PassingDataObject: nmdc:8682a5b905e4acca932fdf2809413892 +INFO:root:PassingDataObject: nmdc:56dff86662c21c3b3edb5de1870c9220 +INFO:root:PassingDataObject: nmdc:6424e2e4bea3b3b00565285ea71783d4 +INFO:root:PassingDataObject: nmdc:0d4872926cf57921681852ef2b73dcab +INFO:root:PassingDataObject: nmdc:0931634c583aed5bcc7651c74fdaa12d +INFO:root:PassingDataObject: nmdc:9b8c7d8982488d237ef540aa1a390f61 +INFO:root:PassingDataObject: nmdc:60095a521dfd2e63b057ec7226318e2e +INFO:root:PassingDataObject: nmdc:aa65e307947f74015701b49abb137fac +INFO:root:PassingDataObject: nmdc:fb7cb14f8b7e38f4c16dfcb389b00ca7 +INFO:root:PassingDataObject: nmdc:c2c14dc7ffd17c6ab3ca7c76e93bdc7b +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452678 +INFO:root:found 2 records +INFO:root:record: nmdc:aecf7a0e5596d067b62148092a757baa, MAGs Analysis Activity for nmdc:mga0vhq959 +INFO:root:PassingDataObject: nmdc:93953699b49330705f484dd8d30d5bba +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:aecf7a0e5596d067b62148092a757baa +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:aecf7a0e5596d067b62148092a757baa, MAGs Analysis Activity for nmdc:mga0vhq959 +INFO:root:record: nmdc:21d298c0afad3fa6bf5f641ded09b208, MAGs Analysis Activity for nmdc:mga05w5k48 +INFO:root:PassingDataObject: nmdc:318675437a3c33a18a755f2f9a7b9bd4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:21d298c0afad3fa6bf5f641ded09b208 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:21d298c0afad3fa6bf5f641ded09b208, MAGs Analysis Activity for nmdc:mga05w5k48 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452678 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-5wjf9309 +INFO:root:legacy_id: gold:Gp0452672 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-5wjf9309 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d1d2ba3a263e6c9bff40183e75651066 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7cf722750e14a16a15ea62c1d2cfd737 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a3c825c3b07ab6aece01113a9916a86f +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452672 +INFO:root:found 3 records +INFO:root:record: nmdc:1b3a54e2afd46ff9a395948182c814b6, Read QC Activity for nmdc:mga0yp0094 +INFO:root:PassingDataObject: nmdc:d86f04e955eab8d091287ff8bf2df327 +INFO:root:PassingDataObject: nmdc:163686eb30a0073cc74629b6dd418bb1 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:1c975468ff948dbf6403b85f2cfd699f, Read QC Activity for nmdc:mga0vnbd66 +INFO:root:PassingDataObject: nmdc:5cc97a66fa019632c79df85b7e8be23f +INFO:root:PassingDataObject: nmdc:905ddb243233969b03802d0a9230f42d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:e987de52be3e8e842b6748937c9973db, Read QC Activity for nmdc:mga02djr83 +INFO:root:PassingDataObject: nmdc:3b0509b3478f23a6c55f74aab9808252 +INFO:root:PassingDataObject: nmdc:ab0a7c3344947e32f472e841147be8f7 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452672 +INFO:root:found 3 records +INFO:root:record: nmdc:1b3a54e2afd46ff9a395948182c814b6, ReadBased Analysis Activity for nmdc:mga0yp0094 +INFO:root:PassingDataObject: nmdc:7c25081792ffbafef3acac5419dc16e7 +INFO:root:PassingDataObject: nmdc:82da9745685a46f705c317d22b184be9 +INFO:root:PassingDataObject: nmdc:e8a102dd813653cff8b648e3c8fc75a4 +INFO:root:PassingDataObject: nmdc:cde8b8f939eb9ba310535120fec74db7 +INFO:root:PassingDataObject: nmdc:b7d9c78c5296c417f19e3a19283ab343 +INFO:root:PassingDataObject: nmdc:0bb80ae7b7e738929f901ff6373b2014 +INFO:root:PassingDataObject: nmdc:630aa28a1b4e489101358c32c2d02354 +INFO:root:PassingDataObject: nmdc:163e3bdca3a56dbb1b9aa20e26689c97 +INFO:root:PassingDataObject: nmdc:f738e049bdd4a73943ce39bfdb425d6f +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:e987de52be3e8e842b6748937c9973db, ReadBased Analysis Activity for nmdc:mga02djr83 +INFO:root:PassingDataObject: nmdc:a13d2162dce37c4abe10bf13844488c8 +INFO:root:PassingDataObject: nmdc:c0a4f6f58d7f425236c2a05c94183b28 +INFO:root:PassingDataObject: nmdc:d90a108d475f724aee38dd3fcc7bc6f0 +INFO:root:PassingDataObject: nmdc:c9f5cda71319189607a5b24f2e9b4471 +INFO:root:PassingDataObject: nmdc:f21e25b7c0f2e1bd6aea6f961cec41ca +INFO:root:PassingDataObject: nmdc:bd00c989c359e3966a8cddd31da465e7 +INFO:root:PassingDataObject: nmdc:e6a4b3dec36538d70b27c7f2729974a0 +INFO:root:PassingDataObject: nmdc:92f943565899ecf21fdc4305eb521b6a +INFO:root:PassingDataObject: nmdc:d629d3b2d4002fc0fb8d7a47548ada6e +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:1c975468ff948dbf6403b85f2cfd699f, ReadBased Analysis Activity for nmdc:mga0vnbd66 +INFO:root:PassingDataObject: nmdc:fbece988510780735dbdd03710b46694 +INFO:root:PassingDataObject: nmdc:a8d00334c550846456f48269dbc9f559 +INFO:root:PassingDataObject: nmdc:a348979debd878f38951210042708d32 +INFO:root:PassingDataObject: nmdc:5abf0ba8ad7fe7d5cf5e698bbca5db0f +INFO:root:PassingDataObject: nmdc:9d681175937dea01ae87a7a853da397c +INFO:root:PassingDataObject: nmdc:18200c8efedee622567b44182e37ec36 +INFO:root:PassingDataObject: nmdc:2ad0bfbd04da84177feaa3e7e19fa4b4 +INFO:root:PassingDataObject: nmdc:e19904324da296a063682288ee0091d4 +INFO:root:PassingDataObject: nmdc:0ee2d1a074e415167e2ca3f1d589aa40 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452672 +INFO:root:found 3 records +INFO:root:record: nmdc:1b3a54e2afd46ff9a395948182c814b6, Assembly Activity for nmdc:mga0yp0094 +INFO:root:PassingDataObject: nmdc:54f586c38ec2bb7f9154c7b33e429cd8 +INFO:root:PassingDataObject: nmdc:da89f115159c865c154a162ce35b9fcf +INFO:root:PassingDataObject: nmdc:42f6edb83fc6a46b3e3401021d6e6828 +INFO:root:PassingDataObject: nmdc:161e996ea63a42dc200d0fa4766b1b10 +INFO:root:PassingDataObject: nmdc:fa1cca5f2aa3bdf7ab765c1039a22254 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:e987de52be3e8e842b6748937c9973db, Assembly Activity for nmdc:mga02djr83 +INFO:root:PassingDataObject: nmdc:f1ead2a018575879a487187a4fad4365 +INFO:root:PassingDataObject: nmdc:465136d30da4503a3b26e7c1f234d655 +INFO:root:PassingDataObject: nmdc:402637be36782dd8bb496e472976bc7f +INFO:root:PassingDataObject: nmdc:8ee64188484702b044031ef7abe7ba63 +INFO:root:PassingDataObject: nmdc:bb2ebdc91be15af4f9d1edadf84b5eb7 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:1c975468ff948dbf6403b85f2cfd699f, Assembly Activity for nmdc:mga0vnbd66 +INFO:root:PassingDataObject: nmdc:ee659d9d72361a068fccb511eda8ee49 +INFO:root:PassingDataObject: nmdc:e97508b1161ce48a9fa3fb2b82fe9ae0 +INFO:root:PassingDataObject: nmdc:e0383c9ae39cd553cf1161271dea5eab +INFO:root:PassingDataObject: nmdc:1f3c3b185a7fe65ac1cddd34790bd459 +INFO:root:PassingDataObject: nmdc:8f081d7ffe6b199ca6198475042d8916 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452672 +INFO:root:found 3 records +INFO:root:record: nmdc:1b3a54e2afd46ff9a395948182c814b6, Annotation Activity for nmdc:mga0yp0094 +INFO:root:PassingDataObject: nmdc:8b2db3cb39135859ac87b610695bc631 +INFO:root:PassingDataObject: nmdc:44ecfadbdf17fb1dc6ddf0936b62d989 +INFO:root:PassingDataObject: nmdc:3d766941da83bc614c5b97ca87e466e0 +INFO:root:PassingDataObject: nmdc:80e73557d1a5e5bfc21482f8f9a43d30 +INFO:root:PassingDataObject: nmdc:7586a6f6aacc8d68eb72d40378f36393 +INFO:root:PassingDataObject: nmdc:a5974d8e28ce2582b9579d4fe1ecde67 +INFO:root:PassingDataObject: nmdc:69064a8dc390d8f2da7b109ea6f413e1 +INFO:root:PassingDataObject: nmdc:7bc60fb049a55e046ae8f40cad2825d1 +INFO:root:PassingDataObject: nmdc:bb550a43055e43b53f9f68b4c3f2e55c +INFO:root:PassingDataObject: nmdc:5466183d48d16984536fe7d63779b16a +INFO:root:PassingDataObject: nmdc:d241dd9383e0d2ffc39d0b3a2855646a +INFO:root:PassingDataObject: nmdc:95c7adbfc292b521d14cdf1f37e09283 +INFO:root:PassingDataObject: nmdc:72c504ceb35d4d1c1e2af71fadafe51b +INFO:root:PassingDataObject: nmdc:1670369ef5aabee24058c88997e066ab +INFO:root:PassingDataObject: nmdc:cf1f25692353ee1ec199431d410a1d61 +INFO:root:PassingDataObject: nmdc:f89e52665e9a184f99b7247945e864b9 +INFO:root:PassingDataObject: nmdc:4ea3a721eaecbdfa00fcfc9cf9e2ffa9 +INFO:root:PassingDataObject: nmdc:51d5d8e4d4ec7e8ef6f7056d13508a41 +INFO:root:PassingDataObject: nmdc:c0ae53d864e4e95bdce8ea08db2b6f52 +INFO:root:PassingDataObject: nmdc:0005b1ce5e3a4dda7aac8aeb97277a07 +INFO:root:PassingDataObject: nmdc:84ad8a87efeb41112eeedde84e121e82 +INFO:root:PassingDataObject: nmdc:95e15f3c8a9425b2b5a4579a195a1fdb +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:e987de52be3e8e842b6748937c9973db, Annotation Activity for nmdc:mga02djr83 +INFO:root:PassingDataObject: nmdc:122de83c7139391026f59ee3fee27959 +INFO:root:PassingDataObject: nmdc:444413081421ece39ed2ce6ecb0692ff +INFO:root:PassingDataObject: nmdc:9f07045f637e6ebd434c9dda31813243 +INFO:root:PassingDataObject: nmdc:602cd88b6d1d487cc3dcc2a303c09b50 +INFO:root:PassingDataObject: nmdc:a50247b0ef3db4cc577c43c72f9d3112 +INFO:root:PassingDataObject: nmdc:9b35ee1ff95a4d056c61ac9af01e0af2 +INFO:root:PassingDataObject: nmdc:faded8ff4002dba4262b909f9fca6c8a +INFO:root:PassingDataObject: nmdc:38b8251e68bc2e4a595bd414f59b9534 +INFO:root:PassingDataObject: nmdc:df11bdef19bb2167e67b050d5c6b6906 +INFO:root:PassingDataObject: nmdc:95736e0244150932b1d30d5316ee3974 +INFO:root:PassingDataObject: nmdc:64f6d86d2bf60ea8cba3a3c4463ddd7a +INFO:root:PassingDataObject: nmdc:cc410b5a6d1467906dec92e433550254 +INFO:root:PassingDataObject: nmdc:07149460621eb203f1175a75cc58c1d0 +INFO:root:PassingDataObject: nmdc:37e75ddf8add7d11973fbe5b0b1b5238 +INFO:root:PassingDataObject: nmdc:e05e75ea9a37fda7d8e3d41e82287e0d +INFO:root:PassingDataObject: nmdc:35ebdc15375c76ba00ec4bb35ed5f581 +INFO:root:PassingDataObject: nmdc:56c8c93c4924c145baaf05daeacf7a54 +INFO:root:PassingDataObject: nmdc:4210dd0247fbdedad1a3b7ade82f3128 +INFO:root:PassingDataObject: nmdc:b196843a0bbdd2bbc63abcd2013e32e7 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:e987de52be3e8e842b6748937c9973db +ERROR:root:FailedDataObject: nmdc:ea3138ddaafe5905eb67c55f144e0526, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e987de52be3e8e842b6748937c9973db, Annotation Activity for nmdc:mga02djr83 +INFO:root:record: nmdc:1c975468ff948dbf6403b85f2cfd699f, Annotation Activity for nmdc:mga0vnbd66 +INFO:root:PassingDataObject: nmdc:7b6d42aad348450322bbd938a6538fb7 +INFO:root:PassingDataObject: nmdc:dd15b92a6d44d1b0fa321823eb7e3812 +INFO:root:PassingDataObject: nmdc:68a2f86044bf69a115cfc03f1c019c1e +INFO:root:PassingDataObject: nmdc:63267931b3488bc912767465e224b4f5 +INFO:root:PassingDataObject: nmdc:514c7c9b8bf29f04f8b43bd80e589a42 +INFO:root:PassingDataObject: nmdc:464a124e56ebf2b7236e6e0756eabe47 +INFO:root:PassingDataObject: nmdc:07296cde66b57b4972efb9c20830e1a0 +INFO:root:PassingDataObject: nmdc:5ce0235f7ba22340877b7c6d17e29b78 +INFO:root:PassingDataObject: nmdc:90e4ca3e8c41759ee4cf515f5e116500 +INFO:root:PassingDataObject: nmdc:8cc095a30ceb2fc84d71043a1f1be908 +INFO:root:PassingDataObject: nmdc:1854a0d1e18fe0b99dd3b7f6caadf070 +INFO:root:PassingDataObject: nmdc:0343120e5e46d7892ae1064016e66b63 +INFO:root:PassingDataObject: nmdc:e36097e2895ac2160f214b788c96365d +INFO:root:PassingDataObject: nmdc:728fe258364bd1415d716b25ab24fc4a +INFO:root:PassingDataObject: nmdc:e60152ed106d8f317f2ba0f3270565a1 +INFO:root:PassingDataObject: nmdc:5095cb126eabe92d0aeae02064a42aeb +INFO:root:PassingDataObject: nmdc:313160fb9b5267d9f4d035b9fbeda376 +INFO:root:PassingDataObject: nmdc:da7791aec9fa967ba28aab03e7fb65c2 +INFO:root:PassingDataObject: nmdc:12af19a490eb46114789eaa67b3b2034 +INFO:root:PassingDataObject: nmdc:c764c721a84ef611cbdb95553536fdb7 +INFO:root:PassingDataObject: nmdc:b2c3f5e009b80cc7219f426f8382b2dd +INFO:root:PassingDataObject: nmdc:332ea6144e30d1a918f28c3dddfbdb92 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452672 +INFO:root:found 3 records +INFO:root:record: nmdc:1b3a54e2afd46ff9a395948182c814b6, MAGs Analysis Activity for nmdc:mga0yp0094 +INFO:root:PassingDataObject: nmdc:54e4b86c1f92762c75d8f611680f6dcf +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1b3a54e2afd46ff9a395948182c814b6 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1b3a54e2afd46ff9a395948182c814b6, MAGs Analysis Activity for nmdc:mga0yp0094 +INFO:root:record: nmdc:e987de52be3e8e842b6748937c9973db, MAGs Analysis Activity for nmdc:mga02djr83 +INFO:root:PassingDataObject: nmdc:4fcd82a69db2d7329e4bf77c6183992d +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e987de52be3e8e842b6748937c9973db +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e987de52be3e8e842b6748937c9973db, MAGs Analysis Activity for nmdc:mga02djr83 +INFO:root:record: nmdc:1c975468ff948dbf6403b85f2cfd699f, MAGs Analysis Activity for nmdc:mga0vnbd66 +INFO:root:PassingDataObject: nmdc:46f83e0872b998d0ab5bcf2061b6b825 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1c975468ff948dbf6403b85f2cfd699f +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1c975468ff948dbf6403b85f2cfd699f, MAGs Analysis Activity for nmdc:mga0vnbd66 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452672 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-j3rye385 +INFO:root:legacy_id: gold:Gp0618759 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-j3rye385 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9cacf6957f49114b827e06b029dff60b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0618759 +INFO:root:found 1 records +INFO:root:record: nmdc:bcbba7dd1a807f88440f49abad76519f, Read QC Activity for nmdc:mga0ws1859 +INFO:root:PassingDataObject: nmdc:b66038361afb7826f34c7b266fbefdb5 +INFO:root:PassingDataObject: nmdc:3a089152b2e2003da7b1af59c8e0aac2 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0618759 +INFO:root:found 1 records +INFO:root:record: nmdc:bcbba7dd1a807f88440f49abad76519f, ReadBased Analysis Activity for nmdc:mga0ws1859 +INFO:root:PassingDataObject: nmdc:a810f55f09db30911abbfc3b39eecaa9 +INFO:root:PassingDataObject: nmdc:e4625eea29a1e0e11e2cad0d3acb3087 +INFO:root:PassingDataObject: nmdc:d91830806d75fc9f0f973eafb4588cf3 +INFO:root:PassingDataObject: nmdc:e3f98d9cd0b462ea0abb81efbf120b47 +INFO:root:PassingDataObject: nmdc:c74ca117a9d7d7535ab79c8a6764280b +INFO:root:PassingDataObject: nmdc:b22e2d4607c807220d5db94d495f22ac +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:bcbba7dd1a807f88440f49abad76519f +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:bcbba7dd1a807f88440f49abad76519f +ERROR:root:FailedDataObject: nmdc:c9b3dad2db70eea40599b4dc8c97b662, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bcbba7dd1a807f88440f49abad76519f, ReadBased Analysis Activity for nmdc:mga0ws1859 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0618759 +INFO:root:found 1 records +INFO:root:record: nmdc:bcbba7dd1a807f88440f49abad76519f, Assembly Activity for nmdc:mga0ws1859 +INFO:root:PassingDataObject: nmdc:218252ca61d1ce05cbb60ddab21de22b +INFO:root:PassingDataObject: nmdc:3c80fcb4fae428e93a97ea35029c449c +INFO:root:PassingDataObject: nmdc:4f16cf70f6a6cefbd22d380e4d66cfd6 +INFO:root:PassingDataObject: nmdc:ab1fa96f87cc3bbcfdd95c9dcc0171b6 +INFO:root:PassingDataObject: nmdc:e0a8f6879102933e48ba415c76ffe417 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0618759 +INFO:root:found 1 records +INFO:root:record: nmdc:bcbba7dd1a807f88440f49abad76519f, Annotation Activity for nmdc:mga0ws1859 +INFO:root:PassingDataObject: nmdc:eb23000e8e213d51b9db1d5baa5db701 +INFO:root:PassingDataObject: nmdc:4029b0449c3a6fc935a99250219937be +INFO:root:PassingDataObject: nmdc:4b179364610058ab52502b51169bdfd4 +INFO:root:PassingDataObject: nmdc:5ddc11ec27507466bcd5e15b061d58aa +INFO:root:PassingDataObject: nmdc:29c89fc8b5ea090cdd39442fd26299f9 +INFO:root:PassingDataObject: nmdc:9ec583013d9b7b26dfceff2039b434d2 +INFO:root:PassingDataObject: nmdc:c8444e88d546aa7a6b0402caf88d695f +INFO:root:PassingDataObject: nmdc:9356e16d5e96ffa36a804cf49979769b +INFO:root:PassingDataObject: nmdc:a7223e24a5883659f90f9dbb66d7e776 +INFO:root:PassingDataObject: nmdc:852ef370d62a1926ce78afae7373e8f6 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:bcbba7dd1a807f88440f49abad76519f +ERROR:root:FailedDataObject: nmdc:783586d0367c59bc5dfc826ea4926d50, +ERROR:root:failing_data_objects: 11 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bcbba7dd1a807f88440f49abad76519f, Annotation Activity for nmdc:mga0ws1859 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0618759 +INFO:root:found 1 records +INFO:root:record: nmdc:bcbba7dd1a807f88440f49abad76519f, MAGs Analysis Activity for nmdc:mga0ws1859 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:bcbba7dd1a807f88440f49abad76519f +ERROR:root:FailedDataObject: nmdc:970cec5001e6adc00c5e72a2b44b5d37, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bcbba7dd1a807f88440f49abad76519f, MAGs Analysis Activity for nmdc:mga0ws1859 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0618759 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-w9eawn78 +INFO:root:legacy_id: gold:Gp0452546 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-w9eawn78 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8a48685bf37c3ff59224a86f4fbae38c +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2a04dc8096cbeb3805197e2da00b03a3 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452546 +INFO:root:found 2 records +INFO:root:record: nmdc:e252377bbf3f8a5aae8725f7316e73f3, Read QC Activity for nmdc:mga0zjtm83 +INFO:root:PassingDataObject: nmdc:1bf96b18f16b3bcf088e4f5990094637 +INFO:root:PassingDataObject: nmdc:e61e592cc9cdcdcdb57f4a251bf64b6a +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:b6f9ad118ca7d04f945cd432363ebc49, Read QC Activity for nmdc:mga01tbe80 +INFO:root:PassingDataObject: nmdc:91fed9b222f6929314c6871f99c0a1ff +INFO:root:PassingDataObject: nmdc:e73803fe27deb8071370be4b7e9bd42b +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452546 +INFO:root:found 2 records +INFO:root:record: nmdc:e252377bbf3f8a5aae8725f7316e73f3, ReadBased Analysis Activity for nmdc:mga0zjtm83 +INFO:root:PassingDataObject: nmdc:7ce3975ea275d5110772ac8ab2317a0a +INFO:root:PassingDataObject: nmdc:10b9122237d1e6d96e6e70be7893527c +INFO:root:PassingDataObject: nmdc:4c9fcc91b69a4be70d070d8b75756eff +INFO:root:PassingDataObject: nmdc:51122ca2ce050d13325b3055b119a42d +INFO:root:PassingDataObject: nmdc:45616c23ec7eb63c95c7fd494970eb1d +INFO:root:PassingDataObject: nmdc:4c721a9804331b479d2337fa77ad6995 +INFO:root:PassingDataObject: nmdc:112fe3ecc6c629dc25628243eb1f6827 +INFO:root:PassingDataObject: nmdc:a627f8452624fa05f2e2b64fe3fab9aa +INFO:root:PassingDataObject: nmdc:2852d2d25440f6f2932adb6861e2b362 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:b6f9ad118ca7d04f945cd432363ebc49, ReadBased Analysis Activity for nmdc:mga01tbe80 +INFO:root:PassingDataObject: nmdc:045899a79d543e41d1d8b2e4fcef35e6 +INFO:root:PassingDataObject: nmdc:ab2417058d349cd84fa2afa0a2538060 +INFO:root:PassingDataObject: nmdc:21a80ad36276d63324c54b894bfdf7dc +INFO:root:PassingDataObject: nmdc:e5a74caeb8f4ec6f8aeed1b59d42548e +INFO:root:PassingDataObject: nmdc:93fad0fd57e18bc4c8347bb739938271 +INFO:root:PassingDataObject: nmdc:73e947f8585c86f4292c60461953e710 +INFO:root:PassingDataObject: nmdc:26ec08800b0749088fe703ae30594a38 +INFO:root:PassingDataObject: nmdc:6d8210171378432a98ee381f9b98452c +INFO:root:PassingDataObject: nmdc:127e3b6688f9972f7e7c379ac9531ca7 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452546 +INFO:root:found 2 records +INFO:root:record: nmdc:e252377bbf3f8a5aae8725f7316e73f3, Assembly Activity for nmdc:mga0zjtm83 +INFO:root:PassingDataObject: nmdc:7f2c85c97811fe6e8cf4578e24599a63 +INFO:root:PassingDataObject: nmdc:539f436e1edb3ceb1e5f0a7d50147a83 +INFO:root:PassingDataObject: nmdc:cc2e93439c73faba9eb42c311ce9e59d +INFO:root:PassingDataObject: nmdc:85fd5ccbd2089832c52f83853d2aeb1c +INFO:root:PassingDataObject: nmdc:d615cbd175bc4e93971f8a97d615c6d8 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:b6f9ad118ca7d04f945cd432363ebc49, Assembly Activity for nmdc:mga01tbe80 +INFO:root:PassingDataObject: nmdc:8a7930caf67a9d94486b6b23c3c856c7 +INFO:root:PassingDataObject: nmdc:4c3d9a4ae53b95d2373c503d59873b99 +INFO:root:PassingDataObject: nmdc:dfc3b3df1daae31bdd6307f19161df37 +INFO:root:PassingDataObject: nmdc:37d2f0d6029951483d357bd1f91df65e +INFO:root:PassingDataObject: nmdc:5205756757e1102769126e43aa88350b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452546 +INFO:root:found 2 records +INFO:root:record: nmdc:e252377bbf3f8a5aae8725f7316e73f3, Annotation Activity for nmdc:mga0zjtm83 +INFO:root:PassingDataObject: nmdc:16929faab45124b7cdeea4c9f4894c66 +INFO:root:PassingDataObject: nmdc:632c2b5e69a5911db6454cee71d766e2 +INFO:root:PassingDataObject: nmdc:688ea4957fce83ac8aaeb44b99b8db2e +INFO:root:PassingDataObject: nmdc:f200c384fd8b469285bbe84e35529444 +INFO:root:PassingDataObject: nmdc:476d8c7743ffd6f35d60a4ef3caef1a2 +INFO:root:PassingDataObject: nmdc:328cbd953654628bb4a84489d0a49512 +INFO:root:PassingDataObject: nmdc:35c60fe8290e5d1ae59bdfcd3944b165 +INFO:root:PassingDataObject: nmdc:01e6b13a57f068bfb1062150259306f7 +INFO:root:PassingDataObject: nmdc:919d6ef93b07e3aa284b00fe71d0f389 +INFO:root:PassingDataObject: nmdc:2bfabd5de699bb0d61c47e432a2559a2 +INFO:root:PassingDataObject: nmdc:99c7f83e1c069cf2e26a0459388a49b5 +INFO:root:PassingDataObject: nmdc:0cda5ce946cd47088caedf6cf69eaa09 +INFO:root:PassingDataObject: nmdc:1273cfa9ab38182e0db839867dc85a5e +INFO:root:PassingDataObject: nmdc:7bc13f6a615b33f0ea06461004955a5b +INFO:root:PassingDataObject: nmdc:e95b4f7fb0cdea07df606dd646ebdb19 +INFO:root:PassingDataObject: nmdc:f5b7a4b3a2bb866de1e6fe0502e0fff1 +INFO:root:PassingDataObject: nmdc:14fd54b15246522b2b7d0eae90f6eee9 +INFO:root:PassingDataObject: nmdc:de2f41d929062534fcdf83b373cd9bc5 +INFO:root:PassingDataObject: nmdc:2ede0a736eed3d6d7ba0c2f780400b93 +INFO:root:PassingDataObject: nmdc:00dba58ff02f962583da5bddbfd23490 +INFO:root:PassingDataObject: nmdc:12ec505145f05fd97ffcc3aa16df3f12 +INFO:root:PassingDataObject: nmdc:b3df0b1efb22c321d662c865ee8519d3 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:b6f9ad118ca7d04f945cd432363ebc49, Annotation Activity for nmdc:mga01tbe80 +INFO:root:PassingDataObject: nmdc:36d220964a961c7e8ee1e51bbc5c6ae8 +INFO:root:PassingDataObject: nmdc:264e65eedf1c85153d1d6b78b13958c7 +INFO:root:PassingDataObject: nmdc:a76bbb08784436b2f099e641dd544a1f +INFO:root:PassingDataObject: nmdc:eec3f0a45d5a38abd5375f326800787a +INFO:root:PassingDataObject: nmdc:9a7968d0ea09a0d5d2693d80cd1cfc44 +INFO:root:PassingDataObject: nmdc:6735ab6e502ef0cb216e14dc7aacdd45 +INFO:root:PassingDataObject: nmdc:18eebb5b2530ea6ffa0921393ea417bc +INFO:root:PassingDataObject: nmdc:1ad929a27ad5884b243ccdcf355e83f6 +INFO:root:PassingDataObject: nmdc:3f531cefa505cb2aa963d68b77cc6080 +INFO:root:PassingDataObject: nmdc:879d5974607d1cf05eccc6b01fcb9548 +INFO:root:PassingDataObject: nmdc:8d427d2566f84195e7e7626ba81420a4 +INFO:root:PassingDataObject: nmdc:cbad3773a9d9bdaf237d4944cd3f1841 +INFO:root:PassingDataObject: nmdc:2f73dca491e1e11f9c70edb281a4f4cb +INFO:root:PassingDataObject: nmdc:4317fb3fa7dab381599b962d0bb21530 +INFO:root:PassingDataObject: nmdc:45207debe6a10c34b3b55b1e0cdb0df5 +INFO:root:PassingDataObject: nmdc:accf7eae828a9301d590f91cd74cc4f8 +INFO:root:PassingDataObject: nmdc:ab247a7c8c8a97de82f2894ad3245ebb +INFO:root:PassingDataObject: nmdc:db6c682f8b9229c3b163a23891d3cc14 +INFO:root:PassingDataObject: nmdc:74efad7d4a6c7995dd50208b01eed61c +INFO:root:PassingDataObject: nmdc:a501786ebdf2e0a9ba417185e4cef58d +INFO:root:PassingDataObject: nmdc:f8ad088b9efa42eeb7bd89b90090cf3d +INFO:root:PassingDataObject: nmdc:7811701f50771b463d4fafcb50767a0d +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452546 +INFO:root:found 2 records +INFO:root:record: nmdc:e252377bbf3f8a5aae8725f7316e73f3, MAGs Analysis Activity for nmdc:mga0zjtm83 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e252377bbf3f8a5aae8725f7316e73f3 +ERROR:root:FailedDataObject: nmdc:24c49d5ee72e354c4b5387ef654c5617, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e252377bbf3f8a5aae8725f7316e73f3, MAGs Analysis Activity for nmdc:mga0zjtm83 +INFO:root:record: nmdc:b6f9ad118ca7d04f945cd432363ebc49, MAGs Analysis Activity for nmdc:mga01tbe80 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:b6f9ad118ca7d04f945cd432363ebc49 +ERROR:root:FailedDataObject: nmdc:746d6a96455ba2875c68859b404eb1e7, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b6f9ad118ca7d04f945cd432363ebc49, MAGs Analysis Activity for nmdc:mga01tbe80 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452546 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-f1n62c07 +INFO:root:legacy_id: gold:Gp0452745 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-f1n62c07 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ae843613378d50d746e4287aa4253139 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:308fcfbf30bfe8166b39c782a2a1b8b6 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452745 +INFO:root:found 2 records +INFO:root:record: nmdc:16b52d19a42ad9c1edf92ae4195df359, Read QC Activity for nmdc:mga0pfj814 +INFO:root:PassingDataObject: nmdc:410f775f3da893dcefa72b1c299e60b5 +INFO:root:PassingDataObject: nmdc:3cab938139c287edb97aef0d9e10dfb3 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:b48cb33bfaa86f1c86d48e2f707f5a09, Read QC Activity for nmdc:mga0z8vk58 +INFO:root:PassingDataObject: nmdc:dcf88d29fe81eb53e082e9beb8466872 +INFO:root:PassingDataObject: nmdc:e698270a5f982ccbaa886df021a60dae +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452745 +INFO:root:found 2 records +INFO:root:record: nmdc:16b52d19a42ad9c1edf92ae4195df359, ReadBased Analysis Activity for nmdc:mga0pfj814 +INFO:root:PassingDataObject: nmdc:6bcec8de67011de7f65a3691d3b47617 +INFO:root:PassingDataObject: nmdc:fa99a07efa07d15c71cbe69103fa8775 +INFO:root:PassingDataObject: nmdc:3ed004ff5bef2c968d6a90986229712f +INFO:root:PassingDataObject: nmdc:b3e9a7e41dda9f99f900b46f4df5d02e +INFO:root:PassingDataObject: nmdc:8cca70ad4f1f8dfb44616fbcaea732cb +INFO:root:PassingDataObject: nmdc:03fb879202400ace81e2906267864b35 +INFO:root:PassingDataObject: nmdc:8d17834c885c914bba9b746e1fb1c977 +INFO:root:PassingDataObject: nmdc:44024eda48a991e3dbef1b270931f8ab +INFO:root:PassingDataObject: nmdc:eb401174735ff4f98b8dbf7e61e7dc96 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:b48cb33bfaa86f1c86d48e2f707f5a09, ReadBased Analysis Activity for nmdc:mga0z8vk58 +INFO:root:PassingDataObject: nmdc:0c12b66782f5d5a2db24bb46987a1778 +INFO:root:PassingDataObject: nmdc:22732745ba8f317466de3d3cee294def +INFO:root:PassingDataObject: nmdc:54603809623a9e3101e0589c5a2f8811 +INFO:root:PassingDataObject: nmdc:c816fa87300156a4b45370ab8bd9d971 +INFO:root:PassingDataObject: nmdc:fe062ce64540dcdf3ec08b519fa796f8 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:b48cb33bfaa86f1c86d48e2f707f5a09 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:b48cb33bfaa86f1c86d48e2f707f5a09 +ERROR:root:FailedDataObject: nmdc:09fc96bc9e578f6f5d626453b5e11617, +ERROR:root:FailedDataObject: nmdc:208362258567b98869c70f4a3c0ea8a2, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b48cb33bfaa86f1c86d48e2f707f5a09, ReadBased Analysis Activity for nmdc:mga0z8vk58 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452745 +INFO:root:found 2 records +INFO:root:record: nmdc:b48cb33bfaa86f1c86d48e2f707f5a09, Assembly Activity for nmdc:mga0z8vk58 +INFO:root:PassingDataObject: nmdc:0e83f016e91a12a3a503be59a8d5a491 +INFO:root:PassingDataObject: nmdc:f18664367859496ded7d9dcd04f2268a +INFO:root:PassingDataObject: nmdc:8ec8cc62efe7c832f9ddaf6ce1182115 +INFO:root:PassingDataObject: nmdc:b6aceb2ce9f105a9e21aac23b211dc76 +INFO:root:PassingDataObject: nmdc:7c1ad0568c2361304a04da7ff0aa27f8 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:16b52d19a42ad9c1edf92ae4195df359, Assembly Activity for nmdc:mga0pfj814 +INFO:root:PassingDataObject: nmdc:0dd7b69281fb88c17a983f2db1678fd8 +INFO:root:PassingDataObject: nmdc:b68575faa6089784c761901f6168d9cb +INFO:root:PassingDataObject: nmdc:8724638cf1e8b00ffda640be676b9ba3 +INFO:root:PassingDataObject: nmdc:ab9e14287188eb66021181135b0eb85c +INFO:root:PassingDataObject: nmdc:85aa3b9fb66c3d42400a59e9e0799714 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452745 +INFO:root:found 2 records +INFO:root:record: nmdc:16b52d19a42ad9c1edf92ae4195df359, Annotation Activity for nmdc:mga0pfj814 +INFO:root:PassingDataObject: nmdc:5364d4759bbbe9aa891d0d161f098e0e +INFO:root:PassingDataObject: nmdc:71698efefb80eb97159333fef9928771 +INFO:root:PassingDataObject: nmdc:fc22490a7522d3f87422a86b40185958 +INFO:root:PassingDataObject: nmdc:e92550599703d1a4716bc6234b3f364c +INFO:root:PassingDataObject: nmdc:0cdf50b2edbd0fcf9c7eb8aff20ac83e +INFO:root:PassingDataObject: nmdc:79c01a2072cc8340fa36f14086f91d9d +INFO:root:PassingDataObject: nmdc:37c7e03fff84b6217b68a97e40b6f8ea +INFO:root:PassingDataObject: nmdc:1be2c6edee910caca6f33599c2f95b67 +INFO:root:PassingDataObject: nmdc:f67a79ca8bc6744ea35546bafbd75217 +INFO:root:PassingDataObject: nmdc:7109acaa3100f0a11d5090635740855e +INFO:root:PassingDataObject: nmdc:fcd9f5c94109677632df52d65ed552bb +INFO:root:PassingDataObject: nmdc:b77f1ce31a716cec0be0a2d71e691a01 +INFO:root:PassingDataObject: nmdc:39e825e21cdb7c2150f65c4dc63319bb +INFO:root:PassingDataObject: nmdc:af7af70a16341790af9edf8199fe0286 +INFO:root:PassingDataObject: nmdc:89f74eacb67f421370581baf2c8527b3 +INFO:root:PassingDataObject: nmdc:337f4e8fb82fdd0ff10a743941c70d93 +INFO:root:PassingDataObject: nmdc:2aa1c2b6ec0b9ba151df187653fc77a0 +INFO:root:PassingDataObject: nmdc:b35307f36f527e2b101c81a0e70b7b1a +INFO:root:PassingDataObject: nmdc:084c2afe56f9f9296a72d8bf0360777b +INFO:root:PassingDataObject: nmdc:1b9fbd8031d3349c7a0ba13d3b01e35d +INFO:root:PassingDataObject: nmdc:042a0376a61b9767ab0b3c3faed10dcd +INFO:root:PassingDataObject: nmdc:17681a3eb22cb1199949f515afecb82b +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:b48cb33bfaa86f1c86d48e2f707f5a09, Annotation Activity for nmdc:mga0z8vk58 +INFO:root:PassingDataObject: nmdc:0f190e87a04089cd6b1e4c92f1b90f76 +INFO:root:PassingDataObject: nmdc:02c4719f9eaf4ff81f4c8a81b860e88a +INFO:root:PassingDataObject: nmdc:f696e48780622c7ffa99a9bdf6a631d5 +INFO:root:PassingDataObject: nmdc:0c46bc25a4d51c9203385031f711dfbf +INFO:root:PassingDataObject: nmdc:1d5d9351e621b2eb608a5bf27c71c2dd +INFO:root:PassingDataObject: nmdc:0a4b00a74d043411b6be7cd92dbeef95 +INFO:root:PassingDataObject: nmdc:32be993d9d8b56a71ed0382dc20a67b0 +INFO:root:PassingDataObject: nmdc:e018cdc6f2d2fc6f68451bb9422b0662 +INFO:root:PassingDataObject: nmdc:4ad3dc7a0bd94c886b728446c58fee81 +INFO:root:PassingDataObject: nmdc:9a311dfe949fe19876e14b47829e0fb3 +INFO:root:PassingDataObject: nmdc:9c8a8b58c8665dbf408ac1b406a8ef36 +INFO:root:PassingDataObject: nmdc:c38aebdde7a952e660c0b37a8bda09b6 +INFO:root:PassingDataObject: nmdc:6896541f577a52c656a9e1474a69ddd8 +INFO:root:PassingDataObject: nmdc:7b46c25aa8ed5cfc52263c52fc74ab39 +INFO:root:PassingDataObject: nmdc:a9d061aca316ba5cd639b34ff96ad948 +INFO:root:PassingDataObject: nmdc:9fbc2a4fdedfd0fdf14a457e0ad78e83 +INFO:root:PassingDataObject: nmdc:9f0dede331dcefbac316d44d3b9e3a90 +INFO:root:PassingDataObject: nmdc:fd2d8f4f00e5ee334aee1340d3292bc5 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:b48cb33bfaa86f1c86d48e2f707f5a09 +ERROR:root:FailedDataObject: nmdc:981f4209156d79f70d718a08e443561c, +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b48cb33bfaa86f1c86d48e2f707f5a09, Annotation Activity for nmdc:mga0z8vk58 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452745 +INFO:root:found 2 records +INFO:root:record: nmdc:16b52d19a42ad9c1edf92ae4195df359, MAGs Analysis Activity for nmdc:mga0pfj814 +INFO:root:PassingDataObject: nmdc:68f9a9a9e546b2078e097f947a27f919 +INFO:root:PassingDataObject: nmdc:417ee9bb7ecb1625a3c77d2dfcccc657 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:b48cb33bfaa86f1c86d48e2f707f5a09, MAGs Analysis Activity for nmdc:mga0z8vk58 +INFO:root:PassingDataObject: nmdc:998d19f635a6e4c48e6f13d005840aed +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:b48cb33bfaa86f1c86d48e2f707f5a09 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b48cb33bfaa86f1c86d48e2f707f5a09, MAGs Analysis Activity for nmdc:mga0z8vk58 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452745 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-t8z1cc46 +INFO:root:legacy_id: gold:Gp0452628 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-t8z1cc46 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:953e00e35ac7f2fe0e6732922dcc5cdc +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7c4f9a2893957afc68abd927704b8940 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:e86f95625d17b547a593cf444857a2f2 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6f82dacc65f21fd2e12a4acdc0dc0e14 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452628 +INFO:root:found 4 records +INFO:root:record: nmdc:32e27928eb531e9b390e448886ceed80, Read QC Activity for nmdc:mga0ddf261 +INFO:root:PassingDataObject: nmdc:a7168a95387e7cf55d50d0df87a822ad +INFO:root:PassingDataObject: nmdc:55476e84852bd34c6796fa0a3df4c254 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:fe5f0d8cee2d9ff0c8848447c1ea8fc5, Read QC Activity for nmdc:mga0903a72 +INFO:root:PassingDataObject: nmdc:645a1845cf23a0f161ee479f43d4bf9b +INFO:root:PassingDataObject: nmdc:5bae361eb958e5f342f9ab1eb8e51f8a +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb, Read QC Activity for nmdc:mga03m4k71 +INFO:root:PassingDataObject: nmdc:a0018de01e4445021be4947075d97bf0 +INFO:root:PassingDataObject: nmdc:757745e498cdb1e1620c4fab45ceea8f +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:f93b8b137971c19a3c60e39d2e021e7e, Read QC Activity for nmdc:mga0c71q29 +INFO:root:PassingDataObject: nmdc:f53480149c65973073d3d0368df9bd6b +INFO:root:PassingDataObject: nmdc:d4df7df74816cb377a8d6d233064c2b7 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452628 +INFO:root:found 4 records +INFO:root:record: nmdc:32e27928eb531e9b390e448886ceed80, ReadBased Analysis Activity for nmdc:mga0ddf261 +INFO:root:PassingDataObject: nmdc:c434666e12c23562b74d8e525f7c36ea +INFO:root:PassingDataObject: nmdc:a610dbc49ecaf10aba20083bb7cf73c4 +INFO:root:PassingDataObject: nmdc:7797ee1e1a9e0664401f8b2d9b7af6ec +INFO:root:PassingDataObject: nmdc:046bd6ae927f9f26d7d4c5e7f50598dd +INFO:root:PassingDataObject: nmdc:457ec14467830b7f4217f2068931d7f0 +INFO:root:PassingDataObject: nmdc:f2027da994ce1731134a411c9e062e27 +INFO:root:PassingDataObject: nmdc:4403f9adaf81a826386971e8a501953e +INFO:root:PassingDataObject: nmdc:80a5251897e298712d6ea7036ee49d74 +INFO:root:PassingDataObject: nmdc:2ec33c797975678c3c2468722fadb416 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb, ReadBased Analysis Activity for nmdc:mga03m4k71 +INFO:root:PassingDataObject: nmdc:eb1fa6efe313903a7ec6e05f8d341af3 +INFO:root:PassingDataObject: nmdc:3ff9e4adb2c7cd387fda2d0a2013e032 +INFO:root:PassingDataObject: nmdc:528eba2b9821785ed57e539c8c398a7f +INFO:root:PassingDataObject: nmdc:409ffa43d4b3227f0628e986ce1b656a +INFO:root:PassingDataObject: nmdc:a8e398d8950e7ec3673aaddeebd21680 +INFO:root:PassingDataObject: nmdc:774aa08abc2eb37eef76916c30698079 +INFO:root:PassingDataObject: nmdc:59d4772aa3c60de0d57a0f2c56ccee69 +INFO:root:PassingDataObject: nmdc:eb94e0720b59a3938ab039019535f298 +INFO:root:PassingDataObject: nmdc:83f1aaa31a1db32ed6315adeef28dda0 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:fe5f0d8cee2d9ff0c8848447c1ea8fc5, ReadBased Analysis Activity for nmdc:mga0903a72 +INFO:root:PassingDataObject: nmdc:4b6a3d92913b3d5180fe3fff24bffbe0 +INFO:root:PassingDataObject: nmdc:45f9d8f57ea61c6512d64a9b6f274c26 +INFO:root:PassingDataObject: nmdc:89b84f8a034d789c0d4735688416c5d7 +INFO:root:PassingDataObject: nmdc:aa43832d9fd049df8a919c9d609f6ce0 +INFO:root:PassingDataObject: nmdc:7da45b95b6fe2c3315a8d473d4c27ea4 +INFO:root:PassingDataObject: nmdc:6bc3658388eacaa7bc3a0c4cf3dee77d +INFO:root:PassingDataObject: nmdc:b29d18da528a1b449d0d556a63dbf458 +INFO:root:PassingDataObject: nmdc:1bad7031ff7131a7ed084f255781d6f7 +INFO:root:PassingDataObject: nmdc:a3cd5fcc819ca4958ea9e988ade2d56f +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:f93b8b137971c19a3c60e39d2e021e7e, ReadBased Analysis Activity for nmdc:mga0c71q29 +INFO:root:PassingDataObject: nmdc:2cb93afe95c8057c6a1fd696be743021 +INFO:root:PassingDataObject: nmdc:dad39a02a3dab8a48495693d0841525c +INFO:root:PassingDataObject: nmdc:be2eafcad85e819114e2462eb8d7b5f8 +INFO:root:PassingDataObject: nmdc:e7444876a145f75227278f144ef5a8f0 +INFO:root:PassingDataObject: nmdc:4f9125483b8e0efd4e05fa5a7011adda +INFO:root:PassingDataObject: nmdc:35b286aed8e927456e5775e55eaf121f +INFO:root:PassingDataObject: nmdc:9f36e79a4c22f9297c9ae036a12f38ae +INFO:root:PassingDataObject: nmdc:324fa3f128cf167174b4559521b174e5 +INFO:root:PassingDataObject: nmdc:99180b2576473dc5081ec7db2182a1f7 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 4 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452628 +INFO:root:found 4 records +INFO:root:record: nmdc:32e27928eb531e9b390e448886ceed80, Assembly Activity for nmdc:mga0ddf261 +INFO:root:PassingDataObject: nmdc:e3974e09bb2df03aa6286d00b83ec799 +INFO:root:PassingDataObject: nmdc:c5e5ebe240e9429aa12ac8ee8d38b2ca +INFO:root:PassingDataObject: nmdc:c7c78728978a994baed7d4794ef4de89 +INFO:root:PassingDataObject: nmdc:d0766711e12c8e98f51808f1c79aed61 +INFO:root:PassingDataObject: nmdc:ab8a01d21f10adf446f4c233cbb6c8f2 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:fe5f0d8cee2d9ff0c8848447c1ea8fc5, Assembly Activity for nmdc:mga0903a72 +INFO:root:PassingDataObject: nmdc:34062fa6c2db467d542d81cd2b4d3283 +INFO:root:PassingDataObject: nmdc:524babce5a64a433746943eb6de0e418 +INFO:root:PassingDataObject: nmdc:3d019d5d04d959b9822087d32492e3ab +INFO:root:PassingDataObject: nmdc:d16bd3ebdfe6a0f227ff3bc05d9c5d0b +INFO:root:PassingDataObject: nmdc:d23ca4bed523b445e72f7bd781dc4689 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb, Assembly Activity for nmdc:mga03m4k71 +INFO:root:PassingDataObject: nmdc:51689904ee2e689f06f68127463a8f52 +INFO:root:PassingDataObject: nmdc:c502b4d3cd92ca6f61a868d25f8d75d7 +INFO:root:PassingDataObject: nmdc:63e5d600ac5283c7bd9d182789130a07 +INFO:root:PassingDataObject: nmdc:774e41dd80762140e63e4629679fe150 +INFO:root:PassingDataObject: nmdc:55ee734ca60fc49d03be113b6d1be1a4 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:f93b8b137971c19a3c60e39d2e021e7e, Assembly Activity for nmdc:mga0c71q29 +INFO:root:PassingDataObject: nmdc:88f74b9c4dffec0cea4c2e4ad19ce534 +INFO:root:PassingDataObject: nmdc:b2dfa16817e72b1b304b9879364c064c +INFO:root:PassingDataObject: nmdc:e772a6c6fdcecd495aee148fa91ead51 +INFO:root:PassingDataObject: nmdc:f7c2cdf875292643a50a526e0e482af1 +INFO:root:PassingDataObject: nmdc:0c3550dc21ead43e1edfdac97b1b3ea1 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452628 +INFO:root:found 4 records +INFO:root:record: nmdc:32e27928eb531e9b390e448886ceed80, Annotation Activity for nmdc:mga0ddf261 +INFO:root:PassingDataObject: nmdc:79875d06a425bb0d87eb3874e1d0dfcc +INFO:root:PassingDataObject: nmdc:652e24fe4dd79627dec174366b3e4570 +INFO:root:PassingDataObject: nmdc:bfdb71c31b4f77730a930823238cdbff +INFO:root:PassingDataObject: nmdc:88df7586d9469208131578a65564962e +INFO:root:PassingDataObject: nmdc:5f672139b3779ce1c1a3b2abf073f2f7 +INFO:root:PassingDataObject: nmdc:4c7eb3157c91296fbcf017533c7e2a66 +INFO:root:PassingDataObject: nmdc:ecc871a6d91ff82d2694e589cc9e9e6c +INFO:root:PassingDataObject: nmdc:a2ed051f907be0dd39151e4c6ac7af77 +INFO:root:PassingDataObject: nmdc:2fd289703da45758a41b53290c2ac9f7 +INFO:root:PassingDataObject: nmdc:06c98858b0da1866afd7e43184995a88 +INFO:root:PassingDataObject: nmdc:6d2bf2398c0a57e3c29478c28cfac899 +INFO:root:PassingDataObject: nmdc:a94fae79ed176f4a454ddc631b844c30 +INFO:root:PassingDataObject: nmdc:c24fa62e7010c096893550f4ae414261 +INFO:root:PassingDataObject: nmdc:29bbb0861079ffeb9806211c56e64d81 +INFO:root:PassingDataObject: nmdc:7a6fceb6dbff020e175835d120b38289 +INFO:root:PassingDataObject: nmdc:089aed9079981bb701cbbdc168852985 +INFO:root:PassingDataObject: nmdc:70e1b8ef3043f4c6c043fdae8f6755bd +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:32e27928eb531e9b390e448886ceed80 +ERROR:root:FailedDataObject: nmdc:f8080385651b592180591eed7489076f, +ERROR:root:FailedDataObject: nmdc:724252bbc14dfce0dba99a3393ebfc64, +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:32e27928eb531e9b390e448886ceed80, Annotation Activity for nmdc:mga0ddf261 +INFO:root:record: nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb, Annotation Activity for nmdc:mga03m4k71 +INFO:root:PassingDataObject: nmdc:babb07da0337750f0bf03d1fda0b376a +INFO:root:PassingDataObject: nmdc:2c459a1fdedff8cf232b5452f4ee8a3a +INFO:root:PassingDataObject: nmdc:14bff2ec2fe66f4f6b893f731e4f72b9 +INFO:root:PassingDataObject: nmdc:51c1b7a6c10046deb8b9ab0b67218639 +INFO:root:PassingDataObject: nmdc:599ac550890f3de5410686623b091191 +INFO:root:PassingDataObject: nmdc:5ccb581d7fe5bc02d3ce4ff8e9aa93f7 +INFO:root:PassingDataObject: nmdc:e161d809293f40ce87acf7d8d0529610 +INFO:root:PassingDataObject: nmdc:ad8b2f2886ecf4782bba9d32769e6e49 +INFO:root:PassingDataObject: nmdc:8aad4a613ed38755cf9ba9bc2d2497b5 +INFO:root:PassingDataObject: nmdc:5ec2b6b682e5e6acd3515e4a905b6e1a +INFO:root:PassingDataObject: nmdc:ee368c2e75717ab9bb4c18ede62de6b1 +INFO:root:PassingDataObject: nmdc:eb31048427463196be623279b80ebe89 +INFO:root:PassingDataObject: nmdc:6b6475464c84cdb0c7c7dbb9bb66edea +INFO:root:PassingDataObject: nmdc:35acc943559af37b2a7f25e606f3dda1 +INFO:root:PassingDataObject: nmdc:83e27354e31e3e370cf1651478c138c7 +INFO:root:PassingDataObject: nmdc:eae7da94cf6ba403570eddef2ba68673 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb +ERROR:root:FailedDataObject: nmdc:aead8c20f19500d65f408e8104bd6659, +ERROR:root:FailedDataObject: nmdc:a7abfc32c60d0b026f00734330c09f25, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb, Annotation Activity for nmdc:mga03m4k71 +INFO:root:record: nmdc:fe5f0d8cee2d9ff0c8848447c1ea8fc5, Annotation Activity for nmdc:mga0903a72 +INFO:root:PassingDataObject: nmdc:0f34ab8637971fe76df7bcc9a36a87d1 +INFO:root:PassingDataObject: nmdc:ba76dc09ef9ea03073071358b24633ea +INFO:root:PassingDataObject: nmdc:231335d16a0e0419b440ad6bc3fcc8df +INFO:root:PassingDataObject: nmdc:d1a4e0cf049378d38b227f809d3c864a +INFO:root:PassingDataObject: nmdc:72d6df7bd433e65f0677c0453d00a5c0 +INFO:root:PassingDataObject: nmdc:24b6088764ad1ba80f354cfddaaa4a0a +INFO:root:PassingDataObject: nmdc:0fde0f3ae5aba5b0c37454a70abe3ff4 +INFO:root:PassingDataObject: nmdc:ebd04fbbe812fcf1059f47bca455a1f9 +INFO:root:PassingDataObject: nmdc:11269974c3c581f816ca2b725316f85a +INFO:root:PassingDataObject: nmdc:bf52859c7cc32e7ed7b2ff53c6978029 +INFO:root:PassingDataObject: nmdc:37cfec60214f8d787fc751252dbce4cc +INFO:root:PassingDataObject: nmdc:cab3959f83cb98265f72f7db013d9afe +INFO:root:PassingDataObject: nmdc:cc6cf96ff5f0ef2c647bdbae63e50bba +INFO:root:PassingDataObject: nmdc:eb5b417d1c0f759c7a9ad7b7bc8fec7c +INFO:root:PassingDataObject: nmdc:92c2fb2d97261aa0806bc51ffbd64f0c +INFO:root:PassingDataObject: nmdc:8a9b722ed6986a265227e135f50217a2 +INFO:root:PassingDataObject: nmdc:329ebcb6bd53a70ef4821b4a48f043b3 +INFO:root:PassingDataObject: nmdc:c983ccb0819b6ac8904891cc758effcd +INFO:root:PassingDataObject: nmdc:e6d448703736f615d874973fc797d39b +INFO:root:PassingDataObject: nmdc:6feda02c818caa18b3eeec12d98303b1 +INFO:root:PassingDataObject: nmdc:1791d6b5fc84fdf6dd74cf342f73302a +INFO:root:PassingDataObject: nmdc:d16dd265cd2fc0e3f3e2dc1c7d98feb8 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:f93b8b137971c19a3c60e39d2e021e7e, Annotation Activity for nmdc:mga0c71q29 +INFO:root:PassingDataObject: nmdc:d2f49dceed95e604940d0bc4958cf02d +INFO:root:PassingDataObject: nmdc:270d1538438139f4a6ff73b3faaf20da +INFO:root:PassingDataObject: nmdc:38eecd062552143f78973199684d8d42 +INFO:root:PassingDataObject: nmdc:74d11429a1986637a873e69209c66697 +INFO:root:PassingDataObject: nmdc:5631cde67b7ba83eaea80341d20fce8e +INFO:root:PassingDataObject: nmdc:376b56da728589bc4ad3fb4b5bb98e8f +INFO:root:PassingDataObject: nmdc:ad40c03ccf2f70d7bc8b77a6c76b91c9 +INFO:root:PassingDataObject: nmdc:7cb869a9c41ca96f5be79d4db8a9e8aa +INFO:root:PassingDataObject: nmdc:a377e4b06f0bc0946777e97778baa83a +INFO:root:PassingDataObject: nmdc:75ade5f055d5c1bd920ad52f2ccb8a5f +INFO:root:PassingDataObject: nmdc:9aff628727f017dc20b1609eaf0f94b1 +INFO:root:PassingDataObject: nmdc:c244febaebc1dfdb3668f29ceea31a13 +INFO:root:PassingDataObject: nmdc:62dfc9401b764b9c8cc0472f8f99f112 +INFO:root:PassingDataObject: nmdc:7a4c968410f38174bdfdc2f2e363f69a +INFO:root:PassingDataObject: nmdc:2db1a258407ccdf983c132095582741e +INFO:root:PassingDataObject: nmdc:6542eda12d107e1ea48af30d0d4f3697 +INFO:root:PassingDataObject: nmdc:87fa9af49fb6a8d6986e9376bda125c8 +INFO:root:PassingDataObject: nmdc:176aae72c2a053312bdab4526d259598 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:f93b8b137971c19a3c60e39d2e021e7e +ERROR:root:FailedDataObject: nmdc:ef9c6d7553af1a42f82989ffd7490f3c, +ERROR:root:FailedDataObject: nmdc:bebb10b71af131788c522e3ef4cf8785, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f93b8b137971c19a3c60e39d2e021e7e, Annotation Activity for nmdc:mga0c71q29 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 3 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452628 +INFO:root:found 4 records +INFO:root:record: nmdc:32e27928eb531e9b390e448886ceed80, MAGs Analysis Activity for nmdc:mga0ddf261 +INFO:root:PassingDataObject: nmdc:f26ddc1f77938bb751cb330933956745 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:32e27928eb531e9b390e448886ceed80 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:32e27928eb531e9b390e448886ceed80, MAGs Analysis Activity for nmdc:mga0ddf261 +INFO:root:record: nmdc:fe5f0d8cee2d9ff0c8848447c1ea8fc5, MAGs Analysis Activity for nmdc:mga0903a72 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fe5f0d8cee2d9ff0c8848447c1ea8fc5 +ERROR:root:FailedDataObject: nmdc:14216e41e08e5e021c3ddea9329e7184, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fe5f0d8cee2d9ff0c8848447c1ea8fc5, MAGs Analysis Activity for nmdc:mga0903a72 +INFO:root:record: nmdc:f93b8b137971c19a3c60e39d2e021e7e, MAGs Analysis Activity for nmdc:mga0c71q29 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:f93b8b137971c19a3c60e39d2e021e7e +ERROR:root:FailedDataObject: nmdc:1cfc60fad1497c7fd73941bb083d7450, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f93b8b137971c19a3c60e39d2e021e7e, MAGs Analysis Activity for nmdc:mga0c71q29 +INFO:root:record: nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb, MAGs Analysis Activity for nmdc:mga03m4k71 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb +ERROR:root:FailedDataObject: nmdc:1ebae4fbad5911defb7c87d70efae214, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb, MAGs Analysis Activity for nmdc:mga03m4k71 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452628 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-75458r71 +INFO:root:legacy_id: gold:Gp0452553 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-75458r71 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:cb803b18964c9370a4c2261d29a72fbb +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:43cf30fae24adfea08ad1b0abfcb73ce +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452553 +INFO:root:found 2 records +INFO:root:record: nmdc:e57a496e78e25188f86efc03e7fa59a9, Read QC Activity for nmdc:mga09aej88 +INFO:root:PassingDataObject: nmdc:d5b67904aa25ed2306ae7cbf782b0978 +INFO:root:PassingDataObject: nmdc:7224a1f97b1df4c5987a31b3abf78ecc +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:5043d72cc886ce2e5d15f619ec124c9a, Read QC Activity for nmdc:mga0hhgs46 +INFO:root:PassingDataObject: nmdc:ea4d4aa5b410af5b1b33d21b87cc9f75 +INFO:root:PassingDataObject: nmdc:82fcdc05b323b23874518fd0d960856a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452553 +INFO:root:found 2 records +INFO:root:record: nmdc:5043d72cc886ce2e5d15f619ec124c9a, ReadBased Analysis Activity for nmdc:mga0hhgs46 +INFO:root:PassingDataObject: nmdc:ed9cea2fb44e2b1421a49da33a013c09 +INFO:root:PassingDataObject: nmdc:27088b178349125cee71efa0275b8a7d +INFO:root:PassingDataObject: nmdc:1b4090acd8e7b1db33db8ae128e392a1 +INFO:root:PassingDataObject: nmdc:bbcaea92f558288ba2495cc16598413a +INFO:root:PassingDataObject: nmdc:e64507b6932b63aa0b1e1ece9980da9c +INFO:root:PassingDataObject: nmdc:4bddc5d8743d41b065386d9cd567b1ff +INFO:root:PassingDataObject: nmdc:64bff3edcfc7e37f535049c515778ca2 +INFO:root:PassingDataObject: nmdc:d27a08c9e68aaea155f2c34310c24c43 +INFO:root:PassingDataObject: nmdc:3211fdbc0c7294e3bf987baa489ac4a2 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:e57a496e78e25188f86efc03e7fa59a9, ReadBased Analysis Activity for nmdc:mga09aej88 +INFO:root:PassingDataObject: nmdc:23842d82847a1b7bae2c5da7a5874f98 +INFO:root:PassingDataObject: nmdc:e5373915e0565c0f676d20fd3b30e458 +INFO:root:PassingDataObject: nmdc:ad63f96e6f4b925759fdc2dedd315288 +INFO:root:PassingDataObject: nmdc:5bff25ae2ce9d3eb8856a48f2b9253c0 +INFO:root:PassingDataObject: nmdc:6106e5dcbf1b8e8b8094779f6d35f3ab +INFO:root:PassingDataObject: nmdc:eeda9248dd506b8c6546e5a3fbfdc548 +INFO:root:PassingDataObject: nmdc:793725206f100f594282e414639ac781 +INFO:root:PassingDataObject: nmdc:58dff5051ec8c9dfc3e1ccf6d7a33e08 +INFO:root:PassingDataObject: nmdc:0d03fc4f6d489d2cbf6eeb6bf580e0fe +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452553 +INFO:root:found 2 records +INFO:root:record: nmdc:5043d72cc886ce2e5d15f619ec124c9a, Assembly Activity for nmdc:mga0hhgs46 +INFO:root:PassingDataObject: nmdc:4c95d33422e050fc25bb9f4edbd19926 +INFO:root:PassingDataObject: nmdc:b4d72520c0e29e034b146a78e2dd215b +INFO:root:PassingDataObject: nmdc:851277deca003f476092bb74e140d12e +INFO:root:PassingDataObject: nmdc:0326f5531557c3c4ae1b1c43d54f8ade +INFO:root:PassingDataObject: nmdc:117f42283c82414cdebe0d7be3f58e40 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:e57a496e78e25188f86efc03e7fa59a9, Assembly Activity for nmdc:mga09aej88 +INFO:root:PassingDataObject: nmdc:edac9f9b2f8338184bd01b6f7ad2cd10 +INFO:root:PassingDataObject: nmdc:0302bc4a30d5316675b4dce85e3e7eb8 +INFO:root:PassingDataObject: nmdc:6ab4d10ecaca63153f791ac0aeb47586 +INFO:root:PassingDataObject: nmdc:e693c62feae50b934285bf918620301f +INFO:root:PassingDataObject: nmdc:32349114cce34375f594df5822023873 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452553 +INFO:root:found 2 records +INFO:root:record: nmdc:e57a496e78e25188f86efc03e7fa59a9, Annotation Activity for nmdc:mga09aej88 +INFO:root:PassingDataObject: nmdc:8d2950502fd5b2cd0536ede1f0636d29 +INFO:root:PassingDataObject: nmdc:40e11600b711dcdf139cb2dbf6380e52 +INFO:root:PassingDataObject: nmdc:f78f261a2b7fc002c41e9499150fb505 +INFO:root:PassingDataObject: nmdc:522ceb674c90dc8d420900bf93b24b5f +INFO:root:PassingDataObject: nmdc:21166313d532a10bb78efb9d2cb45e07 +INFO:root:PassingDataObject: nmdc:264d93e1fd00eae42aa49c35b87455bc +INFO:root:PassingDataObject: nmdc:74665d31e0b0002b5c27699970394896 +INFO:root:PassingDataObject: nmdc:8aab31174f3c95a4e1308b70d87a527f +INFO:root:PassingDataObject: nmdc:22ff12aaf35ccd2de8693ce3e1555001 +INFO:root:PassingDataObject: nmdc:b47de086f7cd4c65c214c95c87f82e4c +INFO:root:PassingDataObject: nmdc:26a407cac3cf7e43829424154fc890e3 +INFO:root:PassingDataObject: nmdc:8dcd23066a2d1b62e529ef01ea859411 +INFO:root:PassingDataObject: nmdc:3d783950c5cff49c49f49b92a1e6cc06 +INFO:root:PassingDataObject: nmdc:900ed540972bf9d9e2d6bad81a315e1f +INFO:root:PassingDataObject: nmdc:4285f1650c407316930bb1072695c408 +INFO:root:PassingDataObject: nmdc:8b1c26269188f8870f36beccd85dc560 +INFO:root:PassingDataObject: nmdc:226190df89e97568428741eed225d413 +INFO:root:PassingDataObject: nmdc:f2fada4bf72cd82efc585045e45fbc2e +INFO:root:PassingDataObject: nmdc:89fe814c025b65e91c5a779fa782c68e +INFO:root:PassingDataObject: nmdc:eb95f2ced70c04e4a51c6da2fd4f705e +INFO:root:PassingDataObject: nmdc:236277f6436b58b5b712aa1b237df25b +INFO:root:PassingDataObject: nmdc:8c59f1c73a4fe7534fffa90b8869448d +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:5043d72cc886ce2e5d15f619ec124c9a, Annotation Activity for nmdc:mga0hhgs46 +INFO:root:PassingDataObject: nmdc:5a20c9c23c56b881a63bdb5725caebb8 +INFO:root:PassingDataObject: nmdc:581381145e6fed6d0b2287c41280ee3b +INFO:root:PassingDataObject: nmdc:a1b0e0b63483e17e580829b18a1de354 +INFO:root:PassingDataObject: nmdc:ac2ef1af0a742f1a868304700a5e8cd7 +INFO:root:PassingDataObject: nmdc:5cdd3611b6bcdb3bec86264eb86df6c3 +INFO:root:PassingDataObject: nmdc:8259cf7b3a3669d3127599b789fcc135 +INFO:root:PassingDataObject: nmdc:9fcb2a0b2fd9e416b29163d8e307af84 +INFO:root:PassingDataObject: nmdc:9a4546298e82feea75c5487d04e892cd +INFO:root:PassingDataObject: nmdc:fe6fb14ba29b836acc6d6f342d3d676c +INFO:root:PassingDataObject: nmdc:eca5e185adcc590c6e8b686b66c361ff +INFO:root:PassingDataObject: nmdc:192ea2de0e612dae9851acc995f2fbee +INFO:root:PassingDataObject: nmdc:ba54849401147403923e7f36efa28f31 +INFO:root:PassingDataObject: nmdc:f8d12f59217a94304ce6442fa3765fc5 +INFO:root:PassingDataObject: nmdc:35a55349290d57ddf5563ed54d8cd47c +INFO:root:PassingDataObject: nmdc:3560c9978b8aa4caaee5278dc19f67c4 +INFO:root:PassingDataObject: nmdc:604bb97327c40798a384ea8e34da23aa +INFO:root:PassingDataObject: nmdc:8424bd1b90db1bccdeb757ca5037d103 +INFO:root:PassingDataObject: nmdc:94af79ccdbe918cd0a603e33fd93db1d +INFO:root:PassingDataObject: nmdc:3b4247289e26c201e1040e8e5c26c3f2 +INFO:root:PassingDataObject: nmdc:14c37702c9a457cf4df9c53b36cb52e2 +INFO:root:PassingDataObject: nmdc:61b3074f3c6fb00f924b4fca48a5a686 +INFO:root:PassingDataObject: nmdc:2bc953eade3b826b253a0450a26c059b +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452553 +INFO:root:found 2 records +INFO:root:record: nmdc:e57a496e78e25188f86efc03e7fa59a9, MAGs Analysis Activity for nmdc:mga09aej88 +INFO:root:PassingDataObject: nmdc:3636d9be9d68b0f3de7f24f6492b502a +INFO:root:PassingDataObject: nmdc:3feaf4caedf44d21e51f367b7371e79d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:5043d72cc886ce2e5d15f619ec124c9a, MAGs Analysis Activity for nmdc:mga0hhgs46 +INFO:root:PassingDataObject: nmdc:7d50890af89def2618327efb73bf9286 +INFO:root:PassingDataObject: nmdc:32639e2adad8b9290aaee5d4c2fca8dc +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452553 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-zzzzv091 +INFO:root:legacy_id: gold:Gp0452662 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zzzzv091 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f220ed505e0f9982125df283ae33406b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ad3e38f4880e471c4877452adc0512e1 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452662 +INFO:root:found 2 records +INFO:root:record: nmdc:c246657aad02c3c78dca09ecee6f7e47, Read QC Activity for nmdc:mga028x879 +INFO:root:PassingDataObject: nmdc:8b1520ff3fb64a62d67f308dad4aabba +INFO:root:PassingDataObject: nmdc:a5af7649476cefd7ac355e94f2874d2b +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:ab98bd46f69852307d0ed36a6c73d0cf, Read QC Activity for nmdc:mga0sadz39 +INFO:root:PassingDataObject: nmdc:2df03598d581f20b4a2a852d9dcbcf6a +INFO:root:PassingDataObject: nmdc:d54875892d920b05f30171e90c265211 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452662 +INFO:root:found 2 records +INFO:root:record: nmdc:ab98bd46f69852307d0ed36a6c73d0cf, ReadBased Analysis Activity for nmdc:mga0sadz39 +INFO:root:PassingDataObject: nmdc:f327d1b9781ed9f697b6c0e90fc31c95 +INFO:root:PassingDataObject: nmdc:30cd69d221622ec094b294745b86eaf9 +INFO:root:PassingDataObject: nmdc:019767d99b12a80a24732e78005e11ea +INFO:root:PassingDataObject: nmdc:820fc937d569d91afaed6e1ccac1bd72 +INFO:root:PassingDataObject: nmdc:3991320eff418401ec4fb251dc669ca5 +INFO:root:PassingDataObject: nmdc:1ee22ae195890d30de6074eceed78546 +INFO:root:PassingDataObject: nmdc:e1a5c91ef8084c7f2b1c0b6eba33f4ec +INFO:root:PassingDataObject: nmdc:f77556b288d95857ccf7d804f466bacb +INFO:root:PassingDataObject: nmdc:60d2513a51927685f8054eb4c1372d9b +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:c246657aad02c3c78dca09ecee6f7e47, ReadBased Analysis Activity for nmdc:mga028x879 +INFO:root:PassingDataObject: nmdc:5a766cefe7aab89fd557af69bc4d509f +INFO:root:PassingDataObject: nmdc:e98779b6088b810a9185f8fabb796439 +INFO:root:PassingDataObject: nmdc:910458b277b9562364460e0171b4dd77 +INFO:root:PassingDataObject: nmdc:9dd589fa36e71ac58fb3086a1477846a +INFO:root:PassingDataObject: nmdc:18dc61a731e2ee75707ef08932659d55 +INFO:root:PassingDataObject: nmdc:91894e0d8714da31b1284cdb0e1dcfa1 +INFO:root:PassingDataObject: nmdc:f6adf357acd3830132b8bf4e21f602ec +INFO:root:PassingDataObject: nmdc:be741c34fe8702655a5ed93567766989 +INFO:root:PassingDataObject: nmdc:fb36d60da00c92fe6fa4f5bc680f94d0 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452662 +INFO:root:found 2 records +INFO:root:record: nmdc:c246657aad02c3c78dca09ecee6f7e47, Assembly Activity for nmdc:mga028x879 +INFO:root:PassingDataObject: nmdc:ee0e347a0da47d694f7aa36df8dfcd5b +INFO:root:PassingDataObject: nmdc:52d0242d5bc79831c78d1341d9af10ff +INFO:root:PassingDataObject: nmdc:7d1f0b5d4a0de1abf454e09e03f4fde1 +INFO:root:PassingDataObject: nmdc:4905bfada4458a5c526cc067b55e4b85 +INFO:root:PassingDataObject: nmdc:45159ee82d066251f8a8d9c40360e3f6 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:ab98bd46f69852307d0ed36a6c73d0cf, Assembly Activity for nmdc:mga0sadz39 +INFO:root:PassingDataObject: nmdc:b40b707c5e0e31db906afcfdc3cfc4ed +INFO:root:PassingDataObject: nmdc:e7d1c4a2bc3d5dad50b8b112fa7cdb86 +INFO:root:PassingDataObject: nmdc:6f581034a1ca9502571051655e7292f1 +INFO:root:PassingDataObject: nmdc:35e381f697ba094e00c4486b0b10cb4c +INFO:root:PassingDataObject: nmdc:b48a3c5e687f8e112b0e9bf39c9a3b62 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452662 +INFO:root:found 2 records +INFO:root:record: nmdc:ab98bd46f69852307d0ed36a6c73d0cf, Annotation Activity for nmdc:mga0sadz39 +INFO:root:PassingDataObject: nmdc:0a28ed0d49fd7ceb90af16ef0549978f +INFO:root:PassingDataObject: nmdc:102622ef4fbd7bda61c7846237f12fc9 +INFO:root:PassingDataObject: nmdc:4d953ee5a99bdbc58234c0d66a91f636 +INFO:root:PassingDataObject: nmdc:6ee267ea12c6ffaec138f3141a68b51d +INFO:root:PassingDataObject: nmdc:6171a33768a6eb0fc79e069bd96419c4 +INFO:root:PassingDataObject: nmdc:b2bdd9874ef5ea6358487497e94d69ec +INFO:root:PassingDataObject: nmdc:de7977066bcae61f58bec03f7baa3c03 +INFO:root:PassingDataObject: nmdc:e3275fe82482a385750eaeca41e117fd +INFO:root:PassingDataObject: nmdc:673c85a5f6560cbc443ea6d9d616ae54 +INFO:root:PassingDataObject: nmdc:1ab3885e371261432054331899212bdf +INFO:root:PassingDataObject: nmdc:8726623faa14dbbfe5c73a46a750c4e3 +INFO:root:PassingDataObject: nmdc:bf48acfc195543b314734eae0341f20a +INFO:root:PassingDataObject: nmdc:1e1190f210093a3c62eaffb70c7b22d4 +INFO:root:PassingDataObject: nmdc:a511efd012823efa7768357254246406 +INFO:root:PassingDataObject: nmdc:30bccc1976c261cb3530be35dbc15f2a +INFO:root:PassingDataObject: nmdc:672c36ec216a52d1338ada8714bbf555 +INFO:root:PassingDataObject: nmdc:18577c6301104bc5eb148c4d7a528bf8 +INFO:root:PassingDataObject: nmdc:250ea556a0fab4a224bb181a68fb9971 +INFO:root:PassingDataObject: nmdc:5f331c5aebb9e4711603e6b9f0989dbd +INFO:root:PassingDataObject: nmdc:d2d36bbc12da11e4da1e49b5aefc8cfb +INFO:root:PassingDataObject: nmdc:b421133eea2c7641cc9c0055c3dbafc8 +INFO:root:PassingDataObject: nmdc:786f0821318f3930d728daa95ab76681 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:c246657aad02c3c78dca09ecee6f7e47, Annotation Activity for nmdc:mga028x879 +INFO:root:PassingDataObject: nmdc:7e87ae338aa499cee26b4ff63db6f3b8 +INFO:root:PassingDataObject: nmdc:1f36d5b172c2262123d142dc92755726 +INFO:root:PassingDataObject: nmdc:107acf3aad243e82cf222fdf359486bd +INFO:root:PassingDataObject: nmdc:6ea34f659269df37ae25846edb46d311 +INFO:root:PassingDataObject: nmdc:86426d18d5b44fb9c604253e721482ce +INFO:root:PassingDataObject: nmdc:7291bb1b256daed63b2ba5d26888cee9 +INFO:root:PassingDataObject: nmdc:5f69bb2c55e55c386369277f28d871ec +INFO:root:PassingDataObject: nmdc:b691e154efeba7c5b97d24ec697d0618 +INFO:root:PassingDataObject: nmdc:d9bf2507ca8aff0cfd41fa8047a73c63 +INFO:root:PassingDataObject: nmdc:426372dd752e518997bd037f5f42ffd4 +INFO:root:PassingDataObject: nmdc:d195edbb04cfdc3bb3a5caca02e4031b +INFO:root:PassingDataObject: nmdc:d0c2bef0f533f6dace1fa14a25598391 +INFO:root:PassingDataObject: nmdc:de9c6f7db21102986d744714ad3c0c4b +INFO:root:PassingDataObject: nmdc:8ae3d6fb80ee33055c22a42942e570f6 +INFO:root:PassingDataObject: nmdc:807bb318037ca19da82ada4417e9fbf6 +INFO:root:PassingDataObject: nmdc:5df4d62d779f11abd2f2cae5f33e832a +INFO:root:PassingDataObject: nmdc:e58275678c9b5eede65e946a5e61aff6 +INFO:root:PassingDataObject: nmdc:a00fcc9db1bbf75d4ca57a210ab3ef7e +INFO:root:PassingDataObject: nmdc:978d6ce0b2284bebc5d6740364800754 +INFO:root:PassingDataObject: nmdc:701be69948de57a6aab441afcfc7dc3b +INFO:root:PassingDataObject: nmdc:6cbb2c0f33bbd7e3fb373df527a08166 +INFO:root:PassingDataObject: nmdc:a68b6a63093978692a04e3d1d207e376 +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452662 +INFO:root:found 2 records +INFO:root:record: nmdc:ab98bd46f69852307d0ed36a6c73d0cf, MAGs Analysis Activity for nmdc:mga0sadz39 +INFO:root:PassingDataObject: nmdc:e42cf059d1e0fbecd9f33324344f07a7 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:ab98bd46f69852307d0ed36a6c73d0cf +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ab98bd46f69852307d0ed36a6c73d0cf, MAGs Analysis Activity for nmdc:mga0sadz39 +INFO:root:record: nmdc:c246657aad02c3c78dca09ecee6f7e47, MAGs Analysis Activity for nmdc:mga028x879 +INFO:root:PassingDataObject: nmdc:8817c571d79c190a72a47b9586baf725 +INFO:root:PassingDataObject: nmdc:6017183acd4e7309b0d7ba72e26f3ab8 +INFO:root:passing_data_objects: 2 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452662 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-enfb5c62 +INFO:root:legacy_id: gold:Gp0452670 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-enfb5c62 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f9cd380614657f8bb1fa13674a77a4bc +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2bc8b8e0c2d076e24e6e920cc15d1576 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:1785fea851d20737d5992696760ee722 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452670 +INFO:root:found 3 records +INFO:root:record: nmdc:df9f601ef4e0eb13288c45886dae6df1, Read QC Activity for nmdc:mga0z3ct56 +INFO:root:PassingDataObject: nmdc:f853edbd2f9b7403fea6ad7e3ce2e45f +INFO:root:PassingDataObject: nmdc:7e4590864b9defe453e353193e5e6969 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:e8b699c98605cb29ea1f080f3273adb9, Read QC Activity for nmdc:mga0b9y137 +INFO:root:PassingDataObject: nmdc:e6109b028da661758ad4ff643ea61d22 +INFO:root:PassingDataObject: nmdc:3ef8788067308145dcb3e9a371b7f654 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:76857f30a44d14013adc071601a64e2a, Read QC Activity for nmdc:mga0pk8v75 +INFO:root:PassingDataObject: nmdc:ba7940b808fac4ae3ac6624d1bb6907e +INFO:root:PassingDataObject: nmdc:f7c916992bd8c38693a48be911bcf666 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452670 +INFO:root:found 3 records +INFO:root:record: nmdc:df9f601ef4e0eb13288c45886dae6df1, ReadBased Analysis Activity for nmdc:mga0z3ct56 +INFO:root:PassingDataObject: nmdc:422cb59eda56f749bd8ab4b992c9a5f7 +INFO:root:PassingDataObject: nmdc:5b3d42b1383dad1b8647cd28d033b662 +INFO:root:PassingDataObject: nmdc:96208d37cb24d15fa3aeab11c24b75ad +INFO:root:PassingDataObject: nmdc:cbb68c9c45d7d7814ac0310d9978322b +INFO:root:PassingDataObject: nmdc:604faff3cc8061977ef19fce4c69f4cc +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:df9f601ef4e0eb13288c45886dae6df1 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:df9f601ef4e0eb13288c45886dae6df1 +ERROR:root:FailedDataObject: nmdc:2576604175827e63bce61e048e528c7d, +ERROR:root:FailedDataObject: nmdc:0a4602789563a18fb2dce300a3ad8754, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:df9f601ef4e0eb13288c45886dae6df1, ReadBased Analysis Activity for nmdc:mga0z3ct56 +INFO:root:record: nmdc:e8b699c98605cb29ea1f080f3273adb9, ReadBased Analysis Activity for nmdc:mga0b9y137 +INFO:root:PassingDataObject: nmdc:439bcda1b6eef25d8dd4b586e11ff49d +INFO:root:PassingDataObject: nmdc:cb628ba2bb82092dac89f7e06d91f5ba +INFO:root:PassingDataObject: nmdc:64ba40f56178aade7818a15d463704a6 +INFO:root:PassingDataObject: nmdc:5f93bba2f1010589bada68b4d134b607 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:e8b699c98605cb29ea1f080f3273adb9 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:e8b699c98605cb29ea1f080f3273adb9 +ERROR:root:FailedDataObject: nmdc:5df4369f2fcbea90f99165ee82ab3ef7, +ERROR:root:FailedDataObject: nmdc:c779580a68e820bc802a2573f5413d51, +ERROR:root:FailedDataObject: nmdc:c198e7082a517449961f1d03a57833a3, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e8b699c98605cb29ea1f080f3273adb9, ReadBased Analysis Activity for nmdc:mga0b9y137 +INFO:root:record: nmdc:76857f30a44d14013adc071601a64e2a, ReadBased Analysis Activity for nmdc:mga0pk8v75 +INFO:root:PassingDataObject: nmdc:b4a55353c30be31db192ebac7b5fb943 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:76857f30a44d14013adc071601a64e2a +ERROR:root:FailedDataObject: nmdc:34944adf7fa99363c087d925cf9bdeab, +ERROR:root:FailedDataObject: nmdc:1202a0efe1e562af073959d2be8755c4, +ERROR:root:FailedDataObject: nmdc:e556f57f046cb4de7a0dac09d8702c69, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:76857f30a44d14013adc071601a64e2a +ERROR:root:FailedDataObject: nmdc:315159ac9ffacccbb60dee3e341b9767, +ERROR:root:FailedDataObject: nmdc:d7bccff4f083f9e9b78b5b85ddb56151, +ERROR:root:FailedDataObject: nmdc:70a886e80f5c7dd21115a10baff26265, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:76857f30a44d14013adc071601a64e2a, ReadBased Analysis Activity for nmdc:mga0pk8v75 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452670 +INFO:root:found 3 records +INFO:root:record: nmdc:df9f601ef4e0eb13288c45886dae6df1, Assembly Activity for nmdc:mga0z3ct56 +INFO:root:PassingDataObject: nmdc:2695cc2056ec1f9c230f39528764b1d2 +INFO:root:PassingDataObject: nmdc:0432d5c83346cc038651fe5abc2ec06f +INFO:root:PassingDataObject: nmdc:2a9fd2278ed3f6eddb9d5820ce92861b +INFO:root:PassingDataObject: nmdc:ef1d1f408b6a0f9a3fe616be9c1e67d7 +INFO:root:PassingDataObject: nmdc:4132e3d10bbb88a575a698109fce6229 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:e8b699c98605cb29ea1f080f3273adb9, Assembly Activity for nmdc:mga0b9y137 +INFO:root:PassingDataObject: nmdc:6f3430081c2d7904cf4a0e336e7db807 +INFO:root:PassingDataObject: nmdc:dcc1d8daee7cc382bba4b9910731cbd5 +INFO:root:PassingDataObject: nmdc:e5c3b462f3508005a92473fc4e1513f9 +INFO:root:PassingDataObject: nmdc:16278e2f4a87471b1da44fce4a58ed98 +INFO:root:PassingDataObject: nmdc:c6bfd91d7590b6b6f7a577d62f248b66 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:76857f30a44d14013adc071601a64e2a, Assembly Activity for nmdc:mga0pk8v75 +INFO:root:PassingDataObject: nmdc:15bbcd6917fe391cd4fa7c76a43122e6 +INFO:root:PassingDataObject: nmdc:ed770da0e5c12f7f5a3e8dcdd71bcead +INFO:root:PassingDataObject: nmdc:a047ecb2982650ba51de5ec1a4c6e7cd +INFO:root:PassingDataObject: nmdc:26e4156833b84456974226dac1e5e601 +INFO:root:PassingDataObject: nmdc:9e7f3b14de13d65e539894f728e34a8e +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452670 +INFO:root:found 3 records +INFO:root:record: nmdc:df9f601ef4e0eb13288c45886dae6df1, Annotation Activity for nmdc:mga0z3ct56 +INFO:root:PassingDataObject: nmdc:1c652677873f1c588edd62115d6a1684 +INFO:root:PassingDataObject: nmdc:f1adbf753bd2724de0d4f171de07b6ab +INFO:root:PassingDataObject: nmdc:d1e97a396a3e15d2bc98bac4e7cd339f +INFO:root:PassingDataObject: nmdc:67d7a52b1b73e9db887f99dd5e2d7673 +INFO:root:PassingDataObject: nmdc:26d6b6620c304547beca2d47f2ffd20c +INFO:root:PassingDataObject: nmdc:8bfef91fe2b6abc225aad32a9bd34cd7 +INFO:root:PassingDataObject: nmdc:bcb0e3c06442c2eb3349d3bcdaac9042 +INFO:root:PassingDataObject: nmdc:b29b195e38d237d393ffb58c87adafd7 +INFO:root:PassingDataObject: nmdc:7606f53487a48cceebddabd6aa60dc8b +INFO:root:PassingDataObject: nmdc:3838211f31aedfaf21a745245ee4586b +INFO:root:PassingDataObject: nmdc:f36ab1cdfb288dc1650cb5420f96a132 +INFO:root:PassingDataObject: nmdc:af113803330673961ccd27089ddbdbb6 +INFO:root:PassingDataObject: nmdc:a47d2b912a4cbaf214d8466b540f1d75 +INFO:root:PassingDataObject: nmdc:15453ce0bedfd62915e9af83a9f9a1fd +INFO:root:PassingDataObject: nmdc:e7417e471a54c43d9a64fdf5b6035d39 +INFO:root:PassingDataObject: nmdc:667b2e4206447c2b51a23cebffe0b3cf +INFO:root:PassingDataObject: nmdc:202998022d651165bd87b5da773ebf36 +INFO:root:PassingDataObject: nmdc:ac7cb99607dc6c26c09e5f40a740a4cd +INFO:root:PassingDataObject: nmdc:adc54a98f5579071e81362a98c39b096 +INFO:root:PassingDataObject: nmdc:3ff561c25d166b7756256653643106e5 +INFO:root:PassingDataObject: nmdc:ddffedbbd45e2d9047cd9eb885c35f95 +INFO:root:PassingDataObject: nmdc:6ef3ef3d3a40a8b228bb881a9f399ac1 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:e8b699c98605cb29ea1f080f3273adb9, Annotation Activity for nmdc:mga0b9y137 +INFO:root:PassingDataObject: nmdc:5649fbcea922d80174a1c09c833f5ee8 +INFO:root:PassingDataObject: nmdc:777cb4031522078e0cfa4bb59347e20f +INFO:root:PassingDataObject: nmdc:5be79e6f6caa58f7425c95b151ff794a +INFO:root:PassingDataObject: nmdc:7fca59276de66798db5fc63a0ae8a620 +INFO:root:PassingDataObject: nmdc:3379ffb1adac16d2ac100aa10ec24ab5 +INFO:root:PassingDataObject: nmdc:aa1f4faad4185275202e77d5440b9ae4 +INFO:root:PassingDataObject: nmdc:870e0e81b4ef30bcc35d349ec164e321 +INFO:root:PassingDataObject: nmdc:106f901e7e547deb4167f32af7e75ef3 +INFO:root:PassingDataObject: nmdc:d32b81542166d355372891d0cd2ba691 +INFO:root:PassingDataObject: nmdc:08fa2d705362e070baf91a2efaa9ae77 +INFO:root:PassingDataObject: nmdc:1ea510ceb88fc3c25802c34524a8c796 +INFO:root:PassingDataObject: nmdc:6338f6437b4ac43453d7bba19f34a596 +INFO:root:PassingDataObject: nmdc:8509597dbca4874aad667f824b40fcff +INFO:root:PassingDataObject: nmdc:4e772be66b95414503129735c57ed1f4 +INFO:root:PassingDataObject: nmdc:226556f4a88b643c97b56b6c2cde9442 +INFO:root:PassingDataObject: nmdc:2e1d4d6f19f7cc1d3bcde0c4ee56cbb2 +INFO:root:PassingDataObject: nmdc:c4f2081be339a461ca24931e2d434e8f +INFO:root:PassingDataObject: nmdc:aef04d142f72425c69ec8d59c0a0ba4f +INFO:root:PassingDataObject: nmdc:add30718668a6501d4dfc3805f5c747f +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:e8b699c98605cb29ea1f080f3273adb9 +ERROR:root:FailedDataObject: nmdc:b345aee5949609dff800d8a163979eda, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e8b699c98605cb29ea1f080f3273adb9, Annotation Activity for nmdc:mga0b9y137 +INFO:root:record: nmdc:76857f30a44d14013adc071601a64e2a, Annotation Activity for nmdc:mga0pk8v75 +INFO:root:PassingDataObject: nmdc:0228302694e853cc1e0c7f37f7e42463 +INFO:root:PassingDataObject: nmdc:8f8cb96e92b254187a40196e74df8fe3 +INFO:root:PassingDataObject: nmdc:3f9f4d240969c6516202aa18791c9ee8 +INFO:root:PassingDataObject: nmdc:99d1a07f03a9d60787b964bb7d5bc62f +INFO:root:PassingDataObject: nmdc:8757ed88ddb58490960a58be09ca4f3d +INFO:root:PassingDataObject: nmdc:7ceda31af0e1cc9a2cccd07ab1c5bacd +INFO:root:PassingDataObject: nmdc:4bcfb075569f9158343bb05949b09395 +INFO:root:PassingDataObject: nmdc:2a70f8738dff0136b194a12745a79cf2 +INFO:root:PassingDataObject: nmdc:2892c24f9e0ecf859950e67a647fb063 +INFO:root:PassingDataObject: nmdc:bcc01804fb8e5affa458e842a386262e +INFO:root:PassingDataObject: nmdc:7418cec5e3e18e0ddcbe6f7bb006e731 +INFO:root:PassingDataObject: nmdc:28ab7dd8cc70cd68d678a1c4c0ba1bc5 +INFO:root:PassingDataObject: nmdc:b0425651ff8d4e932227dcea0f9c3479 +INFO:root:PassingDataObject: nmdc:6f77f04ec6ebe081e18de143e9ffd189 +INFO:root:PassingDataObject: nmdc:b63a02ee78858f6a3af822543c27112b +INFO:root:PassingDataObject: nmdc:8c1b45b887f6c5a0c96470764d47996c +INFO:root:PassingDataObject: nmdc:e89182ee834d8b6d893315e06c376bf1 +INFO:root:PassingDataObject: nmdc:a5adf7cd3d15d702c9c393622d121101 +INFO:root:PassingDataObject: nmdc:7e0f4727369d3f01033776b0c0984174 +INFO:root:PassingDataObject: nmdc:d10d21933bd5e5115081a82e4499cbc4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:76857f30a44d14013adc071601a64e2a +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:76857f30a44d14013adc071601a64e2a, Annotation Activity for nmdc:mga0pk8v75 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452670 +INFO:root:found 3 records +INFO:root:record: nmdc:df9f601ef4e0eb13288c45886dae6df1, MAGs Analysis Activity for nmdc:mga0z3ct56 +INFO:root:PassingDataObject: nmdc:11854deaa663d6928650325b1d4a28d8 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:df9f601ef4e0eb13288c45886dae6df1 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:df9f601ef4e0eb13288c45886dae6df1, MAGs Analysis Activity for nmdc:mga0z3ct56 +INFO:root:record: nmdc:e8b699c98605cb29ea1f080f3273adb9, MAGs Analysis Activity for nmdc:mga0b9y137 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e8b699c98605cb29ea1f080f3273adb9 +ERROR:root:FailedDataObject: nmdc:81faae965f170f5d166a2d9b2a45a094, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e8b699c98605cb29ea1f080f3273adb9, MAGs Analysis Activity for nmdc:mga0b9y137 +INFO:root:record: nmdc:76857f30a44d14013adc071601a64e2a, MAGs Analysis Activity for nmdc:mga0pk8v75 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:76857f30a44d14013adc071601a64e2a +ERROR:root:FailedDataObject: nmdc:9737498258e6f2aa3be7c6d389533dbd, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:76857f30a44d14013adc071601a64e2a, MAGs Analysis Activity for nmdc:mga0pk8v75 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452670 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-d5yqmn71 +INFO:root:legacy_id: gold:Gp0618755 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-d5yqmn71 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f10df783428342de1089957c69c832f5 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:e1585b2c934530fcbab389acfda231ce +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d86ab1efc2ff9f9630025c2a591b808d +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0618755 +INFO:root:found 3 records +INFO:root:record: nmdc:f2ead36238e5cc6006966bb748240677, Read QC Activity for nmdc:mga0421670 +INFO:root:PassingDataObject: nmdc:3374a2f79ac78cdddd60054f8d486298 +INFO:root:PassingDataObject: nmdc:9c5488f989a7ff65289f03a8d99ee0b3 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:506e17a7e4693074ce99ae8cba535939, Read QC Activity for nmdc:mga0v42231 +INFO:root:PassingDataObject: nmdc:b14f20909b0736f8db5769c65f6ca43d +INFO:root:PassingDataObject: nmdc:fcbb54138a210e448005db783903ef51 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:1c6076bb35ad8ada919b62cb45cbfa04, Read QC Activity for nmdc:mga0khyn83 +INFO:root:PassingDataObject: nmdc:442de396424a2d87ca4b0562de9e3dd0 +INFO:root:PassingDataObject: nmdc:d7f97df03f60ab2382d38581bb9ce751 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0618755 +INFO:root:found 3 records +INFO:root:record: nmdc:f2ead36238e5cc6006966bb748240677, ReadBased Analysis Activity for nmdc:mga0421670 +INFO:root:PassingDataObject: nmdc:a21bf2495b9c930fb4b06f9e45bbe0f6 +INFO:root:PassingDataObject: nmdc:db969a64c7a78b5a1fc1ca291ea085ad +INFO:root:PassingDataObject: nmdc:9f7efae9890766182d46144ec4ad2894 +INFO:root:PassingDataObject: nmdc:ffb1d0e98a5918f7e1a71ee1070598ce +INFO:root:PassingDataObject: nmdc:b0cd0db2aa9db76e8fe044672e79214b +INFO:root:PassingDataObject: nmdc:d09db1df23913a3683c26d7a0dd48420 +INFO:root:PassingDataObject: nmdc:7945c95f3318ce2a83edccb103cb5c03 +INFO:root:PassingDataObject: nmdc:03d63dfb5e121ef3a0e059fad8c2bb7e +INFO:root:PassingDataObject: nmdc:8a9caa27e46d3c3ed9c0e8eb1903d8cb +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:1c6076bb35ad8ada919b62cb45cbfa04, ReadBased Analysis Activity for nmdc:mga0khyn83 +INFO:root:PassingDataObject: nmdc:acb01d83e0ba7306d0b7df6686d4295c +INFO:root:PassingDataObject: nmdc:978f917ac376777d589688975b9d0c88 +INFO:root:PassingDataObject: nmdc:c474b0fea33f0ee8e47fffd93dd1757b +INFO:root:PassingDataObject: nmdc:e47672bb1f51d2490da4a5cf440f099c +INFO:root:PassingDataObject: nmdc:611665fab92327d5f5eba3a10a77b806 +INFO:root:PassingDataObject: nmdc:b76cac1d4e17e3ae336bfbaf32555aa5 +INFO:root:PassingDataObject: nmdc:cd73b5c27e21a1029d3aa4dffaa00963 +INFO:root:PassingDataObject: nmdc:c50d1bebe368e78219573a7235345570 +INFO:root:PassingDataObject: nmdc:c85f4406ffa6b10b07ba5e02820143f3 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:506e17a7e4693074ce99ae8cba535939, ReadBased Analysis Activity for nmdc:mga0v42231 +INFO:root:PassingDataObject: nmdc:59289c90b2ac4db03aa67850f156da6e +INFO:root:PassingDataObject: nmdc:5ed6126ed7688e14de61ad01480b279c +INFO:root:PassingDataObject: nmdc:9819d37673fc43515e3f6be1a2f35152 +INFO:root:PassingDataObject: nmdc:53f000d9d48940151ad8050c88bb6663 +INFO:root:PassingDataObject: nmdc:f6753892e854a9a0368774f95641567a +INFO:root:PassingDataObject: nmdc:799eff3fff7dd52ef1e5a4db16279cf7 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:506e17a7e4693074ce99ae8cba535939 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:506e17a7e4693074ce99ae8cba535939 +ERROR:root:FailedDataObject: nmdc:639db5c9a10f3c448de806102d56f634, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:506e17a7e4693074ce99ae8cba535939, ReadBased Analysis Activity for nmdc:mga0v42231 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0618755 +INFO:root:found 3 records +INFO:root:record: nmdc:f2ead36238e5cc6006966bb748240677, Assembly Activity for nmdc:mga0421670 +INFO:root:PassingDataObject: nmdc:006505f17108be694646e1bc849db092 +INFO:root:PassingDataObject: nmdc:13e72df6e8e86861dbd52ff7d3005556 +INFO:root:PassingDataObject: nmdc:1c15599ad682105e1bb3919d50b8525e +INFO:root:PassingDataObject: nmdc:3d16b2b1ed1b2e0393a5e8c72b8b9230 +INFO:root:PassingDataObject: nmdc:c16b30ccff1988db6652948cf88f8286 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:506e17a7e4693074ce99ae8cba535939, Assembly Activity for nmdc:mga0v42231 +INFO:root:PassingDataObject: nmdc:7d3e4064768dbc62d6cb9fc3caf8e90e +INFO:root:PassingDataObject: nmdc:6547b83ac364df4afe6f9b54adcaa76f +INFO:root:PassingDataObject: nmdc:7ceee55dd472d1bb5d6bc83fd2841dd8 +INFO:root:PassingDataObject: nmdc:d12b1ef6ac33112c5c38bd3455248265 +INFO:root:PassingDataObject: nmdc:b85a39493d6a9b10bce048679653e414 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:1c6076bb35ad8ada919b62cb45cbfa04, Assembly Activity for nmdc:mga0khyn83 +INFO:root:PassingDataObject: nmdc:dde59d11b0df9ca733eb2b73eba81ff6 +INFO:root:PassingDataObject: nmdc:a4edad0f38a757345ee733e3a8884f91 +INFO:root:PassingDataObject: nmdc:0adc8c471ae49ecd84d420479cb4371a +INFO:root:PassingDataObject: nmdc:bf92ab1d0a14e361b43b2021068766da +INFO:root:PassingDataObject: nmdc:11df193f334fecb433af1e9044e26e3e +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0618755 +INFO:root:found 3 records +INFO:root:record: nmdc:f2ead36238e5cc6006966bb748240677, Annotation Activity for nmdc:mga0421670 +INFO:root:PassingDataObject: nmdc:63219d230eb658b7107c960c97bbf547 +INFO:root:PassingDataObject: nmdc:fd3842e396c2688aa33ed5a6b8b53822 +INFO:root:PassingDataObject: nmdc:4fca65458ea3aa9d0dde6271097714b7 +INFO:root:PassingDataObject: nmdc:3247d52547daac1c88f94dac123a542d +INFO:root:PassingDataObject: nmdc:3925738f9eaa5fe8c578a0f65b2c3132 +INFO:root:PassingDataObject: nmdc:02778b543ec27120d8c0e8a178a74c43 +INFO:root:PassingDataObject: nmdc:a950a918097a58ebc1581b74067ad9ad +INFO:root:PassingDataObject: nmdc:e5fb00bff15f6bef75e7915205ee5388 +INFO:root:PassingDataObject: nmdc:84bfe845366f5ec0bd19f94521c53430 +INFO:root:PassingDataObject: nmdc:887f919bd176084df591fb7ba0057de8 +INFO:root:PassingDataObject: nmdc:652a86e6d5b63ee33bdb5e7c4b60d2f4 +INFO:root:PassingDataObject: nmdc:ec961ebf2704f96c0617a29cfdbbae3c +INFO:root:PassingDataObject: nmdc:6e930925d5e2a8e6a6f6ed26b8ac53d9 +INFO:root:PassingDataObject: nmdc:ec1d45e0525397154cbb407efebf90b1 +INFO:root:PassingDataObject: nmdc:38cf57c52b5442a86f40f04b9f2a29a2 +INFO:root:PassingDataObject: nmdc:9e3816f0c345253ecef56044926c900d +INFO:root:PassingDataObject: nmdc:7af6b588357c03f2666180864ef96474 +INFO:root:PassingDataObject: nmdc:5af042ac57cd7b500cedba52a159cf60 +INFO:root:PassingDataObject: nmdc:69d9b9168ea854fc9da85e16c186dae9 +INFO:root:PassingDataObject: nmdc:0a52c7fa163423222287d1c00b05a183 +INFO:root:PassingDataObject: nmdc:b19020792af0ad52b4f01068b0f8438d +INFO:root:PassingDataObject: nmdc:5658d1d90c889c31af2cf8bb7dc10dac +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:506e17a7e4693074ce99ae8cba535939, Annotation Activity for nmdc:mga0v42231 +INFO:root:PassingDataObject: nmdc:230987e5ff40593cb475664c911dcb18 +INFO:root:PassingDataObject: nmdc:415040ac356c187952864530abd1f1fa +INFO:root:PassingDataObject: nmdc:87f0d39e4feee71a5ee0f8879e7e4905 +INFO:root:PassingDataObject: nmdc:b92a133747734c186a06ab44aa4e0ebf +INFO:root:PassingDataObject: nmdc:82f607ce14b73502fb354c67c2192b64 +INFO:root:PassingDataObject: nmdc:4c1509f3cb955430159cf4eaf76e92e7 +INFO:root:PassingDataObject: nmdc:eda4355f85f6681a3dd678f7c3940f00 +INFO:root:PassingDataObject: nmdc:e1a7c172910dcb19ebbcb5153393c0c5 +INFO:root:PassingDataObject: nmdc:5b11c3b3f528a4334ceb316b324b93ab +INFO:root:PassingDataObject: nmdc:cf168e04fdb94aba30e65ad0c084cf3f +INFO:root:PassingDataObject: nmdc:a02f251fd65e8ad85c0d0cedc78b1c77 +INFO:root:PassingDataObject: nmdc:6552a43e4f883fddc9c84db9f344a707 +INFO:root:PassingDataObject: nmdc:40a1f4303e0e5adb80e9f135ad0f6e65 +INFO:root:PassingDataObject: nmdc:47c5f1dad263e9bde5b421c3ea2a4853 +INFO:root:PassingDataObject: nmdc:7b6897d7c9e1a55136fe097c13aa5e81 +INFO:root:PassingDataObject: nmdc:a1eff9d3c4be3e51a98d1e715aa930c2 +INFO:root:PassingDataObject: nmdc:c52fe012cb727e88476db43d39b832be +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:506e17a7e4693074ce99ae8cba535939 +ERROR:root:FailedDataObject: nmdc:c85b4af88f214502616dc2884792132b, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:506e17a7e4693074ce99ae8cba535939, Annotation Activity for nmdc:mga0v42231 +INFO:root:record: nmdc:1c6076bb35ad8ada919b62cb45cbfa04, Annotation Activity for nmdc:mga0khyn83 +INFO:root:PassingDataObject: nmdc:0c9ef7f44945ed2befb7e3f565b3031c +INFO:root:PassingDataObject: nmdc:06c2409155e2d46cdc14113130c6da37 +INFO:root:PassingDataObject: nmdc:103c4eb46cd6a46cf641dbb73891bda2 +INFO:root:PassingDataObject: nmdc:35f216a66cf37d4aa1e515fcc8a27366 +INFO:root:PassingDataObject: nmdc:179bdffe9cc52a4cd2c92d3a19238fa2 +INFO:root:PassingDataObject: nmdc:1e5b45e689d9c2b2458dbd4eff935484 +INFO:root:PassingDataObject: nmdc:a3029406c054b15a564869a519b1dbbe +INFO:root:PassingDataObject: nmdc:c9e90dcc7b444cadbc94fffc8c80a28c +INFO:root:PassingDataObject: nmdc:1e10e3e3735df7f1c49ac4c23d972255 +INFO:root:PassingDataObject: nmdc:3660159fe396367a27744fa232b219f1 +INFO:root:PassingDataObject: nmdc:8f2fe6db609af19a9144c160c0bd7159 +INFO:root:PassingDataObject: nmdc:ccbda8d95209005fac91c2339eb7b7db +INFO:root:PassingDataObject: nmdc:beafe33240c0a95d5863347f8000c348 +INFO:root:PassingDataObject: nmdc:9648fbd0843f63e6d782b5f8d544b9b6 +INFO:root:PassingDataObject: nmdc:4f0190022967b63fb4497deda4120788 +INFO:root:PassingDataObject: nmdc:db9df7640c6f9508837fc73b3787b64f +INFO:root:PassingDataObject: nmdc:a13227894d9d757711ac25f6ebb3108e +INFO:root:PassingDataObject: nmdc:d74d3e193cc399454c562ecd7be70971 +INFO:root:PassingDataObject: nmdc:c54c4610c74490ad9a47670f43e86e76 +INFO:root:PassingDataObject: nmdc:29acf57e6fbcc94c1fff06906cd1117c +INFO:root:PassingDataObject: nmdc:a6d1644044f92660eb7793632ec01a24 +INFO:root:PassingDataObject: nmdc:736a122b8c1c949877dc1ebd08bddb9c +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0618755 +INFO:root:found 3 records +INFO:root:record: nmdc:f2ead36238e5cc6006966bb748240677, MAGs Analysis Activity for nmdc:mga0421670 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:f2ead36238e5cc6006966bb748240677 +ERROR:root:FailedDataObject: nmdc:aa0a581756ed9d2b8ab959280e1753b5, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f2ead36238e5cc6006966bb748240677, MAGs Analysis Activity for nmdc:mga0421670 +INFO:root:record: nmdc:506e17a7e4693074ce99ae8cba535939, MAGs Analysis Activity for nmdc:mga0v42231 +INFO:root:PassingDataObject: nmdc:46c8367d8c878f3a61a3c9b9a7581f84 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:506e17a7e4693074ce99ae8cba535939 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:506e17a7e4693074ce99ae8cba535939, MAGs Analysis Activity for nmdc:mga0v42231 +INFO:root:record: nmdc:1c6076bb35ad8ada919b62cb45cbfa04, MAGs Analysis Activity for nmdc:mga0khyn83 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1c6076bb35ad8ada919b62cb45cbfa04 +ERROR:root:FailedDataObject: nmdc:7acd3b1cb01c7484cf9434c9e6790869, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1c6076bb35ad8ada919b62cb45cbfa04, MAGs Analysis Activity for nmdc:mga0khyn83 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0618755 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-pt664b55 +INFO:root:legacy_id: gold:Gp0452548 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-pt664b55 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2fdc546f98ca51e07f85f0c51d948b2e +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b2542db62b08df2adb9cf830b42eeba4 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452548 +INFO:root:found 2 records +INFO:root:record: nmdc:67613d0f8a029dad4cdfd05bba20a020, Read QC Activity for nmdc:mga0x1rx81 +INFO:root:PassingDataObject: nmdc:899e9218e27ea3cccf3bb9d83ff3b157 +INFO:root:PassingDataObject: nmdc:35610a4ad1723a8b6c1d983ee5995d5d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:97bbd249994f810a5375029e811c0da1, Read QC Activity for nmdc:mga0f73941 +INFO:root:PassingDataObject: nmdc:fef57c12726b3173a402d0e2f702a2ba +INFO:root:PassingDataObject: nmdc:ae2edd75bddcaa72458a9e5001170a74 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452548 +INFO:root:found 2 records +INFO:root:record: nmdc:67613d0f8a029dad4cdfd05bba20a020, ReadBased Analysis Activity for nmdc:mga0x1rx81 +INFO:root:PassingDataObject: nmdc:0a637cd1f5106641dab031d3ba0d26e7 +INFO:root:PassingDataObject: nmdc:1ea049dc680a44f4e42af90d0944d147 +INFO:root:PassingDataObject: nmdc:e16a582fe9fd92a782f9c95bc39d9529 +INFO:root:PassingDataObject: nmdc:27143fe8ad1653c925c811c8b8129034 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:67613d0f8a029dad4cdfd05bba20a020 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:67613d0f8a029dad4cdfd05bba20a020 +ERROR:root:FailedDataObject: nmdc:35687e8aeb5dd4ed9714db08fabf0160, +ERROR:root:FailedDataObject: nmdc:19515ccfd71c8d456774f4e36cf033ee, +ERROR:root:FailedDataObject: nmdc:0a682c3a6e14552593c123775a53a2ed, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:67613d0f8a029dad4cdfd05bba20a020, ReadBased Analysis Activity for nmdc:mga0x1rx81 +INFO:root:record: nmdc:97bbd249994f810a5375029e811c0da1, ReadBased Analysis Activity for nmdc:mga0f73941 +INFO:root:PassingDataObject: nmdc:72167511d8245a4a174369f6dce16dc3 +INFO:root:PassingDataObject: nmdc:c3b8adbd69ac84afcc8bf58c22b2d890 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:97bbd249994f810a5375029e811c0da1 +ERROR:root:FailedDataObject: nmdc:51ddb5621e4a56137ec4ef3a0e8600c6, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:97bbd249994f810a5375029e811c0da1 +ERROR:root:FailedDataObject: nmdc:f944f1f3254fc8e63bf18e1f47537fd9, +ERROR:root:FailedDataObject: nmdc:6f391213a9ae98c11ff76acf59d45571, +ERROR:root:FailedDataObject: nmdc:ed15347856f5abf022776eecbfd51752, +ERROR:root:FailedDataObject: nmdc:975e182731ff0051684e2aadf7c24257, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:97bbd249994f810a5375029e811c0da1, ReadBased Analysis Activity for nmdc:mga0f73941 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452548 +INFO:root:found 2 records +INFO:root:record: nmdc:67613d0f8a029dad4cdfd05bba20a020, Assembly Activity for nmdc:mga0x1rx81 +INFO:root:PassingDataObject: nmdc:455ede6787249315c9e1c40bde963ee9 +INFO:root:PassingDataObject: nmdc:b11c681f4550f7bc55290e7b251fbbd8 +INFO:root:PassingDataObject: nmdc:1ca7f223dcda191ba87c034868716cf3 +INFO:root:PassingDataObject: nmdc:f5995fd932eeb18a7c11b8e1dba9371c +INFO:root:PassingDataObject: nmdc:36bfce3192f759b43ca5377b73233906 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:97bbd249994f810a5375029e811c0da1, Assembly Activity for nmdc:mga0f73941 +INFO:root:PassingDataObject: nmdc:4bd6263131b2068436d24dae203ade6e +INFO:root:PassingDataObject: nmdc:6c7e112a26dff8ebedf7d1497aa623b0 +INFO:root:PassingDataObject: nmdc:0bb2acfddcd54752d7263c5bb88b3aff +INFO:root:PassingDataObject: nmdc:d4900301f38d838db68bfd555090c755 +INFO:root:PassingDataObject: nmdc:247d1950359f49a474d9fbc4337f06b1 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452548 +INFO:root:found 2 records +INFO:root:record: nmdc:67613d0f8a029dad4cdfd05bba20a020, Annotation Activity for nmdc:mga0x1rx81 +INFO:root:PassingDataObject: nmdc:dfbc30e32c6237b49bda3004fdb17e16 +INFO:root:PassingDataObject: nmdc:2fcb509b2c3c511af77ab2012e3a6285 +INFO:root:PassingDataObject: nmdc:9dca21f3a620397f5f0648a5f501e7fc +INFO:root:PassingDataObject: nmdc:3395ce03b65913bdac93bd37e8605fe1 +INFO:root:PassingDataObject: nmdc:dc9c1d1ea7940b76ab821eb013b5bddb +INFO:root:PassingDataObject: nmdc:909558d21ef55cf294f078b735945e82 +INFO:root:PassingDataObject: nmdc:b3f34c6415c216a572274fee17aab826 +INFO:root:PassingDataObject: nmdc:eed01ed52867a2a03d91e654f220a32a +INFO:root:PassingDataObject: nmdc:df4bd398ef29a47c9f214d54dfcc34fe +INFO:root:PassingDataObject: nmdc:6bfb200b1f56382b7121bec5370d681b +INFO:root:PassingDataObject: nmdc:08e62be7f6fceae4def2bb3d1361b605 +INFO:root:PassingDataObject: nmdc:6c2abd1a45a7cbeececc05e5f38f2e47 +INFO:root:PassingDataObject: nmdc:62365c407ef88f952b3324a8a4fca9e8 +INFO:root:PassingDataObject: nmdc:e76c44c7eb07f7fee7a081b17036c71d +INFO:root:PassingDataObject: nmdc:1c55c1e10d287dad405d8573272c1696 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:67613d0f8a029dad4cdfd05bba20a020 +ERROR:root:FailedDataObject: nmdc:2b87de250a972e5ce865443f6845613e, +ERROR:root:FailedDataObject: nmdc:c832c48cb8c4944a5000821a53afbd5c, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:67613d0f8a029dad4cdfd05bba20a020, Annotation Activity for nmdc:mga0x1rx81 +INFO:root:record: nmdc:97bbd249994f810a5375029e811c0da1, Annotation Activity for nmdc:mga0f73941 +INFO:root:PassingDataObject: nmdc:39fc16df9abca2d1aa0360c11c2b897c +INFO:root:PassingDataObject: nmdc:9c573508c155f9db167b5255f97f3651 +INFO:root:PassingDataObject: nmdc:e02be09bbb3821a34665b6effce29918 +INFO:root:PassingDataObject: nmdc:97868b800dd167e5cb6b8d24838c96c8 +INFO:root:PassingDataObject: nmdc:6f7f216353e6f1d2e4e203fa0b0e997e +INFO:root:PassingDataObject: nmdc:995dfd56c7b14e295e70a47372a8dfc0 +INFO:root:PassingDataObject: nmdc:e490330acd9763cb417aca9b5e2c246a +INFO:root:PassingDataObject: nmdc:13265b61495a9f62a6dc8cbfd8e22495 +INFO:root:PassingDataObject: nmdc:9c98d9325b4571c3aee2476444e2e9fe +INFO:root:PassingDataObject: nmdc:de4c97455f9592a633ab71ead545c0f1 +INFO:root:PassingDataObject: nmdc:e188c9db3a7c2d6c69f80bea7e8db4a5 +INFO:root:PassingDataObject: nmdc:38d457cbc0ef7417caedb0032a97a774 +INFO:root:PassingDataObject: nmdc:af6e22662a7ac1d2484095a1e8d0a3a3 +INFO:root:PassingDataObject: nmdc:691845152be69f06190d9fe73c5f9c5b +INFO:root:PassingDataObject: nmdc:d5d705a935ac8990601ffc3fe7320849 +INFO:root:PassingDataObject: nmdc:87b592d21e87078d127c0e30b8079d92 +INFO:root:PassingDataObject: nmdc:97a51ea2adf61183e22357af3e1b80cf +INFO:root:PassingDataObject: nmdc:7f27e6faf642df108d4499c49c9e4c0e +INFO:root:PassingDataObject: nmdc:932326e1741dac64395c8a464367979c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:97bbd249994f810a5375029e811c0da1 +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:97bbd249994f810a5375029e811c0da1, Annotation Activity for nmdc:mga0f73941 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452548 +INFO:root:found 2 records +INFO:root:record: nmdc:67613d0f8a029dad4cdfd05bba20a020, MAGs Analysis Activity for nmdc:mga0x1rx81 +INFO:root:PassingDataObject: nmdc:82d3cdc6758d36cfb78833c349cacfa3 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:67613d0f8a029dad4cdfd05bba20a020 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:67613d0f8a029dad4cdfd05bba20a020, MAGs Analysis Activity for nmdc:mga0x1rx81 +INFO:root:record: nmdc:97bbd249994f810a5375029e811c0da1, MAGs Analysis Activity for nmdc:mga0f73941 +INFO:root:PassingDataObject: nmdc:a9a745567fb554b1969ba1f48d5832f2 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:97bbd249994f810a5375029e811c0da1 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:97bbd249994f810a5375029e811c0da1, MAGs Analysis Activity for nmdc:mga0f73941 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452548 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-g882jv95 +INFO:root:legacy_id: gold:Gp0452562 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-g882jv95 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:1d6fdd2c49a7d02f6da5f481e0b281c2 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b77923c9f8b2faf85f242870cac595e7 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452562 +INFO:root:found 2 records +INFO:root:record: nmdc:45063108b831737e2910ee772abfb7e3, Read QC Activity for nmdc:mga0fr0v43 +INFO:root:PassingDataObject: nmdc:b0ab788ee592978ea50f4a6d2370dc34 +INFO:root:PassingDataObject: nmdc:455213aa1caafe3a01ea2343a94e9395 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:c741e7ece6da4d44c85ccf65f83074e8, Read QC Activity for nmdc:mga0n2eb16 +INFO:root:PassingDataObject: nmdc:55b33284c7219b5ffb1221dd6be8cd99 +INFO:root:PassingDataObject: nmdc:c81d222a4cd7c0ddfb6e1ac0180a5b8a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452562 +INFO:root:found 2 records +INFO:root:record: nmdc:45063108b831737e2910ee772abfb7e3, ReadBased Analysis Activity for nmdc:mga0fr0v43 +INFO:root:PassingDataObject: nmdc:8e5ee4e13b524a2662c50a393a07f56c +INFO:root:PassingDataObject: nmdc:260c5796147709dae5bc0fa9c01231a4 +INFO:root:PassingDataObject: nmdc:c9bd7fc8e5c276f9c7fed8914c2e69e5 +INFO:root:PassingDataObject: nmdc:f66fffab0ae2540ae0a066ca0ead3de4 +INFO:root:PassingDataObject: nmdc:962dca0e839e8fa6cb0239544d0d7e79 +INFO:root:PassingDataObject: nmdc:1459fa2bf23226a200d296ff07897acc +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:45063108b831737e2910ee772abfb7e3 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:45063108b831737e2910ee772abfb7e3 +ERROR:root:FailedDataObject: nmdc:50afa99aae8ec5c8af51953645d0aadf, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:45063108b831737e2910ee772abfb7e3, ReadBased Analysis Activity for nmdc:mga0fr0v43 +INFO:root:record: nmdc:c741e7ece6da4d44c85ccf65f83074e8, ReadBased Analysis Activity for nmdc:mga0n2eb16 +INFO:root:PassingDataObject: nmdc:585d259b4b8a00826af403fbfcb2b8f7 +INFO:root:PassingDataObject: nmdc:dd117ac046c68bef1f7730a298dbed5e +INFO:root:PassingDataObject: nmdc:22040cdd5b92a595f1f7162fc1d0e747 +INFO:root:PassingDataObject: nmdc:ede5408e6348c51c6ec14375012e3fdd +INFO:root:PassingDataObject: nmdc:368f91e102c552bf8151c130ef17dc7d +INFO:root:PassingDataObject: nmdc:ebd796ba13737b7e19ba0191a8857791 +INFO:root:PassingDataObject: nmdc:c9410420dd3d38cd955a4fe0ff449185 +INFO:root:PassingDataObject: nmdc:2a5ae1247869778c85220583b37b3307 +INFO:root:PassingDataObject: nmdc:cd336d650b8e3a4235eed1ae497636d3 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452562 +INFO:root:found 2 records +INFO:root:record: nmdc:45063108b831737e2910ee772abfb7e3, Assembly Activity for nmdc:mga0fr0v43 +INFO:root:PassingDataObject: nmdc:c2e2c008f085204aa737b08bd001516f +INFO:root:PassingDataObject: nmdc:70d8ebba65edb7f6b11bad2531770a3d +INFO:root:PassingDataObject: nmdc:134e30293aa78c8212b3c21b5dc456a6 +INFO:root:PassingDataObject: nmdc:7fc338d867832688ae6db2040f7f9d8e +INFO:root:PassingDataObject: nmdc:2d8c7d920fae962f95345cf6bf1b63ad +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:c741e7ece6da4d44c85ccf65f83074e8, Assembly Activity for nmdc:mga0n2eb16 +INFO:root:PassingDataObject: nmdc:8a30035a2b97204209c5421f646f0b55 +INFO:root:PassingDataObject: nmdc:eb88253ea55e2a899e3c00aca318ee2c +INFO:root:PassingDataObject: nmdc:95e6d84aaf553bc4f4b1b466247b69aa +INFO:root:PassingDataObject: nmdc:db972ab9c28a4b426c04e4944605d840 +INFO:root:PassingDataObject: nmdc:18b07874bb038e8b36489351890b768b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452562 +INFO:root:found 2 records +INFO:root:record: nmdc:c741e7ece6da4d44c85ccf65f83074e8, Annotation Activity for nmdc:mga0n2eb16 +INFO:root:PassingDataObject: nmdc:8d2876c62b26bd0d9513e6fdb79590ed +INFO:root:PassingDataObject: nmdc:693aff6f8c7016d0307c56c2f0c8855a +INFO:root:PassingDataObject: nmdc:bdb1ca750999dae96fcae1caf7b71a05 +INFO:root:PassingDataObject: nmdc:37f86e4dd5e0818c1ac13a0c966c86c0 +INFO:root:PassingDataObject: nmdc:1d7c29e890387e179f747fcb8fc2f665 +INFO:root:PassingDataObject: nmdc:334713ad9b38e333916f7b9b3a44c3f1 +INFO:root:PassingDataObject: nmdc:7b1ae814026e882f813f983657eaf94f +INFO:root:PassingDataObject: nmdc:ac5e70d3721670755b2a09519d5ffa7e +INFO:root:PassingDataObject: nmdc:0cb5fda389a59d88d0d885e998a5369c +INFO:root:PassingDataObject: nmdc:b4c9667582460b72a892d407b124629b +INFO:root:PassingDataObject: nmdc:36d8fcd151a82eb5c4642afacd609249 +INFO:root:PassingDataObject: nmdc:9aee852f46a5c322cae07e010e4defd7 +INFO:root:PassingDataObject: nmdc:222f102896858cad2e923f3dcb7c55b0 +INFO:root:PassingDataObject: nmdc:452e3bad9c7bf1e24a77e57404b7c2cc +INFO:root:PassingDataObject: nmdc:5eedf6ac313f6248241b391ba5f58c86 +INFO:root:PassingDataObject: nmdc:8b1a1ec55f91c13d6d4dd4eace668a98 +INFO:root:PassingDataObject: nmdc:92de6ed8e874a98765f7b646e78136a8 +INFO:root:PassingDataObject: nmdc:edf196fdd6be04e6058edef007bd3629 +INFO:root:PassingDataObject: nmdc:732d5cd86ac3ca8c05ab2eccbe301824 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:c741e7ece6da4d44c85ccf65f83074e8 +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c741e7ece6da4d44c85ccf65f83074e8, Annotation Activity for nmdc:mga0n2eb16 +INFO:root:record: nmdc:45063108b831737e2910ee772abfb7e3, Annotation Activity for nmdc:mga0fr0v43 +INFO:root:PassingDataObject: nmdc:b7508d24dbcb6f6f7e9004a63f285ed5 +INFO:root:PassingDataObject: nmdc:4fd886b5e3296e5f7175b1b1d2ac866d +INFO:root:PassingDataObject: nmdc:965d9a4a2eb73598086dd6007fa95f0a +INFO:root:PassingDataObject: nmdc:e07702a70ad4dfd4cf74f9d017f663e3 +INFO:root:PassingDataObject: nmdc:08c71ecff4dfdce6d96303fc8a1951ed +INFO:root:PassingDataObject: nmdc:62d198001ebc0ecdc6ae93d79af78e24 +INFO:root:PassingDataObject: nmdc:eafe566221100a62b80d52fb3afb9b53 +INFO:root:PassingDataObject: nmdc:63fc35a1356524f0c2bd19dfc607aff8 +INFO:root:PassingDataObject: nmdc:3539764a66301578c4b3d369095e2aff +INFO:root:PassingDataObject: nmdc:e6859b3eeceb7c010acbf3315341550a +INFO:root:PassingDataObject: nmdc:1f63f9d74272624b8629251095c896e0 +INFO:root:PassingDataObject: nmdc:7a29e7f471eb8c9b89cc29812d421323 +INFO:root:PassingDataObject: nmdc:36732d818a1a8f6ac343a75906a7c1e7 +INFO:root:PassingDataObject: nmdc:f002c5f9c96b6ec19eadf90974be5925 +INFO:root:PassingDataObject: nmdc:e933ed140e3359b8d61de9ff9f3c5b13 +INFO:root:PassingDataObject: nmdc:d0e102fb903d2b46f21ed858293132c5 +INFO:root:PassingDataObject: nmdc:9b657c4bdc37660a7747afb12f987906 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:45063108b831737e2910ee772abfb7e3 +ERROR:root:FailedDataObject: nmdc:c2d49752138ba4630aa2357ed637ac98, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:45063108b831737e2910ee772abfb7e3, Annotation Activity for nmdc:mga0fr0v43 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452562 +INFO:root:found 2 records +INFO:root:record: nmdc:45063108b831737e2910ee772abfb7e3, MAGs Analysis Activity for nmdc:mga0fr0v43 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:45063108b831737e2910ee772abfb7e3 +ERROR:root:FailedDataObject: nmdc:5200ed61f4489dcd25dcffc0e221e383, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:45063108b831737e2910ee772abfb7e3, MAGs Analysis Activity for nmdc:mga0fr0v43 +INFO:root:record: nmdc:c741e7ece6da4d44c85ccf65f83074e8, MAGs Analysis Activity for nmdc:mga0n2eb16 +INFO:root:PassingDataObject: nmdc:67a454b4668e2f5f00b947f32f913001 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:c741e7ece6da4d44c85ccf65f83074e8 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c741e7ece6da4d44c85ccf65f83074e8, MAGs Analysis Activity for nmdc:mga0n2eb16 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452562 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-nf25mq76 +INFO:root:legacy_id: gold:Gp0452645 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-nf25mq76 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c9c2b74e4eca5464c22545e0c214752d +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fb9059a947fe1a4ff8df6bc03cd501c9 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452645 +INFO:root:found 2 records +INFO:root:record: nmdc:a59eabd0e8db246276b42ecd0f4ed737, Read QC Activity for nmdc:mga0dzeh09 +INFO:root:PassingDataObject: nmdc:a2d799a89b763357f51cdee9ce601c48 +INFO:root:PassingDataObject: nmdc:6766bada340e1152ba352a00acff57c8 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:b248efe793fc73739e82694dc7577dfd, Read QC Activity for nmdc:mga0e97d43 +INFO:root:PassingDataObject: nmdc:3b85179748048f404ff96e65d45956bc +INFO:root:PassingDataObject: nmdc:3bd5b7f86ccd9d4bdaf76fd31a90d15a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452645 +INFO:root:found 2 records +INFO:root:record: nmdc:a59eabd0e8db246276b42ecd0f4ed737, ReadBased Analysis Activity for nmdc:mga0dzeh09 +INFO:root:PassingDataObject: nmdc:54f0d009fcb98c9b05f55ce2236ef5c6 +INFO:root:PassingDataObject: nmdc:4afe63ca4ed7626567ff0f04fe65e45c +INFO:root:PassingDataObject: nmdc:1850bc1d9c1d8a8e547fc496db238d97 +INFO:root:PassingDataObject: nmdc:4331ce77f60a074ce6c144d2110352ef +INFO:root:PassingDataObject: nmdc:cac7c77b3ae088d9be6fd0ee41e63d16 +INFO:root:PassingDataObject: nmdc:516e139836e03b10aa59e8c27f74467b +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:a59eabd0e8db246276b42ecd0f4ed737 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:a59eabd0e8db246276b42ecd0f4ed737 +ERROR:root:FailedDataObject: nmdc:21c9e9dc065a4e44661810c3a5a8b27b, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a59eabd0e8db246276b42ecd0f4ed737, ReadBased Analysis Activity for nmdc:mga0dzeh09 +INFO:root:record: nmdc:b248efe793fc73739e82694dc7577dfd, ReadBased Analysis Activity for nmdc:mga0e97d43 +INFO:root:PassingDataObject: nmdc:a86f535b671769b18518d89839ff5dca +INFO:root:PassingDataObject: nmdc:37853e49d8fbd27798ddd9562f8b0f0b +INFO:root:PassingDataObject: nmdc:ad11b0f28e3b5f0f4a1e0007a4e56ee6 +INFO:root:PassingDataObject: nmdc:c986bb4f41dcca0bf621d98a6f39d666 +INFO:root:PassingDataObject: nmdc:b10bcfffd53f2a4e935a263acc2ba465 +INFO:root:PassingDataObject: nmdc:c78cccc7712aa0c266d3900d01832eff +INFO:root:PassingDataObject: nmdc:0aed81c0b6e16bd3718d4259eff27259 +INFO:root:PassingDataObject: nmdc:dbdd5e0998c863d3cf34a4eacfcb7a26 +INFO:root:PassingDataObject: nmdc:0b3cc4a82f3f85336ffaf55bb9fb4611 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452645 +INFO:root:found 2 records +INFO:root:record: nmdc:a59eabd0e8db246276b42ecd0f4ed737, Assembly Activity for nmdc:mga0dzeh09 +INFO:root:PassingDataObject: nmdc:3926e04f90a72b57d0de0aa236b05339 +INFO:root:PassingDataObject: nmdc:310897e8277561a653e87a02a9adbbbc +INFO:root:PassingDataObject: nmdc:e0cd4e7944948623e47468273a3ff0ad +INFO:root:PassingDataObject: nmdc:3a550318d40618d69ec05933da82a22b +INFO:root:PassingDataObject: nmdc:cc2e278bbd1c1b32bc6638266ab88597 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:b248efe793fc73739e82694dc7577dfd, Assembly Activity for nmdc:mga0e97d43 +INFO:root:PassingDataObject: nmdc:a3632b3b9e1822d992731af0826a31b9 +INFO:root:PassingDataObject: nmdc:77ddfcbc5c0b8302f75528488bc38d3c +INFO:root:PassingDataObject: nmdc:4df408674128b6f288ce92e61373ee06 +INFO:root:PassingDataObject: nmdc:7af123026f591ee063efd36ab8b75d75 +INFO:root:PassingDataObject: nmdc:889859a036cc1528ff7bae7b9df5eb3e +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452645 +INFO:root:found 2 records +INFO:root:record: nmdc:a59eabd0e8db246276b42ecd0f4ed737, Annotation Activity for nmdc:mga0dzeh09 +INFO:root:PassingDataObject: nmdc:043ff992b20e78ae09c1de86479611a6 +INFO:root:PassingDataObject: nmdc:c724cf42c0dc2b64861a4a06acbc5356 +INFO:root:PassingDataObject: nmdc:5dcbdd39f27fcf8cf5fb119feec0f96b +INFO:root:PassingDataObject: nmdc:d327b7b06d048f37c64e55989ce31c2e +INFO:root:PassingDataObject: nmdc:1ba1557af79c1c5264102562f9ae287f +INFO:root:PassingDataObject: nmdc:edf2f50d68527fb87e7c9171f9c46678 +INFO:root:PassingDataObject: nmdc:82d302b77c9f1497b84e699979348837 +INFO:root:PassingDataObject: nmdc:36493b97016c70c473deacb9630cd0a8 +INFO:root:PassingDataObject: nmdc:9056bcfccd6619223b22447cee4491cf +INFO:root:PassingDataObject: nmdc:9621862fdd9206b4413de209a8e7886a +INFO:root:PassingDataObject: nmdc:8afdf37d76f35c1482b6e01bd2d95f22 +INFO:root:PassingDataObject: nmdc:265e2cd908ddf4a134464b0a9bd621bb +INFO:root:PassingDataObject: nmdc:631370c595090350f873cdff4c0a709b +INFO:root:PassingDataObject: nmdc:59794c86302b2e6c36cdde4566c7add9 +INFO:root:PassingDataObject: nmdc:c3b498874ce8d27e09090ff24922547e +INFO:root:PassingDataObject: nmdc:9c2ffe7e229e7f2a462861978daf6182 +INFO:root:PassingDataObject: nmdc:46348aa0a0d2c63c40cb42633e6f6e38 +INFO:root:PassingDataObject: nmdc:8e6585f72c434061fed94e181ce0bde0 +INFO:root:PassingDataObject: nmdc:c4e692b16d6708d8cf1fad310e83b04e +INFO:root:PassingDataObject: nmdc:9b87dba0b6590d9a3faebabfcafec9e6 +INFO:root:PassingDataObject: nmdc:5189863d4c8455aca11c4e523b1f4ccb +INFO:root:PassingDataObject: nmdc:3a5037ac28459ba7ca182c395bf941bd +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:b248efe793fc73739e82694dc7577dfd, Annotation Activity for nmdc:mga0e97d43 +INFO:root:PassingDataObject: nmdc:60d17be25a7610f0a0809aa8bcd66029 +INFO:root:PassingDataObject: nmdc:6fb5ac3edfba8100a607eb2c5d350cc1 +INFO:root:PassingDataObject: nmdc:7e5cc4191a27400f2aa0dc8a68aeae8c +INFO:root:PassingDataObject: nmdc:c8ea4bb5262190ce0434d89487530c17 +INFO:root:PassingDataObject: nmdc:5c8f3f42e5e56d938af5b9a49dcb0474 +INFO:root:PassingDataObject: nmdc:7b06632f5b18ffda818a89f13ea601c0 +INFO:root:PassingDataObject: nmdc:a453fc3cee2cd0ca7236909dfa6604ff +INFO:root:PassingDataObject: nmdc:ac8e997fc6fe370aafea8df817308e7c +INFO:root:PassingDataObject: nmdc:172bf0b22f20579fa29c8547a7cc2f62 +INFO:root:PassingDataObject: nmdc:078a5164e08bf84ac900369a4a219f26 +INFO:root:PassingDataObject: nmdc:1cbfed5d99eed3a32ca72cfb3e92e70d +INFO:root:PassingDataObject: nmdc:de41903943c52d69d2dc620f7abfc011 +INFO:root:PassingDataObject: nmdc:52806cff460864a6d080c9bf9a562ba6 +INFO:root:PassingDataObject: nmdc:7b673c066ee85cb7e6faa58558f7166e +INFO:root:PassingDataObject: nmdc:048f89e0221af24af197195a16b65c87 +INFO:root:PassingDataObject: nmdc:9dbcda36acbc42b12aa540634f32b3ec +INFO:root:PassingDataObject: nmdc:fd61d2e9fadcaac386c7706cf8c4fadb +INFO:root:PassingDataObject: nmdc:df963a226afee11e31f61d32965ab759 +INFO:root:PassingDataObject: nmdc:daf9b1711139182e54b78d759c82c2b7 +INFO:root:PassingDataObject: nmdc:ba734413bc95d107ed4fd2b29adaee20 +INFO:root:PassingDataObject: nmdc:efa43535123e6c854ae2693645dc65b6 +INFO:root:PassingDataObject: nmdc:5d00054f048c8b7ac3d2c8186f158ad4 +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452645 +INFO:root:found 2 records +INFO:root:record: nmdc:a59eabd0e8db246276b42ecd0f4ed737, MAGs Analysis Activity for nmdc:mga0dzeh09 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a59eabd0e8db246276b42ecd0f4ed737 +ERROR:root:FailedDataObject: nmdc:8e297a0cbfe34fb9f47d874c09a9996a, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a59eabd0e8db246276b42ecd0f4ed737, MAGs Analysis Activity for nmdc:mga0dzeh09 +INFO:root:record: nmdc:b248efe793fc73739e82694dc7577dfd, MAGs Analysis Activity for nmdc:mga0e97d43 +INFO:root:PassingDataObject: nmdc:1a353df09e29c7d89ac4c9937e30c898 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:b248efe793fc73739e82694dc7577dfd +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b248efe793fc73739e82694dc7577dfd, MAGs Analysis Activity for nmdc:mga0e97d43 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452645 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-t7yc2d58 +INFO:root:legacy_id: gold:Gp0452665 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-t7yc2d58 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:eb49c788b02c91f5e797271546928553 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452665 +INFO:root:found 1 records +INFO:root:record: nmdc:87cef3b0e90086303369a22d8ef93840, Read QC Activity for nmdc:mga0m2r490 +INFO:root:PassingDataObject: nmdc:299cb8b39650d19b2c8a439a1aa94990 +INFO:root:PassingDataObject: nmdc:d94ed0cb34ba5af9c51580746a5abc81 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452665 +INFO:root:found 1 records +INFO:root:record: nmdc:87cef3b0e90086303369a22d8ef93840, ReadBased Analysis Activity for nmdc:mga0m2r490 +INFO:root:PassingDataObject: nmdc:a90e3f3eb07510e547feea08e0c6da32 +INFO:root:PassingDataObject: nmdc:8e32e348fa1c87252b2afe5edfa80172 +INFO:root:PassingDataObject: nmdc:546d7f5d2db1146cde5b1265dd9461f8 +INFO:root:PassingDataObject: nmdc:b53d8c2b09ab1f1a23adb9e21babed5b +INFO:root:PassingDataObject: nmdc:ece566592a0259407ba669b71b068623 +INFO:root:PassingDataObject: nmdc:8920a7c93663984ee3b6db6e0c468f46 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:87cef3b0e90086303369a22d8ef93840 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:87cef3b0e90086303369a22d8ef93840 +ERROR:root:FailedDataObject: nmdc:f2dda6f7b813dc294baaf5b514a6d4f3, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:87cef3b0e90086303369a22d8ef93840, ReadBased Analysis Activity for nmdc:mga0m2r490 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452665 +INFO:root:found 1 records +INFO:root:record: nmdc:87cef3b0e90086303369a22d8ef93840, Assembly Activity for nmdc:mga0m2r490 +INFO:root:PassingDataObject: nmdc:ab662bd5e1531a33befe5e35fc864ab9 +INFO:root:PassingDataObject: nmdc:401760e30807b5f7083f93cc8a7afe36 +INFO:root:PassingDataObject: nmdc:ab5139f0d73eed5a4baf4a93c947ebb8 +INFO:root:PassingDataObject: nmdc:f0b3a09995c876dd7192e8dac8079a75 +INFO:root:PassingDataObject: nmdc:a4609f1a945b9419603a08f12c703df5 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452665 +INFO:root:found 1 records +INFO:root:record: nmdc:87cef3b0e90086303369a22d8ef93840, Annotation Activity for nmdc:mga0m2r490 +INFO:root:PassingDataObject: nmdc:81a468daa8fb58349f7e8be9665488f1 +INFO:root:PassingDataObject: nmdc:7be8ec6c4fe91a6671ad97bd244c46df +INFO:root:PassingDataObject: nmdc:4ae7e15b93eddb897ed47acd9ef40cd6 +INFO:root:PassingDataObject: nmdc:66e4a5e3307ff556cc65be220b6e5df7 +INFO:root:PassingDataObject: nmdc:4af45ef11db9bf91397ad83faf193c69 +INFO:root:PassingDataObject: nmdc:c629bcfbbb0bfd91b54dea7b9be02067 +INFO:root:PassingDataObject: nmdc:55328f103f4e0f7aea5aab154d328df1 +INFO:root:PassingDataObject: nmdc:2519271fc64b33a155301594521396ec +INFO:root:PassingDataObject: nmdc:46e743724f16f1eb57d5db82a3175f69 +INFO:root:PassingDataObject: nmdc:8aa452bb44733c64f298ab124dd540ed +INFO:root:PassingDataObject: nmdc:453b3c293479dd5fd37def99dccc1df4 +INFO:root:PassingDataObject: nmdc:c229f00eb7318b10f1889a080bb78857 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:87cef3b0e90086303369a22d8ef93840 +ERROR:root:FailedDataObject: nmdc:c0ccf5d3707b05510060cff316971459, +ERROR:root:FailedDataObject: nmdc:b3bd75d688b167c3c39b0da99792abd0, +ERROR:root:failing_data_objects: 14 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:87cef3b0e90086303369a22d8ef93840, Annotation Activity for nmdc:mga0m2r490 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452665 +INFO:root:found 1 records +INFO:root:record: nmdc:87cef3b0e90086303369a22d8ef93840, MAGs Analysis Activity for nmdc:mga0m2r490 +INFO:root:PassingDataObject: nmdc:ca0f9c3b1fded5d5c76c11ce7ed9b6d1 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:87cef3b0e90086303369a22d8ef93840 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:87cef3b0e90086303369a22d8ef93840, MAGs Analysis Activity for nmdc:mga0m2r490 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452665 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-a45knz19 +INFO:root:legacy_id: gold:Gp0452577 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-a45knz19 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:473f58f1ab6280b300adf45019663601 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6cda844d1d31a460881d80b32a78e863 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7ca6741ad01fb892d2a5727865d2de3b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:83f3ee12a86cf165c4872e417dbbdefc +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452577 +INFO:root:found 4 records +INFO:root:record: nmdc:09569ed1a3893ae1794594a607b3a533, Read QC Activity for nmdc:mga0k88418 +INFO:root:PassingDataObject: nmdc:274957c8fbb4ad1d4314759d6046f6cc +INFO:root:PassingDataObject: nmdc:9febe0aee411cc17e3ec281f53b17bfe +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:e84ddf639f384a465187790f912b9413, Read QC Activity for nmdc:mga0qcab52 +INFO:root:PassingDataObject: nmdc:93e6de04b82b739b90043170218cd7a3 +INFO:root:PassingDataObject: nmdc:365b2327db163ad0fc4e2372987453fc +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:fa44e86b0cd0646a44cbb116a7966932, Read QC Activity for nmdc:mga0qab119 +INFO:root:PassingDataObject: nmdc:fa1c27ec62293baee85ded6046f9b821 +INFO:root:PassingDataObject: nmdc:0d954dc91aa7adb3d780804967912a9d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:1abbb2faf6f45ab89ca5f364833c4020, Read QC Activity for nmdc:mga0er5172 +INFO:root:PassingDataObject: nmdc:f2bcc4e84e139ecd9602f6b680925008 +INFO:root:PassingDataObject: nmdc:5a6c8fad72db0704cf3dc50eac77ba93 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452577 +INFO:root:found 4 records +INFO:root:record: nmdc:1abbb2faf6f45ab89ca5f364833c4020, ReadBased Analysis Activity for nmdc:mga0er5172 +INFO:root:PassingDataObject: nmdc:fdb062a3c1f0adc50544e1a9196cb7ef +INFO:root:PassingDataObject: nmdc:206f943814a0d03e6ec55af632611242 +INFO:root:PassingDataObject: nmdc:4aa7050d9fa95cdca9c5f90aa64dab53 +INFO:root:PassingDataObject: nmdc:77fd352e093eec6818de9845015c8478 +INFO:root:PassingDataObject: nmdc:05d85c25bb977dd20554a96119a92627 +INFO:root:PassingDataObject: nmdc:eca6ad1173296d6e9c964f9f5bdab916 +INFO:root:PassingDataObject: nmdc:63edd4bee36cce035c540dcf75217ddf +INFO:root:PassingDataObject: nmdc:3211fffd64515db985e2f7d542b4b4f0 +INFO:root:PassingDataObject: nmdc:b5487958e8ad11f9ba0faef18726cd11 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:fa44e86b0cd0646a44cbb116a7966932, ReadBased Analysis Activity for nmdc:mga0qab119 +INFO:root:PassingDataObject: nmdc:10686d2928ef785a0bf243d524431a32 +INFO:root:PassingDataObject: nmdc:d3edf791c8bb1e1dbd2b820de820ff2b +INFO:root:PassingDataObject: nmdc:59e356276c88b284d2bb32de9c27092b +INFO:root:PassingDataObject: nmdc:b7c5b9a96c7a305d78c16ab8954c3cb0 +INFO:root:PassingDataObject: nmdc:81fce541fb457bc51e33fde8048bf4e3 +INFO:root:PassingDataObject: nmdc:21dab2fc684cb5a797c0666576cd3764 +INFO:root:PassingDataObject: nmdc:47c19a851d73209b80cd8cd16feb5236 +INFO:root:PassingDataObject: nmdc:948994b5b1c2ebefccfd86db64944f73 +INFO:root:PassingDataObject: nmdc:3e1878a721cc364a3b365cbf7de7c24a +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:09569ed1a3893ae1794594a607b3a533, ReadBased Analysis Activity for nmdc:mga0k88418 +INFO:root:PassingDataObject: nmdc:ac5947a5291f79f344ea638dfbcb54b0 +INFO:root:PassingDataObject: nmdc:5196ec0e821c81ff9e8fc20f28f59dfa +INFO:root:PassingDataObject: nmdc:90af616b6d4a4deb155066d2d3893185 +INFO:root:PassingDataObject: nmdc:f87518e05bad4c0186845612d0203be9 +INFO:root:PassingDataObject: nmdc:73183cc428e2b062128517994681c81c +INFO:root:PassingDataObject: nmdc:1acae73389af5b10afe8892a92e501f4 +INFO:root:PassingDataObject: nmdc:ac6f7a920edbaff4c13e5ba35ae0f157 +INFO:root:PassingDataObject: nmdc:edaf033d6dcb44365b1f615677195379 +INFO:root:PassingDataObject: nmdc:5bf1b3c3b55909c2aee196a53a58042b +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:e84ddf639f384a465187790f912b9413, ReadBased Analysis Activity for nmdc:mga0qcab52 +INFO:root:PassingDataObject: nmdc:785fdcb2628153e77539a3419e4526b1 +INFO:root:PassingDataObject: nmdc:f33587bf961a9fa3d74e65b1e38bb939 +INFO:root:PassingDataObject: nmdc:8d14578784d2e2cfa81e6a88e7fa40b7 +INFO:root:PassingDataObject: nmdc:f38ec84882ac41ed3696ebd438eb45e2 +INFO:root:PassingDataObject: nmdc:faa6c8d896eea20426df420bd1df011f +INFO:root:PassingDataObject: nmdc:4574c77bffd5954ac1c6946d12a0833b +INFO:root:PassingDataObject: nmdc:428846c1cc124012f10a82b2437e130f +INFO:root:PassingDataObject: nmdc:514ff341732fb2537d330805a1e66e67 +INFO:root:PassingDataObject: nmdc:91241a3441221661499d49a875dc9668 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 4 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452577 +INFO:root:found 4 records +INFO:root:record: nmdc:09569ed1a3893ae1794594a607b3a533, Assembly Activity for nmdc:mga0k88418 +INFO:root:PassingDataObject: nmdc:148fb7477083cd524c566ae2f0b4982e +INFO:root:PassingDataObject: nmdc:b252ccaa7cc507ed5edb4e036eac7bcf +INFO:root:PassingDataObject: nmdc:eecde64269df15d4b667078f0dcf2ea5 +INFO:root:PassingDataObject: nmdc:ae1bf3bdad7bfc9c7fa9419f1cdd2902 +INFO:root:PassingDataObject: nmdc:6dbfb59a017d1e0e4e5cfaba002903f6 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:1abbb2faf6f45ab89ca5f364833c4020, Assembly Activity for nmdc:mga0er5172 +INFO:root:PassingDataObject: nmdc:1c85f3e43565346d688c0f096336be83 +INFO:root:PassingDataObject: nmdc:0df973ad7af28890464f6107dfb2beff +INFO:root:PassingDataObject: nmdc:0eb1b32a8f792b195e069353e4761c73 +INFO:root:PassingDataObject: nmdc:5b946296122e1848792b9771a2eed303 +INFO:root:PassingDataObject: nmdc:5eb5f6f82477ce908054c776ad78290d +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:e84ddf639f384a465187790f912b9413, Assembly Activity for nmdc:mga0qcab52 +INFO:root:PassingDataObject: nmdc:4db81e67b4797e7bed38879156eddbad +INFO:root:PassingDataObject: nmdc:ced228ae562f0ca43f5e76f1926285c6 +INFO:root:PassingDataObject: nmdc:65fb3f36f69b99e647000ad1ca41d78e +INFO:root:PassingDataObject: nmdc:a79869c90ae9d3655269fc73685a98c4 +INFO:root:PassingDataObject: nmdc:b0be83cb01a609d54aa529fdf4fc1f60 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:fa44e86b0cd0646a44cbb116a7966932, Assembly Activity for nmdc:mga0qab119 +INFO:root:PassingDataObject: nmdc:cbba93044ff381254b34c0844b0c7499 +INFO:root:PassingDataObject: nmdc:8ee8a8559472ec4752d7fc5f1353e65f +INFO:root:PassingDataObject: nmdc:34d61c03d6d75e12a343d928e762cd6f +INFO:root:PassingDataObject: nmdc:e07688535c422d78b48f08a1dab9dfc7 +INFO:root:PassingDataObject: nmdc:70e03a6700f09d8cf2799979a27bc2a0 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452577 +INFO:root:found 4 records +INFO:root:record: nmdc:e84ddf639f384a465187790f912b9413, Annotation Activity for nmdc:mga0qcab52 +INFO:root:PassingDataObject: nmdc:c45c21123c1fa76bec08f8f57ca1aa5d +INFO:root:PassingDataObject: nmdc:f6bb921fb52041ae62b6a4dd4a254dbd +INFO:root:PassingDataObject: nmdc:a7da14a6a9276990bcfa3ad9816e50d3 +INFO:root:PassingDataObject: nmdc:fe3da0f5a984090757c3eec24c9ffc7c +INFO:root:PassingDataObject: nmdc:d3303510635417e31beb51f3dc9d3e0c +INFO:root:PassingDataObject: nmdc:266ab63e5db58cc83f837da9fd96c0bc +INFO:root:PassingDataObject: nmdc:b88b9d3390ccdb5d2a052ae9931a00c7 +INFO:root:PassingDataObject: nmdc:4fbff5c2f25c239f914f24b970ed0cd8 +INFO:root:PassingDataObject: nmdc:6cc90afc45b61ae989b405aa893455fb +INFO:root:PassingDataObject: nmdc:2b29fe3fa9c1cfb52465f6c15354abc0 +INFO:root:PassingDataObject: nmdc:a4530a88b98ea89ba9ff9bb0897f4979 +INFO:root:PassingDataObject: nmdc:5f2a3986e9a183a949f1650b16f958fb +INFO:root:PassingDataObject: nmdc:5a674b8b3766a755a5d8711c0c8c51d1 +INFO:root:PassingDataObject: nmdc:7708335b974db39fcc121ad935c08508 +INFO:root:PassingDataObject: nmdc:c99a89be968ac7b5e8730f9790945f23 +INFO:root:PassingDataObject: nmdc:b53a3997412c75fc0cfaf80d1c64cf3f +INFO:root:PassingDataObject: nmdc:7a40a559acb2cacccef4dee78cf342c3 +INFO:root:PassingDataObject: nmdc:6a8d4ae5118ad60d09d167af02c143af +INFO:root:PassingDataObject: nmdc:3b86031c38e2df78c737608c593e16f2 +INFO:root:PassingDataObject: nmdc:8102046ac9d8c17cc70367739586a229 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:e84ddf639f384a465187790f912b9413 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e84ddf639f384a465187790f912b9413, Annotation Activity for nmdc:mga0qcab52 +INFO:root:record: nmdc:fa44e86b0cd0646a44cbb116a7966932, Annotation Activity for nmdc:mga0qab119 +INFO:root:PassingDataObject: nmdc:dd56849ada7f6cfbd9920d880f2422be +INFO:root:PassingDataObject: nmdc:094801e79bf661a77a048a26e93c0ff0 +INFO:root:PassingDataObject: nmdc:fb09abab68a944c208c95db76078da4b +INFO:root:PassingDataObject: nmdc:d826a76f7514bddc4bd41a335939d047 +INFO:root:PassingDataObject: nmdc:1717970ae3e57952477f68558cb2612d +INFO:root:PassingDataObject: nmdc:4fae87a1625679f371b699f3b5751443 +INFO:root:PassingDataObject: nmdc:ac92eb572e04ebcd525fd6ffa4febaae +INFO:root:PassingDataObject: nmdc:0f517ae74e15214ec002c350b74314b8 +INFO:root:PassingDataObject: nmdc:c53ca7f885e020ab424f15512c4bd8af +INFO:root:PassingDataObject: nmdc:6e08989bce8af5977056f03f8026af6c +INFO:root:PassingDataObject: nmdc:5014a0e0ad71dd416d0c3f079a0664bb +INFO:root:PassingDataObject: nmdc:287b3b133e9ed3e2e1e2c2ec0b459719 +INFO:root:PassingDataObject: nmdc:1b93716051253ab6840eaffe54ead9ff +INFO:root:PassingDataObject: nmdc:2a9588b2bde5ace0a6d905ecdfcd0768 +INFO:root:PassingDataObject: nmdc:cb89a0333f280dd9cc5c8e5fbb3e1d9c +INFO:root:PassingDataObject: nmdc:bad8ed6cf6cd698b0deed4229f6473f2 +INFO:root:PassingDataObject: nmdc:c7201704afe27d291f9d9f529f6ac64f +INFO:root:PassingDataObject: nmdc:a3e13e19eb4b542d89794528b3676e24 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:fa44e86b0cd0646a44cbb116a7966932 +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fa44e86b0cd0646a44cbb116a7966932, Annotation Activity for nmdc:mga0qab119 +INFO:root:record: nmdc:1abbb2faf6f45ab89ca5f364833c4020, Annotation Activity for nmdc:mga0er5172 +INFO:root:PassingDataObject: nmdc:08e5fa724c2c5db33a5f443b24ba9af8 +INFO:root:PassingDataObject: nmdc:8552ac879a31c36619e417ee3a5dac8e +INFO:root:PassingDataObject: nmdc:35f6cfed396cbfa816c0296b1fdd2d9a +INFO:root:PassingDataObject: nmdc:f3e4be3f13da41eb2892cbd95c68dcab +INFO:root:PassingDataObject: nmdc:57df8e5fd7c95476cf6012ce5cd160b8 +INFO:root:PassingDataObject: nmdc:4f4119a31a413eb16b2f4f6a1f60a54f +INFO:root:PassingDataObject: nmdc:74cb577c314a849fb87fc480dd8521f9 +INFO:root:PassingDataObject: nmdc:07e9b767c330c4cff37685e1a4ea32da +INFO:root:PassingDataObject: nmdc:e81e4c43164bb492b1d0dc6f7ad0eb79 +INFO:root:PassingDataObject: nmdc:9d3816fdbf87c0a070ca58d9c0e58929 +INFO:root:PassingDataObject: nmdc:1fa5ba8938f8976e024ee9a57125ee55 +INFO:root:PassingDataObject: nmdc:7dda09b91ffd390c1021d447b04edbff +INFO:root:PassingDataObject: nmdc:26a003934b2114869672a045b92dd79e +INFO:root:PassingDataObject: nmdc:e1b77d746321adc8457103ed530abcb5 +INFO:root:PassingDataObject: nmdc:71cda2c52330ae59c568f7989fb1f7da +INFO:root:PassingDataObject: nmdc:b075bbda93426f47a65dcc9fa43b32d4 +INFO:root:PassingDataObject: nmdc:739b21c3fc07b29d4599f653ccb8fd79 +INFO:root:PassingDataObject: nmdc:d86857731f8090f7455726f14b97f9ec +INFO:root:PassingDataObject: nmdc:41a0961c76798ce0e2d852089fbe9f12 +INFO:root:PassingDataObject: nmdc:fbf242cb03cff187db2b7ea4448d6f6f +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:1abbb2faf6f45ab89ca5f364833c4020 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1abbb2faf6f45ab89ca5f364833c4020, Annotation Activity for nmdc:mga0er5172 +INFO:root:record: nmdc:09569ed1a3893ae1794594a607b3a533, Annotation Activity for nmdc:mga0k88418 +INFO:root:PassingDataObject: nmdc:b341f93fbb2c4267b230104fe0fd6683 +INFO:root:PassingDataObject: nmdc:483d717ce7d2cfbc3ed128b4c72db446 +INFO:root:PassingDataObject: nmdc:ae3fcd780f20a09f3aedcfe06294e112 +INFO:root:PassingDataObject: nmdc:1cc7710fd5184bc80660111822e776a0 +INFO:root:PassingDataObject: nmdc:d4cac83624d47aa5d69c09265e538cc6 +INFO:root:PassingDataObject: nmdc:dc01be8375c63e195a6a14c7fd1f7153 +INFO:root:PassingDataObject: nmdc:1ecc36e553b8eeaf3cdaa1b08dfcc0fc +INFO:root:PassingDataObject: nmdc:fe133663d2f2e7e7ef4a2f320b0f974a +INFO:root:PassingDataObject: nmdc:691a42541384d970cd869e1d6c167302 +INFO:root:PassingDataObject: nmdc:a93736a0c1f9b5fde5580e7cc186d3dc +INFO:root:PassingDataObject: nmdc:a6f374158e8e6a9f3c7c5730fe36ec3f +INFO:root:PassingDataObject: nmdc:163c2b02059f99ccd1e55158d3bf2951 +INFO:root:PassingDataObject: nmdc:43478427d7497a3ae5fd091bc5918997 +INFO:root:PassingDataObject: nmdc:71519b6501bfc7c9cdd655824438454c +INFO:root:PassingDataObject: nmdc:cd7e4091b4d370e22a2b48979d2ee8ec +INFO:root:PassingDataObject: nmdc:323aa4703a211c203409ba9d28844ec8 +INFO:root:PassingDataObject: nmdc:9bbd5de063260ef43fcafaea08ebc92e +INFO:root:PassingDataObject: nmdc:932a02f1795392a3b9b1cf4d8dda39b8 +INFO:root:PassingDataObject: nmdc:2337015ba4a9cbae60040f00f2e33192 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:09569ed1a3893ae1794594a607b3a533 +ERROR:root:FailedDataObject: nmdc:ad7873f50d18752ea0892ff55ae918f2, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:09569ed1a3893ae1794594a607b3a533, Annotation Activity for nmdc:mga0k88418 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 4 +INFO:root:set_name: mags_activity_set for gold:Gp0452577 +INFO:root:found 4 records +INFO:root:record: nmdc:1abbb2faf6f45ab89ca5f364833c4020, MAGs Analysis Activity for nmdc:mga0er5172 +INFO:root:PassingDataObject: nmdc:d231e4f3433685e1e3ce881ae6a1e7db +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1abbb2faf6f45ab89ca5f364833c4020 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1abbb2faf6f45ab89ca5f364833c4020, MAGs Analysis Activity for nmdc:mga0er5172 +INFO:root:record: nmdc:09569ed1a3893ae1794594a607b3a533, MAGs Analysis Activity for nmdc:mga0k88418 +INFO:root:PassingDataObject: nmdc:3046c85dbfa9b86e2cab88e7c1c96391 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:09569ed1a3893ae1794594a607b3a533 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:09569ed1a3893ae1794594a607b3a533, MAGs Analysis Activity for nmdc:mga0k88418 +INFO:root:record: nmdc:e84ddf639f384a465187790f912b9413, MAGs Analysis Activity for nmdc:mga0qcab52 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e84ddf639f384a465187790f912b9413 +ERROR:root:FailedDataObject: nmdc:a2f1faf379f83286f253f529faa44a23, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e84ddf639f384a465187790f912b9413, MAGs Analysis Activity for nmdc:mga0qcab52 +INFO:root:record: nmdc:fa44e86b0cd0646a44cbb116a7966932, MAGs Analysis Activity for nmdc:mga0qab119 +INFO:root:PassingDataObject: nmdc:24592418c8bf293420bd6c7b0a58da60 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fa44e86b0cd0646a44cbb116a7966932 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fa44e86b0cd0646a44cbb116a7966932, MAGs Analysis Activity for nmdc:mga0qab119 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452577 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-rywm8f71 +INFO:root:legacy_id: gold:Gp0452748 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-rywm8f71 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:39b73cafb6476a8a45388fb7ea1cacfc +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452748 +INFO:root:found 1 records +INFO:root:record: nmdc:fc86db3a92fe04c92523d1a883adacb4, Read QC Activity for nmdc:mga0t32339 +INFO:root:PassingDataObject: nmdc:0968965db4f38b31ff41c68350741aff +INFO:root:PassingDataObject: nmdc:179db7858d72353b1a067cc4239c852c +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452748 +INFO:root:found 1 records +INFO:root:record: nmdc:fc86db3a92fe04c92523d1a883adacb4, ReadBased Analysis Activity for nmdc:mga0t32339 +INFO:root:PassingDataObject: nmdc:1f8a92229c0f67f242db307b234ef984 +INFO:root:PassingDataObject: nmdc:787791ae78d13ba436650c60ad590cc9 +INFO:root:PassingDataObject: nmdc:915f826d7128d9d05554897a77fe9d0f +INFO:root:PassingDataObject: nmdc:c90fbed739e4d08902547e05819c14cf +INFO:root:PassingDataObject: nmdc:e00c0ae1355664bf5977fbf14d432d87 +INFO:root:PassingDataObject: nmdc:db12210408e6a29d334d26ced14200d0 +INFO:root:PassingDataObject: nmdc:3194acfd2cc0afe543addd11f4b8ad11 +INFO:root:PassingDataObject: nmdc:a853aef448a75780eeb3744297c0758b +INFO:root:PassingDataObject: nmdc:bbbe0b8cf15744cb0e3119081a5e97ea +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452748 +INFO:root:found 1 records +INFO:root:record: nmdc:fc86db3a92fe04c92523d1a883adacb4, Assembly Activity for nmdc:mga0t32339 +INFO:root:PassingDataObject: nmdc:f40376be50ce365eda4d6d3e71bd62d1 +INFO:root:PassingDataObject: nmdc:380cbc38e9523baa7dc79131ba283eab +INFO:root:PassingDataObject: nmdc:93014ac73ae6b72053b8f5d61cf93987 +INFO:root:PassingDataObject: nmdc:8460acbbbfb010be79ae976fff657987 +INFO:root:PassingDataObject: nmdc:4d6b9f79e997994f4b7563c6116342cc +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452748 +INFO:root:found 1 records +INFO:root:record: nmdc:fc86db3a92fe04c92523d1a883adacb4, Annotation Activity for nmdc:mga0t32339 +INFO:root:PassingDataObject: nmdc:be5cfc5cb8c8ca7ba0324990c7363196 +INFO:root:PassingDataObject: nmdc:241203d7ce314f9d492064e0e5565aa9 +INFO:root:PassingDataObject: nmdc:3c570cbf1f38a026eb8ffdf2475e3bc9 +INFO:root:PassingDataObject: nmdc:80603b9d2ad52516303a6c839c59ae39 +INFO:root:PassingDataObject: nmdc:74bb3149635118a8dcbea9023834d588 +INFO:root:PassingDataObject: nmdc:f0fac471db7fed735408673a730e3f3e +INFO:root:PassingDataObject: nmdc:3131361c187208facf0072cf82e1b820 +INFO:root:PassingDataObject: nmdc:c87b6bee41d4405d5997df81e14b028f +INFO:root:PassingDataObject: nmdc:beae2ba58110b7ff34fc225b9e8661ed +INFO:root:PassingDataObject: nmdc:2d33c3411a7f07c65828cfa968da28b5 +INFO:root:PassingDataObject: nmdc:80d24ee43640b44dc095b086318e02a9 +INFO:root:PassingDataObject: nmdc:cf6bf05bc9ea5b723bbb259837d097a8 +INFO:root:PassingDataObject: nmdc:7ddbcc58ee758e2dcc6d738e2e0f8264 +INFO:root:PassingDataObject: nmdc:a6ff6492ad2bcaffbd09f39d563c4000 +INFO:root:PassingDataObject: nmdc:219a34d18148252a2c05972c2cb99869 +INFO:root:PassingDataObject: nmdc:69f2c11524376ffc5da36e3b472964a7 +INFO:root:PassingDataObject: nmdc:b3220050ee7c38bb4fc7b2c1dff12530 +INFO:root:PassingDataObject: nmdc:785105a4817684513b2224b24ee7fa9e +INFO:root:PassingDataObject: nmdc:7235ef0b4922d48ac1d564064a63fda0 +INFO:root:PassingDataObject: nmdc:d371694435fea77bdda32e49927a0254 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:fc86db3a92fe04c92523d1a883adacb4 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fc86db3a92fe04c92523d1a883adacb4, Annotation Activity for nmdc:mga0t32339 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452748 +INFO:root:found 1 records +INFO:root:record: nmdc:fc86db3a92fe04c92523d1a883adacb4, MAGs Analysis Activity for nmdc:mga0t32339 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fc86db3a92fe04c92523d1a883adacb4 +ERROR:root:FailedDataObject: nmdc:ddaf420fd99f31859dfa05988c414e2d, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fc86db3a92fe04c92523d1a883adacb4, MAGs Analysis Activity for nmdc:mga0t32339 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452748 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-jsd04s96 +INFO:root:legacy_id: gold:Gp0452673 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-jsd04s96 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fa4e5b34cc9ce179d4a384965958c9d5 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4f6f7718bdcc88c970570a05fba9cb81 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452673 +INFO:root:found 2 records +INFO:root:record: nmdc:8b3939c498c82e712b626eca334129eb, Read QC Activity for nmdc:mga0qzvc92 +INFO:root:PassingDataObject: nmdc:f2d1ca4660568e0a8d6a3f841599bcac +INFO:root:PassingDataObject: nmdc:73775e4e61c83cf56d20aa4bd2955fcf +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:d572edff3ea3494589a5b16e87aeca04, Read QC Activity for nmdc:mga0763x02 +INFO:root:PassingDataObject: nmdc:6ac91b26a5f0686eb9ddbaf5c427a76a +INFO:root:PassingDataObject: nmdc:abf3dedd53b204a2675633ac78b6c1bf +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452673 +INFO:root:found 2 records +INFO:root:record: nmdc:8b3939c498c82e712b626eca334129eb, ReadBased Analysis Activity for nmdc:mga0qzvc92 +INFO:root:PassingDataObject: nmdc:706c62939f61a196cc4be1fc267df4da +INFO:root:PassingDataObject: nmdc:706b83666833f6644c6f753cbb8ed69c +INFO:root:PassingDataObject: nmdc:c6d776d788c6c59d5276d7612d02617f +INFO:root:PassingDataObject: nmdc:3fbf983d6b925ca946000d2c71fd78a9 +INFO:root:PassingDataObject: nmdc:1d6d845ae8818219c89b6a4b80ece3e5 +INFO:root:PassingDataObject: nmdc:89ba66f389a27cba074c0aa79b1a76f7 +INFO:root:PassingDataObject: nmdc:82fc698896326dd4f9d6dcfea0a47e37 +INFO:root:PassingDataObject: nmdc:6ccd990e1b1c8e6e10d542a662e798b1 +INFO:root:PassingDataObject: nmdc:dc71fdf955edbea71f93a4831a581f6a +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:d572edff3ea3494589a5b16e87aeca04, ReadBased Analysis Activity for nmdc:mga0763x02 +INFO:root:PassingDataObject: nmdc:0ca87b7f07320023fe8d8e77b716d82e +INFO:root:PassingDataObject: nmdc:1b4f156cfde190ada171e91f7989eaa7 +INFO:root:PassingDataObject: nmdc:1f962c47b41a833bec9c2ec8d5c241db +INFO:root:PassingDataObject: nmdc:5d494f8217a3495db0c0e7d7c60d1ecf +INFO:root:PassingDataObject: nmdc:c1a60ee674b49778bd3b304e301f78c9 +INFO:root:PassingDataObject: nmdc:c749f09e9e5233352c8cd94e18ff8410 +INFO:root:PassingDataObject: nmdc:2ca0815694b25719d3bd99db6d1f5afd +INFO:root:PassingDataObject: nmdc:b6466b42e28d8c4c124da87b8c28aa8a +INFO:root:PassingDataObject: nmdc:671fa703a23e79134092d29cdf5496e4 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452673 +INFO:root:found 2 records +INFO:root:record: nmdc:8b3939c498c82e712b626eca334129eb, Assembly Activity for nmdc:mga0qzvc92 +INFO:root:PassingDataObject: nmdc:2332bfc5f90c5760a2bb8a3193bfee56 +INFO:root:PassingDataObject: nmdc:95ab556e4299ffcbe68f61e6168ea7a5 +INFO:root:PassingDataObject: nmdc:04d9fe82894cf052cc9579ffc07c12c9 +INFO:root:PassingDataObject: nmdc:63047a196041f15dd314d88cd6a60916 +INFO:root:PassingDataObject: nmdc:cded8b787d0b180e8c322c2e7a24e7d6 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:d572edff3ea3494589a5b16e87aeca04, Assembly Activity for nmdc:mga0763x02 +INFO:root:PassingDataObject: nmdc:1d92c3eb476e792c66d3f206a0b2fbd0 +INFO:root:PassingDataObject: nmdc:79e4c492d892ba26da70cfe2a9c38a04 +INFO:root:PassingDataObject: nmdc:4d79338d7ee7794843ae0c5fef2b79db +INFO:root:PassingDataObject: nmdc:873428e1ed347a8b6d4fab1f24540d76 +INFO:root:PassingDataObject: nmdc:083425c1b6d68a07466036e586ac317f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452673 +INFO:root:found 2 records +INFO:root:record: nmdc:8b3939c498c82e712b626eca334129eb, Annotation Activity for nmdc:mga0qzvc92 +INFO:root:PassingDataObject: nmdc:5ec90a3575d03244c0c9d767acce6f84 +INFO:root:PassingDataObject: nmdc:01a77d532d3f93436cf89eadcb3b3e8d +INFO:root:PassingDataObject: nmdc:8ce779788e0f342ed7a55d30336165bf +INFO:root:PassingDataObject: nmdc:11d41876ef75371e690a388f96f952cc +INFO:root:PassingDataObject: nmdc:8e1ca41ee47198fbd232ca5435fa90c4 +INFO:root:PassingDataObject: nmdc:f8e6812ee0a1aa8fd39af2cf3ee5277b +INFO:root:PassingDataObject: nmdc:b8e3d25f54038f0c6fdfedb571a43c3b +INFO:root:PassingDataObject: nmdc:b0d6a2e5a46bf9d999f354efb27e6276 +INFO:root:PassingDataObject: nmdc:8b2509f68d072709e78718436dcf8392 +INFO:root:PassingDataObject: nmdc:2f799b7caf63e647edb67c43961f6603 +INFO:root:PassingDataObject: nmdc:c477b0d4f1fcb1777b36acd7b0b40c90 +INFO:root:PassingDataObject: nmdc:09a6e59dc94ce2a23e280658c0bfb8d7 +INFO:root:PassingDataObject: nmdc:cc64a8474218828c28c27e5e53c1320f +INFO:root:PassingDataObject: nmdc:2e7adfcab2b8763fe8711f25a9df947b +INFO:root:PassingDataObject: nmdc:e2b559d02879e15e6e5ed01e2af368a9 +INFO:root:PassingDataObject: nmdc:cbd954315ca5218d876a0df3a65cc429 +INFO:root:PassingDataObject: nmdc:65ef1e0b1489287911558223d7b56d4b +INFO:root:PassingDataObject: nmdc:f983a5d45601dba8c066897ac21ff304 +INFO:root:PassingDataObject: nmdc:4620b2b2a3f5da95a5ef2a76a7129976 +INFO:root:PassingDataObject: nmdc:e57ae38757ccb84f9cd435470a654e9b +INFO:root:PassingDataObject: nmdc:67cc7bdeba84ca8d77fe0244f50eb495 +INFO:root:PassingDataObject: nmdc:ba1fd7b18318b1ec1b193437e3272403 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:d572edff3ea3494589a5b16e87aeca04, Annotation Activity for nmdc:mga0763x02 +INFO:root:PassingDataObject: nmdc:48990d8da77c47df8490dc6d57a6c204 +INFO:root:PassingDataObject: nmdc:d0146581947d46c40298e07138dff51e +INFO:root:PassingDataObject: nmdc:448c5b6608e38319d43aa97121c18945 +INFO:root:PassingDataObject: nmdc:b47ad8b0fc3392eef0d7d747ce72930b +INFO:root:PassingDataObject: nmdc:87ac36aaf9fadc925966f1c41f3a28a6 +INFO:root:PassingDataObject: nmdc:4a72c9b9bc069f9433074f10c08ffded +INFO:root:PassingDataObject: nmdc:8e9cdcc2af1e31af3887afd6f4b8bd5a +INFO:root:PassingDataObject: nmdc:cdf8d83b04914e56fa4b41c6199b4aa2 +INFO:root:PassingDataObject: nmdc:bb22ede6d4cf512e23a588c6cab0dc96 +INFO:root:PassingDataObject: nmdc:db7416a720db8bb78625652e07aded37 +INFO:root:PassingDataObject: nmdc:dbbe67353b9b8c59ba9fdea692daae0a +INFO:root:PassingDataObject: nmdc:366f94fd4fbd233c3f969850f847a574 +INFO:root:PassingDataObject: nmdc:1dc3d7449778fcc650a34f5140b301c0 +INFO:root:PassingDataObject: nmdc:70b6dcbdb0a21b181432d14b2b34640a +INFO:root:PassingDataObject: nmdc:bfb773c34aca5882f9785ad094303495 +INFO:root:PassingDataObject: nmdc:93e85b7f7d257ae12a4bcb9e49076b02 +INFO:root:PassingDataObject: nmdc:61d45c1c158fc446a5cedf9a8b7cfe84 +INFO:root:PassingDataObject: nmdc:d1238cd0dad852528881c3021fe294e3 +INFO:root:PassingDataObject: nmdc:66b8198d374e690032d3b99de8f09e33 +INFO:root:PassingDataObject: nmdc:746e10845db3ebf1dbad7feca6b81073 +INFO:root:PassingDataObject: nmdc:f8c26f50a5bac972f9d3e818f2575343 +INFO:root:PassingDataObject: nmdc:5fce21e87cbccab71e4c06c57dab79a2 +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452673 +INFO:root:found 2 records +INFO:root:record: nmdc:8b3939c498c82e712b626eca334129eb, MAGs Analysis Activity for nmdc:mga0qzvc92 +INFO:root:PassingDataObject: nmdc:28b1af52163657eba65323624f455117 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:8b3939c498c82e712b626eca334129eb +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:8b3939c498c82e712b626eca334129eb, MAGs Analysis Activity for nmdc:mga0qzvc92 +INFO:root:record: nmdc:d572edff3ea3494589a5b16e87aeca04, MAGs Analysis Activity for nmdc:mga0763x02 +INFO:root:PassingDataObject: nmdc:147044991ab4c0b36d487b1051fafbae +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:d572edff3ea3494589a5b16e87aeca04 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d572edff3ea3494589a5b16e87aeca04, MAGs Analysis Activity for nmdc:mga0763x02 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452673 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-34xpn880 +INFO:root:legacy_id: gold:Gp0452677 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-34xpn880 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c73c4f6894e6b1dc38bf5d68a1ba9f6c +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9c284bb048e37e4caf6c40747f47c92d +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c92118ae8a3e4a0eddae5c85ca2e15be +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452677 +INFO:root:found 3 records +INFO:root:record: nmdc:2147ba8538d1767c047fd8ce93aa71ab, Read QC Activity for nmdc:mga07gx047 +INFO:root:PassingDataObject: nmdc:58434f0e8d4098db37f25b4f6369852e +INFO:root:PassingDataObject: nmdc:2321578bbf346a6f2b00eb3f3628598f +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:86ff61ecabbb7e9909006b2dd4e20702, Read QC Activity for nmdc:mga0cyqf35 +INFO:root:PassingDataObject: nmdc:c58e719a31a64467190fd09dbbdce646 +INFO:root:PassingDataObject: nmdc:f0fa0d4e224e5d4b6bf3cfbd736139b2 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:2f19f2500e1c10efcd4372dd3044fb52, Read QC Activity for nmdc:mga0fbpz25 +INFO:root:PassingDataObject: nmdc:531058f2e41baa7991e7e395b5b763ff +INFO:root:PassingDataObject: nmdc:da417da902d8d073cb3d871314e1f215 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452677 +INFO:root:found 3 records +INFO:root:record: nmdc:86ff61ecabbb7e9909006b2dd4e20702, ReadBased Analysis Activity for nmdc:mga0cyqf35 +INFO:root:PassingDataObject: nmdc:28b9b982d618958462406698655291d1 +INFO:root:PassingDataObject: nmdc:8947674444c896a95cb89495688bb980 +INFO:root:PassingDataObject: nmdc:286ed2b5f832c8c5ed263b42916e529a +INFO:root:PassingDataObject: nmdc:0c3717549e325835e27da439b43d12e3 +INFO:root:PassingDataObject: nmdc:092a15cf325d937662eaae27e568002d +INFO:root:PassingDataObject: nmdc:65ff89f90b660ab72d4e3b2439f54c67 +INFO:root:PassingDataObject: nmdc:078a917192efc6b1c0d8ed09ba85c1e2 +INFO:root:PassingDataObject: nmdc:847ef7c49fdede7c5ed681456808f445 +INFO:root:PassingDataObject: nmdc:2c59b6cc826d759d635f0cca92bcde9f +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:2147ba8538d1767c047fd8ce93aa71ab, ReadBased Analysis Activity for nmdc:mga07gx047 +INFO:root:PassingDataObject: nmdc:8400e006fb72bbcf16a21b04e4a22f87 +INFO:root:PassingDataObject: nmdc:bac214a7c9b20545e00d3365304bde9b +INFO:root:PassingDataObject: nmdc:f717e69b9233acafaf2c7819afe05e32 +INFO:root:PassingDataObject: nmdc:9367bec4b1e75d57134863c28fe05b10 +INFO:root:PassingDataObject: nmdc:a915d62d04a05f62a4145da0ad916699 +INFO:root:PassingDataObject: nmdc:283d88ae3e89c9559b9dd5180f84aaf6 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:2147ba8538d1767c047fd8ce93aa71ab +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:2147ba8538d1767c047fd8ce93aa71ab +ERROR:root:FailedDataObject: nmdc:73f3542e3100c9bbb596c8c2ed831d58, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2147ba8538d1767c047fd8ce93aa71ab, ReadBased Analysis Activity for nmdc:mga07gx047 +INFO:root:record: nmdc:2f19f2500e1c10efcd4372dd3044fb52, ReadBased Analysis Activity for nmdc:mga0fbpz25 +INFO:root:PassingDataObject: nmdc:a07ad01df8e04049096318815c682a7c +INFO:root:PassingDataObject: nmdc:b24ca2461fa0fd5beb2541fec53f86d7 +INFO:root:PassingDataObject: nmdc:f9ea8f77c09b835cead9b3c5abbe067a +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:2f19f2500e1c10efcd4372dd3044fb52 +ERROR:root:FailedDataObject: nmdc:76689eb4a8f5ec74e4740371ad0086b6, +ERROR:root:FailedDataObject: nmdc:a1a44603ab7f6ea246494194b60cabdc, +ERROR:root:FailedDataObject: nmdc:840302f6ec8f60100a7ea651d2a1b71b, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:2f19f2500e1c10efcd4372dd3044fb52 +ERROR:root:FailedDataObject: nmdc:aa6fb6c12dcb386f3cb81862831a37b1, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2f19f2500e1c10efcd4372dd3044fb52, ReadBased Analysis Activity for nmdc:mga0fbpz25 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452677 +INFO:root:found 3 records +INFO:root:record: nmdc:86ff61ecabbb7e9909006b2dd4e20702, Assembly Activity for nmdc:mga0cyqf35 +INFO:root:PassingDataObject: nmdc:faceb2fb048cec8a6ed1080fa73d7eca +INFO:root:PassingDataObject: nmdc:aa0a58b317556deb09ca49928ea8db72 +INFO:root:PassingDataObject: nmdc:01d515c9b3b57d1b5c93879bf60486ba +INFO:root:PassingDataObject: nmdc:559223a8091b01170ab2497620aa0fec +INFO:root:PassingDataObject: nmdc:f370f8177858e91fffaefe4316cdfe68 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:2147ba8538d1767c047fd8ce93aa71ab, Assembly Activity for nmdc:mga07gx047 +INFO:root:PassingDataObject: nmdc:3a65349a187f14a1c4ce745193a41d34 +INFO:root:PassingDataObject: nmdc:fed9dd8efcc96aa91e627d4a29dc0057 +INFO:root:PassingDataObject: nmdc:a53162311874a9741bde899323105ddc +INFO:root:PassingDataObject: nmdc:2d625dd0368eb48d8854c9264afdbd84 +INFO:root:PassingDataObject: nmdc:a726e0f57b9e3d315fadbeef684e3ef1 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:2f19f2500e1c10efcd4372dd3044fb52, Assembly Activity for nmdc:mga0fbpz25 +INFO:root:PassingDataObject: nmdc:ebdce3835ab5b2b6be9c9382bbd7a932 +INFO:root:PassingDataObject: nmdc:b8cc4354a628ec86685cb30c4adae2a4 +INFO:root:PassingDataObject: nmdc:0095fe6991457a2b90ffe5ce6c740590 +INFO:root:PassingDataObject: nmdc:60209720cac57bece344a01c6732da7f +INFO:root:PassingDataObject: nmdc:04323b30dd6f0da328725dd0ec067a47 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452677 +INFO:root:found 3 records +INFO:root:record: nmdc:86ff61ecabbb7e9909006b2dd4e20702, Annotation Activity for nmdc:mga0cyqf35 +INFO:root:PassingDataObject: nmdc:91d3013b0208f9792431bbaeee41afaa +INFO:root:PassingDataObject: nmdc:b8eed1816b1a5159fd8edb2e0c325509 +INFO:root:PassingDataObject: nmdc:f8f1573f5dd3a18b052e2b4e4921c510 +INFO:root:PassingDataObject: nmdc:b4d0c2ac3ff79819176005ec4b64457c +INFO:root:PassingDataObject: nmdc:a523c7b072ccba0f28311c61477b510a +INFO:root:PassingDataObject: nmdc:e9dd1b5fb0d650c1450162fba3b5fd6a +INFO:root:PassingDataObject: nmdc:4121d78c480a9ff6bbdaa6c4eea7c8d8 +INFO:root:PassingDataObject: nmdc:47c2f68828e1cb61456e5f00809f2b0f +INFO:root:PassingDataObject: nmdc:551095711d2975a542e9235e91d3a079 +INFO:root:PassingDataObject: nmdc:ecd9c68b8efd57cc58ae4add6f203846 +INFO:root:PassingDataObject: nmdc:96edd76647cabf75d9ce3d443f2cc5f2 +INFO:root:PassingDataObject: nmdc:78ce256c4aababd6efa2685656a681f5 +INFO:root:PassingDataObject: nmdc:6a09908a960b80be08c60753e44634e7 +INFO:root:PassingDataObject: nmdc:f5cca92980a35625e65b0e1d66edc937 +INFO:root:PassingDataObject: nmdc:f521534b5da1688a1ec4ac4b7e373eb4 +INFO:root:PassingDataObject: nmdc:27579238536bb798efb697d6907d603a +INFO:root:PassingDataObject: nmdc:6eb23073d0861f72b135bc0b051d4bdf +INFO:root:PassingDataObject: nmdc:8b9cc4e10423f3659aa41e296b8271eb +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:86ff61ecabbb7e9909006b2dd4e20702 +ERROR:root:FailedDataObject: nmdc:cbafcdaacc7ab145a62e9e5b2b7e4cc7, +ERROR:root:FailedDataObject: nmdc:f4a6a9a1c66a7b81f7c5bb6b208b4055, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:86ff61ecabbb7e9909006b2dd4e20702, Annotation Activity for nmdc:mga0cyqf35 +INFO:root:record: nmdc:2147ba8538d1767c047fd8ce93aa71ab, Annotation Activity for nmdc:mga07gx047 +INFO:root:PassingDataObject: nmdc:b94ee59e7b3c5100edc689e14416bb8a +INFO:root:PassingDataObject: nmdc:95b3582726e0927422e31c2854462e8c +INFO:root:PassingDataObject: nmdc:a8591aeeccc892172be1a8ce4b67c4c8 +INFO:root:PassingDataObject: nmdc:5a117cdda2505f38a555906bad3fc73c +INFO:root:PassingDataObject: nmdc:adba309fc0e120a92dee648e874a8b12 +INFO:root:PassingDataObject: nmdc:eb09b70ef47749ac6781d883105a80ce +INFO:root:PassingDataObject: nmdc:efba4895a8172fdd20f8dac9dd3e9992 +INFO:root:PassingDataObject: nmdc:95222dd2e8de36b5c28b31dac72ce030 +INFO:root:PassingDataObject: nmdc:a2bdc3e41b196fcaf2ccfa55c62fcc2e +INFO:root:PassingDataObject: nmdc:7358a94e84485d20c73db6b529424327 +INFO:root:PassingDataObject: nmdc:035ff43679ed02f937961b53765e09b5 +INFO:root:PassingDataObject: nmdc:13e32d85d30745121acec9b2c7255ece +INFO:root:PassingDataObject: nmdc:271648d33b800406c6cc5f7b40582307 +INFO:root:PassingDataObject: nmdc:a48692e95c7a7357a8518321fa146689 +INFO:root:PassingDataObject: nmdc:a34f1edb1911f303ce750f597399bebb +INFO:root:PassingDataObject: nmdc:1d1569d78ccb68f56f39fe42e6aa1d9f +INFO:root:PassingDataObject: nmdc:3ede3c5c71518de5fefd943e1a43a429 +INFO:root:PassingDataObject: nmdc:f9a45cf8faf20912a7b4ad59516f27bc +INFO:root:PassingDataObject: nmdc:dac318fd934741592718fc1164fda031 +INFO:root:PassingDataObject: nmdc:eb0513f39ac4b3ebf0af6af681356ba5 +INFO:root:PassingDataObject: nmdc:129cfdd5e01b34895df309141bfa103e +INFO:root:PassingDataObject: nmdc:5cd834212a21bfe6d0b9a1603343750e +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:2f19f2500e1c10efcd4372dd3044fb52, Annotation Activity for nmdc:mga0fbpz25 +INFO:root:PassingDataObject: nmdc:dc3c20f48a6a4b3ae168a47cacfa96e3 +INFO:root:PassingDataObject: nmdc:aebdbbde7980ea0e89b4286efbf75dca +INFO:root:PassingDataObject: nmdc:e81427546dd6f6a3862e4d35559e174b +INFO:root:PassingDataObject: nmdc:fd719f7c47082abf485ee703e64beefd +INFO:root:PassingDataObject: nmdc:5915db9f98e9aae5316f79c7ad652036 +INFO:root:PassingDataObject: nmdc:085522c9c5e9f0c393bb3a08a74c01db +INFO:root:PassingDataObject: nmdc:1414d53dbbcf1d8d2e27e2ccdd1f932c +INFO:root:PassingDataObject: nmdc:86b7d85c6d7ef395a4aeb137d221aac0 +INFO:root:PassingDataObject: nmdc:196f26e82cb02c4f70645a5cfe5a0ac9 +INFO:root:PassingDataObject: nmdc:9558160e9cd7748b0a587c6bc3edb89a +INFO:root:PassingDataObject: nmdc:08ff396b7d1372c038ef855141a7bd06 +INFO:root:PassingDataObject: nmdc:31778edd254e58f7128c47cbb07dc1cc +INFO:root:PassingDataObject: nmdc:65625fdb7725266976bf1d701cc30767 +INFO:root:PassingDataObject: nmdc:567932b3fa6db6ed23c305f48e2ebd3f +INFO:root:PassingDataObject: nmdc:1dc62aeaed947b8caf12cada589bd7df +INFO:root:PassingDataObject: nmdc:bd2f2185e2c428fdbc2532dae72120af +INFO:root:PassingDataObject: nmdc:1b0d5ad82bffc2bacaf032f42956160d +INFO:root:PassingDataObject: nmdc:627525285a668e8f271274326f2c7bfc +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:2f19f2500e1c10efcd4372dd3044fb52 +ERROR:root:FailedDataObject: nmdc:12e09c5cf3e2f8597bc5302920ba518a, +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2f19f2500e1c10efcd4372dd3044fb52, Annotation Activity for nmdc:mga0fbpz25 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452677 +INFO:root:found 3 records +INFO:root:record: nmdc:86ff61ecabbb7e9909006b2dd4e20702, MAGs Analysis Activity for nmdc:mga0cyqf35 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:86ff61ecabbb7e9909006b2dd4e20702 +ERROR:root:FailedDataObject: nmdc:bb7b429ba12b12f4c97f607686ea0363, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:86ff61ecabbb7e9909006b2dd4e20702, MAGs Analysis Activity for nmdc:mga0cyqf35 +INFO:root:record: nmdc:2147ba8538d1767c047fd8ce93aa71ab, MAGs Analysis Activity for nmdc:mga07gx047 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2147ba8538d1767c047fd8ce93aa71ab +ERROR:root:FailedDataObject: nmdc:05dda23577a27e8db36857aa2cd20c6e, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2147ba8538d1767c047fd8ce93aa71ab, MAGs Analysis Activity for nmdc:mga07gx047 +INFO:root:record: nmdc:2f19f2500e1c10efcd4372dd3044fb52, MAGs Analysis Activity for nmdc:mga0fbpz25 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2f19f2500e1c10efcd4372dd3044fb52 +ERROR:root:FailedDataObject: nmdc:64bbe91ec693b1e8bf8b00fae7e94b65, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2f19f2500e1c10efcd4372dd3044fb52, MAGs Analysis Activity for nmdc:mga0fbpz25 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452677 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-x55c0448 +INFO:root:legacy_id: gold:Gp0452551 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-x55c0448 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fdead54cfa9e0a4028cf5b083ce0ac96 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8a9309513669d3c206b723520e884d35 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452551 +INFO:root:found 2 records +INFO:root:record: nmdc:0921ec06c8cee6d6960b1dd3b67d7499, Read QC Activity for nmdc:mga01vqm09 +INFO:root:PassingDataObject: nmdc:29f317309051714b73745874499cb356 +INFO:root:PassingDataObject: nmdc:d25dbb1787a5da2ed8009e2d1a465074 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:bcd06db0a5a4b6dc636e1b2785304db9, Read QC Activity for nmdc:mga0541q40 +INFO:root:PassingDataObject: nmdc:cb5aba19439fb84c8a986e5034ee2076 +INFO:root:PassingDataObject: nmdc:5d58f1225c461a7375a39c51d5473818 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452551 +INFO:root:found 2 records +INFO:root:record: nmdc:0921ec06c8cee6d6960b1dd3b67d7499, ReadBased Analysis Activity for nmdc:mga01vqm09 +INFO:root:PassingDataObject: nmdc:46cdbafd47c3dcf75ee51e0a7d6e3202 +INFO:root:PassingDataObject: nmdc:a23a4f43550d3f8ef2f44002f26e5d12 +INFO:root:PassingDataObject: nmdc:87d46408dc9b5fafc4065f905f1ce3f4 +INFO:root:PassingDataObject: nmdc:f814c23297d4a0161775c6919aea15aa +INFO:root:PassingDataObject: nmdc:b4113a6cadf78aef37a31d65ff8a3e59 +INFO:root:PassingDataObject: nmdc:c1134d70916578b1742117cafa6a1117 +INFO:root:PassingDataObject: nmdc:c73e6842d940d6fae85c1301cf1c2591 +INFO:root:PassingDataObject: nmdc:001ee58788a573c4615b858a465ffc9e +INFO:root:PassingDataObject: nmdc:f7c5c4410217df82d1a328ff731cf6c6 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:bcd06db0a5a4b6dc636e1b2785304db9, ReadBased Analysis Activity for nmdc:mga0541q40 +INFO:root:PassingDataObject: nmdc:557f81503a3da8a9bb8b6aa2bb5c02e9 +INFO:root:PassingDataObject: nmdc:9071f38230f319801f497c8cdc5cca1d +INFO:root:PassingDataObject: nmdc:cc0c8155b006cbd4c494a6dc8d4e1511 +INFO:root:PassingDataObject: nmdc:6be0bb3571f3f01869ca24adcec9068d +INFO:root:PassingDataObject: nmdc:254b82ac24f525a1a0df0f92fc0813b0 +INFO:root:PassingDataObject: nmdc:c3df0ce0c04a029220923d1555091cdb +INFO:root:PassingDataObject: nmdc:95fd640e6025e281301ec0fd2a32edff +INFO:root:PassingDataObject: nmdc:61ce3d9bb63fe24e9a9fcf4d7154f7d9 +INFO:root:PassingDataObject: nmdc:40d561e189fe05d781b6b365edf04b65 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452551 +INFO:root:found 2 records +INFO:root:record: nmdc:0921ec06c8cee6d6960b1dd3b67d7499, Assembly Activity for nmdc:mga01vqm09 +INFO:root:PassingDataObject: nmdc:e4b63764f147dc2834e3d4399f1a761e +INFO:root:PassingDataObject: nmdc:16a6ef078d2def794945ba75aa89e7e6 +INFO:root:PassingDataObject: nmdc:f512f4cb06f483a8355b0fd9fff03759 +INFO:root:PassingDataObject: nmdc:b66d533844513678ed71c89bfe53a4cf +INFO:root:PassingDataObject: nmdc:c6756ce52402752be5b84f0fc0fa3e11 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:bcd06db0a5a4b6dc636e1b2785304db9, Assembly Activity for nmdc:mga0541q40 +INFO:root:PassingDataObject: nmdc:896bd0abdfb4da2232dd1690017052f2 +INFO:root:PassingDataObject: nmdc:54ebd75e62f9a4b62ecfc0ede4c2e3b3 +INFO:root:PassingDataObject: nmdc:d7f051cdd338620088dabc9d8e3df730 +INFO:root:PassingDataObject: nmdc:43477c6185d4d8e46d7fe19a851f4136 +INFO:root:PassingDataObject: nmdc:7af691cb976340daeb67a1f2c56eba57 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452551 +INFO:root:found 2 records +INFO:root:record: nmdc:0921ec06c8cee6d6960b1dd3b67d7499, Annotation Activity for nmdc:mga01vqm09 +INFO:root:PassingDataObject: nmdc:edc65c76394fa7c93b3586611e9f63be +INFO:root:PassingDataObject: nmdc:288fac5963e10552c7b25e7b265b8c5a +INFO:root:PassingDataObject: nmdc:65e3fdce14a3313e97cbd99b5e22a1b6 +INFO:root:PassingDataObject: nmdc:442b67ffaee7071cfd5a7259520ae24f +INFO:root:PassingDataObject: nmdc:702d85d453fa210729ca1cb82f3951b1 +INFO:root:PassingDataObject: nmdc:17feecebee1675b817840d2fc887b0b0 +INFO:root:PassingDataObject: nmdc:ec9ecfbe45cb9da245d8ee7d6cedb64b +INFO:root:PassingDataObject: nmdc:c6880f8d4743f29e0503141fd855f68f +INFO:root:PassingDataObject: nmdc:952d019d7eeedaa33257f1040bee2436 +INFO:root:PassingDataObject: nmdc:c6e4a5bbb6f0a0540b6d8b3b313dc0e7 +INFO:root:PassingDataObject: nmdc:48660bfbb920510679d4dc967b19585a +INFO:root:PassingDataObject: nmdc:4e3d7af18ce661d2f3a6071e24bc8663 +INFO:root:PassingDataObject: nmdc:9e28c27299806e177b2a65ab323efd54 +INFO:root:PassingDataObject: nmdc:40137eeb1de19445029f190f3c37f0f6 +INFO:root:PassingDataObject: nmdc:bca702a052132ae2191c32d452b199a5 +INFO:root:PassingDataObject: nmdc:50514f15bc696cf14638238418dd9c2e +INFO:root:PassingDataObject: nmdc:12ec5637b4c5edc8dbb87ed47df5c074 +INFO:root:PassingDataObject: nmdc:ed39fb19a9fc91d029f348733e701e19 +INFO:root:PassingDataObject: nmdc:4591efe3f4ac0dc35ba3a393ff1eca5a +INFO:root:PassingDataObject: nmdc:1554bd79a367ab21589e8234807bda20 +INFO:root:PassingDataObject: nmdc:fd00d5d7bcc45deb83fc314a4ef3979a +INFO:root:PassingDataObject: nmdc:74ab427b72e302d68ac71cfb0ef438e0 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:bcd06db0a5a4b6dc636e1b2785304db9, Annotation Activity for nmdc:mga0541q40 +INFO:root:PassingDataObject: nmdc:81242ebacf3b2c5ef25d0435c3c9e9b8 +INFO:root:PassingDataObject: nmdc:7b37516b69ffaf99a03428109815f9df +INFO:root:PassingDataObject: nmdc:516db8be11b0c403c048002485cc4dde +INFO:root:PassingDataObject: nmdc:15b8cdffb29844397c082ef97114c0b1 +INFO:root:PassingDataObject: nmdc:7556dfeaf7830df00470415d44a5fb7c +INFO:root:PassingDataObject: nmdc:81b3e4cf9f87f03472792b44382f0b89 +INFO:root:PassingDataObject: nmdc:755a152e8ed5000a515c1830128adf9f +INFO:root:PassingDataObject: nmdc:8183436547a6afb63dc4797eb568f905 +INFO:root:PassingDataObject: nmdc:5d8ddaf858e8551bfa987de1a27856f5 +INFO:root:PassingDataObject: nmdc:b314f47b8da7c92e9f74bf45df27ffaa +INFO:root:PassingDataObject: nmdc:4dd86c90ffd439372bd726ba8e562dee +INFO:root:PassingDataObject: nmdc:7c246426a3c886aa79e07365fe0d8481 +INFO:root:PassingDataObject: nmdc:fb154309a1790bfe703275315fa8bba3 +INFO:root:PassingDataObject: nmdc:2ed0661c8ae138cb40753e765a66cef7 +INFO:root:PassingDataObject: nmdc:5c554f12caa22d678fa2a92a34528596 +INFO:root:PassingDataObject: nmdc:2d34246650557656871d50595882c9a8 +INFO:root:PassingDataObject: nmdc:fe0756c27bd5357f949be435f3248907 +INFO:root:PassingDataObject: nmdc:a2a928a6e25d7bee6f2582237900fec6 +INFO:root:PassingDataObject: nmdc:e4b6c2115e2d049a2f78759c4597c847 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:bcd06db0a5a4b6dc636e1b2785304db9 +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bcd06db0a5a4b6dc636e1b2785304db9, Annotation Activity for nmdc:mga0541q40 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452551 +INFO:root:found 2 records +INFO:root:record: nmdc:0921ec06c8cee6d6960b1dd3b67d7499, MAGs Analysis Activity for nmdc:mga01vqm09 +INFO:root:PassingDataObject: nmdc:0306d9363a3d5b78ceacbbe07c0ae700 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0921ec06c8cee6d6960b1dd3b67d7499 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0921ec06c8cee6d6960b1dd3b67d7499, MAGs Analysis Activity for nmdc:mga01vqm09 +INFO:root:record: nmdc:bcd06db0a5a4b6dc636e1b2785304db9, MAGs Analysis Activity for nmdc:mga0541q40 +INFO:root:PassingDataObject: nmdc:e63aa938ab929d36adfd26b50db125e9 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:bcd06db0a5a4b6dc636e1b2785304db9 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bcd06db0a5a4b6dc636e1b2785304db9, MAGs Analysis Activity for nmdc:mga0541q40 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452551 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-7rcsbx13 +INFO:root:legacy_id: gold:Gp0452659 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-7rcsbx13 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:536d0340ce16bb199937e489c56a498b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c4fdbadad4ffbf6d2caead75a9f1e2e0 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:544ed1f9800ce2dd9644a6fb7ec2f667 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452659 +INFO:root:found 3 records +INFO:root:record: nmdc:b59613e9697f864c29df164c185b17dd, Read QC Activity for nmdc:mga0j4ht70 +INFO:root:PassingDataObject: nmdc:56769aa4a2d87443c30f9ca406bd0c27 +INFO:root:PassingDataObject: nmdc:147a4b59551ebebc254ff026b6af549f +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:5d5d69db03bce43dbfee5a0d4c92389e, Read QC Activity for nmdc:mga0t33z53 +INFO:root:PassingDataObject: nmdc:07f8961698b783e4b4086d07a9fb5243 +INFO:root:PassingDataObject: nmdc:21488225463baa53d67e58b7c4b612b1 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:fe37f8606ab0f659f1c53dfa9520c7eb, Read QC Activity for nmdc:mga0sthf21 +INFO:root:PassingDataObject: nmdc:0fa329f2bce05bc1fcf10f6f3c19d7f8 +INFO:root:PassingDataObject: nmdc:60d48fa174ed62f20dcdc4ce0761ee40 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452659 +INFO:root:found 3 records +INFO:root:record: nmdc:b59613e9697f864c29df164c185b17dd, ReadBased Analysis Activity for nmdc:mga0j4ht70 +INFO:root:PassingDataObject: nmdc:328f15739d73dafbf9d9cf5a6293f615 +INFO:root:PassingDataObject: nmdc:e22b46d44f1bc241476d05eda991d588 +INFO:root:PassingDataObject: nmdc:2683560a56c17e3b61e00afefe5a9052 +INFO:root:PassingDataObject: nmdc:0cb9b47f4ba49587a9150972202d4e70 +INFO:root:PassingDataObject: nmdc:af067559e4ddfcb9dd73a47afa2d586a +INFO:root:PassingDataObject: nmdc:9472e65e7f1746a84e2d6b185af12b66 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:b59613e9697f864c29df164c185b17dd +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:b59613e9697f864c29df164c185b17dd +ERROR:root:FailedDataObject: nmdc:85790d80bcb4a1797018f4aacb5be3c9, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b59613e9697f864c29df164c185b17dd, ReadBased Analysis Activity for nmdc:mga0j4ht70 +INFO:root:record: nmdc:fe37f8606ab0f659f1c53dfa9520c7eb, ReadBased Analysis Activity for nmdc:mga0sthf21 +INFO:root:PassingDataObject: nmdc:d4b411b8dfde92e8280498e06aa6382f +INFO:root:PassingDataObject: nmdc:e0790cc6cd63199016dd81c097bc2027 +INFO:root:PassingDataObject: nmdc:daafeaebc764449e275e4f3af267539a +INFO:root:PassingDataObject: nmdc:a292c47b75e21762679cdb5736457cbc +INFO:root:PassingDataObject: nmdc:97fd1159b4336cab27c61224047a62f1 +INFO:root:PassingDataObject: nmdc:a93d6e67380ada7770e01449f4874e5a +INFO:root:PassingDataObject: nmdc:6ede01b331f69c7b5a3862501f1568bf +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:fe37f8606ab0f659f1c53dfa9520c7eb +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:fe37f8606ab0f659f1c53dfa9520c7eb +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fe37f8606ab0f659f1c53dfa9520c7eb, ReadBased Analysis Activity for nmdc:mga0sthf21 +INFO:root:record: nmdc:5d5d69db03bce43dbfee5a0d4c92389e, ReadBased Analysis Activity for nmdc:mga0t33z53 +INFO:root:PassingDataObject: nmdc:64a3f67e676aa902ebb3b8a90e674b57 +INFO:root:PassingDataObject: nmdc:b3d1c29fd96b731947fc13cfba9807d7 +INFO:root:PassingDataObject: nmdc:421dc549553eccab83089e6417387d3d +INFO:root:PassingDataObject: nmdc:6fa40bf5f953c87289535fcf992a216c +INFO:root:PassingDataObject: nmdc:7f1a3cd41ee560932207eb7cbd5b6b4d +INFO:root:PassingDataObject: nmdc:055908b4c6f6325129e13b8c82056e1a +INFO:root:PassingDataObject: nmdc:aef5e833c1e2162b79a6a6bd0e7e8919 +INFO:root:PassingDataObject: nmdc:f9f67fcb12c9dc2f90b3ac8c5040ac61 +INFO:root:PassingDataObject: nmdc:21fc35f34ed56d42e7bd7b6f8c20f4c0 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452659 +INFO:root:found 3 records +INFO:root:record: nmdc:5d5d69db03bce43dbfee5a0d4c92389e, Assembly Activity for nmdc:mga0t33z53 +INFO:root:PassingDataObject: nmdc:207b9fb71175852692ded3648cf44ea7 +INFO:root:PassingDataObject: nmdc:11f5b540ef59b76bae6a0efcb4e2ec9f +INFO:root:PassingDataObject: nmdc:de23c65bbc195b1f476c8eaee9c8432f +INFO:root:PassingDataObject: nmdc:f67df20b78f0c18671327aa9ce7b604b +INFO:root:PassingDataObject: nmdc:d8621e5f4f4c067b283bb86bc9c5e1fc +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:b59613e9697f864c29df164c185b17dd, Assembly Activity for nmdc:mga0j4ht70 +INFO:root:PassingDataObject: nmdc:4fa5b82d0fa1c70f9dd20c5a68e58d0a +INFO:root:PassingDataObject: nmdc:08cbb53fae82e8decc1767ab2d6c25cb +INFO:root:PassingDataObject: nmdc:647eb914363674588f5348b3b73605df +INFO:root:PassingDataObject: nmdc:1e386eb5eb8a20d3861ff72b7717ae3a +INFO:root:PassingDataObject: nmdc:92a40aec5b20b9cb767555c59864e4f8 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:fe37f8606ab0f659f1c53dfa9520c7eb, Assembly Activity for nmdc:mga0sthf21 +INFO:root:PassingDataObject: nmdc:cbde3b84180376deca23ed77aa8d2d6c +INFO:root:PassingDataObject: nmdc:5e57737a2fcd70af30d6c4b023cd4e12 +INFO:root:PassingDataObject: nmdc:339239be42dd51d5a66ab90008918a19 +INFO:root:PassingDataObject: nmdc:a31b45b5ecfa448aab4f83b293b95d3b +INFO:root:PassingDataObject: nmdc:9bd96d849b8b7854b1528e7df62515ba +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452659 +INFO:root:found 3 records +INFO:root:record: nmdc:b59613e9697f864c29df164c185b17dd, Annotation Activity for nmdc:mga0j4ht70 +INFO:root:PassingDataObject: nmdc:71d7bb8d5d67d455ef84370401d86fdb +INFO:root:PassingDataObject: nmdc:e9332c3444342c53a6ba4e09ef00c613 +INFO:root:PassingDataObject: nmdc:58235a170176bef9f401818e80b23928 +INFO:root:PassingDataObject: nmdc:3fd2f98ee81ff2ce238ae29596ba84cc +INFO:root:PassingDataObject: nmdc:be1a72bef31524937071a677a1cad6a2 +INFO:root:PassingDataObject: nmdc:2de8b0419a8171532798094bc1a00f73 +INFO:root:PassingDataObject: nmdc:251d395c10fb8d0b442156a732714697 +INFO:root:PassingDataObject: nmdc:6b6caf3f3cfac37e1e1c7acfbe4bb136 +INFO:root:PassingDataObject: nmdc:df699d1a20f9218dfe166b7c55148532 +INFO:root:PassingDataObject: nmdc:095a2000142bda4d3e34cd1e1d9a3fa2 +INFO:root:PassingDataObject: nmdc:82a79ed56e5d719cc15e0cb3d4dcc025 +INFO:root:PassingDataObject: nmdc:9266f8b28ca35340a4cc49042970251f +INFO:root:PassingDataObject: nmdc:8664ba3bf91cf82e7d86f32af41119e7 +INFO:root:PassingDataObject: nmdc:f171fcd5d1a993757c33f64fa2a7081d +INFO:root:PassingDataObject: nmdc:1cdc58f18ed6c6338d767426c13b3389 +INFO:root:PassingDataObject: nmdc:ea3712a748c02c5507780f6a89b399c7 +INFO:root:PassingDataObject: nmdc:bd76952fa79a82f5ccb62763306ba05b +INFO:root:PassingDataObject: nmdc:2edf38d774a4654547b6413370c2d01c +INFO:root:PassingDataObject: nmdc:dc2c006b16324ae132db0cf2ac3bf11d +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:b59613e9697f864c29df164c185b17dd +ERROR:root:FailedDataObject: nmdc:587469b1795ed064d9a5942db3ebed15, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b59613e9697f864c29df164c185b17dd, Annotation Activity for nmdc:mga0j4ht70 +INFO:root:record: nmdc:fe37f8606ab0f659f1c53dfa9520c7eb, Annotation Activity for nmdc:mga0sthf21 +INFO:root:PassingDataObject: nmdc:9ecde42fa39c8aa60f580bbaebdb85cb +INFO:root:PassingDataObject: nmdc:f572f6d0a9c940a6d4934a57713d336b +INFO:root:PassingDataObject: nmdc:2f4fc39d64c3ce16cac4e0a20f87accb +INFO:root:PassingDataObject: nmdc:ff93dde2919bbee0007b9b44cd60a8fb +INFO:root:PassingDataObject: nmdc:d31906444be33281db567543e4b5ba04 +INFO:root:PassingDataObject: nmdc:bb911545f665113b401b698a967e068b +INFO:root:PassingDataObject: nmdc:66f4c14204d09829604b1f360d618637 +INFO:root:PassingDataObject: nmdc:3727df6db81fb773496f8303d0e4f076 +INFO:root:PassingDataObject: nmdc:df054032d493061eb91466f519252bf3 +INFO:root:PassingDataObject: nmdc:f0631c7ff7d8d2c749bd28152a526d2c +INFO:root:PassingDataObject: nmdc:3c97db99ac4b3c5f35dedc124a85d544 +INFO:root:PassingDataObject: nmdc:aac7caa94a830c45d58598093e222ab2 +INFO:root:PassingDataObject: nmdc:022b95f9440c84ea464502ac1973140c +INFO:root:PassingDataObject: nmdc:15f36c61d0288f3664871bed702d175c +INFO:root:PassingDataObject: nmdc:f1dc2bb797f7eae033920ba73ae69203 +INFO:root:PassingDataObject: nmdc:217d3da196a37fc290082ea76c101467 +INFO:root:PassingDataObject: nmdc:1dd268a3a51c0d8cd00dfd66f27056c8 +INFO:root:PassingDataObject: nmdc:c1ed40a062f8ebd45209276ae8299f35 +INFO:root:PassingDataObject: nmdc:112391075c6c5f9a948b1b713a5effc2 +INFO:root:PassingDataObject: nmdc:1071b1d8d155f6951aded66a3a531002 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:fe37f8606ab0f659f1c53dfa9520c7eb +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fe37f8606ab0f659f1c53dfa9520c7eb, Annotation Activity for nmdc:mga0sthf21 +INFO:root:record: nmdc:5d5d69db03bce43dbfee5a0d4c92389e, Annotation Activity for nmdc:mga0t33z53 +INFO:root:PassingDataObject: nmdc:10966cc2123480cfa7b948fc58817dc5 +INFO:root:PassingDataObject: nmdc:c449c24d930b70622f8c7d16ad0efd8c +INFO:root:PassingDataObject: nmdc:163797256352fe8b2eb0019698ad2d40 +INFO:root:PassingDataObject: nmdc:123b2cbea469818f67069a2ae4800265 +INFO:root:PassingDataObject: nmdc:14affd469e0de1def7e2f2de2b5e6afc +INFO:root:PassingDataObject: nmdc:872cfa873e596ad7273af2b4515927e6 +INFO:root:PassingDataObject: nmdc:f3b74e8a5811d7fa8edb09688d77340c +INFO:root:PassingDataObject: nmdc:1402be102e88bb97111235f6cb2bd0d4 +INFO:root:PassingDataObject: nmdc:b5b00ea3d9f6fb534ca06af5e5fb8c8e +INFO:root:PassingDataObject: nmdc:40c130c9e21f05527ebea7c496a895f9 +INFO:root:PassingDataObject: nmdc:8b66d90a52c7bea82aacc3a3577b4c2a +INFO:root:PassingDataObject: nmdc:d96a38693d17de5905a1fd4252e75f43 +INFO:root:PassingDataObject: nmdc:992b436d86d91dd91c234bd58e7ce287 +INFO:root:PassingDataObject: nmdc:e1d174a12cdbda4f8bc8749527f8686a +INFO:root:PassingDataObject: nmdc:8f59f34289f8bf931137de3a7f03491e +INFO:root:PassingDataObject: nmdc:f8c9207f8d37a47dbf3ceb288db68e9e +INFO:root:PassingDataObject: nmdc:c0f8c6031dafa3530128bc14768d5b03 +INFO:root:PassingDataObject: nmdc:3c50a0d71555f572f5ecaf04e97da99e +INFO:root:PassingDataObject: nmdc:550b605d07c59f1950459e5358201cac +INFO:root:PassingDataObject: nmdc:d6095ea01bcea964f22f3b0845d56bd4 +INFO:root:PassingDataObject: nmdc:b49cb5401c0999ec5c40f9f96b91c0b1 +INFO:root:PassingDataObject: nmdc:3b8968fb209691ae23a8ea853da94317 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452659 +INFO:root:found 3 records +INFO:root:record: nmdc:b59613e9697f864c29df164c185b17dd, MAGs Analysis Activity for nmdc:mga0j4ht70 +INFO:root:PassingDataObject: nmdc:622d5d35d4c41c631bf2107328043609 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:b59613e9697f864c29df164c185b17dd +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b59613e9697f864c29df164c185b17dd, MAGs Analysis Activity for nmdc:mga0j4ht70 +INFO:root:record: nmdc:5d5d69db03bce43dbfee5a0d4c92389e, MAGs Analysis Activity for nmdc:mga0t33z53 +INFO:root:PassingDataObject: nmdc:83631a68a169091f99d1fa4a6382bd74 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5d5d69db03bce43dbfee5a0d4c92389e +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5d5d69db03bce43dbfee5a0d4c92389e, MAGs Analysis Activity for nmdc:mga0t33z53 +INFO:root:record: nmdc:fe37f8606ab0f659f1c53dfa9520c7eb, MAGs Analysis Activity for nmdc:mga0sthf21 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fe37f8606ab0f659f1c53dfa9520c7eb +ERROR:root:FailedDataObject: nmdc:25c16c493facbb6fd995f654711ae993, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fe37f8606ab0f659f1c53dfa9520c7eb, MAGs Analysis Activity for nmdc:mga0sthf21 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452659 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-2y4qrr86 +INFO:root:legacy_id: gold:Gp0452550 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-2y4qrr86 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:abd4e5c6d92c516e6f03388344dfdc3e +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a3fc0a844c61b2ac69cfa447b7a96a56 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:28aec91bd850fa546e3fc73f35d85c09 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452550 +INFO:root:found 3 records +INFO:root:record: nmdc:8554e95badc543f4d338c7368a3023da, Read QC Activity for nmdc:mga0papr04 +INFO:root:PassingDataObject: nmdc:46bbdfbb6a4871b59217eb2a6c0d9303 +INFO:root:PassingDataObject: nmdc:8395b927d5709ef41d1d7102616ec0a5 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:ba2ec926a19b7e68a3f581bf48cc48df, Read QC Activity for nmdc:mga0pt3a54 +INFO:root:PassingDataObject: nmdc:56bdf4e9f0327ac72c45c71aa776bf9b +INFO:root:PassingDataObject: nmdc:f222cfbf22df7b35aea146164ba6c742 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:bcfc6f279b5842bcc44452e40c567b51, Read QC Activity for nmdc:mga07jpm44 +INFO:root:PassingDataObject: nmdc:f260d95a968629d937fbb0e11efa8b4d +INFO:root:PassingDataObject: nmdc:02eb9716b3a07f7c695749ebec90c8de +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452550 +INFO:root:found 3 records +INFO:root:record: nmdc:8554e95badc543f4d338c7368a3023da, ReadBased Analysis Activity for nmdc:mga0papr04 +INFO:root:PassingDataObject: nmdc:8c997d12355ea1379a4e59fddb4c1e06 +INFO:root:PassingDataObject: nmdc:3c051b54f18bc191bfd6e07da011ae0a +INFO:root:PassingDataObject: nmdc:a7f9a8531169d1f4e3a1df0b9d427eae +INFO:root:PassingDataObject: nmdc:b49d5be018885abd8b7191623228d08f +INFO:root:PassingDataObject: nmdc:e4b5bd9a1311ed5b557cd7298d630a77 +INFO:root:PassingDataObject: nmdc:41d5925ea8fdde4591a9ad3ed84fa975 +INFO:root:PassingDataObject: nmdc:25d769a457448eaff4f87324b36b9150 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:8554e95badc543f4d338c7368a3023da +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:8554e95badc543f4d338c7368a3023da +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:8554e95badc543f4d338c7368a3023da, ReadBased Analysis Activity for nmdc:mga0papr04 +INFO:root:record: nmdc:ba2ec926a19b7e68a3f581bf48cc48df, ReadBased Analysis Activity for nmdc:mga0pt3a54 +INFO:root:PassingDataObject: nmdc:f096520b5791f8804af6ff0d74ce6cef +INFO:root:PassingDataObject: nmdc:4799e37fa64b516bf503f89f34119ea9 +INFO:root:PassingDataObject: nmdc:22c3cd274864a86b2b7e56b58947948e +INFO:root:PassingDataObject: nmdc:c66f6b32cdba57d62007938e50903fde +INFO:root:PassingDataObject: nmdc:7cceaf0929bd150900de9cca247d473d +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:ba2ec926a19b7e68a3f581bf48cc48df +ERROR:root:FailedDataObject: nmdc:8f7487688c3847f3dd303c5f17f684f0, +ERROR:root:FailedDataObject: nmdc:fa796baa17d0f1d1298657bf0d31e0bb, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:ba2ec926a19b7e68a3f581bf48cc48df +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ba2ec926a19b7e68a3f581bf48cc48df, ReadBased Analysis Activity for nmdc:mga0pt3a54 +INFO:root:record: nmdc:bcfc6f279b5842bcc44452e40c567b51, ReadBased Analysis Activity for nmdc:mga07jpm44 +INFO:root:PassingDataObject: nmdc:f9a99a35ebbe8c67ef52d7c7a10840ba +INFO:root:PassingDataObject: nmdc:0e23b169328e58689ce6edc973e1cb06 +INFO:root:PassingDataObject: nmdc:0f0cc3b9d2dff888bbd203227989b39e +INFO:root:PassingDataObject: nmdc:43e19b55882d2562c8ee2f49ef1b880c +INFO:root:PassingDataObject: nmdc:151577633ee19d42465fb07e3aee117c +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:bcfc6f279b5842bcc44452e40c567b51 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:bcfc6f279b5842bcc44452e40c567b51 +ERROR:root:FailedDataObject: nmdc:e0e420b35a50eedcc71685ef0de557f9, +ERROR:root:FailedDataObject: nmdc:473d3b80335ed75110c16f175ccb0f7d, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bcfc6f279b5842bcc44452e40c567b51, ReadBased Analysis Activity for nmdc:mga07jpm44 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452550 +INFO:root:found 3 records +INFO:root:record: nmdc:8554e95badc543f4d338c7368a3023da, Assembly Activity for nmdc:mga0papr04 +INFO:root:PassingDataObject: nmdc:6c5eb542f29aaa28c190acaa807bca88 +INFO:root:PassingDataObject: nmdc:ec8e17ac8e83488ef7408d28c5c60bf6 +INFO:root:PassingDataObject: nmdc:cda611e7906dac74abce6b2a5550df4c +INFO:root:PassingDataObject: nmdc:7325207fa107138e830ccc391cc62c1e +INFO:root:PassingDataObject: nmdc:a42563e6c9ddf9c1e8e7e0092c7ca0a6 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:ba2ec926a19b7e68a3f581bf48cc48df, Assembly Activity for nmdc:mga0pt3a54 +INFO:root:PassingDataObject: nmdc:9a4837f6e51c325ca1b7caa356c78df8 +INFO:root:PassingDataObject: nmdc:f128cf464672bc816cdc239f87202797 +INFO:root:PassingDataObject: nmdc:16ee3b68ef963c4cd03488428a0568d3 +INFO:root:PassingDataObject: nmdc:3e864e8223a6b1b447a82066edca0d11 +INFO:root:PassingDataObject: nmdc:ead2ebe47cc9244bd2a880cec173a557 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:bcfc6f279b5842bcc44452e40c567b51, Assembly Activity for nmdc:mga07jpm44 +INFO:root:PassingDataObject: nmdc:3e45072bb5e4eb43cef514049907dcc3 +INFO:root:PassingDataObject: nmdc:60ec450414763b0848d6332c220c3a38 +INFO:root:PassingDataObject: nmdc:c62aebe83398e5838b2738165207bfbe +INFO:root:PassingDataObject: nmdc:7a4dbe1b18804fd124819c3599e33c34 +INFO:root:PassingDataObject: nmdc:48df3073c010a94b649da2a9b725e014 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452550 +INFO:root:found 3 records +INFO:root:record: nmdc:ba2ec926a19b7e68a3f581bf48cc48df, Annotation Activity for nmdc:mga0pt3a54 +INFO:root:PassingDataObject: nmdc:214b6eb2ecede86b57bb222ae7abaf9a +INFO:root:PassingDataObject: nmdc:15511dca38cab575b7bef7a49f75825c +INFO:root:PassingDataObject: nmdc:2c876e43beae427738b3957a6fd2f4f9 +INFO:root:PassingDataObject: nmdc:ea7947d6b2a2fd8910643c8d9618eca5 +INFO:root:PassingDataObject: nmdc:1669544518239c8ab94c7dbc94ce4dbd +INFO:root:PassingDataObject: nmdc:7d34f38871d27f5e556d105d39457cfe +INFO:root:PassingDataObject: nmdc:f0c85be68b5d41daa2c1bdefa20d8255 +INFO:root:PassingDataObject: nmdc:c739db0b5494fde42fca7f832c2ae31b +INFO:root:PassingDataObject: nmdc:d45573b1a8104b11f4c7428154e087fa +INFO:root:PassingDataObject: nmdc:0904f65283bb9336ee839c6f4ebfaf24 +INFO:root:PassingDataObject: nmdc:b4f309fd8cf1bb24a0e120ab60bdc844 +INFO:root:PassingDataObject: nmdc:00572af18f5f82cfe3494c2739186bab +INFO:root:PassingDataObject: nmdc:0e0fd7703771e45da610dc28d725a0e1 +INFO:root:PassingDataObject: nmdc:8ff74632cc460335ab9855a0a8086909 +INFO:root:PassingDataObject: nmdc:e5fabdde5e7b19302477529b6132c5ae +INFO:root:PassingDataObject: nmdc:8cf4bb63a5e5def010f4c015d110eaef +INFO:root:PassingDataObject: nmdc:36c15a54d194cff4a80a939e3f55eaa6 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:ba2ec926a19b7e68a3f581bf48cc48df +ERROR:root:FailedDataObject: nmdc:8b6c16e3ad169ad43e9756ecb75bf1fa, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ba2ec926a19b7e68a3f581bf48cc48df, Annotation Activity for nmdc:mga0pt3a54 +INFO:root:record: nmdc:8554e95badc543f4d338c7368a3023da, Annotation Activity for nmdc:mga0papr04 +INFO:root:PassingDataObject: nmdc:7ed6ecc265b86216a080f78e869b6d1c +INFO:root:PassingDataObject: nmdc:158f435b30e896235fcc1c948b4e4cb5 +INFO:root:PassingDataObject: nmdc:a59be2834ffe797eee488d0f7dc0ac7e +INFO:root:PassingDataObject: nmdc:c68147f3a4a86905cb8cdaff5e5578bf +INFO:root:PassingDataObject: nmdc:6ab03333f08f14bb1da38137f6d72aa1 +INFO:root:PassingDataObject: nmdc:f238b30b703b48bced28b7691fba2aff +INFO:root:PassingDataObject: nmdc:bf67a713398b07142f84a71e607056a2 +INFO:root:PassingDataObject: nmdc:c344e8ed8269fd8a8ddd791f821d9d0e +INFO:root:PassingDataObject: nmdc:bab1103fa4bfac51b950e898e6a3e6cf +INFO:root:PassingDataObject: nmdc:dbafdd457a5cdc7481a9fe1a330cdd77 +INFO:root:PassingDataObject: nmdc:b3e265f381f8bc8153cff0869612c127 +INFO:root:PassingDataObject: nmdc:4960c69c4456b8643648d0b42f0d02ed +INFO:root:PassingDataObject: nmdc:b1c75e9ae860faf4b4b95ebe14049298 +INFO:root:PassingDataObject: nmdc:92420c01c19ba67b4f9e765d74f7d875 +INFO:root:PassingDataObject: nmdc:6ef7ef79c4384277b650eef082e5b5bb +INFO:root:PassingDataObject: nmdc:6ea477d75e62c5902036985ec75b4a1a +INFO:root:PassingDataObject: nmdc:60c36318c1a2f55a321672724065ea30 +INFO:root:PassingDataObject: nmdc:4680cd46294265b475436fb0f7aa7128 +INFO:root:PassingDataObject: nmdc:4da5dfe844d318590f763329383a1b6e +INFO:root:PassingDataObject: nmdc:b35f7e25ef4a3cedc2a908e7dbff9055 +INFO:root:PassingDataObject: nmdc:0da06bfb5474204a1a4c269034c36918 +INFO:root:PassingDataObject: nmdc:06115731761e99554d3b61ada5da7d0b +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:bcfc6f279b5842bcc44452e40c567b51, Annotation Activity for nmdc:mga07jpm44 +INFO:root:PassingDataObject: nmdc:6f2af2b17aa5f8d1d7f008157b254629 +INFO:root:PassingDataObject: nmdc:a13322064698dcd835d8cb5c2ba8c6f0 +INFO:root:PassingDataObject: nmdc:9ca087f67f766aa534a3a52892eac620 +INFO:root:PassingDataObject: nmdc:8b5f7b362d24b37efa2dfbf61f4973e8 +INFO:root:PassingDataObject: nmdc:d73388d56924865524572588856a77cc +INFO:root:PassingDataObject: nmdc:83978e8c17705eea73a460cc584189b6 +INFO:root:PassingDataObject: nmdc:f44b612e6040946ee0c747d1698f2847 +INFO:root:PassingDataObject: nmdc:0e73e538efdcc9fd882308245945c87b +INFO:root:PassingDataObject: nmdc:618b8fa7734c76bc67735118cf394868 +INFO:root:PassingDataObject: nmdc:7cb81a6a0a520b40aace369f74d2ff37 +INFO:root:PassingDataObject: nmdc:1e74490f3df1494c794bc1fc0ae4c3bc +INFO:root:PassingDataObject: nmdc:4a4635037496ab4b7c686f79ec6f99bf +INFO:root:PassingDataObject: nmdc:d749494c679d2ae1a75b7bb5c4285065 +INFO:root:PassingDataObject: nmdc:ab751648c3dc43d7928dead34bfe464b +INFO:root:PassingDataObject: nmdc:8c2ec15b03ce30a25f5f03a71cf74b87 +INFO:root:PassingDataObject: nmdc:741323c5d51b3bad301ee6b63d82e1df +INFO:root:PassingDataObject: nmdc:c88db275ec6aced1c550c0d89e37e0ed +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:bcfc6f279b5842bcc44452e40c567b51 +ERROR:root:FailedDataObject: nmdc:ee6ca5499df19b8363d7b697b25ed3d8, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bcfc6f279b5842bcc44452e40c567b51, Annotation Activity for nmdc:mga07jpm44 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452550 +INFO:root:found 3 records +INFO:root:record: nmdc:ba2ec926a19b7e68a3f581bf48cc48df, MAGs Analysis Activity for nmdc:mga0pt3a54 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:ba2ec926a19b7e68a3f581bf48cc48df +ERROR:root:FailedDataObject: nmdc:e135d7d4d5dea9a835837aac762f1c88, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ba2ec926a19b7e68a3f581bf48cc48df, MAGs Analysis Activity for nmdc:mga0pt3a54 +INFO:root:record: nmdc:8554e95badc543f4d338c7368a3023da, MAGs Analysis Activity for nmdc:mga0papr04 +INFO:root:PassingDataObject: nmdc:b110079810e023c5bc8428c938d4ee29 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:8554e95badc543f4d338c7368a3023da +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:8554e95badc543f4d338c7368a3023da, MAGs Analysis Activity for nmdc:mga0papr04 +INFO:root:record: nmdc:bcfc6f279b5842bcc44452e40c567b51, MAGs Analysis Activity for nmdc:mga07jpm44 +INFO:root:PassingDataObject: nmdc:c30bcefe2d876b49035ea571c023ad7d +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:bcfc6f279b5842bcc44452e40c567b51 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bcfc6f279b5842bcc44452e40c567b51, MAGs Analysis Activity for nmdc:mga07jpm44 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452550 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-1eckyf26 +INFO:root:legacy_id: gold:Gp0452711 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-1eckyf26 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:88f443f4f3053177895ba21d771eb3a1 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a8cf2918b9facdd2a10cc6ee28bccd16 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:1ed9d9f14cc05d228b407edd2c388e42 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452711 +INFO:root:found 3 records +INFO:root:record: nmdc:1aecdf9f1389a18c990e9215194aef00, Read QC Activity for nmdc:mga0qpgt42 +INFO:root:PassingDataObject: nmdc:2791d4221fac7e783d650a8b826934ab +INFO:root:PassingDataObject: nmdc:cc8359323c64c300b34ae01345962d6c +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb, Read QC Activity for nmdc:mga00xqw92 +INFO:root:PassingDataObject: nmdc:bd476f4d32b2bcc7acc3b882cd81797e +INFO:root:PassingDataObject: nmdc:8e35a9b835fc9fa9155871e6f28bc4f4 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:75ca4b15b80db0c71b049791219404e8, Read QC Activity for nmdc:mga09xb262 +INFO:root:PassingDataObject: nmdc:02b55b376afbadf02576a1f75f3a5e63 +INFO:root:PassingDataObject: nmdc:db4fb4a4675438d38f826e9c6b215a15 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452711 +INFO:root:found 3 records +INFO:root:record: nmdc:1aecdf9f1389a18c990e9215194aef00, ReadBased Analysis Activity for nmdc:mga0qpgt42 +INFO:root:PassingDataObject: nmdc:664c4773cb1049ca5985550d7973c8b7 +INFO:root:PassingDataObject: nmdc:0f57b5fd26dca53ad869ab0eb5746254 +INFO:root:PassingDataObject: nmdc:bdce2d76bc33e8d49f822a39ea3e5e19 +INFO:root:PassingDataObject: nmdc:a544fed15f50c4915611ca8a661375e3 +INFO:root:PassingDataObject: nmdc:fdf378474ac7f235303a3291000a08d7 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:1aecdf9f1389a18c990e9215194aef00 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:1aecdf9f1389a18c990e9215194aef00 +ERROR:root:FailedDataObject: nmdc:368fd70a359654e69575da30c62a12dc, +ERROR:root:FailedDataObject: nmdc:21cd9fed6f3d8c6e4bb3f467cbf67394, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1aecdf9f1389a18c990e9215194aef00, ReadBased Analysis Activity for nmdc:mga0qpgt42 +INFO:root:record: nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb, ReadBased Analysis Activity for nmdc:mga00xqw92 +INFO:root:PassingDataObject: nmdc:435861196eb23a131dd888f1ef2f5733 +INFO:root:PassingDataObject: nmdc:20843c2c92f6990d13fb4c6789e5a3eb +INFO:root:PassingDataObject: nmdc:f58853552bc53101463b16b2c7857ae1 +INFO:root:PassingDataObject: nmdc:2e6d5782c79a88ba4d2ab029f5296342 +INFO:root:PassingDataObject: nmdc:83e3f354f88951b3b29067357fb44049 +INFO:root:PassingDataObject: nmdc:b72aec88b1e0d4be009b7bf0061de002 +INFO:root:PassingDataObject: nmdc:cf8451176c3dddb10cba626ce27db182 +INFO:root:PassingDataObject: nmdc:48213d2ca5a4351f2eaf07cf5ee64b9d +INFO:root:PassingDataObject: nmdc:cdb2e049d7b6150c02cd4bd8cfb25c18 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:75ca4b15b80db0c71b049791219404e8, ReadBased Analysis Activity for nmdc:mga09xb262 +INFO:root:PassingDataObject: nmdc:a3220485678083584c0cd96538266154 +INFO:root:PassingDataObject: nmdc:ae82ad7f6ef409bf557cd95200db0576 +INFO:root:PassingDataObject: nmdc:58a8c59bcd7e95bec7041568befb394c +INFO:root:PassingDataObject: nmdc:c68c1e96cf048216096d2f908950ce58 +INFO:root:PassingDataObject: nmdc:4c64a122b5053468e5904100feb28521 +INFO:root:PassingDataObject: nmdc:515662115e5e8009f240b8cc6ab8e89e +INFO:root:PassingDataObject: nmdc:4f924b46dbb685cae45a9cb4e753c55d +INFO:root:PassingDataObject: nmdc:4717d8d0b50e4ee7effb9694322ad651 +INFO:root:PassingDataObject: nmdc:c14cf922bfa47d302735f8d124c2044a +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452711 +INFO:root:found 3 records +INFO:root:record: nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb, Assembly Activity for nmdc:mga00xqw92 +INFO:root:PassingDataObject: nmdc:b79f108b15af1c0da7439054657c7c40 +INFO:root:PassingDataObject: nmdc:5cfaf0f416985c95456cd1a1af49af8d +INFO:root:PassingDataObject: nmdc:89a207e5a8b4444861952d25b063d4fd +INFO:root:PassingDataObject: nmdc:24d97486a967b3fd21649c9460ce6052 +INFO:root:PassingDataObject: nmdc:6d23086776e791cc9b831fdffc50c015 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:75ca4b15b80db0c71b049791219404e8, Assembly Activity for nmdc:mga09xb262 +INFO:root:PassingDataObject: nmdc:494bc5a10feea1d212ef6e78c41e9219 +INFO:root:PassingDataObject: nmdc:9e5efac1980fa315220d275ef28eb1f9 +INFO:root:PassingDataObject: nmdc:669b4675e850a65dcb51b3b216c20d6e +INFO:root:PassingDataObject: nmdc:46af7d34fb3daa2a810c8231d33cd162 +INFO:root:PassingDataObject: nmdc:8dfb458365ae14620bb703154aa9374e +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:1aecdf9f1389a18c990e9215194aef00, Assembly Activity for nmdc:mga0qpgt42 +INFO:root:PassingDataObject: nmdc:e6b8fcbdc0a9e29bf1971d4bc14d05cd +INFO:root:PassingDataObject: nmdc:99477f4232da611a897a65b6088f9b54 +INFO:root:PassingDataObject: nmdc:64f0a2619be9dc14337dafbe516747ff +INFO:root:PassingDataObject: nmdc:966c6512b802401fbb3f74736d5480d4 +INFO:root:PassingDataObject: nmdc:e164f76f15a2110c3a86f7d35598ef06 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452711 +INFO:root:found 3 records +INFO:root:record: nmdc:1aecdf9f1389a18c990e9215194aef00, Annotation Activity for nmdc:mga0qpgt42 +INFO:root:PassingDataObject: nmdc:ef6be4d254f3888605fc9acaa8905240 +INFO:root:PassingDataObject: nmdc:d7229cdeeac73305c5a6d6ce49d72624 +INFO:root:PassingDataObject: nmdc:0ab86c3531dd12a675f0448281f06d5c +INFO:root:PassingDataObject: nmdc:4e1bf949048418f5eeb825ef7db85445 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:1aecdf9f1389a18c990e9215194aef00 +ERROR:root:FailedDataObject: nmdc:f28ee587000d45d1e000626734479de5, +ERROR:root:FailedDataObject: nmdc:db8f9ca9a8b4d9a5a80aa4aad230977d, +ERROR:root:FailedDataObject: nmdc:8ba47dcb36a6878b431492a7a328f1d2, +ERROR:root:FailedDataObject: nmdc:5fddd3ccaf6dbcfa427cee79a5ef826d, +ERROR:root:FailedDataObject: nmdc:948bda68f97b1390073b74e13eab1a3d, +ERROR:root:FailedDataObject: nmdc:f22d96b2b4e06bf5093e542190e73744, +ERROR:root:FailedDataObject: nmdc:45003f47209813a47d9a9e48645717a2, +ERROR:root:FailedDataObject: nmdc:e43c5e6ca9d428fbc828e62ab5d5731a, +ERROR:root:FailedDataObject: nmdc:15c906ed7fb867608190fe78e41011a3, +ERROR:root:FailedDataObject: nmdc:81df0922ec4590f51732601ac6b27af1, +ERROR:root:FailedDataObject: nmdc:246752782b202a81385617b0e1c7bd6e, +ERROR:root:FailedDataObject: nmdc:89781dc81fb24a566d3b0837f2a25ed7, +ERROR:root:FailedDataObject: nmdc:a1c15a9fb3c0ef7913528778750450be, +ERROR:root:FailedDataObject: nmdc:0cf1d82ca18bd35a2a06b2b79cfa6c3a, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1aecdf9f1389a18c990e9215194aef00, Annotation Activity for nmdc:mga0qpgt42 +INFO:root:record: nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb, Annotation Activity for nmdc:mga00xqw92 +INFO:root:PassingDataObject: nmdc:24559de147969c1d2787653ef56a8e04 +INFO:root:PassingDataObject: nmdc:2177a0f1992095a768307ce182749b31 +INFO:root:PassingDataObject: nmdc:faf0aa8c009b7936c3587c25498d0420 +INFO:root:PassingDataObject: nmdc:72a6f589b6d4956f35b3224567e93786 +INFO:root:PassingDataObject: nmdc:58fcdad1cb6c3615813fd47385fc42b8 +INFO:root:PassingDataObject: nmdc:193a0b7d7752273fe7f051db9a97d426 +INFO:root:PassingDataObject: nmdc:c837a7ac63df1965b1cc7b6549fcb730 +INFO:root:PassingDataObject: nmdc:0b9e6431f50f6ff4aea93949c4f8b800 +INFO:root:PassingDataObject: nmdc:986041a42129a19e806a010c43659875 +INFO:root:PassingDataObject: nmdc:e9850775cef6abc2845ba666f729f1a6 +INFO:root:PassingDataObject: nmdc:ca8a3f063dd58156f9e20cb0bc9551ed +INFO:root:PassingDataObject: nmdc:57027a323ce7b7ea23458aae2246829e +INFO:root:PassingDataObject: nmdc:8bc840b9a7e75a8ee85e84237dfeeeeb +INFO:root:PassingDataObject: nmdc:86f45495728393068de8500bc1d643a9 +INFO:root:PassingDataObject: nmdc:dd55a0be858d68f7bf1b99762d38d4ff +INFO:root:PassingDataObject: nmdc:97a5c15727b97a7cb71a674405181e82 +INFO:root:PassingDataObject: nmdc:74bf21fc6041e062002c3a5b3d21e196 +INFO:root:PassingDataObject: nmdc:a012a23d3c5daf9630740edfea448eda +INFO:root:PassingDataObject: nmdc:71a0b35590e0fc8908895dfe226f2a77 +INFO:root:PassingDataObject: nmdc:150fd907267a30b1890bf6694d629ac3 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb, Annotation Activity for nmdc:mga00xqw92 +INFO:root:record: nmdc:75ca4b15b80db0c71b049791219404e8, Annotation Activity for nmdc:mga09xb262 +INFO:root:PassingDataObject: nmdc:6d0f2513120b0f33fc0ccbf7c239ea25 +INFO:root:PassingDataObject: nmdc:ec5996835fac82d38563510b5ce2c242 +INFO:root:PassingDataObject: nmdc:dc17fa8465874788c1d0e97d71c2ce56 +INFO:root:PassingDataObject: nmdc:1eeadd0e39023abb12d5528b3a6cbd89 +INFO:root:PassingDataObject: nmdc:d2df641684d09e896e35018e49fc8e9f +INFO:root:PassingDataObject: nmdc:67cb378cb66438e577d9180998f1dd2e +INFO:root:PassingDataObject: nmdc:987b70ed09c3fdf0a60170b96116dead +INFO:root:PassingDataObject: nmdc:d48375e358aefda43b22b3aee8caa930 +INFO:root:PassingDataObject: nmdc:472f56288e7f1f258e629663be3a6b46 +INFO:root:PassingDataObject: nmdc:43d8cb2e4302d0fdd940cc078705b8a6 +INFO:root:PassingDataObject: nmdc:61fd019e19f4ef35d8bba529da9cdfce +INFO:root:PassingDataObject: nmdc:2d38e6ef3af3378521e2bb7396cc0fb9 +INFO:root:PassingDataObject: nmdc:80575558c3f8f0820d4b0a91d91ccf21 +INFO:root:PassingDataObject: nmdc:77d8f350753818d8934c1b819cbe7ae0 +INFO:root:PassingDataObject: nmdc:0ccb1258cf7f7c1cb136155dc4bcba19 +INFO:root:PassingDataObject: nmdc:a84051c9cb3a07dadfaa1d50b1eb6ddc +INFO:root:PassingDataObject: nmdc:d025f164e1e6d3db918b77709f04fbfb +INFO:root:PassingDataObject: nmdc:0a9820db4b9ed5ecfc7dd40d98bca85c +INFO:root:PassingDataObject: nmdc:0319931dabdfb41aa68488e66f6dbccb +INFO:root:PassingDataObject: nmdc:dbf6364086537319880ca2dcc0376fd3 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:75ca4b15b80db0c71b049791219404e8 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:75ca4b15b80db0c71b049791219404e8, Annotation Activity for nmdc:mga09xb262 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 3 +INFO:root:set_name: mags_activity_set for gold:Gp0452711 +INFO:root:found 3 records +INFO:root:record: nmdc:1aecdf9f1389a18c990e9215194aef00, MAGs Analysis Activity for nmdc:mga0qpgt42 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1aecdf9f1389a18c990e9215194aef00 +ERROR:root:FailedDataObject: nmdc:feb1a5a8d2abec9cadd3c1b3948e1aff, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1aecdf9f1389a18c990e9215194aef00, MAGs Analysis Activity for nmdc:mga0qpgt42 +INFO:root:record: nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb, MAGs Analysis Activity for nmdc:mga00xqw92 +INFO:root:PassingDataObject: nmdc:e622953c088d823d6020432571d95b37 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d7ba3ce6c9cc7181b35fcc7a414b9fcb, MAGs Analysis Activity for nmdc:mga00xqw92 +INFO:root:record: nmdc:75ca4b15b80db0c71b049791219404e8, MAGs Analysis Activity for nmdc:mga09xb262 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:75ca4b15b80db0c71b049791219404e8 +ERROR:root:FailedDataObject: nmdc:0fc504c52380429027d325e204c6f790, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:75ca4b15b80db0c71b049791219404e8, MAGs Analysis Activity for nmdc:mga09xb262 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452711 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-nxvgq919 +INFO:root:legacy_id: gold:Gp0452647 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-nxvgq919 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:1222ab524349aaaacc7e952a051f72d3 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7cab4aaf083c36be7e8fb35fafde7ae1 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452647 +INFO:root:found 2 records +INFO:root:record: nmdc:e821bcd29c2405bc1bcfb46aead5ce9e, Read QC Activity for nmdc:mga00z8128 +INFO:root:PassingDataObject: nmdc:02e44728b136f0c187aa72022ef56614 +INFO:root:PassingDataObject: nmdc:cc147f0436899eb721956dea7b223711 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:0989374f61d482335b2bce760006be89, Read QC Activity for nmdc:mga0yz6194 +INFO:root:PassingDataObject: nmdc:c17bdddf065c432df4c1bff6c14c11e9 +INFO:root:PassingDataObject: nmdc:09dd9e1f5657f67b7970b6b7d363712d +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452647 +INFO:root:found 2 records +INFO:root:record: nmdc:e821bcd29c2405bc1bcfb46aead5ce9e, ReadBased Analysis Activity for nmdc:mga00z8128 +INFO:root:PassingDataObject: nmdc:056950dc0d1b346b1edceabcb3184046 +INFO:root:PassingDataObject: nmdc:53b38cadc5bedcc2285a609fed675fba +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:e821bcd29c2405bc1bcfb46aead5ce9e +ERROR:root:FailedDataObject: nmdc:7d39f766ad6f89cdfa3fd15088514cc2, +ERROR:root:FailedDataObject: nmdc:fe9743d9e4cf4d7cf2e186b028824986, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:e821bcd29c2405bc1bcfb46aead5ce9e +ERROR:root:FailedDataObject: nmdc:1f2debc38737cfd9511c0dd42233ca1e, +ERROR:root:FailedDataObject: nmdc:bc8d3106f4939096d4970740b63aede3, +ERROR:root:FailedDataObject: nmdc:f586f3adf35c7efe501156cf532ce18f, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e821bcd29c2405bc1bcfb46aead5ce9e, ReadBased Analysis Activity for nmdc:mga00z8128 +INFO:root:record: nmdc:0989374f61d482335b2bce760006be89, ReadBased Analysis Activity for nmdc:mga0yz6194 +INFO:root:PassingDataObject: nmdc:b9b27ee31cf4756185dcf70e1d5417cb +INFO:root:PassingDataObject: nmdc:67c36ca01edf67d4fae0f7a543883242 +INFO:root:PassingDataObject: nmdc:b604f8592c7d33ea737ea393040f3c53 +INFO:root:PassingDataObject: nmdc:a10e8ef9e14155b20d5933120171b397 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:0989374f61d482335b2bce760006be89 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:0989374f61d482335b2bce760006be89 +ERROR:root:FailedDataObject: nmdc:785b141dc77c3845099c08586c1f38c3, +ERROR:root:FailedDataObject: nmdc:c2238b47a6023adf6e0e69b30907d384, +ERROR:root:FailedDataObject: nmdc:eb0b514a0948001de7038742bccb0528, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0989374f61d482335b2bce760006be89, ReadBased Analysis Activity for nmdc:mga0yz6194 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452647 +INFO:root:found 2 records +INFO:root:record: nmdc:e821bcd29c2405bc1bcfb46aead5ce9e, Assembly Activity for nmdc:mga00z8128 +INFO:root:PassingDataObject: nmdc:de3cc6b47625c59bdfae11a5a8d4854a +INFO:root:PassingDataObject: nmdc:69d69db29ec69585c80e94312dfdaff4 +INFO:root:PassingDataObject: nmdc:4452c587fc8e44a07c5a1dfccf7f0a93 +INFO:root:PassingDataObject: nmdc:fe9ced3e5c27d3c028748f1eb9c11067 +INFO:root:PassingDataObject: nmdc:a5fbad2537e44b4bb9ae1c93118b5b10 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:0989374f61d482335b2bce760006be89, Assembly Activity for nmdc:mga0yz6194 +INFO:root:PassingDataObject: nmdc:4ef188bc49c3f23f830f3fdc1e36a0a0 +INFO:root:PassingDataObject: nmdc:8defd62cb419486ca6919520d527e1a1 +INFO:root:PassingDataObject: nmdc:7edaabc5ed2b77cfd6fb6bbbdb842880 +INFO:root:PassingDataObject: nmdc:8500a398776aef12b076654932e5254f +INFO:root:PassingDataObject: nmdc:6e211b31bd95f8fd673c3e02550bec47 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452647 +INFO:root:found 2 records +INFO:root:record: nmdc:e821bcd29c2405bc1bcfb46aead5ce9e, Annotation Activity for nmdc:mga00z8128 +INFO:root:PassingDataObject: nmdc:afdb0f6fd1a6f983525d0f9b429121cf +INFO:root:PassingDataObject: nmdc:90881c3b86c274392b0de5640ee853d0 +INFO:root:PassingDataObject: nmdc:5c4387dc6423fa8b4ff3e22e44e6aee5 +INFO:root:PassingDataObject: nmdc:d48910a261f1f5798c42f3428a47440d +INFO:root:PassingDataObject: nmdc:6e2f54e976693b72807cccd73810a845 +INFO:root:PassingDataObject: nmdc:97d83a97d912ee75aaa02961b8c957d0 +INFO:root:PassingDataObject: nmdc:e5da8c2555b094b8ad1647df2d9fdc10 +INFO:root:PassingDataObject: nmdc:c610f705c44a909e78b1a96b4ac47763 +INFO:root:PassingDataObject: nmdc:bbd989b0fd8c97176b583a74ffdbea14 +INFO:root:PassingDataObject: nmdc:49855c71ba1c2fd4072e075133d73ed5 +INFO:root:PassingDataObject: nmdc:22992dd6212d6dc6f4803030896ff4ff +INFO:root:PassingDataObject: nmdc:c8494324754fc4a511275d11fa15cb3a +INFO:root:PassingDataObject: nmdc:db12b1b7d3b3e3e951e31c60943a0574 +INFO:root:PassingDataObject: nmdc:92c6d074dc432af485503a73e9982968 +INFO:root:PassingDataObject: nmdc:03509f58474b2e2146e5988918e5d8d5 +INFO:root:PassingDataObject: nmdc:3d9203ee820c33dcfdb7067c0abbb399 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:e821bcd29c2405bc1bcfb46aead5ce9e +ERROR:root:failing_data_objects: 16 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e821bcd29c2405bc1bcfb46aead5ce9e, Annotation Activity for nmdc:mga00z8128 +INFO:root:record: nmdc:0989374f61d482335b2bce760006be89, Annotation Activity for nmdc:mga0yz6194 +INFO:root:PassingDataObject: nmdc:d98c1a365a262a7e104430687bbde91d +INFO:root:PassingDataObject: nmdc:1c24a2810a61dd39a207ded40ad3622f +INFO:root:PassingDataObject: nmdc:1e388bfa7f837a786ced0728f07e5693 +INFO:root:PassingDataObject: nmdc:5be4930b6c3d0352cae3dd3456a3cf15 +INFO:root:PassingDataObject: nmdc:2177d9d4251ac574b4ea1b7af300a380 +INFO:root:PassingDataObject: nmdc:6113bcd0a62b63defa03d8ed3794ef9a +INFO:root:PassingDataObject: nmdc:c68f0055c3670c671a1f4971157075cb +INFO:root:PassingDataObject: nmdc:355863ca255679ef714da8b11fb2e80d +INFO:root:PassingDataObject: nmdc:a70d7b5cc835c0ad216fbb08b7f12e28 +INFO:root:PassingDataObject: nmdc:0ddd0174ac38ca1180161936385f16ef +INFO:root:PassingDataObject: nmdc:d67d1fa536be1ed9da307a3c3bcd043f +INFO:root:PassingDataObject: nmdc:3450a6a72aff4791c8934a242a303efe +INFO:root:PassingDataObject: nmdc:a63e7cc66b79a247031034863f0d8088 +INFO:root:PassingDataObject: nmdc:e7dbe5a7413b3a067dafd5e05f708070 +INFO:root:PassingDataObject: nmdc:dafc9f4ed14d73a69859f66b5616a201 +INFO:root:PassingDataObject: nmdc:4b24e6cb5da27b050d147d128f5d6567 +INFO:root:PassingDataObject: nmdc:09a67020392b804e269ff1a447e2e118 +INFO:root:PassingDataObject: nmdc:2223b5b2169b0cd068cdf8f8a284dfa9 +INFO:root:PassingDataObject: nmdc:9bad65182ef27aeb1315668a0ec94d4c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:0989374f61d482335b2bce760006be89 +ERROR:root:FailedDataObject: nmdc:8bc07fcb00df7f1a3c7f0a84d56364bd, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0989374f61d482335b2bce760006be89, Annotation Activity for nmdc:mga0yz6194 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452647 +INFO:root:found 2 records +INFO:root:record: nmdc:e821bcd29c2405bc1bcfb46aead5ce9e, MAGs Analysis Activity for nmdc:mga00z8128 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e821bcd29c2405bc1bcfb46aead5ce9e +ERROR:root:FailedDataObject: nmdc:54835d7b489fb68c9ef31b3d4d727493, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e821bcd29c2405bc1bcfb46aead5ce9e, MAGs Analysis Activity for nmdc:mga00z8128 +INFO:root:record: nmdc:0989374f61d482335b2bce760006be89, MAGs Analysis Activity for nmdc:mga0yz6194 +INFO:root:PassingDataObject: nmdc:522131a0cf3f9fa0bedfbb28c59d30e0 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0989374f61d482335b2bce760006be89 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0989374f61d482335b2bce760006be89, MAGs Analysis Activity for nmdc:mga0yz6194 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452647 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-17560t71 +INFO:root:legacy_id: gold:Gp0452676 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-17560t71 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b10b6876ceba41577036c8979a062ac9 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452676 +INFO:root:found 1 records +INFO:root:record: nmdc:cced7f353b0c82fe53453a2084e474fa, Read QC Activity for nmdc:mga06y4x38 +INFO:root:PassingDataObject: nmdc:b5fb5eee19844b6497456e5ce57de53d +INFO:root:PassingDataObject: nmdc:f4c058b059b5641e8f9ae32795ad1c98 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452676 +INFO:root:found 1 records +INFO:root:record: nmdc:cced7f353b0c82fe53453a2084e474fa, ReadBased Analysis Activity for nmdc:mga06y4x38 +INFO:root:PassingDataObject: nmdc:610183c8b55d4288b6d41a1ef60d23e7 +INFO:root:PassingDataObject: nmdc:0fed25bc1c56c919eceec35c9cf7c3b7 +INFO:root:PassingDataObject: nmdc:7767908d2e46ce0e5ae82d2589da0bc8 +INFO:root:PassingDataObject: nmdc:5695e2bc559e0705556f685483b97385 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:cced7f353b0c82fe53453a2084e474fa +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:cced7f353b0c82fe53453a2084e474fa +ERROR:root:FailedDataObject: nmdc:424264b5f1e7585ea645e2b37e739dbe, +ERROR:root:FailedDataObject: nmdc:f8edc1f7aa9c97e0d3aca203bedc27b9, +ERROR:root:FailedDataObject: nmdc:52b82daeeb6689f4737eaa9483181908, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:cced7f353b0c82fe53453a2084e474fa, ReadBased Analysis Activity for nmdc:mga06y4x38 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452676 +INFO:root:found 1 records +INFO:root:record: nmdc:cced7f353b0c82fe53453a2084e474fa, Assembly Activity for nmdc:mga06y4x38 +INFO:root:PassingDataObject: nmdc:bc8df63d74d93eb697e6cbb14f45f21f +INFO:root:PassingDataObject: nmdc:c99f6d0d664a02ea8965df84af91b113 +INFO:root:PassingDataObject: nmdc:4736c2340f2e78487f161b346cdcf7cc +INFO:root:PassingDataObject: nmdc:e3032a17d55816371f5f65fea5a910b6 +INFO:root:PassingDataObject: nmdc:1c7dcbd84a268ca3a371731d8160fa81 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452676 +INFO:root:found 1 records +INFO:root:record: nmdc:cced7f353b0c82fe53453a2084e474fa, Annotation Activity for nmdc:mga06y4x38 +INFO:root:PassingDataObject: nmdc:142e5246b2840773e2f6219c96af17ff +INFO:root:PassingDataObject: nmdc:84ae6f9e9dec85ee1e59b63762068858 +INFO:root:PassingDataObject: nmdc:1b5c5c391efa8966b7585c0e0517a879 +INFO:root:PassingDataObject: nmdc:3667f64303c14475ebe690112d48c3d4 +INFO:root:PassingDataObject: nmdc:34e8809a67b46dfbf8f710b3ebaaa141 +INFO:root:PassingDataObject: nmdc:2ecd1e2737a68693229629ea474a4998 +INFO:root:PassingDataObject: nmdc:7cb5870723c935c70325172c903df603 +INFO:root:PassingDataObject: nmdc:74bc77c91f37d2480c6ffd69995fb3d0 +INFO:root:PassingDataObject: nmdc:f4037512e970a5b539e262f88e6c49e5 +INFO:root:PassingDataObject: nmdc:7d92d28c580ade4d61e8f9898d7c5c7b +INFO:root:PassingDataObject: nmdc:fe75f3fc6d307cddf83d72c2b1af39fe +INFO:root:PassingDataObject: nmdc:853fa9285f13fc1079cbb1b177b8f98b +INFO:root:PassingDataObject: nmdc:7c847f82ca84ebd6a28619ab2da56e6f +INFO:root:PassingDataObject: nmdc:69777380d88a21b3506ef53ff259cf67 +INFO:root:PassingDataObject: nmdc:c000b2d25a0f67018525a6204f3cd8c9 +INFO:root:PassingDataObject: nmdc:7990530383c1c9ab8623284528df6489 +INFO:root:PassingDataObject: nmdc:19d5bb639e8e379dd548c415424107a6 +INFO:root:PassingDataObject: nmdc:9a6c139450d66ccef4e3adaca8fda83f +INFO:root:PassingDataObject: nmdc:09451a0be37607a1f206f5fe679699e4 +INFO:root:PassingDataObject: nmdc:dab02996e6031e0e9317fdd1c29f64ea +INFO:root:PassingDataObject: nmdc:1ba7502bac49494b5e2f1a748ce8e983 +INFO:root:PassingDataObject: nmdc:eda57cceb8769b32d302494644bd015e +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452676 +INFO:root:found 1 records +INFO:root:record: nmdc:cced7f353b0c82fe53453a2084e474fa, MAGs Analysis Activity for nmdc:mga06y4x38 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:cced7f353b0c82fe53453a2084e474fa +ERROR:root:FailedDataObject: nmdc:3368c35e4ab73101d6e97ebe90267ae4, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:cced7f353b0c82fe53453a2084e474fa, MAGs Analysis Activity for nmdc:mga06y4x38 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452676 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-p3ksqp19 +INFO:root:legacy_id: gold:Gp0452646 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-p3ksqp19 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b8265b29191e14fd08c495972e6d54ae +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452646 +INFO:root:found 1 records +INFO:root:record: nmdc:fac015775c319cc8ca216d7d93804bea, Read QC Activity for nmdc:mga0k2rk88 +INFO:root:PassingDataObject: nmdc:849863edff18a7b59cd1da0fa2908155 +INFO:root:PassingDataObject: nmdc:4519cede16d3439657b7a79dbbfd42a6 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452646 +INFO:root:found 1 records +INFO:root:record: nmdc:fac015775c319cc8ca216d7d93804bea, ReadBased Analysis Activity for nmdc:mga0k2rk88 +INFO:root:PassingDataObject: nmdc:72bf0254e82da9dd72c63d2ff8a0428d +INFO:root:PassingDataObject: nmdc:073b8c4fc8672bc4008c43a065a69b90 +INFO:root:PassingDataObject: nmdc:48f2c3e1fc23980e5551a2db5a3970c9 +INFO:root:PassingDataObject: nmdc:68220055de6cd58d4331452c14e5231d +INFO:root:PassingDataObject: nmdc:b73e74972617651dac3204273a0ba7bd +INFO:root:PassingDataObject: nmdc:27381411805c4449397fee83fd5841b4 +INFO:root:PassingDataObject: nmdc:9f9f620160786c77a24c046331da4661 +INFO:root:PassingDataObject: nmdc:d613d3a92c3f0bdbb62160511fd91292 +INFO:root:PassingDataObject: nmdc:62a1b182a2d17f8b3a69913716e1802d +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452646 +INFO:root:found 1 records +INFO:root:record: nmdc:fac015775c319cc8ca216d7d93804bea, Assembly Activity for nmdc:mga0k2rk88 +INFO:root:PassingDataObject: nmdc:da35b9e1eac9a0e72dbaf347b349310f +INFO:root:PassingDataObject: nmdc:e5bd29d97ad011db1f307aeacc9ec8e0 +INFO:root:PassingDataObject: nmdc:02ee051d6155a36c9614c01af54c15b4 +INFO:root:PassingDataObject: nmdc:11e1de36a660775f8733fc958db3cfa5 +INFO:root:PassingDataObject: nmdc:f9f145c69a0ea63574c90b1a05fb7ac0 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452646 +INFO:root:found 1 records +INFO:root:record: nmdc:fac015775c319cc8ca216d7d93804bea, Annotation Activity for nmdc:mga0k2rk88 +INFO:root:PassingDataObject: nmdc:291123ab2928c9e69d58082b4b0f4dac +INFO:root:PassingDataObject: nmdc:c3028c81f0b35131d4c05a0c1cdfae42 +INFO:root:PassingDataObject: nmdc:d913d83e89f22b12867b0d0f467db3fd +INFO:root:PassingDataObject: nmdc:3be685797bff1b0494f3b39452fec43c +INFO:root:PassingDataObject: nmdc:787cd91d8324aae0310f163d140ae64b +INFO:root:PassingDataObject: nmdc:1a686faa81b0a1ef3abe9a0a762d5808 +INFO:root:PassingDataObject: nmdc:d95fedd2987490ee3d2a5a53b95d3baf +INFO:root:PassingDataObject: nmdc:42f384735fb64bcba307cc13b82c6674 +INFO:root:PassingDataObject: nmdc:e1b7c586ad8354d9ba7b3e0227d1e934 +INFO:root:PassingDataObject: nmdc:053dfb18afae57b8638515186c1e45d4 +INFO:root:PassingDataObject: nmdc:50e8aab31b50db265c83832d60d911b1 +INFO:root:PassingDataObject: nmdc:015579119f2c1a107710d158c67121d7 +INFO:root:PassingDataObject: nmdc:30b2049ed1c4e7bf720e8497f314f42c +INFO:root:PassingDataObject: nmdc:50956d4f0cb419f485c408fa4605b742 +INFO:root:PassingDataObject: nmdc:97704efbb050d50be86074767f540b5f +INFO:root:PassingDataObject: nmdc:1e12b5e7f1e16d355e53875f0ba569c3 +INFO:root:PassingDataObject: nmdc:1f1d95772b89a76bbe3538e4ec9c09d6 +INFO:root:PassingDataObject: nmdc:56606b146e92e9e9ca63568da4779155 +INFO:root:PassingDataObject: nmdc:1f66e8d4e047386105037a9e4f1a33e2 +INFO:root:PassingDataObject: nmdc:aaef5a44a18c1936755cf76a56b9a3f6 +INFO:root:PassingDataObject: nmdc:9b7ff24e1b1ff280ba9f78f0339c3711 +INFO:root:PassingDataObject: nmdc:9f60b296dcb5c611d4c085248f57eeb3 +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452646 +INFO:root:found 1 records +INFO:root:record: nmdc:fac015775c319cc8ca216d7d93804bea, MAGs Analysis Activity for nmdc:mga0k2rk88 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fac015775c319cc8ca216d7d93804bea +ERROR:root:FailedDataObject: nmdc:d86459b96dac35eea591121680c5e4d7, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fac015775c319cc8ca216d7d93804bea, MAGs Analysis Activity for nmdc:mga0k2rk88 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452646 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-4k7jyr13 +INFO:root:legacy_id: gold:Gp0452651 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-4k7jyr13 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c82b94f34e1f3fb67754bcb1852f1ce1 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452651 +INFO:root:found 1 records +INFO:root:record: nmdc:c1fc00c7c796fa2e8875a575bd534cb6, Read QC Activity for nmdc:mga0ctm046 +INFO:root:PassingDataObject: nmdc:56f30a7af4a8aecaf2136db97b70ee25 +INFO:root:PassingDataObject: nmdc:53c67e834ddcad01bea5ee2369876dd6 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452651 +INFO:root:found 1 records +INFO:root:record: nmdc:c1fc00c7c796fa2e8875a575bd534cb6, ReadBased Analysis Activity for nmdc:mga0ctm046 +INFO:root:PassingDataObject: nmdc:c80898eb2daeefcac8ef81f5726ada8e +INFO:root:PassingDataObject: nmdc:24d88958a6390338dce86b212b7e4e91 +INFO:root:PassingDataObject: nmdc:28e74200deba2d2b61199c3ec8b222ec +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:c1fc00c7c796fa2e8875a575bd534cb6 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:c1fc00c7c796fa2e8875a575bd534cb6 +ERROR:root:FailedDataObject: nmdc:fd02270c1a09dcf3cafc4832b8c9e6e7, +ERROR:root:FailedDataObject: nmdc:31dfefd838ca898f8e3e1ad1a35f750b, +ERROR:root:FailedDataObject: nmdc:66ac44e63f643dc5c232b5c0675312ae, +ERROR:root:FailedDataObject: nmdc:6bc2bc65842a1fa6f16c8fd34e73c307, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c1fc00c7c796fa2e8875a575bd534cb6, ReadBased Analysis Activity for nmdc:mga0ctm046 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452651 +INFO:root:found 1 records +INFO:root:record: nmdc:c1fc00c7c796fa2e8875a575bd534cb6, Assembly Activity for nmdc:mga0ctm046 +INFO:root:PassingDataObject: nmdc:8ccc299d9ee7ba3ea16de406e2cd0e7b +INFO:root:PassingDataObject: nmdc:61def899bee91da05949ecca86632c8a +INFO:root:PassingDataObject: nmdc:0b096bbd59b95ec086a8eb4efaf75544 +INFO:root:PassingDataObject: nmdc:89c9956a057bdd41107cf34d32dac86e +INFO:root:PassingDataObject: nmdc:59efca44139e1eb56f8e9b9bdc784776 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452651 +INFO:root:found 1 records +INFO:root:record: nmdc:c1fc00c7c796fa2e8875a575bd534cb6, Annotation Activity for nmdc:mga0ctm046 +INFO:root:PassingDataObject: nmdc:9d87e1ffd44cbf612a92bc66b7f82a49 +INFO:root:PassingDataObject: nmdc:4c5df4dee79bf822a32784a2881e16dd +INFO:root:PassingDataObject: nmdc:b758736b2a7da70f575d7136305207c9 +INFO:root:PassingDataObject: nmdc:fc5c4bb35b42b7494d982b118437327b +INFO:root:PassingDataObject: nmdc:c48eb5598e6261c9db9aed3ed3eca529 +INFO:root:PassingDataObject: nmdc:887998f0c154f7f937b0a029b32702b9 +INFO:root:PassingDataObject: nmdc:66db5c057b18e3f2e445015ecd379ddd +INFO:root:PassingDataObject: nmdc:deeae08dba7ecc49e637659f2546619b +INFO:root:PassingDataObject: nmdc:b220f615cda5e27d569f7a37477eefd2 +INFO:root:PassingDataObject: nmdc:ed3e9a4af17bff895512f131013a5edc +INFO:root:PassingDataObject: nmdc:a9f4211ad01878590d257c0aebe916c9 +INFO:root:PassingDataObject: nmdc:4a4245cf2a59037af414efc8997c12dd +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:c1fc00c7c796fa2e8875a575bd534cb6 +ERROR:root:FailedDataObject: nmdc:ee4ee6f48b8585ffa1fa2447f6bdc7c5, +ERROR:root:failing_data_objects: 13 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c1fc00c7c796fa2e8875a575bd534cb6, Annotation Activity for nmdc:mga0ctm046 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452651 +INFO:root:found 1 records +INFO:root:record: nmdc:c1fc00c7c796fa2e8875a575bd534cb6, MAGs Analysis Activity for nmdc:mga0ctm046 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:c1fc00c7c796fa2e8875a575bd534cb6 +ERROR:root:FailedDataObject: nmdc:6147d3df37207319ed29ba030d50996d, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c1fc00c7c796fa2e8875a575bd534cb6, MAGs Analysis Activity for nmdc:mga0ctm046 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452651 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-2wqcm476 +INFO:root:legacy_id: gold:Gp0452680 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-2wqcm476 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8f9c4b970bcbf9cdea6895c081f962e8 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:21302b9ed5c8f40c7c5d491561ebf1db +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:92a6daf3f292de10d1990fdad8e84517 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452680 +INFO:root:found 3 records +INFO:root:record: nmdc:e89fd1ca5796894dce0f702e821e8e7d, Read QC Activity for nmdc:mga09n9y11 +INFO:root:PassingDataObject: nmdc:d154bc27eedca791e3424b5515bd16c4 +INFO:root:PassingDataObject: nmdc:dc19bb4a0108fd030520095848c9d432 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:80b5da00f4152bddc234d514f2de83df, Read QC Activity for nmdc:mga0c75490 +INFO:root:PassingDataObject: nmdc:cfbe6c3db950e725bdd7e333ce418bbf +INFO:root:PassingDataObject: nmdc:aa8c1ba4f6455e8d6bcb9a3c279f1e28 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:9216ae5a374e63124e03a6b6386003bf, Read QC Activity for nmdc:mga0n32g21 +INFO:root:PassingDataObject: nmdc:474491c8f0f74c57eae8c6e78042a4ab +INFO:root:PassingDataObject: nmdc:b15fb47aa53af7c92a80b7ffef1f56f8 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452680 +INFO:root:found 3 records +INFO:root:record: nmdc:80b5da00f4152bddc234d514f2de83df, ReadBased Analysis Activity for nmdc:mga0c75490 +INFO:root:PassingDataObject: nmdc:82e09134835c7070243a733b6e17420b +INFO:root:PassingDataObject: nmdc:61ebaabb7345f750d24d18c0da14e389 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:80b5da00f4152bddc234d514f2de83df +ERROR:root:FailedDataObject: nmdc:92133416558cf1dfc9b45c45d568e453, +ERROR:root:FailedDataObject: nmdc:b7325cce08ae061eb0c94ffd56658641, +ERROR:root:FailedDataObject: nmdc:2774965f6ed9b91cebec755a8e488e97, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:80b5da00f4152bddc234d514f2de83df +ERROR:root:FailedDataObject: nmdc:c047ac8c8fc93f8837a3514696cac7a0, +ERROR:root:FailedDataObject: nmdc:2213fcbb6261aa07b63a1857706daede, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:80b5da00f4152bddc234d514f2de83df, ReadBased Analysis Activity for nmdc:mga0c75490 +INFO:root:record: nmdc:e89fd1ca5796894dce0f702e821e8e7d, ReadBased Analysis Activity for nmdc:mga09n9y11 +INFO:root:PassingDataObject: nmdc:4fcb8be9207bf8741f07c469450d2f17 +INFO:root:PassingDataObject: nmdc:42d99a810a826dc6df737a5f06083836 +INFO:root:PassingDataObject: nmdc:a028569f5d676b2fd4c958098fc806d4 +INFO:root:PassingDataObject: nmdc:2601517a0e1e961c89bb7629e26740ed +INFO:root:PassingDataObject: nmdc:5f41799b13c178d24e46b23219cb764c +INFO:root:PassingDataObject: nmdc:fe824dce0d415e34abadebaf73414fbd +INFO:root:PassingDataObject: nmdc:2d4fb1788dd96d87f991b72090459537 +INFO:root:PassingDataObject: nmdc:eb069a549e7239104141b401a8abe1dd +INFO:root:PassingDataObject: nmdc:df2e868c03fa738f34fe53e1e503b412 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:9216ae5a374e63124e03a6b6386003bf, ReadBased Analysis Activity for nmdc:mga0n32g21 +INFO:root:PassingDataObject: nmdc:9a0997af0523c236dbf35b084756d134 +INFO:root:PassingDataObject: nmdc:efa53da8f9427a02de45a56304e53d4e +INFO:root:PassingDataObject: nmdc:c9a037c4deb15f03b62cca18d0a49ccb +INFO:root:PassingDataObject: nmdc:d9f7b3c7506d988ae75b2cc2ac6a20b1 +INFO:root:PassingDataObject: nmdc:b5fd96159c8856c4b48d361cecc99d3f +INFO:root:PassingDataObject: nmdc:4ac516cd317c4dd866076b044080e0d3 +INFO:root:PassingDataObject: nmdc:81cd3a3e52f51c4e5cd4cb3e208e0167 +INFO:root:PassingDataObject: nmdc:dcf134655efe130afb3ddbdb07829d3e +INFO:root:PassingDataObject: nmdc:d708ce657479c861d7bef86dc4f9d0ff +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452680 +INFO:root:found 3 records +INFO:root:record: nmdc:e89fd1ca5796894dce0f702e821e8e7d, Assembly Activity for nmdc:mga09n9y11 +INFO:root:PassingDataObject: nmdc:f508d2ecf6d50d96f973c96c47d970f4 +INFO:root:PassingDataObject: nmdc:6ce12b9013e5eadc90206f44bb668377 +INFO:root:PassingDataObject: nmdc:f7b2160d831849d13e099e93ab970c60 +INFO:root:PassingDataObject: nmdc:2e0a4d36acfc83376f4eddb489ab0191 +INFO:root:PassingDataObject: nmdc:a209f60a33e8dc3ce08762801c6b8362 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:80b5da00f4152bddc234d514f2de83df, Assembly Activity for nmdc:mga0c75490 +INFO:root:PassingDataObject: nmdc:46a72c360978206ac5950376f51ad9f1 +INFO:root:PassingDataObject: nmdc:7e53710d66c2e9061d1d79055c2e6c64 +INFO:root:PassingDataObject: nmdc:b5839cbc8cb8d09560739507a394cac2 +INFO:root:PassingDataObject: nmdc:720635f7a82d1988128f18143e003e75 +INFO:root:PassingDataObject: nmdc:b19a1fa5aaa608c4d2dac28eaf186faa +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:9216ae5a374e63124e03a6b6386003bf, Assembly Activity for nmdc:mga0n32g21 +INFO:root:PassingDataObject: nmdc:291b1f94970f35928a5ff2d7e00539af +INFO:root:PassingDataObject: nmdc:14c51ca132013466945ff972d881948c +INFO:root:PassingDataObject: nmdc:1b06a1fb14418235cc8e62591be8c1b3 +INFO:root:PassingDataObject: nmdc:d05fffaf72db7f82410db743907bbe66 +INFO:root:PassingDataObject: nmdc:df672787e49b7fbfbab641e3c289ee78 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452680 +INFO:root:found 3 records +INFO:root:record: nmdc:e89fd1ca5796894dce0f702e821e8e7d, Annotation Activity for nmdc:mga09n9y11 +INFO:root:PassingDataObject: nmdc:f6c6ebf911d79308049966a207017348 +INFO:root:PassingDataObject: nmdc:a18bae313e4cbc69997f7646fb2d85d1 +INFO:root:PassingDataObject: nmdc:0d7f05825e5d73fe0eb4bee760f63e4a +INFO:root:PassingDataObject: nmdc:f38425fcd1ad1cc5e5a5b2b86a12333d +INFO:root:PassingDataObject: nmdc:b554e023a1eb6309499e77874bfdae7a +INFO:root:PassingDataObject: nmdc:bff1cb29f746a18df99de148b3547bf4 +INFO:root:PassingDataObject: nmdc:ab3e47fb9c1cfd0fb5d30cdae2927f17 +INFO:root:PassingDataObject: nmdc:9c0e42da4899653a41e0bbc7449a6e9b +INFO:root:PassingDataObject: nmdc:d53fb394e1bd75e2b2a32f9eae0fbf4b +INFO:root:PassingDataObject: nmdc:aa57fdcf5da758e1951fe880774aa66c +INFO:root:PassingDataObject: nmdc:335f71e2c6d18a5e84c322bf3effd0a8 +INFO:root:PassingDataObject: nmdc:12365988b717a1ee016a8d39896faa28 +INFO:root:PassingDataObject: nmdc:d7f16872ea448bb08020eb2b54e78905 +INFO:root:PassingDataObject: nmdc:25858fa18612696ba32869b7b77bf430 +INFO:root:PassingDataObject: nmdc:d1e9f75de468c9a588582f7dff805821 +INFO:root:PassingDataObject: nmdc:6645d632e7e769a3cf2703ecf26efb58 +INFO:root:PassingDataObject: nmdc:446d0b2824f9e51a8e3557e95e8373ce +INFO:root:PassingDataObject: nmdc:3649b06037b0a2d6bdca368a56aae20b +INFO:root:PassingDataObject: nmdc:6df0c51041a86bc0a45c13ccca74b661 +INFO:root:PassingDataObject: nmdc:0765efe266f79f4fcc7b696aa4c661c6 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:e89fd1ca5796894dce0f702e821e8e7d +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e89fd1ca5796894dce0f702e821e8e7d, Annotation Activity for nmdc:mga09n9y11 +INFO:root:record: nmdc:80b5da00f4152bddc234d514f2de83df, Annotation Activity for nmdc:mga0c75490 +INFO:root:PassingDataObject: nmdc:45cff0f3a6d22e292001a2b18aa324b9 +INFO:root:PassingDataObject: nmdc:6cae338c643b075952bf698ac664882d +INFO:root:PassingDataObject: nmdc:18a43d49b8b410d0b898a026869c3767 +INFO:root:PassingDataObject: nmdc:b5dc50fd9c6ad9dfd4296da1d2a0ec15 +INFO:root:PassingDataObject: nmdc:03524a86fbab11134d741b76fd3ce532 +INFO:root:PassingDataObject: nmdc:551b8e77126bc3802e7ce67c7d94e5ec +INFO:root:PassingDataObject: nmdc:9db73b999e1a5ef79c9d6d3718849fc1 +INFO:root:PassingDataObject: nmdc:9c42b554dc4475c2ba809de600be44b6 +INFO:root:PassingDataObject: nmdc:f2995a35b3077064c648d41c39037c4e +INFO:root:PassingDataObject: nmdc:765d21d9c03c092219d5eca43a165790 +INFO:root:PassingDataObject: nmdc:794d46826ce0e25ac1cfcbd0ea36753b +INFO:root:PassingDataObject: nmdc:268ebee68f5769af5244b13dc15da697 +INFO:root:PassingDataObject: nmdc:228e872fae6f320a1654bc61fe90cc7b +INFO:root:PassingDataObject: nmdc:6c32577df5631f5bbc418543aa8450e4 +INFO:root:PassingDataObject: nmdc:97c0dc39bcce0cd994267635d3a7717d +INFO:root:PassingDataObject: nmdc:ffb6045a462435b40879e5627e785a8c +INFO:root:PassingDataObject: nmdc:fbc7ed495cfbcf326190be84bd5bf369 +INFO:root:PassingDataObject: nmdc:67e7b19fe40747751d41df8bea671c7c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:80b5da00f4152bddc234d514f2de83df +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:80b5da00f4152bddc234d514f2de83df, Annotation Activity for nmdc:mga0c75490 +INFO:root:record: nmdc:9216ae5a374e63124e03a6b6386003bf, Annotation Activity for nmdc:mga0n32g21 +INFO:root:PassingDataObject: nmdc:e38f6adb05e52d80fceafc7acd631e11 +INFO:root:PassingDataObject: nmdc:9a5cae40af90d0cbefa4d0a77476dfbf +INFO:root:PassingDataObject: nmdc:bda1ab5daf13c348aefde206c5703b36 +INFO:root:PassingDataObject: nmdc:4afef834e07a7e42224554b8b936a8d0 +INFO:root:PassingDataObject: nmdc:19fc378bb58db21e6052c10b32748e46 +INFO:root:PassingDataObject: nmdc:84c68486371f322df172b4ec20941f84 +INFO:root:PassingDataObject: nmdc:f653a2e83c93de01f527a443478a6c37 +INFO:root:PassingDataObject: nmdc:490391087183a515b520981c60d2d3c4 +INFO:root:PassingDataObject: nmdc:a1190c5b741a89f76daf44ad41a111ca +INFO:root:PassingDataObject: nmdc:84446f68eac4c56361445bcd4afdbf37 +INFO:root:PassingDataObject: nmdc:c2a3d8078c2ccc980100075071a8355e +INFO:root:PassingDataObject: nmdc:fb961674cdc888d341e0e0b8cac881bd +INFO:root:PassingDataObject: nmdc:a67911ccc3960c0aedc8c69aac69bea2 +INFO:root:PassingDataObject: nmdc:1e00403d2a3dbb1bf1e80f13d41e192a +INFO:root:PassingDataObject: nmdc:093b7f362fbb6089fa7fc9eccad31172 +INFO:root:PassingDataObject: nmdc:a1606aab0e0a1f8efc5d43838a158cab +INFO:root:PassingDataObject: nmdc:09adcb7990b2dfd9d87a2788b5536cb6 +INFO:root:PassingDataObject: nmdc:2dc9c63cbc9ab262ccbd6b5bb17f70c5 +INFO:root:PassingDataObject: nmdc:72bd9d289f14c5b883014eca60bfe656 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:9216ae5a374e63124e03a6b6386003bf +ERROR:root:FailedDataObject: nmdc:3f2ef5ae0418b6402660520274b8455e, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:9216ae5a374e63124e03a6b6386003bf, Annotation Activity for nmdc:mga0n32g21 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 3 +INFO:root:set_name: mags_activity_set for gold:Gp0452680 +INFO:root:found 3 records +INFO:root:record: nmdc:e89fd1ca5796894dce0f702e821e8e7d, MAGs Analysis Activity for nmdc:mga09n9y11 +INFO:root:PassingDataObject: nmdc:78a67b23e44cb157800da4ff5d9d412e +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e89fd1ca5796894dce0f702e821e8e7d +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e89fd1ca5796894dce0f702e821e8e7d, MAGs Analysis Activity for nmdc:mga09n9y11 +INFO:root:record: nmdc:80b5da00f4152bddc234d514f2de83df, MAGs Analysis Activity for nmdc:mga0c75490 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:80b5da00f4152bddc234d514f2de83df +ERROR:root:FailedDataObject: nmdc:6e9d0ed2bd2f3cad9c5ac21f6b6a1ce6, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:80b5da00f4152bddc234d514f2de83df, MAGs Analysis Activity for nmdc:mga0c75490 +INFO:root:record: nmdc:9216ae5a374e63124e03a6b6386003bf, MAGs Analysis Activity for nmdc:mga0n32g21 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:9216ae5a374e63124e03a6b6386003bf +ERROR:root:FailedDataObject: nmdc:1da41b1cf147af9be68414d84b89f049, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:9216ae5a374e63124e03a6b6386003bf, MAGs Analysis Activity for nmdc:mga0n32g21 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452680 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-49nftm85 +INFO:root:legacy_id: gold:Gp0452660 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-49nftm85 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b03fc1449892e8afee2d342c6fb11ee2 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ed215e0cc80c95fdba109f495e8459b5 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:fcd360aa1aaac5a93d8ab31e30ca614b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452660 +INFO:root:found 3 records +INFO:root:record: nmdc:064295f6128ea28b2b946d2fe7eaf438, Read QC Activity for nmdc:mga0mgyv87 +INFO:root:PassingDataObject: nmdc:06facc5719fa4ec56d4cdbedafd2ba7c +INFO:root:PassingDataObject: nmdc:bdf1b58e08facffe9ed79b47e2a05f8c +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:087ef193fc4b6cc2918b818bb4b67d31, Read QC Activity for nmdc:mga0qa7y25 +INFO:root:PassingDataObject: nmdc:cf5d489549f69b31a1a41ff8661822d2 +INFO:root:PassingDataObject: nmdc:e7c446f8806b8f7c85bd5fabe0d42bdd +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:c109f562fa430f15ed86ca54470596e4, Read QC Activity for nmdc:mga0aa1m26 +INFO:root:PassingDataObject: nmdc:5434a199ef74ea2456f18a336c601e1b +INFO:root:PassingDataObject: nmdc:f1f3d7a227a7e621fb0cfca975df12e3 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452660 +INFO:root:found 3 records +INFO:root:record: nmdc:c109f562fa430f15ed86ca54470596e4, ReadBased Analysis Activity for nmdc:mga0aa1m26 +INFO:root:PassingDataObject: nmdc:abd5d43093665afc83411b39f21c0ca3 +INFO:root:PassingDataObject: nmdc:2401bee4beaf0c7bf9af48826b77d419 +INFO:root:PassingDataObject: nmdc:887cc5fe8db93ab147f05563b98bd761 +INFO:root:PassingDataObject: nmdc:2d6ba83e9764edc09a3ba37402a20f24 +INFO:root:PassingDataObject: nmdc:b56606c799c527c98dc370dd809d4642 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:c109f562fa430f15ed86ca54470596e4 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:c109f562fa430f15ed86ca54470596e4 +ERROR:root:FailedDataObject: nmdc:84d75ae6188b6b10b99d40ebb74ae3a0, +ERROR:root:FailedDataObject: nmdc:785eec166d3dc3328958af38e5c704e3, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c109f562fa430f15ed86ca54470596e4, ReadBased Analysis Activity for nmdc:mga0aa1m26 +INFO:root:record: nmdc:087ef193fc4b6cc2918b818bb4b67d31, ReadBased Analysis Activity for nmdc:mga0qa7y25 +INFO:root:PassingDataObject: nmdc:0c2966d48c156c2ec7e54aa9af97c195 +INFO:root:PassingDataObject: nmdc:4c3901706422e675e6b6bf6da651d63b +INFO:root:PassingDataObject: nmdc:e444a4f65674a77fcd186062758c55f9 +INFO:root:PassingDataObject: nmdc:e7f1637cfe2c44c8b1e50770ec804da8 +INFO:root:PassingDataObject: nmdc:abf4509eb5b75bb75690430101b1f510 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:087ef193fc4b6cc2918b818bb4b67d31 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:087ef193fc4b6cc2918b818bb4b67d31 +ERROR:root:FailedDataObject: nmdc:ac0510e422c78d5d3a6a23b2ca9234d0, +ERROR:root:FailedDataObject: nmdc:7f65ed4920e3115c0dbfbb5012293c71, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:087ef193fc4b6cc2918b818bb4b67d31, ReadBased Analysis Activity for nmdc:mga0qa7y25 +INFO:root:record: nmdc:064295f6128ea28b2b946d2fe7eaf438, ReadBased Analysis Activity for nmdc:mga0mgyv87 +INFO:root:PassingDataObject: nmdc:cc8cec585134bc3512d961fab5e8e651 +INFO:root:PassingDataObject: nmdc:2360f097600626b11c0e5258b416ba5d +INFO:root:PassingDataObject: nmdc:175e8bd496e9c8c056b2d0d0540af92a +INFO:root:PassingDataObject: nmdc:0ac5802d290960776a165a90b5d966e5 +INFO:root:PassingDataObject: nmdc:43657128a84e4429ea9dd831163fe3e9 +INFO:root:PassingDataObject: nmdc:928c42c835326c1a3a9b66832144b9c8 +INFO:root:PassingDataObject: nmdc:0a17864b61552e9887060f9941110fbe +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:064295f6128ea28b2b946d2fe7eaf438 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:064295f6128ea28b2b946d2fe7eaf438 +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:064295f6128ea28b2b946d2fe7eaf438, ReadBased Analysis Activity for nmdc:mga0mgyv87 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452660 +INFO:root:found 3 records +INFO:root:record: nmdc:064295f6128ea28b2b946d2fe7eaf438, Assembly Activity for nmdc:mga0mgyv87 +INFO:root:PassingDataObject: nmdc:e1fc0a1d671781039c9d4f2f3a6dd9d4 +INFO:root:PassingDataObject: nmdc:9f44549b2de3776d37e987fc23124c81 +INFO:root:PassingDataObject: nmdc:dba0f73e8eafa3f98d8b351a4dc8731e +INFO:root:PassingDataObject: nmdc:4d869b4315bba737cf24f473b17b636c +INFO:root:PassingDataObject: nmdc:2201c1a5181bb2d044c89f70aef1a2d8 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:087ef193fc4b6cc2918b818bb4b67d31, Assembly Activity for nmdc:mga0qa7y25 +INFO:root:PassingDataObject: nmdc:86fe87c5b86c368d02dd1ccc95616a4e +INFO:root:PassingDataObject: nmdc:630beaa85ae0d1f1dd362a8743abe6d4 +INFO:root:PassingDataObject: nmdc:02ece4be18097764f18344ee54dcca05 +INFO:root:PassingDataObject: nmdc:eb01c330db71a8b3d8e905dbe13bd751 +INFO:root:PassingDataObject: nmdc:0f6bf61d0ea1017b845eec47c945360d +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:c109f562fa430f15ed86ca54470596e4, Assembly Activity for nmdc:mga0aa1m26 +INFO:root:PassingDataObject: nmdc:7a32878eb787ef7db81600894d608e4c +INFO:root:PassingDataObject: nmdc:e1c76e7dfe7490aef01e6ba85d76ad66 +INFO:root:PassingDataObject: nmdc:bdf202e4b58b75c4a5fe2443f56146e2 +INFO:root:PassingDataObject: nmdc:243bb81cff1610055ee641e3828be35d +INFO:root:PassingDataObject: nmdc:2151cbb356c5e90567a3b2e7b8615ccb +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452660 +INFO:root:found 3 records +INFO:root:record: nmdc:c109f562fa430f15ed86ca54470596e4, Annotation Activity for nmdc:mga0aa1m26 +INFO:root:PassingDataObject: nmdc:c60673700ca59c76e8a5fb3217efef6c +INFO:root:PassingDataObject: nmdc:219bee14ce20e41e7680cd70fdbdc0f6 +INFO:root:PassingDataObject: nmdc:7dd50094bbcabc1000c224ea186a68b4 +INFO:root:PassingDataObject: nmdc:5de5d62c3a3009fe3025d308407150ac +INFO:root:PassingDataObject: nmdc:af5d0512b47dfbd0c81903801c1dfdc1 +INFO:root:PassingDataObject: nmdc:31c91013b4bb6201956fb4044cb63b62 +INFO:root:PassingDataObject: nmdc:23063c8b43aadc4113d9dd562ad35802 +INFO:root:PassingDataObject: nmdc:c62b6c77bb7daeb884a1f1a8b0ed0991 +INFO:root:PassingDataObject: nmdc:cbe0591bac29133c0edce42dbc4b9b5a +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:c109f562fa430f15ed86ca54470596e4 +ERROR:root:FailedDataObject: nmdc:156ebd4af24695f83782375511c52a40, +ERROR:root:FailedDataObject: nmdc:8793b6631e66dbceacbc0d1f96668e8b, +ERROR:root:FailedDataObject: nmdc:e39649b0d1c7a0f43566960f6ecc059c, +ERROR:root:FailedDataObject: nmdc:b6628295ba9fd52a1bbd58db35b13b9e, +ERROR:root:FailedDataObject: nmdc:fa3122edc6e3fff20bc2e4fcac7a3e7c, +ERROR:root:FailedDataObject: nmdc:17ef106ed95fcc5eb02b321471dd3478, +ERROR:root:FailedDataObject: nmdc:bd81b50efc9801e87950afa8240656b5, +ERROR:root:failing_data_objects: 16 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c109f562fa430f15ed86ca54470596e4, Annotation Activity for nmdc:mga0aa1m26 +INFO:root:record: nmdc:064295f6128ea28b2b946d2fe7eaf438, Annotation Activity for nmdc:mga0mgyv87 +INFO:root:PassingDataObject: nmdc:0740a34c36c80b33dc3551a6b00a03b7 +INFO:root:PassingDataObject: nmdc:fe065106bd11d2670cf1098470559b0e +INFO:root:PassingDataObject: nmdc:d9299c578140b47df517f8be2fcdfb88 +INFO:root:PassingDataObject: nmdc:ad5bf5b067768603a7fd905cc2a02ee4 +INFO:root:PassingDataObject: nmdc:a29f3c60d48de86a1020b45eaf574c10 +INFO:root:PassingDataObject: nmdc:765a8e6346794ff536b53ee933b0aee7 +INFO:root:PassingDataObject: nmdc:22041c6d6fda0a9ff7e807591c604506 +INFO:root:PassingDataObject: nmdc:a58379f14272bd991b108bb35ed91615 +INFO:root:PassingDataObject: nmdc:2974436c1e8b33cda6e3b5c0975e4ac7 +INFO:root:PassingDataObject: nmdc:ea4f339bb0d9dd210e36a6ce6573c835 +INFO:root:PassingDataObject: nmdc:9e3715a9988393f623472f13beabe7a1 +INFO:root:PassingDataObject: nmdc:ca074416ac29a8e10cce6f036e3bf808 +INFO:root:PassingDataObject: nmdc:1820ac3f5d9a0a4cd7b02b45a0cbfd49 +INFO:root:PassingDataObject: nmdc:e0e34792107473dfdb4967035de0ca86 +INFO:root:PassingDataObject: nmdc:abc87581b4c035a1a5d8205a3aecb35e +INFO:root:PassingDataObject: nmdc:9e0ba37cc7085a4d98134f0fe3b19e72 +INFO:root:PassingDataObject: nmdc:416d12a1dd6e24cc51f9ba66201cc4ab +INFO:root:PassingDataObject: nmdc:e41558464134e2546e43bd96ce2fdb9c +INFO:root:PassingDataObject: nmdc:29de0784761282b3a5c6f2884b933c21 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:064295f6128ea28b2b946d2fe7eaf438 +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:064295f6128ea28b2b946d2fe7eaf438, Annotation Activity for nmdc:mga0mgyv87 +INFO:root:record: nmdc:087ef193fc4b6cc2918b818bb4b67d31, Annotation Activity for nmdc:mga0qa7y25 +INFO:root:PassingDataObject: nmdc:f2f20afbf3fcd093a66412a780b97972 +INFO:root:PassingDataObject: nmdc:65d7bdba0507f4116a727b563c0dc21e +INFO:root:PassingDataObject: nmdc:a550257bf5269eeeb76023d1a152547f +INFO:root:PassingDataObject: nmdc:e9b8afa5d5d1832215230696f0db3e11 +INFO:root:PassingDataObject: nmdc:9c921382c61325151b88fcbdbb84fc11 +INFO:root:PassingDataObject: nmdc:a7c9e1bd8519c12cfa73c10888dec266 +INFO:root:PassingDataObject: nmdc:b5f1a9b58bb2403c5a7d13e69e74a504 +INFO:root:PassingDataObject: nmdc:f02c13dc7edc18f6141b24a9093a0643 +INFO:root:PassingDataObject: nmdc:015519cb78979adee7ab903f6ea0c248 +INFO:root:PassingDataObject: nmdc:b8f1ad85a8f4f26145f4dcfe82151275 +INFO:root:PassingDataObject: nmdc:acd4db1a9427aaa70d97bb4e585895c6 +INFO:root:PassingDataObject: nmdc:5b31055d1abbaac3770d390b7f2b344d +INFO:root:PassingDataObject: nmdc:b440142f13bf054eeb219d24bd58911f +INFO:root:PassingDataObject: nmdc:9d95ed8fd9752e04ea8a6a67f7ec5146 +INFO:root:PassingDataObject: nmdc:23e6fcac949db2531c765efdb3fbf629 +INFO:root:PassingDataObject: nmdc:5204fd93ac65c7d03ad5bd8cf3c1d1bc +INFO:root:PassingDataObject: nmdc:d9b2931e62668e89d244c3776310119c +INFO:root:PassingDataObject: nmdc:518836c7c74d2bdea5b2d223316d5a95 +INFO:root:PassingDataObject: nmdc:055d4e64bb6c8d5201fc0b7ebdd668b6 +INFO:root:PassingDataObject: nmdc:850a99d211c891b3a9591850e844c355 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:087ef193fc4b6cc2918b818bb4b67d31 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:087ef193fc4b6cc2918b818bb4b67d31, Annotation Activity for nmdc:mga0qa7y25 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 3 +INFO:root:set_name: mags_activity_set for gold:Gp0452660 +INFO:root:found 3 records +INFO:root:record: nmdc:064295f6128ea28b2b946d2fe7eaf438, MAGs Analysis Activity for nmdc:mga0mgyv87 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:064295f6128ea28b2b946d2fe7eaf438 +ERROR:root:FailedDataObject: nmdc:c90d7f4c5d7c7ef305221056072a1861, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:064295f6128ea28b2b946d2fe7eaf438, MAGs Analysis Activity for nmdc:mga0mgyv87 +INFO:root:record: nmdc:c109f562fa430f15ed86ca54470596e4, MAGs Analysis Activity for nmdc:mga0aa1m26 +INFO:root:PassingDataObject: nmdc:cf7336817976962e8c487625da22ca42 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:c109f562fa430f15ed86ca54470596e4 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c109f562fa430f15ed86ca54470596e4, MAGs Analysis Activity for nmdc:mga0aa1m26 +INFO:root:record: nmdc:087ef193fc4b6cc2918b818bb4b67d31, MAGs Analysis Activity for nmdc:mga0qa7y25 +INFO:root:PassingDataObject: nmdc:1dd6f4da00585325ed0e9d779105cdb7 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:087ef193fc4b6cc2918b818bb4b67d31 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:087ef193fc4b6cc2918b818bb4b67d31, MAGs Analysis Activity for nmdc:mga0qa7y25 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452660 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-8qhsnz20 +INFO:root:legacy_id: gold:Gp0452656 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-8qhsnz20 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:75dcf9d116582a7e92e8d95347a7a73f +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f21ba1c731410dc24f1252f3fccd3186 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c982daea65ec4312edfbe78fc4d0c2b7 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452656 +INFO:root:found 3 records +INFO:root:record: nmdc:71d1b568d9817ecb0f4fad539124cbbc, Read QC Activity for nmdc:mga097v059 +INFO:root:PassingDataObject: nmdc:9372d0d1ab1f49e93c6d1ad33a5389c3 +INFO:root:PassingDataObject: nmdc:1c7855fa367e823ea572695cc9aa3a0e +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:7d720347e9a04e8eb5bbe2b52e288b05, Read QC Activity for nmdc:mga02nv905 +INFO:root:PassingDataObject: nmdc:ac25eb3b209a812c48d254eb4210dea2 +INFO:root:PassingDataObject: nmdc:87b6740e8f562ed20c8f283e90fab6a4 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:eb06b33353341bd4b04f035f885646a7, Read QC Activity for nmdc:mga0ywny23 +INFO:root:PassingDataObject: nmdc:d1cec3686820ef51db5995d3e71a818b +INFO:root:PassingDataObject: nmdc:0d55f50bcf5ec68db41770d2a48ba584 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452656 +INFO:root:found 3 records +INFO:root:record: nmdc:7d720347e9a04e8eb5bbe2b52e288b05, ReadBased Analysis Activity for nmdc:mga02nv905 +INFO:root:PassingDataObject: nmdc:79d953377a03fa5726aa8b4119a0057e +INFO:root:PassingDataObject: nmdc:08340a1dfabaa0c69d169bc0bf1adb88 +INFO:root:PassingDataObject: nmdc:59bfdbe5b4a4999ed67c2f3ba62dca88 +INFO:root:PassingDataObject: nmdc:312c2b328e94860350c80a466be8e18e +INFO:root:PassingDataObject: nmdc:1ec0e7479275dbff0d178a592fcd4774 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:7d720347e9a04e8eb5bbe2b52e288b05 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:7d720347e9a04e8eb5bbe2b52e288b05 +ERROR:root:FailedDataObject: nmdc:07ec20c9fb56554a907c6acf35b360f8, +ERROR:root:FailedDataObject: nmdc:b6c773cb59c7e87da33404d69b32cf6c, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7d720347e9a04e8eb5bbe2b52e288b05, ReadBased Analysis Activity for nmdc:mga02nv905 +INFO:root:record: nmdc:eb06b33353341bd4b04f035f885646a7, ReadBased Analysis Activity for nmdc:mga0ywny23 +INFO:root:PassingDataObject: nmdc:f335aae17f1e1f3a9d7f8056c5056fcc +INFO:root:PassingDataObject: nmdc:6f392f6855199d83c321dd425b8e60b6 +INFO:root:PassingDataObject: nmdc:a5474f4c549ca3274b5a78a2e2a0a456 +INFO:root:PassingDataObject: nmdc:caaea882e75f892d77fe25230ccac117 +INFO:root:PassingDataObject: nmdc:33e1f7088f31429bbcd9a658f51e6a12 +INFO:root:PassingDataObject: nmdc:399143bb99560ff3c46040d75612cbaa +INFO:root:PassingDataObject: nmdc:66ae506f159f8e1615ed06ff9dba9d81 +INFO:root:PassingDataObject: nmdc:f3ed890224a11f6b46b3c7ba1f8f3d99 +INFO:root:PassingDataObject: nmdc:803d434d5cfe4749cc5eff950b3371c4 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:71d1b568d9817ecb0f4fad539124cbbc, ReadBased Analysis Activity for nmdc:mga097v059 +INFO:root:PassingDataObject: nmdc:87ee9f0c6120b4697ffe9916ed77fcc9 +INFO:root:PassingDataObject: nmdc:0525fb27cd7b9e4a6a7c16c41b355afc +INFO:root:PassingDataObject: nmdc:2219543cadf629d7fd74ddc7949dc99f +INFO:root:PassingDataObject: nmdc:7f88569668d4e434e9d84be598b5fc0a +INFO:root:PassingDataObject: nmdc:3a999518275f2474542068b46adab54a +INFO:root:PassingDataObject: nmdc:85320e7972aecaaa6089695477bdfe1d +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:71d1b568d9817ecb0f4fad539124cbbc +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:71d1b568d9817ecb0f4fad539124cbbc +ERROR:root:FailedDataObject: nmdc:e9ac961df2aeed8dba2ebbc60965bcc8, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:71d1b568d9817ecb0f4fad539124cbbc, ReadBased Analysis Activity for nmdc:mga097v059 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452656 +INFO:root:found 3 records +INFO:root:record: nmdc:71d1b568d9817ecb0f4fad539124cbbc, Assembly Activity for nmdc:mga097v059 +INFO:root:PassingDataObject: nmdc:ed2f23e20ee7854c62bc507ed51240bc +INFO:root:PassingDataObject: nmdc:82a7dcf6c060c03a0ac21a5dda8d1472 +INFO:root:PassingDataObject: nmdc:d21c3b95519501d5ae659210fc286fbf +INFO:root:PassingDataObject: nmdc:a52a25c9a4aaca624851aaded6be4e48 +INFO:root:PassingDataObject: nmdc:f9b24b6369757cb08d272cbfad5d357d +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:7d720347e9a04e8eb5bbe2b52e288b05, Assembly Activity for nmdc:mga02nv905 +INFO:root:PassingDataObject: nmdc:061c76dea963c51a2e6c2d96dc80b96c +INFO:root:PassingDataObject: nmdc:9f6b8c5b6625c9522d5db99152883946 +INFO:root:PassingDataObject: nmdc:2c99437f2adea035027ab5a8674bd9c8 +INFO:root:PassingDataObject: nmdc:bfd35349a19ca48f2d9c570fc3ae5a8d +INFO:root:PassingDataObject: nmdc:b6046d9d5ca23e9184337d7789c5cf15 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:eb06b33353341bd4b04f035f885646a7, Assembly Activity for nmdc:mga0ywny23 +INFO:root:PassingDataObject: nmdc:4d037fa73003660c824ce8a6669ae8a5 +INFO:root:PassingDataObject: nmdc:c938e5a1df0aed0dc94123fe0a8b2925 +INFO:root:PassingDataObject: nmdc:b647a706dd7bc0c8c9d2bb1ce7a56a8a +INFO:root:PassingDataObject: nmdc:cd97095049965a7e418c1246b999c9bc +INFO:root:PassingDataObject: nmdc:75a9575a28511c1f6c6f77c9c3ed272c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452656 +INFO:root:found 3 records +INFO:root:record: nmdc:71d1b568d9817ecb0f4fad539124cbbc, Annotation Activity for nmdc:mga097v059 +INFO:root:PassingDataObject: nmdc:bacae9697a2745cb28a5b5f4e0403484 +INFO:root:PassingDataObject: nmdc:df4da5c489483639385e3729ab23a0c2 +INFO:root:PassingDataObject: nmdc:ed2d32d13e1ee723fe1b5789a2e6ade1 +INFO:root:PassingDataObject: nmdc:a7eebce3ce13be2c9f280472d7ce5b97 +INFO:root:PassingDataObject: nmdc:532579ff3be4e7990c34e88755e15c6b +INFO:root:PassingDataObject: nmdc:0b463fb93da2c46b660b5fa31bc1a59b +INFO:root:PassingDataObject: nmdc:6d5d4e240814759af83b951c4cf7e2a6 +INFO:root:PassingDataObject: nmdc:8d47757175d06485440fdbe236cb68eb +INFO:root:PassingDataObject: nmdc:51bfadb238857159ba16de5dcd254914 +INFO:root:PassingDataObject: nmdc:fea95b95d7e6daa1081908aea712e04f +INFO:root:PassingDataObject: nmdc:cc6cc72057c8ae95d75538829b1daf55 +INFO:root:PassingDataObject: nmdc:b1c99c8f09d822d18e208cfe868ca9d8 +INFO:root:PassingDataObject: nmdc:3ed175957f409bc62bb40929ecbf1c96 +INFO:root:PassingDataObject: nmdc:a5dcc4dc6f99c2314b0581f03bce1e82 +INFO:root:PassingDataObject: nmdc:902e4f30ceeae4f065d8006554d60b21 +INFO:root:PassingDataObject: nmdc:a0e77c9bcc80e29a2863be19959a8a20 +INFO:root:PassingDataObject: nmdc:2d289ad6bca949efccaf3321ac2c8c4d +INFO:root:PassingDataObject: nmdc:92d9163c15781bcbd405069e5b104c93 +INFO:root:PassingDataObject: nmdc:928841e91b0b5b36a338b2f60c8166c8 +INFO:root:PassingDataObject: nmdc:e80083ece45413cedf8fddb89d6c23ea +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:71d1b568d9817ecb0f4fad539124cbbc +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:71d1b568d9817ecb0f4fad539124cbbc, Annotation Activity for nmdc:mga097v059 +INFO:root:record: nmdc:eb06b33353341bd4b04f035f885646a7, Annotation Activity for nmdc:mga0ywny23 +INFO:root:PassingDataObject: nmdc:a5fa56dd8eaae2d0a7c29327faa2419b +INFO:root:PassingDataObject: nmdc:cb13651c43a4f0aa57b15a201945f8c1 +INFO:root:PassingDataObject: nmdc:e442de107de2ea639659f6e76a82a593 +INFO:root:PassingDataObject: nmdc:302942ed749cf736c753814e498408ca +INFO:root:PassingDataObject: nmdc:6eab38ebc2c7290588ecfd91aa11d5d6 +INFO:root:PassingDataObject: nmdc:75be9e63387b1c27df29a1803b3fd2f8 +INFO:root:PassingDataObject: nmdc:4d84a4968a98800e92d380852b1dfbe9 +INFO:root:PassingDataObject: nmdc:b37094ffc6f9e419c7c49f62cb34d28f +INFO:root:PassingDataObject: nmdc:8480ab8b3410e26e74aa3faf1afa3720 +INFO:root:PassingDataObject: nmdc:243e8fd7c46b5af8d03ef2eaf62ab26e +INFO:root:PassingDataObject: nmdc:72ec7b50295593c5eeb210c54c30ea96 +INFO:root:PassingDataObject: nmdc:6da8335d6f5eaed89ca2d75d2ba0cd15 +INFO:root:PassingDataObject: nmdc:400ab4f1c9bb12e93e1031760229b163 +INFO:root:PassingDataObject: nmdc:6a86aaf6dcd0b0280a67b53c1e318cee +INFO:root:PassingDataObject: nmdc:6d458275506fdaeacee82bdc7cb8ea1e +INFO:root:PassingDataObject: nmdc:c0b991dccfa0fb7028ad4a4d85547040 +INFO:root:PassingDataObject: nmdc:1f42e2e15ad2d42da0fa3a34c9931e5c +INFO:root:PassingDataObject: nmdc:6c33d73dc1d438d22683e2791284d2ca +INFO:root:PassingDataObject: nmdc:12e5106dc63c60a67044b8ff3d9db9fd +INFO:root:PassingDataObject: nmdc:d6cd6d7623eba535ce446b993e2ab18d +INFO:root:PassingDataObject: nmdc:59150810630269dc110cf502c6145a13 +INFO:root:PassingDataObject: nmdc:eaee90170c6c7b26ae44997808f5bdbe +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:7d720347e9a04e8eb5bbe2b52e288b05, Annotation Activity for nmdc:mga02nv905 +INFO:root:PassingDataObject: nmdc:8edf30388087c05f95c99cd286c18621 +INFO:root:PassingDataObject: nmdc:ae04c60a089c7b782c7a77e96912b04c +INFO:root:PassingDataObject: nmdc:de91b66c96e53302821ff73e4feb9781 +INFO:root:PassingDataObject: nmdc:6285e950df85ff67ac089ed60a1ed6c4 +INFO:root:PassingDataObject: nmdc:311b00f35c063c09b4688feb3e20041e +INFO:root:PassingDataObject: nmdc:964c58144e928d676f7e106727d4af6d +INFO:root:PassingDataObject: nmdc:da23522041330b5801c9ee1348b919d5 +INFO:root:PassingDataObject: nmdc:db7a6f555ff80670362e62b7cbf33e89 +INFO:root:PassingDataObject: nmdc:646d2cf7746998c627f4590d9a97d93c +INFO:root:PassingDataObject: nmdc:c30bbe242167ebd528931d3409748756 +INFO:root:PassingDataObject: nmdc:6549d9d8037ecda6b22172f69c5df947 +INFO:root:PassingDataObject: nmdc:272a7419982751c736b69ed2967bdc0a +INFO:root:PassingDataObject: nmdc:c8e28e1b0382ef073d005af02dbc2f75 +INFO:root:PassingDataObject: nmdc:09c66701221c5abf32a93681ce931070 +INFO:root:PassingDataObject: nmdc:934e193427faa1e771c72846da33b5c7 +INFO:root:PassingDataObject: nmdc:9117775f69e681e1ee26394e6f1b640f +INFO:root:PassingDataObject: nmdc:982d848500dfd62eaaa66a291eb2c47a +INFO:root:PassingDataObject: nmdc:99e196bf9dcabccc2545350d2e1cab1f +INFO:root:PassingDataObject: nmdc:c2f769f2306b5df016a7611c8fbd8c99 +INFO:root:PassingDataObject: nmdc:3a90a7a5efc0b4c615443b98b9821a44 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:7d720347e9a04e8eb5bbe2b52e288b05 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7d720347e9a04e8eb5bbe2b52e288b05, Annotation Activity for nmdc:mga02nv905 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452656 +INFO:root:found 3 records +INFO:root:record: nmdc:71d1b568d9817ecb0f4fad539124cbbc, MAGs Analysis Activity for nmdc:mga097v059 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:71d1b568d9817ecb0f4fad539124cbbc +ERROR:root:FailedDataObject: nmdc:f5dc351d0ddf8e758cfa6deacadf686a, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:71d1b568d9817ecb0f4fad539124cbbc, MAGs Analysis Activity for nmdc:mga097v059 +INFO:root:record: nmdc:7d720347e9a04e8eb5bbe2b52e288b05, MAGs Analysis Activity for nmdc:mga02nv905 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:7d720347e9a04e8eb5bbe2b52e288b05 +ERROR:root:FailedDataObject: nmdc:3950eb8c2eb7e4a6dddf381fbb4e9ef9, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7d720347e9a04e8eb5bbe2b52e288b05, MAGs Analysis Activity for nmdc:mga02nv905 +INFO:root:record: nmdc:eb06b33353341bd4b04f035f885646a7, MAGs Analysis Activity for nmdc:mga0ywny23 +INFO:root:PassingDataObject: nmdc:464b7f0fdcc4287daa1553be09122528 +INFO:root:PassingDataObject: nmdc:2f1ad28fab8fb757708705ab6cd022f7 +INFO:root:passing_data_objects: 2 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452656 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-gnbmya80 +INFO:root:legacy_id: gold:Gp0452549 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gnbmya80 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:699fdaff83eb61376ce31874f293520a +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f9d125a53b5061b2bce4d35f4f9b64df +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:e8dacf3ab60971af1764c95189a02c2f +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7dd1bb93a4fa98aa687a33c9a9311e95 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452549 +INFO:root:found 4 records +INFO:root:record: nmdc:451f8e2729c3146b5a81eafedc3b6519, Read QC Activity for nmdc:mga0m77924 +INFO:root:PassingDataObject: nmdc:b21089cdd35b0872666081fdbccba18e +INFO:root:PassingDataObject: nmdc:b97d774ebc00b0a1df0430a7e17c22df +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:732105719c84f5c3f83413dd7a3414b7, Read QC Activity for nmdc:mga0dy6a87 +INFO:root:PassingDataObject: nmdc:baff4a985be952a734fd0e2397a5cc70 +INFO:root:PassingDataObject: nmdc:d7dbeaa029a2551233d58fb34ba05b4f +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:08f80d16e8408d02f7e478c23c4802c9, Read QC Activity for nmdc:mga0026t90 +INFO:root:PassingDataObject: nmdc:fd47d9fde8313dcafc8ab51a027fe9ea +INFO:root:PassingDataObject: nmdc:b1bb062854ff831c2eb170256df640a9 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:7725c6cecf9539901597c6de3dc927ea, Read QC Activity for nmdc:mga0wfrq08 +INFO:root:PassingDataObject: nmdc:64170b3b1a709e81d22055c2f165943c +INFO:root:PassingDataObject: nmdc:be2349b8cee8badf6597d8edfe6e48a1 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452549 +INFO:root:found 4 records +INFO:root:record: nmdc:451f8e2729c3146b5a81eafedc3b6519, ReadBased Analysis Activity for nmdc:mga0m77924 +INFO:root:PassingDataObject: nmdc:c1e3653333f302a46c242924edff2789 +INFO:root:PassingDataObject: nmdc:631a43f9d2ce3372d4e08538cde1d99e +INFO:root:PassingDataObject: nmdc:24297ac740e69945cfdbde621cc1b0bd +INFO:root:PassingDataObject: nmdc:33451bb9f09be92b0f5370e879979ba7 +INFO:root:PassingDataObject: nmdc:a751f6a6ae1cf4942268737a96a04e9f +INFO:root:PassingDataObject: nmdc:2ab9ee60742d5d68ce596f17b2b75019 +INFO:root:PassingDataObject: nmdc:271e5260588370dfe462533dbbf6dad4 +INFO:root:PassingDataObject: nmdc:26bc20c51f56b65521fd7eb813eb6108 +INFO:root:PassingDataObject: nmdc:7fdbb7814b41e6c7bbe86e847e0b5ac0 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:7725c6cecf9539901597c6de3dc927ea, ReadBased Analysis Activity for nmdc:mga0wfrq08 +INFO:root:PassingDataObject: nmdc:e899662d51959addb1ef203dd950a19d +INFO:root:PassingDataObject: nmdc:4c9115e8a937da4ecf257856985f39a6 +INFO:root:PassingDataObject: nmdc:4c9c33f614961e0d9219f5e1fb0ce7e3 +INFO:root:PassingDataObject: nmdc:5131e5d7581e7b76dacd9609b3ced518 +INFO:root:PassingDataObject: nmdc:c4bbf34c768c76f64d1ba3e7690e4259 +INFO:root:PassingDataObject: nmdc:b6c4364aa4458c2530ec4988b16c2305 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:7725c6cecf9539901597c6de3dc927ea +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:7725c6cecf9539901597c6de3dc927ea +ERROR:root:FailedDataObject: nmdc:063adcb9041cba1497e5ba46b7231700, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7725c6cecf9539901597c6de3dc927ea, ReadBased Analysis Activity for nmdc:mga0wfrq08 +INFO:root:record: nmdc:732105719c84f5c3f83413dd7a3414b7, ReadBased Analysis Activity for nmdc:mga0dy6a87 +INFO:root:PassingDataObject: nmdc:3b2b7cfeeba348396bfef0618aa04008 +INFO:root:PassingDataObject: nmdc:4267770a04068851c98b7190bb6b5337 +INFO:root:PassingDataObject: nmdc:09eb1af0ddbaaa2c0174445d9290950a +INFO:root:PassingDataObject: nmdc:a36586e2554fb7e740f15936d2923fc7 +INFO:root:PassingDataObject: nmdc:94ddc7c2997475607fbe1445f81c7add +INFO:root:PassingDataObject: nmdc:91dd416472081c2563c414ff4e7d06f5 +INFO:root:PassingDataObject: nmdc:1b757c6461a7f831399be56aceda391c +INFO:root:PassingDataObject: nmdc:55cbed467916f96bf8352d2f71259163 +INFO:root:PassingDataObject: nmdc:2911be7d9ea006bf527b2d497ef5b9b3 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:08f80d16e8408d02f7e478c23c4802c9, ReadBased Analysis Activity for nmdc:mga0026t90 +INFO:root:PassingDataObject: nmdc:1d4ea56feb5d416d49eedd7b58cf85b5 +INFO:root:PassingDataObject: nmdc:d8f69b7f92e2d6109029a183bc6c734a +INFO:root:PassingDataObject: nmdc:4b4bea091e6e4960af674a7ec54865e0 +INFO:root:PassingDataObject: nmdc:a63c2174d48ef368b98eee286f1fbc52 +INFO:root:PassingDataObject: nmdc:61e75e037b376742fa0c075a8bfce759 +INFO:root:PassingDataObject: nmdc:e0a787ba90db76cdb230ccd733b66e7f +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:08f80d16e8408d02f7e478c23c4802c9 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:08f80d16e8408d02f7e478c23c4802c9 +ERROR:root:FailedDataObject: nmdc:e299a7a31df586aa1d32bc6e00a7f5f3, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:08f80d16e8408d02f7e478c23c4802c9, ReadBased Analysis Activity for nmdc:mga0026t90 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452549 +INFO:root:found 4 records +INFO:root:record: nmdc:7725c6cecf9539901597c6de3dc927ea, Assembly Activity for nmdc:mga0wfrq08 +INFO:root:PassingDataObject: nmdc:dddf63cf715eea716c15d9a76b703b73 +INFO:root:PassingDataObject: nmdc:b9abef0d1dc82e35812b131b4eff524f +INFO:root:PassingDataObject: nmdc:9d90cec387cbaf7493b7352f08063a75 +INFO:root:PassingDataObject: nmdc:d2329549692adab04c19a6a40bbd7fbb +INFO:root:PassingDataObject: nmdc:3ec8441c48474521c181cd140338d0ea +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:732105719c84f5c3f83413dd7a3414b7, Assembly Activity for nmdc:mga0dy6a87 +INFO:root:PassingDataObject: nmdc:630caa1915c184d3efc023303ff4c4bb +INFO:root:PassingDataObject: nmdc:fcb034f4ea1d852e65ef5dfaac850721 +INFO:root:PassingDataObject: nmdc:3c28f32488711b95a2c6387cb434dd47 +INFO:root:PassingDataObject: nmdc:8a1d63ff571ae7d9c859e1039e229a62 +INFO:root:PassingDataObject: nmdc:d7dd83802a4d89e6d4c52f390c9ed7ba +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:451f8e2729c3146b5a81eafedc3b6519, Assembly Activity for nmdc:mga0m77924 +INFO:root:PassingDataObject: nmdc:24f269e667189cd74ea820d570438226 +INFO:root:PassingDataObject: nmdc:7801a4059a47859de11abd580c536e90 +INFO:root:PassingDataObject: nmdc:3bdb81306622da16cabd4f8cc4f4708f +INFO:root:PassingDataObject: nmdc:a9be1e390b6a3adcf2a31be9dc88c4eb +INFO:root:PassingDataObject: nmdc:88db61cd7401d105f97fdf01782cc0ef +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:08f80d16e8408d02f7e478c23c4802c9, Assembly Activity for nmdc:mga0026t90 +INFO:root:PassingDataObject: nmdc:5f8b9cf9c7a95e35af1130b21cfb4218 +INFO:root:PassingDataObject: nmdc:ae2c87f954547299dbc66232f45181fc +INFO:root:PassingDataObject: nmdc:b22628aa10c65cf730c096ff1c22e24d +INFO:root:PassingDataObject: nmdc:46c40ab1535175f121438308bc58990e +INFO:root:PassingDataObject: nmdc:c1d12ca5ef883acb14cda9fbba555c76 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452549 +INFO:root:found 4 records +INFO:root:record: nmdc:7725c6cecf9539901597c6de3dc927ea, Annotation Activity for nmdc:mga0wfrq08 +INFO:root:PassingDataObject: nmdc:33a8ab0924f9c8f3aa084cbb14e8ad1a +INFO:root:PassingDataObject: nmdc:378660b417bddc88ee699ab59e143b98 +INFO:root:PassingDataObject: nmdc:a03b03d9890226c2e36e841f49780a5e +INFO:root:PassingDataObject: nmdc:bfcbc2c78da67570a62be9928fd15349 +INFO:root:PassingDataObject: nmdc:8bd7511e5af802592c54d6215f1a0af6 +INFO:root:PassingDataObject: nmdc:04580f568e9b7dcd61028c6bd8694530 +INFO:root:PassingDataObject: nmdc:9fe1e715f75ca1a00f6ccd5e405be96e +INFO:root:PassingDataObject: nmdc:d4e2538be51f8695f29cd825c096c41b +INFO:root:PassingDataObject: nmdc:dcc0825f54f6b08480ef2e374e632927 +INFO:root:PassingDataObject: nmdc:b385a0cc44043b7b18384246def86494 +INFO:root:PassingDataObject: nmdc:c919ca0c8ac05ea433cb1603ada18605 +INFO:root:PassingDataObject: nmdc:afe8af0a420849533becc79d394c273c +INFO:root:PassingDataObject: nmdc:2080be73ef3160bed3a1228619a8c8c4 +INFO:root:PassingDataObject: nmdc:6ca9ef6bc8ec35db3fda55aacf89d92c +INFO:root:PassingDataObject: nmdc:2fc82a2e2254311921116d80dbfa5c83 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:7725c6cecf9539901597c6de3dc927ea +ERROR:root:FailedDataObject: nmdc:b7edb375b8c4ea638582a131f44922b2, +ERROR:root:FailedDataObject: nmdc:26361d02847303c95ba61220a8b7e1ba, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7725c6cecf9539901597c6de3dc927ea, Annotation Activity for nmdc:mga0wfrq08 +INFO:root:record: nmdc:08f80d16e8408d02f7e478c23c4802c9, Annotation Activity for nmdc:mga0026t90 +INFO:root:PassingDataObject: nmdc:e03e593ee5ff32e97370e80a4412e584 +INFO:root:PassingDataObject: nmdc:b73ef3c4f7d41a63d4d2d0072f5a5016 +INFO:root:PassingDataObject: nmdc:f4fa50abe0d515984a57779631136e2f +INFO:root:PassingDataObject: nmdc:1d193b70a494562145b1c61a4f9b5ee5 +INFO:root:PassingDataObject: nmdc:8c8b9cd657567bd2a721152f41f9ced1 +INFO:root:PassingDataObject: nmdc:b1238739f99fcd07a653f2bf026ffee5 +INFO:root:PassingDataObject: nmdc:bd787432c6f44ea5ad4f56ddb8e8b79d +INFO:root:PassingDataObject: nmdc:66e6e79b38774d8a3862e5301ed4d12b +INFO:root:PassingDataObject: nmdc:b7a8b9c50c046fa84e61b2483c74d448 +INFO:root:PassingDataObject: nmdc:754cdc449963fe27ceaf1ef2e8d8280a +INFO:root:PassingDataObject: nmdc:c9da44e636250e1ccd426f77c4f516e3 +INFO:root:PassingDataObject: nmdc:8e03ae4d56ce1b66a1a5cda889ab195d +INFO:root:PassingDataObject: nmdc:8deabb141103d9bc1ff3f5d989005f89 +INFO:root:PassingDataObject: nmdc:d4d3719b162a3dd10bf624ec0b925e08 +INFO:root:PassingDataObject: nmdc:37a76ebeefc7a2d83fe811e619f91d89 +INFO:root:PassingDataObject: nmdc:06897baefa2118810a0a22f41d0d1754 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:08f80d16e8408d02f7e478c23c4802c9 +ERROR:root:FailedDataObject: nmdc:2957eaedb7801a43fd2673b6b04338e5, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:08f80d16e8408d02f7e478c23c4802c9, Annotation Activity for nmdc:mga0026t90 +INFO:root:record: nmdc:732105719c84f5c3f83413dd7a3414b7, Annotation Activity for nmdc:mga0dy6a87 +INFO:root:PassingDataObject: nmdc:2791eae6b30d768e0cf207463c884998 +INFO:root:PassingDataObject: nmdc:84ffa92ce122d0eb517b26d0d2e81ee8 +INFO:root:PassingDataObject: nmdc:63167c12a7c79c08deca59558925e063 +INFO:root:PassingDataObject: nmdc:21cd5b9b9b40f2d5c988846f04ecf94c +INFO:root:PassingDataObject: nmdc:15808aed32acd2d6735800c78de5352f +INFO:root:PassingDataObject: nmdc:482fd9a58e5cbf0a61be670071c36fbe +INFO:root:PassingDataObject: nmdc:889435b446da91c82ac1b72795e76b76 +INFO:root:PassingDataObject: nmdc:4c0cde32b6dfc4b6059d85ea8c4db405 +INFO:root:PassingDataObject: nmdc:19680bfefbf5249d1d7d516861b70b18 +INFO:root:PassingDataObject: nmdc:159a8219646a1acc288ff642a2900aca +INFO:root:PassingDataObject: nmdc:a1424b734117625058c3706bd4883df7 +INFO:root:PassingDataObject: nmdc:a0b84e90248a389f11424e944df0137b +INFO:root:PassingDataObject: nmdc:84c25d0f0efa6a65e7ee81e57e123be1 +INFO:root:PassingDataObject: nmdc:d88096d50e853caf9da36655fa0f3fb1 +INFO:root:PassingDataObject: nmdc:a099c369bddb1c4e8dd47adfabe4c12a +INFO:root:PassingDataObject: nmdc:09818ca63bd3e9697907718247239e02 +INFO:root:PassingDataObject: nmdc:2b819e9c872d2c888bac38a47c4efe8b +INFO:root:PassingDataObject: nmdc:9bd33d4fa9b0a4974df0261b1c5f03a4 +INFO:root:PassingDataObject: nmdc:4e0d3fa2b32e585c0bdbfe5ae6e151a4 +INFO:root:PassingDataObject: nmdc:fd1bb2fe52e54040b344f79818618ba2 +INFO:root:PassingDataObject: nmdc:357c9f1d19b7e1d8bbaab9eb03f5dd91 +INFO:root:PassingDataObject: nmdc:283b50940c783fca97a427b588ba6c09 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:451f8e2729c3146b5a81eafedc3b6519, Annotation Activity for nmdc:mga0m77924 +INFO:root:PassingDataObject: nmdc:105e651d70b9d2513a007d07d0264214 +INFO:root:PassingDataObject: nmdc:8d0e96a64182669c8ff4c8e33c9b6855 +INFO:root:PassingDataObject: nmdc:380f27a08448fef69bef2190a2b32c75 +INFO:root:PassingDataObject: nmdc:ca99ae7b3df88632dfbd20e9c586ee28 +INFO:root:PassingDataObject: nmdc:53dd0c64da7b98d50380fc8a0c7009e7 +INFO:root:PassingDataObject: nmdc:d9092f2f80cd76f2e3155965cca5f411 +INFO:root:PassingDataObject: nmdc:e4b11c24886dc241e98503f1c28e0361 +INFO:root:PassingDataObject: nmdc:39c0acd088c6ef724095ba93e223e813 +INFO:root:PassingDataObject: nmdc:5b7c6de7f89c03ca5e117f59a81b6e35 +INFO:root:PassingDataObject: nmdc:967bf688ea26acfa7ceaea25e0df8abc +INFO:root:PassingDataObject: nmdc:01b2d4983e67b1ff9f364abdcc8d0d53 +INFO:root:PassingDataObject: nmdc:f35de9e0c85579b2fdd6cb2c6494bb63 +INFO:root:PassingDataObject: nmdc:d9a5a3113fa9d4bf459be1fc86b089c2 +INFO:root:PassingDataObject: nmdc:433bb9af755bb60d6fe9dd7dfd182ba0 +INFO:root:PassingDataObject: nmdc:12d3979f16ab09230741adefd16eb095 +INFO:root:PassingDataObject: nmdc:54418a0422aeb36ee9560ce432e180ad +INFO:root:PassingDataObject: nmdc:0f06bc133a6440d2050b9787fc858caa +INFO:root:PassingDataObject: nmdc:d4a8d6a916e6cd735c94e1de73f8c0e4 +INFO:root:PassingDataObject: nmdc:37b2a953a91e64520e7728788d4df1f1 +INFO:root:PassingDataObject: nmdc:1b6bd749db00255f0ff8897acaf7afc8 +INFO:root:PassingDataObject: nmdc:9a4d5f489dd5a5c8d910d3153e6339c5 +INFO:root:PassingDataObject: nmdc:7db7dca6d48b5d73ff75bdf1e452bb06 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452549 +INFO:root:found 4 records +INFO:root:record: nmdc:451f8e2729c3146b5a81eafedc3b6519, MAGs Analysis Activity for nmdc:mga0m77924 +INFO:root:PassingDataObject: nmdc:ef3fcb8efc179e0666a7e9c7404ed0ba +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:451f8e2729c3146b5a81eafedc3b6519 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:451f8e2729c3146b5a81eafedc3b6519, MAGs Analysis Activity for nmdc:mga0m77924 +INFO:root:record: nmdc:732105719c84f5c3f83413dd7a3414b7, MAGs Analysis Activity for nmdc:mga0dy6a87 +INFO:root:PassingDataObject: nmdc:47ae64709984b4e9681ef6ff65c155a7 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:732105719c84f5c3f83413dd7a3414b7 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:732105719c84f5c3f83413dd7a3414b7, MAGs Analysis Activity for nmdc:mga0dy6a87 +INFO:root:record: nmdc:7725c6cecf9539901597c6de3dc927ea, MAGs Analysis Activity for nmdc:mga0wfrq08 +INFO:root:PassingDataObject: nmdc:8455830fa56849bd3b3043a9e4be0686 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:7725c6cecf9539901597c6de3dc927ea +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7725c6cecf9539901597c6de3dc927ea, MAGs Analysis Activity for nmdc:mga0wfrq08 +INFO:root:record: nmdc:08f80d16e8408d02f7e478c23c4802c9, MAGs Analysis Activity for nmdc:mga0026t90 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:08f80d16e8408d02f7e478c23c4802c9 +ERROR:root:FailedDataObject: nmdc:b79bfedfc51643ff2053ce5856503883, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:08f80d16e8408d02f7e478c23c4802c9, MAGs Analysis Activity for nmdc:mga0026t90 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452549 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-azk19n22 +INFO:root:legacy_id: gold:Gp0452721 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-azk19n22 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:18f3ec8f3650cdc2da476eb7b972fa0b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:97e70a9409f26e7809b24c754d103d31 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452721 +INFO:root:found 2 records +INFO:root:record: nmdc:e3014fc8e57026e111e4c4edab3fb641, Read QC Activity for nmdc:mga0jdte15 +INFO:root:PassingDataObject: nmdc:db7131b89f0d07222f133271a0209344 +INFO:root:PassingDataObject: nmdc:f3ac92ed44dcc7d0c7acfab5d2159be0 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:b2b2e7c58c759d0df8602c363dbf3764, Read QC Activity for nmdc:mga0v4z066 +INFO:root:PassingDataObject: nmdc:083fe65e22f828252f9edb0cdb5d412a +INFO:root:PassingDataObject: nmdc:a35785b1b34f0bf73e239c310f6d6392 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452721 +INFO:root:found 2 records +INFO:root:record: nmdc:e3014fc8e57026e111e4c4edab3fb641, ReadBased Analysis Activity for nmdc:mga0jdte15 +INFO:root:PassingDataObject: nmdc:31feef3e45363547290068dc1ceddd5d +INFO:root:PassingDataObject: nmdc:f9b9286a180d1d30692d042cbcacd529 +INFO:root:PassingDataObject: nmdc:3924d713f2680f96381225a4e35991a8 +INFO:root:PassingDataObject: nmdc:e96ed33eb78c511f4ae5eab329128ce1 +INFO:root:PassingDataObject: nmdc:ab8141e8c625ff25c6f148fb07ede1e6 +INFO:root:PassingDataObject: nmdc:37ed8c9c878e78e40f8e64416379b358 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:e3014fc8e57026e111e4c4edab3fb641 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:e3014fc8e57026e111e4c4edab3fb641 +ERROR:root:FailedDataObject: nmdc:d283b8531964b97b93593e0e89b1fae6, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e3014fc8e57026e111e4c4edab3fb641, ReadBased Analysis Activity for nmdc:mga0jdte15 +INFO:root:record: nmdc:b2b2e7c58c759d0df8602c363dbf3764, ReadBased Analysis Activity for nmdc:mga0v4z066 +INFO:root:PassingDataObject: nmdc:91ad3718d59bda8e4e3bc6864148bde7 +INFO:root:PassingDataObject: nmdc:758d1c79d60f1a1e3c435dbdb60df234 +INFO:root:PassingDataObject: nmdc:b6b2d5a36d64898e50bfe85cb5a5dfa2 +INFO:root:PassingDataObject: nmdc:068a6ff6bfffd897bb1491f5a165039b +INFO:root:PassingDataObject: nmdc:feb40152fd6c397b1c4ec542d77232da +INFO:root:PassingDataObject: nmdc:0044e16c313fb9cee7ac7b743ba00530 +INFO:root:PassingDataObject: nmdc:cf94ccd45cc1a620aa6a6b50faeda295 +INFO:root:PassingDataObject: nmdc:3e05c408b005ce8753a41d79bf1bea6f +INFO:root:PassingDataObject: nmdc:4f15e46e02db5d8416d6cf1ea3337150 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452721 +INFO:root:found 2 records +INFO:root:record: nmdc:b2b2e7c58c759d0df8602c363dbf3764, Assembly Activity for nmdc:mga0v4z066 +INFO:root:PassingDataObject: nmdc:594e15cd7d277d47ab5c3024a54ee2e4 +INFO:root:PassingDataObject: nmdc:5e062fed38d0fa487e81feb29ce032af +INFO:root:PassingDataObject: nmdc:acb56283c3f4f83df7258fcaf3919fb4 +INFO:root:PassingDataObject: nmdc:0a29248ea330d477714833b246aa9036 +INFO:root:PassingDataObject: nmdc:5330a80423f1ea2dbb975c1ab1fa56fe +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:e3014fc8e57026e111e4c4edab3fb641, Assembly Activity for nmdc:mga0jdte15 +INFO:root:PassingDataObject: nmdc:77fba65f2ba096cadb6a9263701c094e +INFO:root:PassingDataObject: nmdc:ba8aadc4f2bfb3b2d42b9abec611d602 +INFO:root:PassingDataObject: nmdc:e0303d5971c6ff3a29b8c7a83f7ce773 +INFO:root:PassingDataObject: nmdc:b7d30ec88d1c52efd79028816a5358a1 +INFO:root:PassingDataObject: nmdc:64239f13d2c3630061547d6095f29c5b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452721 +INFO:root:found 2 records +INFO:root:record: nmdc:e3014fc8e57026e111e4c4edab3fb641, Annotation Activity for nmdc:mga0jdte15 +INFO:root:PassingDataObject: nmdc:087c57155b27ee17a760aa63ec297718 +INFO:root:PassingDataObject: nmdc:d0456e05edb84bd3e532ad6ef82742a0 +INFO:root:PassingDataObject: nmdc:f148b19c5e65b1f9cd184d469755b412 +INFO:root:PassingDataObject: nmdc:079d8c7cee5386fb4aad2b3780fd70f8 +INFO:root:PassingDataObject: nmdc:1beed5061fdcb62d5e2b15d0e5e42fb0 +INFO:root:PassingDataObject: nmdc:c26a4e9ea55168aa423552c5b224ef4a +INFO:root:PassingDataObject: nmdc:efce65bd68a775041d3a8818a3948621 +INFO:root:PassingDataObject: nmdc:fc0e3f7ee42b94ef080978ae71f1430b +INFO:root:PassingDataObject: nmdc:3bd26e3e9e447bef27604ed119f7606d +INFO:root:PassingDataObject: nmdc:7c87f8b305662ad831430037549d25a3 +INFO:root:PassingDataObject: nmdc:29a1ab65e8746cb763009460ad0dc470 +INFO:root:PassingDataObject: nmdc:345784c167c290268b0cbec9240b7553 +INFO:root:PassingDataObject: nmdc:ec06b8603f67f2a954d80ceecfaae487 +INFO:root:PassingDataObject: nmdc:ad47aacfb532ca1d3a1035967eec7024 +INFO:root:PassingDataObject: nmdc:51098d74ac0b243902611d2b1b53dd7b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:e3014fc8e57026e111e4c4edab3fb641 +ERROR:root:FailedDataObject: nmdc:f10bc0ea6e2c5fe09abfb7b724a3f7e7, +ERROR:root:FailedDataObject: nmdc:2f9ab47dbfed6afa7ebaacc221db4ff4, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e3014fc8e57026e111e4c4edab3fb641, Annotation Activity for nmdc:mga0jdte15 +INFO:root:record: nmdc:b2b2e7c58c759d0df8602c363dbf3764, Annotation Activity for nmdc:mga0v4z066 +INFO:root:PassingDataObject: nmdc:124f79fe33f6a451806af8aa58d1469e +INFO:root:PassingDataObject: nmdc:3ecd8d5eed04b3a5b3ed59a05df46acc +INFO:root:PassingDataObject: nmdc:fb485e438ce92b2613aba55045d4dc39 +INFO:root:PassingDataObject: nmdc:8d1bacfb02cc8bb2429d7073f94bfa97 +INFO:root:PassingDataObject: nmdc:68d3251a0f6653ac30d48d8a3ecb192c +INFO:root:PassingDataObject: nmdc:5e1406239bad3974ec03614a6ccb8a76 +INFO:root:PassingDataObject: nmdc:2933a5c57baaea4f4d5dff09c3458b8a +INFO:root:PassingDataObject: nmdc:4c94314211b54847aaddd22fa0a552e7 +INFO:root:PassingDataObject: nmdc:4f54f28f2cf6e33361280b9fc0b69482 +INFO:root:PassingDataObject: nmdc:1ad3f84b7d46a27ae787f368170d38cc +INFO:root:PassingDataObject: nmdc:a22726b668a0ce553d42a4f64cbc773b +INFO:root:PassingDataObject: nmdc:c975136558d702f94d46344a3e3128f7 +INFO:root:PassingDataObject: nmdc:b384be7b5ee2e2220cd046ba9e467a0c +INFO:root:PassingDataObject: nmdc:f031336e2fd936eb0c2f73a2e19daf91 +INFO:root:PassingDataObject: nmdc:ab37b5f164696a6626ba8a93eec68dfc +INFO:root:PassingDataObject: nmdc:12be8f5f79549f40b1f1b32b25b1ab6d +INFO:root:PassingDataObject: nmdc:28ac92a1009e478e85927dcdfe8ff7fb +INFO:root:PassingDataObject: nmdc:ed897dbce09da12c12ce5daf245336eb +INFO:root:PassingDataObject: nmdc:03b52826d0e307aad1e685c135f2569d +INFO:root:PassingDataObject: nmdc:cb0a8c5266a96134b3c44521458d6310 +INFO:root:PassingDataObject: nmdc:5dbc881a24958ebd1c95c45a634f979b +INFO:root:PassingDataObject: nmdc:03e95a761427f4bdfa85b177e439a707 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452721 +INFO:root:found 2 records +INFO:root:record: nmdc:e3014fc8e57026e111e4c4edab3fb641, MAGs Analysis Activity for nmdc:mga0jdte15 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e3014fc8e57026e111e4c4edab3fb641 +ERROR:root:FailedDataObject: nmdc:292944fc6923d3d1adbcd069cac02d29, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e3014fc8e57026e111e4c4edab3fb641, MAGs Analysis Activity for nmdc:mga0jdte15 +INFO:root:record: nmdc:b2b2e7c58c759d0df8602c363dbf3764, MAGs Analysis Activity for nmdc:mga0v4z066 +INFO:root:PassingDataObject: nmdc:c742e6e14e442f9faeaee2caa8793e59 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:b2b2e7c58c759d0df8602c363dbf3764 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b2b2e7c58c759d0df8602c363dbf3764, MAGs Analysis Activity for nmdc:mga0v4z066 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452721 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-9wk9qh61 +INFO:root:legacy_id: gold:Gp0452639 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9wk9qh61 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0d535c216e3c681a5376231bb55ede5f +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:05ae2bc57e4ce1f6cb6534c75289af78 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:270dd4cdc5a0558984eb9ae5f6b9c297 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452639 +INFO:root:found 3 records +INFO:root:record: nmdc:7e612a5fc3625809e529af538731a1a9, Read QC Activity for nmdc:mga0k8t048 +INFO:root:PassingDataObject: nmdc:3efa7a3785acf59a146fa3d9be90959e +INFO:root:PassingDataObject: nmdc:2b2523ebeb872a22cdc11450f85aed4f +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:101a13dc5d4028bb940eb79615b2f20d, Read QC Activity for nmdc:mga0vjd496 +INFO:root:PassingDataObject: nmdc:d3e76e16e503c8df8b4e0c8e12e48c51 +INFO:root:PassingDataObject: nmdc:8feec48ae566e063c27ec703823462cc +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:92374cfd64926c5d29f536d81bbdc519, Read QC Activity for nmdc:mga0b1xb41 +INFO:root:PassingDataObject: nmdc:d6c1ae7b9d654ec80a5266d2fc82c86a +INFO:root:PassingDataObject: nmdc:6244538275837ca1f74f1a851ebf599d +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452639 +INFO:root:found 3 records +INFO:root:record: nmdc:101a13dc5d4028bb940eb79615b2f20d, ReadBased Analysis Activity for nmdc:mga0vjd496 +INFO:root:PassingDataObject: nmdc:ef7655eb0d6dd15eebb4405d1a1f4705 +INFO:root:PassingDataObject: nmdc:143f9f11f841a3cf1e3beda1950b1032 +INFO:root:PassingDataObject: nmdc:3febf30ae89f0b746361b531070a894f +INFO:root:PassingDataObject: nmdc:8e14f2cb488f6671be46795bea6bd4f5 +INFO:root:PassingDataObject: nmdc:cf6406c4b1768cb6e3f8a380eb8a00b3 +INFO:root:PassingDataObject: nmdc:93d12570655f80bc3f490f070c42e45f +INFO:root:PassingDataObject: nmdc:911a69d1f6061327e2132680078c2432 +INFO:root:PassingDataObject: nmdc:6d69eb454eb7c8680aac9865f02c797a +INFO:root:PassingDataObject: nmdc:a800e93838486648219e9d32a5ff8efe +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:7e612a5fc3625809e529af538731a1a9, ReadBased Analysis Activity for nmdc:mga0k8t048 +INFO:root:PassingDataObject: nmdc:800869e8812d159f7db6b1dc979edd7b +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:7e612a5fc3625809e529af538731a1a9 +ERROR:root:FailedDataObject: nmdc:af40aa90eb2e7efc6ba66b2c9b7a0dd2, +ERROR:root:FailedDataObject: nmdc:5767aff5f5388d427b8b0fba481703e8, +ERROR:root:FailedDataObject: nmdc:ad2875547ec0273a0f0b1bd13fed5993, +ERROR:root:FailedDataObject: nmdc:ea54b2be27dcad3e6cb3c507017ffe93, +ERROR:root:FailedDataObject: nmdc:4ea35c420017dc206b825ed08c08074c, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:7e612a5fc3625809e529af538731a1a9 +ERROR:root:FailedDataObject: nmdc:ff3ac8f121f9002ec9f3c5499b844246, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7e612a5fc3625809e529af538731a1a9, ReadBased Analysis Activity for nmdc:mga0k8t048 +INFO:root:record: nmdc:92374cfd64926c5d29f536d81bbdc519, ReadBased Analysis Activity for nmdc:mga0b1xb41 +INFO:root:PassingDataObject: nmdc:962a76012d44af19144ae0df83082ca3 +INFO:root:PassingDataObject: nmdc:22fba5080e723555c175fb60ab4189d3 +INFO:root:PassingDataObject: nmdc:332884b0be2c6e82aaf234abfa100d2b +INFO:root:PassingDataObject: nmdc:d7f2b31993abdd317c2bd444283ce810 +INFO:root:PassingDataObject: nmdc:a4b6d104860983344aeb5b17737577da +INFO:root:PassingDataObject: nmdc:1015b68652afd91624195dec75f53ab5 +INFO:root:PassingDataObject: nmdc:fc7ed022c253531c7fa5b39db03c7c7c +INFO:root:PassingDataObject: nmdc:5a8f4dda2ccb7fb01c456de4d142a2ac +INFO:root:PassingDataObject: nmdc:2ab3080d37763d5e517e7c0afb78afaf +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452639 +INFO:root:found 3 records +INFO:root:record: nmdc:101a13dc5d4028bb940eb79615b2f20d, Assembly Activity for nmdc:mga0vjd496 +INFO:root:PassingDataObject: nmdc:5ba363b93acdc04b4b190a97024e240a +INFO:root:PassingDataObject: nmdc:5923dd8549f630e6f9aff0d6313176de +INFO:root:PassingDataObject: nmdc:2dd3501a05fa731e6ceb6af98351bdc9 +INFO:root:PassingDataObject: nmdc:6415d0b91513118b48c1527b440bce49 +INFO:root:PassingDataObject: nmdc:57a3aedfa45c03fd28472478e84e652b +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:7e612a5fc3625809e529af538731a1a9, Assembly Activity for nmdc:mga0k8t048 +INFO:root:PassingDataObject: nmdc:47ea71ee13045f3bfe2c30ad8be676e2 +INFO:root:PassingDataObject: nmdc:307ad920002913ded4abe9826e5f4d7e +INFO:root:PassingDataObject: nmdc:a9b917a5659bcd4dc062712d5f3e48d8 +INFO:root:PassingDataObject: nmdc:fcfc45d5d9e69f06beeae2bc6720b249 +INFO:root:PassingDataObject: nmdc:97fb3d014eba43066b8c49aa68c3cf61 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:92374cfd64926c5d29f536d81bbdc519, Assembly Activity for nmdc:mga0b1xb41 +INFO:root:PassingDataObject: nmdc:55fbd796965813ac16b38e019b170e02 +INFO:root:PassingDataObject: nmdc:66398fbcbcd60d44facab0ebbcdd0a6d +INFO:root:PassingDataObject: nmdc:85f51bf66e8c874fe58d5c086f462ba1 +INFO:root:PassingDataObject: nmdc:38a0e2f16c34e70287e3a0632b261d2c +INFO:root:PassingDataObject: nmdc:c61c54df33ebaee21662960458e202a7 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452639 +INFO:root:found 3 records +INFO:root:record: nmdc:7e612a5fc3625809e529af538731a1a9, Annotation Activity for nmdc:mga0k8t048 +INFO:root:PassingDataObject: nmdc:8f6bb0fd5fb0883d05dfd7a1c15a1af6 +INFO:root:PassingDataObject: nmdc:6376506e462f3b1fcec2969056b78088 +INFO:root:PassingDataObject: nmdc:18d9ee9e1fdc1d885dcb9fd611c29c43 +INFO:root:PassingDataObject: nmdc:79bdc9e65a74d00439ee011d541573bd +INFO:root:PassingDataObject: nmdc:3b53029eb32accbb4567f5a02778b0b8 +INFO:root:PassingDataObject: nmdc:07b736c677bc88af68683d0fad8e801f +INFO:root:PassingDataObject: nmdc:622b78c03a7cfa3f82a7ec1231556025 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:7e612a5fc3625809e529af538731a1a9 +ERROR:root:FailedDataObject: nmdc:a7fea1a675b784821153dfa750cc9794, +ERROR:root:failing_data_objects: 8 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7e612a5fc3625809e529af538731a1a9, Annotation Activity for nmdc:mga0k8t048 +INFO:root:record: nmdc:101a13dc5d4028bb940eb79615b2f20d, Annotation Activity for nmdc:mga0vjd496 +INFO:root:PassingDataObject: nmdc:ecdb41f5cc226e7d3228216c4c357780 +INFO:root:PassingDataObject: nmdc:88c1270b436bdc8bf83451683bd0166e +INFO:root:PassingDataObject: nmdc:2ad33a0b840de97fcf03f5859b01faae +INFO:root:PassingDataObject: nmdc:2ab5c38dc6e558724e918dadc05fff87 +INFO:root:PassingDataObject: nmdc:4c7feb6de564c15f37aeeb78463a7bb4 +INFO:root:PassingDataObject: nmdc:dbf66fce45b25795891edbeebd481540 +INFO:root:PassingDataObject: nmdc:95a29df267544c1f8bd38f493b0125cc +INFO:root:PassingDataObject: nmdc:93f6930de3dd26fa8d7c1b015ef8bb63 +INFO:root:PassingDataObject: nmdc:f380deb7ea8dbbb2e1c754fc79d72c96 +INFO:root:PassingDataObject: nmdc:313d41eeb9ae3f19ff8077a779ea2bf9 +INFO:root:PassingDataObject: nmdc:df5dd85c8350fc76853c44a8be5cf7fe +INFO:root:PassingDataObject: nmdc:4baf293704655b44fd4fe28c2640117e +INFO:root:PassingDataObject: nmdc:cb947187b391ece5e578547fce92dc7f +INFO:root:PassingDataObject: nmdc:b1d3e779c77d2d23d37df2ded16ec3a4 +INFO:root:PassingDataObject: nmdc:8b8210623f6f57d3fc6f9a0ea830d232 +INFO:root:PassingDataObject: nmdc:109cbfef65eacf6981d40f92ead07a62 +INFO:root:PassingDataObject: nmdc:458cd61bfe4d1e99a43ac2d773701376 +INFO:root:PassingDataObject: nmdc:f8ea91868fbbf6cc4fda4b0ab3eb6834 +INFO:root:PassingDataObject: nmdc:222cc4b6eec065cc4413b9c20f819741 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:101a13dc5d4028bb940eb79615b2f20d +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:101a13dc5d4028bb940eb79615b2f20d, Annotation Activity for nmdc:mga0vjd496 +INFO:root:record: nmdc:92374cfd64926c5d29f536d81bbdc519, Annotation Activity for nmdc:mga0b1xb41 +INFO:root:PassingDataObject: nmdc:0b6da12ef0ae8978634013a64b4b6784 +INFO:root:PassingDataObject: nmdc:59d106635cac672c7e1e0bc3c270b9b1 +INFO:root:PassingDataObject: nmdc:c132eb3bf0ae2f0414d860fee1fe3dba +INFO:root:PassingDataObject: nmdc:ad4600df12d8c1ffc4f3d9ce34bd8617 +INFO:root:PassingDataObject: nmdc:d92973ad1043dc46a1cafb5021a0b65f +INFO:root:PassingDataObject: nmdc:79dac409ab56dfd9c5d8d51933e15e6a +INFO:root:PassingDataObject: nmdc:92d842f5e6ee09cbfe03f87f1242f9d1 +INFO:root:PassingDataObject: nmdc:751ce9c6856902d41f4ca825c48f945c +INFO:root:PassingDataObject: nmdc:c2e12ae55577ce34f12341f57ab7f5fa +INFO:root:PassingDataObject: nmdc:db8f4d4aa2849160ff44ae22ee16eca6 +INFO:root:PassingDataObject: nmdc:7e44b6015272899813607d1277adeda1 +INFO:root:PassingDataObject: nmdc:485af7cf34a7eae4e15019e26b65c263 +INFO:root:PassingDataObject: nmdc:e4c43646f6396e85bf6213053429f0fc +INFO:root:PassingDataObject: nmdc:da67b01da74a126213f66deef299e434 +INFO:root:PassingDataObject: nmdc:26e05098aa36b4bc661f98a04f2de237 +INFO:root:PassingDataObject: nmdc:f3ede9a4421805dac80335476d49f3e9 +INFO:root:PassingDataObject: nmdc:57c8a6332044770355d872fd8c9bc248 +INFO:root:PassingDataObject: nmdc:ecbe64610a4761baf3338a310a685955 +INFO:root:PassingDataObject: nmdc:85ad59c83c4c15a640263b427a78e37b +INFO:root:PassingDataObject: nmdc:541472b104c5ec52115c322d1b1182d7 +INFO:root:PassingDataObject: nmdc:19475d0616c8dc8e89970a6f7707e2f0 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:92374cfd64926c5d29f536d81bbdc519 +ERROR:root:failing_data_objects: 21 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:92374cfd64926c5d29f536d81bbdc519, Annotation Activity for nmdc:mga0b1xb41 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 3 +INFO:root:set_name: mags_activity_set for gold:Gp0452639 +INFO:root:found 3 records +INFO:root:record: nmdc:7e612a5fc3625809e529af538731a1a9, MAGs Analysis Activity for nmdc:mga0k8t048 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:7e612a5fc3625809e529af538731a1a9 +ERROR:root:FailedDataObject: nmdc:e4b4bcf168449f645d9eb0329e6c408c, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7e612a5fc3625809e529af538731a1a9, MAGs Analysis Activity for nmdc:mga0k8t048 +INFO:root:record: nmdc:92374cfd64926c5d29f536d81bbdc519, MAGs Analysis Activity for nmdc:mga0b1xb41 +INFO:root:PassingDataObject: nmdc:2e5560a1e6164ca1be7a3736e17efa61 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:92374cfd64926c5d29f536d81bbdc519 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:92374cfd64926c5d29f536d81bbdc519, MAGs Analysis Activity for nmdc:mga0b1xb41 +INFO:root:record: nmdc:101a13dc5d4028bb940eb79615b2f20d, MAGs Analysis Activity for nmdc:mga0vjd496 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:101a13dc5d4028bb940eb79615b2f20d +ERROR:root:FailedDataObject: nmdc:cedeb1c32640feb04b78fbce3281dbc5, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:101a13dc5d4028bb940eb79615b2f20d, MAGs Analysis Activity for nmdc:mga0vjd496 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452639 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-3aqzmw69 +INFO:root:legacy_id: gold:Gp0452576 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-3aqzmw69 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b6eba56c97490c4635ab176144b4d192 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:87dd0c207c8d8ed5f2658cd6b61d60ad +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0adf8dc96aa5e36af1c7b810ff99ad02 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452576 +INFO:root:found 3 records +INFO:root:record: nmdc:0f6303a71f2870c09b4234b448c18d39, Read QC Activity for nmdc:mga0xbct10 +INFO:root:PassingDataObject: nmdc:e6efd237f6feb3a6687c42c51dbbb256 +INFO:root:PassingDataObject: nmdc:ad7ab80257c838bc7ce4cfbf6bbf0269 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:1489b6535192e8c1436826a5e48220f3, Read QC Activity for nmdc:mga0xf3886 +INFO:root:PassingDataObject: nmdc:13a3e572f2818a055adc07d7b10ef20e +INFO:root:PassingDataObject: nmdc:2624b5112609a7ebda91f511b5aff981 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:b28927e0d3d78bf25c06adb1473fc5b1, Read QC Activity for nmdc:mga07bpb41 +INFO:root:PassingDataObject: nmdc:03bb1a55f5fe9c4a5b4514f065a27922 +INFO:root:PassingDataObject: nmdc:542e9f76da870bab6670db31b76c7013 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452576 +INFO:root:found 3 records +INFO:root:record: nmdc:1489b6535192e8c1436826a5e48220f3, ReadBased Analysis Activity for nmdc:mga0xf3886 +INFO:root:PassingDataObject: nmdc:c5a8fee9652bbcb2b427b6bc18e6f0cf +INFO:root:PassingDataObject: nmdc:cf06c9e74d1521e3b3f91d1060a5f7ed +INFO:root:PassingDataObject: nmdc:e4f70994613bdea3766d4bec6a00ef7c +INFO:root:PassingDataObject: nmdc:56cd89bf7d9c630a5825945a691840b2 +INFO:root:PassingDataObject: nmdc:245aa6dbb31a3da369da57df30f055b6 +INFO:root:PassingDataObject: nmdc:40da19a141f742a56ed8bfff9c482cff +INFO:root:PassingDataObject: nmdc:279a7fbe343ccf7e780b56185465c52c +INFO:root:PassingDataObject: nmdc:21f862f387fe2fed58998fbced3d6772 +INFO:root:PassingDataObject: nmdc:335a22eb8f27ada8774308627cbb116e +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:b28927e0d3d78bf25c06adb1473fc5b1, ReadBased Analysis Activity for nmdc:mga07bpb41 +INFO:root:PassingDataObject: nmdc:9083db852d4fd4f295227c86a95e16ff +INFO:root:PassingDataObject: nmdc:d20544e1712bb71a0a175af4c4a4bb8a +INFO:root:PassingDataObject: nmdc:cc41ec7cfba4f2367444c1f5c923abcb +INFO:root:PassingDataObject: nmdc:3305ec687437fff478ebbc7c3231e69d +INFO:root:PassingDataObject: nmdc:ed158f485bcf6da018a8fc265e5d8a22 +INFO:root:PassingDataObject: nmdc:af8aba36084200fec11e52b723436530 +INFO:root:PassingDataObject: nmdc:4a61c995d6b56ddeb99e109303d6da31 +INFO:root:PassingDataObject: nmdc:2034f73be7fde17d510e474b3de9171b +INFO:root:PassingDataObject: nmdc:85273a9bef597d5666e3c405dc2a8e67 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:0f6303a71f2870c09b4234b448c18d39, ReadBased Analysis Activity for nmdc:mga0xbct10 +INFO:root:PassingDataObject: nmdc:8cf837efbac50aec698f6dc0f3ce751d +INFO:root:PassingDataObject: nmdc:2782e9f68cf4fe5fe1bd25a6e9c7655e +INFO:root:PassingDataObject: nmdc:27c5f41151e3699680638db042fa6b8d +INFO:root:PassingDataObject: nmdc:ae4b4d746f46f525ca0db3255b7942e4 +INFO:root:PassingDataObject: nmdc:08a52a70c2ceaa0f9642b11c4785157c +INFO:root:PassingDataObject: nmdc:574275d79f81d6466b45a1775e387e66 +INFO:root:PassingDataObject: nmdc:ad8a7f2d1f18128c6b9314b589a67a4f +INFO:root:PassingDataObject: nmdc:f715f147cb6d8e64aeef3424eb0fc768 +INFO:root:PassingDataObject: nmdc:f7641f2bbe7043c6a5c328d87916d976 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452576 +INFO:root:found 3 records +INFO:root:record: nmdc:0f6303a71f2870c09b4234b448c18d39, Assembly Activity for nmdc:mga0xbct10 +INFO:root:PassingDataObject: nmdc:275da89e3984ed5d2d0869e0bef1bb02 +INFO:root:PassingDataObject: nmdc:864f7a3613b06760c70ae9e57b7a3798 +INFO:root:PassingDataObject: nmdc:db428e3983f42b7c52112019dda11c56 +INFO:root:PassingDataObject: nmdc:ecb43a1ba31c3584cbdea3e5da6dd870 +INFO:root:PassingDataObject: nmdc:48a1b902f29cb707e0bd097761394189 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:b28927e0d3d78bf25c06adb1473fc5b1, Assembly Activity for nmdc:mga07bpb41 +INFO:root:PassingDataObject: nmdc:828ec9cd4a4c7d71089ad45fd21c95a5 +INFO:root:PassingDataObject: nmdc:c92c1d38329e6ac9c39c7af0c5ab5d8e +INFO:root:PassingDataObject: nmdc:807a7b5502b4de1814b7c58f57798d8c +INFO:root:PassingDataObject: nmdc:bb75af766e68cd58f0d6da75874f9a21 +INFO:root:PassingDataObject: nmdc:4ea2b11cfb5297d5ab7c8004f70ff7b1 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:1489b6535192e8c1436826a5e48220f3, Assembly Activity for nmdc:mga0xf3886 +INFO:root:PassingDataObject: nmdc:9b42b3545be72b7323b478bdfa12a90c +INFO:root:PassingDataObject: nmdc:6bb33521d2cd0eb6c6737adfd521e3f8 +INFO:root:PassingDataObject: nmdc:253a7e2648b555f92ce22c7eeeaef005 +INFO:root:PassingDataObject: nmdc:442758ade42947b30aae50e3dc56798c +INFO:root:PassingDataObject: nmdc:5a9a9cd555f734ac722f1f42c782e66e +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452576 +INFO:root:found 3 records +INFO:root:record: nmdc:0f6303a71f2870c09b4234b448c18d39, Annotation Activity for nmdc:mga0xbct10 +INFO:root:PassingDataObject: nmdc:1fe2a3b87e42a63b3af02917d0336941 +INFO:root:PassingDataObject: nmdc:5862f5b59605163a86ffc76f4ee20ed7 +INFO:root:PassingDataObject: nmdc:0c98e4af26184810deb7b8fa9adc6a09 +INFO:root:PassingDataObject: nmdc:36e91629e9fbc84f2f1c05cdc0dbcb79 +INFO:root:PassingDataObject: nmdc:3b9edf6e9148ba1acda1dec02c14b59e +INFO:root:PassingDataObject: nmdc:478d40c3890dbe38d71478036e73167d +INFO:root:PassingDataObject: nmdc:7169a24d4f1937780ad56b2e3f5398aa +INFO:root:PassingDataObject: nmdc:9481ab0fae4065918920b93debc1e0c5 +INFO:root:PassingDataObject: nmdc:7a5c03c5ba1cb27e75dd89a15fbdf303 +INFO:root:PassingDataObject: nmdc:31dddc3d0213758371e2f68b4af53988 +INFO:root:PassingDataObject: nmdc:d2573a92cd696b5a00b4ceacf679f326 +INFO:root:PassingDataObject: nmdc:da1b26f4918bf04e6fa6926992531471 +INFO:root:PassingDataObject: nmdc:306df535289dc12c08798f6ca0d67d9d +INFO:root:PassingDataObject: nmdc:418a1375e82aa5eb345f152648347dff +INFO:root:PassingDataObject: nmdc:38f28c87be7d51bb8af09a144bfd905f +INFO:root:PassingDataObject: nmdc:75f649aa512fbef7ff928ec5b22f22a3 +INFO:root:PassingDataObject: nmdc:af02cb56f4d5d0950df8ac5932b9f7da +INFO:root:PassingDataObject: nmdc:0087110b3d70adf95abbe24fa9892d9f +INFO:root:PassingDataObject: nmdc:19609bd2104d4975bc4f046751fa8dcc +INFO:root:PassingDataObject: nmdc:78b9904fd47f5a364acc9aa6fe191b55 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:0f6303a71f2870c09b4234b448c18d39 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0f6303a71f2870c09b4234b448c18d39, Annotation Activity for nmdc:mga0xbct10 +INFO:root:record: nmdc:b28927e0d3d78bf25c06adb1473fc5b1, Annotation Activity for nmdc:mga07bpb41 +INFO:root:PassingDataObject: nmdc:effaa76ee1c6e38302d9edb56176f305 +INFO:root:PassingDataObject: nmdc:abd8e89dcdc6d4bbbe27669789bd8e63 +INFO:root:PassingDataObject: nmdc:3a6b82d1311371add8a8e0ffa5563f2a +INFO:root:PassingDataObject: nmdc:40d762dbd1562cddc9f48390a81a38e4 +INFO:root:PassingDataObject: nmdc:8b551b2f0043640870187d2ec2f1165c +INFO:root:PassingDataObject: nmdc:4aac313d1af12d3d301db40f860be227 +INFO:root:PassingDataObject: nmdc:b936678afde8ae92fb9ff899044938a7 +INFO:root:PassingDataObject: nmdc:81d1ac0807758d781d76be3d911bea2f +INFO:root:PassingDataObject: nmdc:d4fd8c880daa218825df39cd212c7e7d +INFO:root:PassingDataObject: nmdc:d2db7d34909d1f34098302320d0ae398 +INFO:root:PassingDataObject: nmdc:71ec13aaabae3561dbfb93f3866bbf71 +INFO:root:PassingDataObject: nmdc:0571b0558ae6aefedd0813ca813cee8a +INFO:root:PassingDataObject: nmdc:8c60d2fcf8cf1817681d06554fa9d5fc +INFO:root:PassingDataObject: nmdc:c5af68c9efe69ed044d55b7cd6238df4 +INFO:root:PassingDataObject: nmdc:9c6e10bde96054b9f96fbd228dbf0ef4 +INFO:root:PassingDataObject: nmdc:cb62f05cbe2fd9a2ec5dcb6e69654c95 +INFO:root:PassingDataObject: nmdc:be6faccaa45ca8a99abd747cda9430dd +INFO:root:PassingDataObject: nmdc:e326befcb59a0b872319dc7338150823 +INFO:root:PassingDataObject: nmdc:694e0ac62f1fd1b9023185b66d853684 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:b28927e0d3d78bf25c06adb1473fc5b1 +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b28927e0d3d78bf25c06adb1473fc5b1, Annotation Activity for nmdc:mga07bpb41 +INFO:root:record: nmdc:1489b6535192e8c1436826a5e48220f3, Annotation Activity for nmdc:mga0xf3886 +INFO:root:PassingDataObject: nmdc:4a02fe66256888bddcd673b981341019 +INFO:root:PassingDataObject: nmdc:8777face0b161578b148f36e440cca19 +INFO:root:PassingDataObject: nmdc:a21d89bccddf0d41f3796c43f5496702 +INFO:root:PassingDataObject: nmdc:3d2a7d45f0e55f0cf48f0cc6a526eaa8 +INFO:root:PassingDataObject: nmdc:fdcaafb9262170b375f84b7cf99d01a4 +INFO:root:PassingDataObject: nmdc:542ea6ea5cfe98207874405e4d3a5db8 +INFO:root:PassingDataObject: nmdc:55a825ab9e1f44dbd4dd0bb389640938 +INFO:root:PassingDataObject: nmdc:55db97dbe475c40a757e836879eb638b +INFO:root:PassingDataObject: nmdc:c484562a490309d354fbd526871be9a2 +INFO:root:PassingDataObject: nmdc:e4457c0bac84534ae8cc2ec5c738158d +INFO:root:PassingDataObject: nmdc:0c73333fada531b190169aca6225ac37 +INFO:root:PassingDataObject: nmdc:f9c8039eeb16eb6d72e379f19f713940 +INFO:root:PassingDataObject: nmdc:560a613a7297cbd616ec56fe17d73ade +INFO:root:PassingDataObject: nmdc:928296883c0e47a03841080e849155b8 +INFO:root:PassingDataObject: nmdc:1a8067b9a5f50b7395dc5ded7905320e +INFO:root:PassingDataObject: nmdc:33d497f4dab4aec6a77874f56549bd41 +INFO:root:PassingDataObject: nmdc:a2d759b9b033ac546be5771d61816075 +INFO:root:PassingDataObject: nmdc:dc06b2da860e1c46f6a345258ee6b3b4 +INFO:root:PassingDataObject: nmdc:2496ab49cad61e8bf1cd1975c208027e +INFO:root:PassingDataObject: nmdc:7680acd84702c535a9e977b86782ce8a +INFO:root:PassingDataObject: nmdc:77285d4f847ee69a2f8d4287acd9eac5 +INFO:root:PassingDataObject: nmdc:d6923428bbfa6e391785af6388f95cba +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452576 +INFO:root:found 3 records +INFO:root:record: nmdc:0f6303a71f2870c09b4234b448c18d39, MAGs Analysis Activity for nmdc:mga0xbct10 +INFO:root:PassingDataObject: nmdc:9677f6b4d5ae0105865eca643403ef31 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0f6303a71f2870c09b4234b448c18d39 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0f6303a71f2870c09b4234b448c18d39, MAGs Analysis Activity for nmdc:mga0xbct10 +INFO:root:record: nmdc:b28927e0d3d78bf25c06adb1473fc5b1, MAGs Analysis Activity for nmdc:mga07bpb41 +INFO:root:PassingDataObject: nmdc:ea239658d4ef0d0d0684c3696b30864e +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:b28927e0d3d78bf25c06adb1473fc5b1 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b28927e0d3d78bf25c06adb1473fc5b1, MAGs Analysis Activity for nmdc:mga07bpb41 +INFO:root:record: nmdc:1489b6535192e8c1436826a5e48220f3, MAGs Analysis Activity for nmdc:mga0xf3886 +INFO:root:PassingDataObject: nmdc:23e88b19bdd72580a9f73bcc66202320 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1489b6535192e8c1436826a5e48220f3 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1489b6535192e8c1436826a5e48220f3, MAGs Analysis Activity for nmdc:mga0xf3886 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452576 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-g1xssd06 +INFO:root:legacy_id: gold:Gp0452643 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-g1xssd06 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:3460f87b757fe516157825b517e016e6 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:75f7ed2a23d976355c20b8e396adc239 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:80d2bde77171d449e1125fb8729985d8 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9560cccc7abf1a94b133be722e57151c +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452643 +INFO:root:found 4 records +INFO:root:record: nmdc:2945bf56e7bf26be95a8d9ebc7b20802, Read QC Activity for nmdc:mga0p6fq66 +INFO:root:PassingDataObject: nmdc:0848ed0e795b2c6dd57f17ba18ff626e +INFO:root:PassingDataObject: nmdc:3fd9020ec4dc424850914cca8cf634f5 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:475d21f02c1695c8baf1910f2e77b756, Read QC Activity for nmdc:mga09pck79 +INFO:root:PassingDataObject: nmdc:a4e98230227273c6effb0e558cabe860 +INFO:root:PassingDataObject: nmdc:b4cab9eb3edca30509473ca8055d0f2d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:b2d31989b87bd1c3debfc313643e6d5b, Read QC Activity for nmdc:mga0pt6669 +INFO:root:PassingDataObject: nmdc:b9d51a77035adf8f2d0843a5d9b3bcaf +INFO:root:PassingDataObject: nmdc:65d99ff9b2a644aea513e38b5702a49d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:35eda01e9d60cdfa570a3594218ca53d, Read QC Activity for nmdc:mga065kt38 +INFO:root:PassingDataObject: nmdc:91cf0344107e6d285f6d4fa6fa43e33c +INFO:root:PassingDataObject: nmdc:bb5b0cc3cf0605ad363f31f7abd8d2f9 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452643 +INFO:root:found 4 records +INFO:root:record: nmdc:475d21f02c1695c8baf1910f2e77b756, ReadBased Analysis Activity for nmdc:mga09pck79 +INFO:root:PassingDataObject: nmdc:f23c08c72ee917df85f110b9a217a878 +INFO:root:PassingDataObject: nmdc:d55c11bb6ac1bbf91199deb9c14242cb +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:475d21f02c1695c8baf1910f2e77b756 +ERROR:root:FailedDataObject: nmdc:1b7e6a02f471bb9e7c248e5877b9a4f5, +ERROR:root:FailedDataObject: nmdc:0a7848e63d05725daccaa77dcd3d900b, +ERROR:root:FailedDataObject: nmdc:318108fedb70818364aad8eac317cff8, +ERROR:root:FailedDataObject: nmdc:6803fe1c52e6cb8c16d7b52c6f6eafcb, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:475d21f02c1695c8baf1910f2e77b756 +ERROR:root:FailedDataObject: nmdc:71d649dd87fb9c0ec7965d560663a99f, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:475d21f02c1695c8baf1910f2e77b756, ReadBased Analysis Activity for nmdc:mga09pck79 +INFO:root:record: nmdc:2945bf56e7bf26be95a8d9ebc7b20802, ReadBased Analysis Activity for nmdc:mga0p6fq66 +INFO:root:PassingDataObject: nmdc:f620fdf498e3e4ca866d0f116072a9ef +INFO:root:PassingDataObject: nmdc:f9c9c87f39ae2affba7bdbc73a688fe1 +INFO:root:PassingDataObject: nmdc:8e81232f411f8951104a74086e8aa2fc +INFO:root:PassingDataObject: nmdc:8e8878db832cec31dde1678326910a65 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:2945bf56e7bf26be95a8d9ebc7b20802 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:2945bf56e7bf26be95a8d9ebc7b20802 +ERROR:root:FailedDataObject: nmdc:6c8eee97a06446060eaee0634bc41638, +ERROR:root:FailedDataObject: nmdc:468749f82d583b9b55a19050c75a54e6, +ERROR:root:FailedDataObject: nmdc:f55ffe94635c822e1f3db9811a819701, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2945bf56e7bf26be95a8d9ebc7b20802, ReadBased Analysis Activity for nmdc:mga0p6fq66 +INFO:root:record: nmdc:b2d31989b87bd1c3debfc313643e6d5b, ReadBased Analysis Activity for nmdc:mga0pt6669 +INFO:root:PassingDataObject: nmdc:edbbe2fded497ae6aefc64bffe3afe52 +INFO:root:PassingDataObject: nmdc:48659fe5a38cfefbde1a9921e1ad31d4 +INFO:root:PassingDataObject: nmdc:77e44ca9c7b40e49fb8468b7e9a314c2 +INFO:root:PassingDataObject: nmdc:20929c8b9df87b207800712aab8e290c +INFO:root:PassingDataObject: nmdc:f3b9ef340881377a59b604ccd0143ece +INFO:root:PassingDataObject: nmdc:f8871ecda703c23d04d3c5acacc058e4 +INFO:root:PassingDataObject: nmdc:b29fc94cb250d161fe984565951f84bd +INFO:root:PassingDataObject: nmdc:296f24828a17de2ebe5f20aba01ee872 +INFO:root:PassingDataObject: nmdc:4b7003700fad75ed8ccd2d0cb6653588 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:35eda01e9d60cdfa570a3594218ca53d, ReadBased Analysis Activity for nmdc:mga065kt38 +INFO:root:PassingDataObject: nmdc:87bd794dee2fb3f5d95e83025c6fe933 +INFO:root:PassingDataObject: nmdc:66c32dd5bf05a4c0b3117a25c0986c4f +INFO:root:PassingDataObject: nmdc:347edcbc5780adea951e9f1b0f8cf586 +INFO:root:PassingDataObject: nmdc:93276ff036d0eae750bf59d92a123c02 +INFO:root:PassingDataObject: nmdc:d0d754a71be76562788c0bedc049b71a +INFO:root:PassingDataObject: nmdc:9f55db66b206fc795df920bc848c909c +INFO:root:PassingDataObject: nmdc:98f544c0914fd2c62e0a63f231791e46 +INFO:root:PassingDataObject: nmdc:a8416527f46fdf5bdc6f7c46c04a91b2 +INFO:root:PassingDataObject: nmdc:cc1a268a9e73194e4b15f83b6970e899 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452643 +INFO:root:found 4 records +INFO:root:record: nmdc:475d21f02c1695c8baf1910f2e77b756, Assembly Activity for nmdc:mga09pck79 +INFO:root:PassingDataObject: nmdc:5f5e6aaf3524683ebb21826e80dbad7d +INFO:root:PassingDataObject: nmdc:adef976afd70322f00e2f6547aa36982 +INFO:root:PassingDataObject: nmdc:7caba88f1d672465055c72f24b01e746 +INFO:root:PassingDataObject: nmdc:732734d606a9d49864c79b39fa332cfa +INFO:root:PassingDataObject: nmdc:294749995e0183c95d0d86aa1d5fe7e5 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:b2d31989b87bd1c3debfc313643e6d5b, Assembly Activity for nmdc:mga0pt6669 +INFO:root:PassingDataObject: nmdc:e0b765e1b5427c3bcd2a72c2ac99fb33 +INFO:root:PassingDataObject: nmdc:edb110857b8543d4b4a842772220c8fb +INFO:root:PassingDataObject: nmdc:87dd1e87f6c5b08fd50808d56219021d +INFO:root:PassingDataObject: nmdc:23cc5d7ed5376d3209c8e0e7aea09456 +INFO:root:PassingDataObject: nmdc:fc0f24e873448354d3794da81ae7830f +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:2945bf56e7bf26be95a8d9ebc7b20802, Assembly Activity for nmdc:mga0p6fq66 +INFO:root:PassingDataObject: nmdc:721b812ac64e27f9666d7417dba99fac +INFO:root:PassingDataObject: nmdc:5014670af5cade4a7413d8183487d32a +INFO:root:PassingDataObject: nmdc:5bdb890f5bc5ba5dd7b06e209c17fb86 +INFO:root:PassingDataObject: nmdc:0775583d0bfcdf72c46895fbe83a8285 +INFO:root:PassingDataObject: nmdc:709ea41a8ce6c579f35b97a037ff376b +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:35eda01e9d60cdfa570a3594218ca53d, Assembly Activity for nmdc:mga065kt38 +INFO:root:PassingDataObject: nmdc:dcf66c8ac29c98abb8057a2f4f417144 +INFO:root:PassingDataObject: nmdc:83aabca59c9c1df4e10ca69c69c255d4 +INFO:root:PassingDataObject: nmdc:e5538e7d7a9a0d32d14edc749d214be8 +INFO:root:PassingDataObject: nmdc:409c472f33c9c2146a328c5c9226ef85 +INFO:root:PassingDataObject: nmdc:31bf39a6bfc4fd87aafa2a8e9d8a801b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452643 +INFO:root:found 4 records +INFO:root:record: nmdc:b2d31989b87bd1c3debfc313643e6d5b, Annotation Activity for nmdc:mga0pt6669 +INFO:root:PassingDataObject: nmdc:9e4c9b8e384c30473250713bdfd6c4b6 +INFO:root:PassingDataObject: nmdc:951ac5024368fb9d084012b4cb90c838 +INFO:root:PassingDataObject: nmdc:0b9e483f03947278dfa8caea1bf5ac4c +INFO:root:PassingDataObject: nmdc:d5252b77bb2d75081a04c203390db103 +INFO:root:PassingDataObject: nmdc:16191130ace08c2ad559d5e7a6a971e4 +INFO:root:PassingDataObject: nmdc:90c9a4e19bdfda7f5e5f814e568e3fa6 +INFO:root:PassingDataObject: nmdc:d3bfcea44f7733d91900205b875dab5b +INFO:root:PassingDataObject: nmdc:65ce08174f6b5ebad7b295faae251f57 +INFO:root:PassingDataObject: nmdc:e494a433215f33ff749a3d49e7bba703 +INFO:root:PassingDataObject: nmdc:19e08fcab7a6c128c8007efb6d8fa9e3 +INFO:root:PassingDataObject: nmdc:bde9bae4e4fcafb98f447eaf7beace9e +INFO:root:PassingDataObject: nmdc:4df0182f206bc6839123d3943ff575de +INFO:root:PassingDataObject: nmdc:d7fa03b23035ebf093eedf151c6d0e40 +INFO:root:PassingDataObject: nmdc:a20bb75b2f0976364a95f6f1c70693bc +INFO:root:PassingDataObject: nmdc:44b8615f51f0a0198012cfc764aea0d6 +INFO:root:PassingDataObject: nmdc:aefa1154573fd6b59943e6bce75fb598 +INFO:root:PassingDataObject: nmdc:720a535349529e5b64a4c824b3cc3ba0 +INFO:root:PassingDataObject: nmdc:e6c775134a7cf8643e18c87015066aa0 +INFO:root:PassingDataObject: nmdc:b0e0778da6e1a95314e4541ce9f83b20 +INFO:root:PassingDataObject: nmdc:035b78c429c13c49d6c95a8edcf52aaa +INFO:root:PassingDataObject: nmdc:a941267827d1154c313146c5629497ca +INFO:root:PassingDataObject: nmdc:f020bdf9ec30ddc94ed3ba9c0451215a +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:2945bf56e7bf26be95a8d9ebc7b20802, Annotation Activity for nmdc:mga0p6fq66 +INFO:root:PassingDataObject: nmdc:6a46f2ce9f1200e8b6b4acfb61c47419 +INFO:root:PassingDataObject: nmdc:bd66c0e079e4c50f43891a69d2978232 +INFO:root:PassingDataObject: nmdc:42bd551fe741b922179014fa9824462a +INFO:root:PassingDataObject: nmdc:faa72423601740cef1a17251af4f4f33 +INFO:root:PassingDataObject: nmdc:7eab3389daff01bd181e93f920de563b +INFO:root:PassingDataObject: nmdc:d86d3a35f9e780a9156a90eca40a33c2 +INFO:root:PassingDataObject: nmdc:105fa131aa4cf7ef2e30c19c4e7f8cd5 +INFO:root:PassingDataObject: nmdc:af6f298c00bba1eecdd129b6791c9b85 +INFO:root:PassingDataObject: nmdc:560a57bb8cea8b1a8f93a7002c5e9eba +INFO:root:PassingDataObject: nmdc:3c48e23ce0ee4b29c7cc0982c6f2366d +INFO:root:PassingDataObject: nmdc:db03b00d26a7271ac22e60fbde8eccb7 +INFO:root:PassingDataObject: nmdc:98cf92e994d8430c53c93c89b2356fce +INFO:root:PassingDataObject: nmdc:f1ea13d4b1d766935da194087cac3c6c +INFO:root:PassingDataObject: nmdc:feec354829976330c0724dd76bfe20f2 +INFO:root:PassingDataObject: nmdc:9dff6b21b9bf9be4dd985e877ac02be9 +INFO:root:PassingDataObject: nmdc:7f06c61e8b7044efa32e8af4c6d3f4fe +INFO:root:PassingDataObject: nmdc:e963ec122e4d08f36f2cdf39bf8c4441 +INFO:root:PassingDataObject: nmdc:c0af6ff8e510d7bf1a2718ab526623b9 +INFO:root:PassingDataObject: nmdc:7dd92b528d400997a427e6f35aec1139 +INFO:root:PassingDataObject: nmdc:445ac9200ada91f35002ee91977a7cb4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:2945bf56e7bf26be95a8d9ebc7b20802 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2945bf56e7bf26be95a8d9ebc7b20802, Annotation Activity for nmdc:mga0p6fq66 +INFO:root:record: nmdc:475d21f02c1695c8baf1910f2e77b756, Annotation Activity for nmdc:mga09pck79 +INFO:root:PassingDataObject: nmdc:bc425f3ff69584f3f86d83d3f91297e4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:475d21f02c1695c8baf1910f2e77b756 +ERROR:root:FailedDataObject: nmdc:5dda9dde6af6d1a81774eea1a8730582, +ERROR:root:FailedDataObject: nmdc:c89430de8b51e5f3e565136fed9da503, +ERROR:root:FailedDataObject: nmdc:240aa6af7fc328b24deb542dcddeda67, +ERROR:root:FailedDataObject: nmdc:c01f7b325beaf39afb28a5128bea9ff3, +ERROR:root:FailedDataObject: nmdc:da5df19126cfc4e04c615dad147e8c84, +ERROR:root:FailedDataObject: nmdc:c0dbb277c5df3450674901bed244df6a, +ERROR:root:FailedDataObject: nmdc:fbb4137995d838b60261c32c4e96b178, +ERROR:root:FailedDataObject: nmdc:975ac2e23f94023571d7506c35d704e2, +ERROR:root:FailedDataObject: nmdc:8a1c55d603453d7c9037026a9999d80b, +ERROR:root:FailedDataObject: nmdc:5ea56dcbf454dc45346d58ef5c9920b2, +ERROR:root:FailedDataObject: nmdc:f43addb570c7cf5149e18c045940a2d0, +ERROR:root:FailedDataObject: nmdc:25366919712700a9ebf5f9fc5ed99faa, +ERROR:root:FailedDataObject: nmdc:6f2b50cf5772ec2a8f33ff569fa39a61, +ERROR:root:FailedDataObject: nmdc:300c67c4d93ffab0f46ebb230f0405a2, +ERROR:root:FailedDataObject: nmdc:393bb6ae63b4261b4595a9d7d454dfc9, +ERROR:root:FailedDataObject: nmdc:8fce573640a4558419436c16cda53070, +ERROR:root:FailedDataObject: nmdc:9e16eaf2f18c02d55a6605f1fc4610d3, +ERROR:root:FailedDataObject: nmdc:5fbdde0574188121710c567a4fd360f5, +ERROR:root:FailedDataObject: nmdc:5640454a150894b00f2425faf4f1c513, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:475d21f02c1695c8baf1910f2e77b756, Annotation Activity for nmdc:mga09pck79 +INFO:root:record: nmdc:35eda01e9d60cdfa570a3594218ca53d, Annotation Activity for nmdc:mga065kt38 +INFO:root:PassingDataObject: nmdc:540681cc8dbec53974877ff84b144a6c +INFO:root:PassingDataObject: nmdc:4cc3ecc4ad1d37f73c94202f7e199974 +INFO:root:PassingDataObject: nmdc:25b809334fca364a0f9ef9b7e7d2ec7b +INFO:root:PassingDataObject: nmdc:1ba28493347086ac4d6f8d5c9da29321 +INFO:root:PassingDataObject: nmdc:3807de32dc480e28a6a21d12c997038b +INFO:root:PassingDataObject: nmdc:67ab7650cd97701bf7db382f37b163c1 +INFO:root:PassingDataObject: nmdc:bee9262c1835b9a004d595117e86474d +INFO:root:PassingDataObject: nmdc:1197ee5b49629f380505ce94bf398525 +INFO:root:PassingDataObject: nmdc:d8e764cacae6d9522e5b8b1d481f6b76 +INFO:root:PassingDataObject: nmdc:9985835ed76ce4060cbafe23ab88529b +INFO:root:PassingDataObject: nmdc:dceeb4154608c9a2e3f4ffc43fd265fa +INFO:root:PassingDataObject: nmdc:82ad1dee83662fa459b272357fb9822d +INFO:root:PassingDataObject: nmdc:6f8e42e223799639a872f29f34a4fceb +INFO:root:PassingDataObject: nmdc:a91d0315cb84e1dbeb16fdbeca68cfd0 +INFO:root:PassingDataObject: nmdc:f661eada1288088436aca92f96cb796f +INFO:root:PassingDataObject: nmdc:a3a8e3aba1a012667011a3c80fa8569a +INFO:root:PassingDataObject: nmdc:96fbbede244faff0b2531fa70f857f85 +INFO:root:PassingDataObject: nmdc:6a2943c0d6bc376e584d464e289fd5be +INFO:root:PassingDataObject: nmdc:64e72d85fe9d8994d3aadcdab78cf22f +INFO:root:PassingDataObject: nmdc:7f011d3c24802849a6065e20769f931e +INFO:root:PassingDataObject: nmdc:a4e20ae82cc933c694cf787ca8d6fb89 +INFO:root:PassingDataObject: nmdc:1517fa1713629ebb248b2f303bcd1805 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452643 +INFO:root:found 4 records +INFO:root:record: nmdc:b2d31989b87bd1c3debfc313643e6d5b, MAGs Analysis Activity for nmdc:mga0pt6669 +INFO:root:PassingDataObject: nmdc:f876ccb5eeebcae54ef75e5bd39625f0 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:b2d31989b87bd1c3debfc313643e6d5b +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b2d31989b87bd1c3debfc313643e6d5b, MAGs Analysis Activity for nmdc:mga0pt6669 +INFO:root:record: nmdc:2945bf56e7bf26be95a8d9ebc7b20802, MAGs Analysis Activity for nmdc:mga0p6fq66 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2945bf56e7bf26be95a8d9ebc7b20802 +ERROR:root:FailedDataObject: nmdc:427fdb4e0131c092cc98a236d41f4944, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2945bf56e7bf26be95a8d9ebc7b20802, MAGs Analysis Activity for nmdc:mga0p6fq66 +INFO:root:record: nmdc:475d21f02c1695c8baf1910f2e77b756, MAGs Analysis Activity for nmdc:mga09pck79 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:475d21f02c1695c8baf1910f2e77b756 +ERROR:root:FailedDataObject: nmdc:6fe677ae4e3c5ddcb1d29c1e317974bb, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:475d21f02c1695c8baf1910f2e77b756, MAGs Analysis Activity for nmdc:mga09pck79 +INFO:root:record: nmdc:35eda01e9d60cdfa570a3594218ca53d, MAGs Analysis Activity for nmdc:mga065kt38 +INFO:root:PassingDataObject: nmdc:87d5f6dd0b14959966b6bad194ffbc4f +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:35eda01e9d60cdfa570a3594218ca53d +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:35eda01e9d60cdfa570a3594218ca53d, MAGs Analysis Activity for nmdc:mga065kt38 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452643 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-q8cv8x70 +INFO:root:legacy_id: gold:Gp0452675 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-q8cv8x70 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6fe4620750017a3441428f8805da3c81 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ae7f21822eb47b7b01df31150e7be51b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:87fa3aaec1733a56efd2982ce9d36c6f +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:19d11265104616f154c805501c82eac0 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452675 +INFO:root:found 4 records +INFO:root:record: nmdc:de4b20197db8df3a05f5c8c7709adcdd, Read QC Activity for nmdc:mga05y7365 +INFO:root:PassingDataObject: nmdc:7b692e4122eb5d4d15d9dca854c685ea +INFO:root:PassingDataObject: nmdc:e1b485260e56c057fb8c59a8c5351aa1 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:43271febc6321aab1c1f4caa6c5b310c, Read QC Activity for nmdc:mga09wq921 +INFO:root:PassingDataObject: nmdc:e7da59d9f27ad5844999086441837109 +INFO:root:PassingDataObject: nmdc:1028fe88550b11d084f0d958de76ce2a +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:6e7fec2de31124c92fe30d04613d7846, Read QC Activity for nmdc:mga01dqc70 +INFO:root:PassingDataObject: nmdc:467da7b55263a736458fa95e170e2a18 +INFO:root:PassingDataObject: nmdc:f42b27563ae6effd8c29d9f2f43996ab +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:5def6a10a78144e90bd72e61e60e3fe1, Read QC Activity for nmdc:mga07t1c12 +INFO:root:PassingDataObject: nmdc:8b427bf41fa006f08adc7d284e03e29c +INFO:root:PassingDataObject: nmdc:c85fdc880d16a8684e050a556dad7399 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452675 +INFO:root:found 4 records +INFO:root:record: nmdc:de4b20197db8df3a05f5c8c7709adcdd, ReadBased Analysis Activity for nmdc:mga05y7365 +INFO:root:PassingDataObject: nmdc:70f5b091a064d54b5ee9556963bc7a49 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:de4b20197db8df3a05f5c8c7709adcdd +ERROR:root:FailedDataObject: nmdc:9cd513190afd3f79175f59514a9aff9f, +ERROR:root:FailedDataObject: nmdc:74a3104328e24b05b05749f4b1a7dd19, +ERROR:root:FailedDataObject: nmdc:a77477ddfb4e193f9f06b0f9fa5ccef3, +ERROR:root:FailedDataObject: nmdc:52323b2ad5a703d551822a6ad02cb3d6, +ERROR:root:FailedDataObject: nmdc:7f413cacc244d98eb04b906ec319a8a6, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:de4b20197db8df3a05f5c8c7709adcdd +ERROR:root:FailedDataObject: nmdc:a943b1b14b2835292bee395a8091e8b4, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:de4b20197db8df3a05f5c8c7709adcdd, ReadBased Analysis Activity for nmdc:mga05y7365 +INFO:root:record: nmdc:6e7fec2de31124c92fe30d04613d7846, ReadBased Analysis Activity for nmdc:mga01dqc70 +INFO:root:PassingDataObject: nmdc:af55353a8aec71ac95dc73c2e65ad358 +INFO:root:PassingDataObject: nmdc:1bfdc23b8711d7ce998525a3c80a486b +INFO:root:PassingDataObject: nmdc:b2dd3a94b14c54507b4bf8d268c45b3b +INFO:root:PassingDataObject: nmdc:2c7d00365abe7270ce1fbe8de248cee6 +INFO:root:PassingDataObject: nmdc:64d3e7f2cae32953fd2d3d79fc5ae523 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:6e7fec2de31124c92fe30d04613d7846 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:6e7fec2de31124c92fe30d04613d7846 +ERROR:root:FailedDataObject: nmdc:37f6edb81f701855b62dfe88ab2066a1, +ERROR:root:FailedDataObject: nmdc:7823e76d4aa7c901b55dd29201cf7758, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:6e7fec2de31124c92fe30d04613d7846, ReadBased Analysis Activity for nmdc:mga01dqc70 +INFO:root:record: nmdc:5def6a10a78144e90bd72e61e60e3fe1, ReadBased Analysis Activity for nmdc:mga07t1c12 +INFO:root:PassingDataObject: nmdc:7f7ebc6953a1248db6de8c0343553ef3 +INFO:root:PassingDataObject: nmdc:1c4ffb8a3f50685b2df560d755a09f5c +INFO:root:PassingDataObject: nmdc:5804c4d209e77989dcef1f78fadfee38 +INFO:root:PassingDataObject: nmdc:2ab8d7eecf026e27d5e8d034df843dc4 +INFO:root:PassingDataObject: nmdc:1dc064cb91351a089c7e70b8c0c5150d +INFO:root:PassingDataObject: nmdc:1000cc2bf29b9ec1e00431c4a233de3a +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:5def6a10a78144e90bd72e61e60e3fe1 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:5def6a10a78144e90bd72e61e60e3fe1 +ERROR:root:FailedDataObject: nmdc:86601df3fcd84861e8d8874df8f01f61, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5def6a10a78144e90bd72e61e60e3fe1, ReadBased Analysis Activity for nmdc:mga07t1c12 +INFO:root:record: nmdc:43271febc6321aab1c1f4caa6c5b310c, ReadBased Analysis Activity for nmdc:mga09wq921 +INFO:root:PassingDataObject: nmdc:fa5e6bf18283f550b1e937639ef64c23 +INFO:root:PassingDataObject: nmdc:2398f3d8e367506cab05b5365184bbee +INFO:root:PassingDataObject: nmdc:63cf0ce571cce2190ba9c2fa0459c531 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:43271febc6321aab1c1f4caa6c5b310c +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:43271febc6321aab1c1f4caa6c5b310c +ERROR:root:FailedDataObject: nmdc:c80b53f63e1129cb6eb43283d5c9b94a, +ERROR:root:FailedDataObject: nmdc:69e0ff48b6e98beda86e5af7f34f6b08, +ERROR:root:FailedDataObject: nmdc:9e98739e5b732faa33c43a8201e7ed56, +ERROR:root:FailedDataObject: nmdc:a413c42de4205d55104cd8345be14ee4, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:43271febc6321aab1c1f4caa6c5b310c, ReadBased Analysis Activity for nmdc:mga09wq921 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 4 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452675 +INFO:root:found 4 records +INFO:root:record: nmdc:de4b20197db8df3a05f5c8c7709adcdd, Assembly Activity for nmdc:mga05y7365 +INFO:root:PassingDataObject: nmdc:2199bd8cb934e80ea395d89d455a0845 +INFO:root:PassingDataObject: nmdc:b2fb4790d3b288536103663edcc2e32c +INFO:root:PassingDataObject: nmdc:e4d5311644a921f4faa505fb611589c0 +INFO:root:PassingDataObject: nmdc:1281a939ac0e14bfda53375ddb7213ab +INFO:root:PassingDataObject: nmdc:f7874dbccf08c4af3869e596f8fd3fa9 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:6e7fec2de31124c92fe30d04613d7846, Assembly Activity for nmdc:mga01dqc70 +INFO:root:PassingDataObject: nmdc:99450e461e2da67972735268b133ee0b +INFO:root:PassingDataObject: nmdc:180a17ab9acee114e5d0c4160c3ba5de +INFO:root:PassingDataObject: nmdc:109d967ccc3770762737224b74eeafc7 +INFO:root:PassingDataObject: nmdc:f006a72d94c40ebf3247426e14d71bb7 +INFO:root:PassingDataObject: nmdc:968fb3d59d36e1bf4fcc269b4c97f3b6 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:5def6a10a78144e90bd72e61e60e3fe1, Assembly Activity for nmdc:mga07t1c12 +INFO:root:PassingDataObject: nmdc:f046cb24581c6e2db8ddb8100f13bb81 +INFO:root:PassingDataObject: nmdc:ad914ce24ca6e945467701d068da2133 +INFO:root:PassingDataObject: nmdc:601c4a61ed41b99a21dd07e2896d5321 +INFO:root:PassingDataObject: nmdc:079eceb71da36c1bb6045ef1c1aee459 +INFO:root:PassingDataObject: nmdc:91ab3e9a136ca6b1412e48e80e25d167 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:43271febc6321aab1c1f4caa6c5b310c, Assembly Activity for nmdc:mga09wq921 +INFO:root:PassingDataObject: nmdc:1afbf414af728c609d2824295a8bd73e +INFO:root:PassingDataObject: nmdc:a57028da6b3fa0f59a153d562506c997 +INFO:root:PassingDataObject: nmdc:a6e7847cf2b05f836408a6faafd7131b +INFO:root:PassingDataObject: nmdc:f05c9920a862d06b2991c12a2935f267 +INFO:root:PassingDataObject: nmdc:b4a9f77834b6062369a8388f7040453b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452675 +INFO:root:found 4 records +INFO:root:record: nmdc:de4b20197db8df3a05f5c8c7709adcdd, Annotation Activity for nmdc:mga05y7365 +INFO:root:PassingDataObject: nmdc:b2060ade2400a8b857b0430dddf1fe06 +INFO:root:PassingDataObject: nmdc:1f5e4d21e3eca5279ef68f13e2d8f570 +INFO:root:PassingDataObject: nmdc:5d428f205c03bf04d5c055f977418fa0 +INFO:root:PassingDataObject: nmdc:3e4c7b08dd592db9ca7ad234275208e2 +INFO:root:PassingDataObject: nmdc:412acbdc711a75e1112b53ea7afd5a8e +INFO:root:PassingDataObject: nmdc:4fd37fe0559148c8a4d176f767d30332 +INFO:root:PassingDataObject: nmdc:b6aa1006ae97370c5807f9de8a16f11a +INFO:root:PassingDataObject: nmdc:ab698118ed2b03716c79fb91a84f7cdb +INFO:root:PassingDataObject: nmdc:a4f4bab80d8760f5a5e9931da3689ced +INFO:root:PassingDataObject: nmdc:6c855ca76185ef26105c2ee9c977a7c9 +INFO:root:PassingDataObject: nmdc:72ce4184f88acec765c761d2a8a4abc2 +INFO:root:PassingDataObject: nmdc:faa1bbf67e7c2dadecf6aa48b38aeaa2 +INFO:root:PassingDataObject: nmdc:af132b6f3f223a9d8f9666b814bab007 +INFO:root:PassingDataObject: nmdc:81dc312d90762cc972ff7c58539a0d76 +INFO:root:PassingDataObject: nmdc:7003fa1480fbfc5ea004c8ee249696b2 +INFO:root:PassingDataObject: nmdc:a5c8d3d710d0230d45146fcd5151b8a9 +INFO:root:PassingDataObject: nmdc:fc04b4203fd3ab803ed4e6c550707955 +INFO:root:PassingDataObject: nmdc:d26f06c73b4b642e57c78919f7eea494 +INFO:root:PassingDataObject: nmdc:fb4e0dc4c98b6f86f14208fe936420c0 +INFO:root:PassingDataObject: nmdc:eb2783fa81b6c4d25f7952387161da15 +INFO:root:PassingDataObject: nmdc:9b2d57f12fc8613381219c347ed6b8ec +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:de4b20197db8df3a05f5c8c7709adcdd +ERROR:root:failing_data_objects: 21 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:de4b20197db8df3a05f5c8c7709adcdd, Annotation Activity for nmdc:mga05y7365 +INFO:root:record: nmdc:6e7fec2de31124c92fe30d04613d7846, Annotation Activity for nmdc:mga01dqc70 +INFO:root:PassingDataObject: nmdc:bf46476ad11ad60a6314c3ae09186b39 +INFO:root:PassingDataObject: nmdc:cb363f97610541cd32f64f2c0808e9fc +INFO:root:PassingDataObject: nmdc:872a6b97dc16a99cc0a5ee50c51832a8 +INFO:root:PassingDataObject: nmdc:944884bc622ca4ebe3e91f0f58e8db57 +INFO:root:PassingDataObject: nmdc:e23574bf95793830f6f45f411500f76d +INFO:root:PassingDataObject: nmdc:41832b0574a40f7394fda5d1d24539e0 +INFO:root:PassingDataObject: nmdc:4039bcb670ed427904b7784de6fa6062 +INFO:root:PassingDataObject: nmdc:d91ca7386e36f35b1fa43dd91f6225ef +INFO:root:PassingDataObject: nmdc:34335e1afc903ba3380a197e87162858 +INFO:root:PassingDataObject: nmdc:922bfcb1311977ded6ab5b582b736933 +INFO:root:PassingDataObject: nmdc:98db278abeddd8afceff4773b87bf982 +INFO:root:PassingDataObject: nmdc:ddef5f12d0ace8c265f3001c562b43da +INFO:root:PassingDataObject: nmdc:915c45fc0fe87fe1d8171f4b625320c4 +INFO:root:PassingDataObject: nmdc:894107bc5b91e7f1bec3fa3be6a92b5e +INFO:root:PassingDataObject: nmdc:4bf3796288dc8012bc63683c89a1a888 +INFO:root:PassingDataObject: nmdc:406296e778981d9d7180f65df5a67bdf +INFO:root:PassingDataObject: nmdc:2f2b80cd35ed819980d81ed98b94d4d6 +INFO:root:PassingDataObject: nmdc:e39cb7ead851e22a78382e2add323f48 +INFO:root:PassingDataObject: nmdc:ea1ce5481a0200c2f45ef8a6736545f6 +INFO:root:PassingDataObject: nmdc:90157e687a88d79cd3281d7d15857b7d +INFO:root:PassingDataObject: nmdc:5de0718dfeaff04d9ba9e6ff3b31d3c7 +INFO:root:PassingDataObject: nmdc:c956ab7b1e61ecbb4968e6a0e801fa97 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:5def6a10a78144e90bd72e61e60e3fe1, Annotation Activity for nmdc:mga07t1c12 +INFO:root:PassingDataObject: nmdc:f681748a070b55f6d4a197e2a0d46548 +INFO:root:PassingDataObject: nmdc:8b8c24326185d6b56d77d72ee2bcac9e +INFO:root:PassingDataObject: nmdc:495dcf601e73a18ef0cf5336f2f35899 +INFO:root:PassingDataObject: nmdc:c16a1ca305ea79eb206c1df3c1a2ff15 +INFO:root:PassingDataObject: nmdc:21d88b960855381e46cafc4500a1bf24 +INFO:root:PassingDataObject: nmdc:f8d00cf842cc33e52fbd930815fc26c1 +INFO:root:PassingDataObject: nmdc:86a5893f16bc58914d2d79ca7c897b04 +INFO:root:PassingDataObject: nmdc:bcc11895496c14a02ce2a44bb6a7516a +INFO:root:PassingDataObject: nmdc:12b0c20808f444fb39975c286faf31f2 +INFO:root:PassingDataObject: nmdc:a4b0dd7a409e27f13dbba61386c672f1 +INFO:root:PassingDataObject: nmdc:396df88bc7c383962ede086e15b1f4e4 +INFO:root:PassingDataObject: nmdc:fa5dcc0d298c41db89600bbab5a6ff95 +INFO:root:PassingDataObject: nmdc:37c51e0d56564c038aefdc970a736f6c +INFO:root:PassingDataObject: nmdc:dde23cfa4450db98392a76336291f480 +INFO:root:PassingDataObject: nmdc:6dae53f3fbb6d1cc6955fb2c115c0a92 +INFO:root:PassingDataObject: nmdc:115bfab4827aa24af2ee578b4182ccfe +INFO:root:PassingDataObject: nmdc:e879d45e189d333c6f09975c1336c76b +INFO:root:PassingDataObject: nmdc:512552531a509280b26fd8c14914a0b5 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:5def6a10a78144e90bd72e61e60e3fe1 +ERROR:root:FailedDataObject: nmdc:8874c01421e2e8d706d301ce6f46971c, +ERROR:root:FailedDataObject: nmdc:1eb1038316c9c108e0b3cd9bc172a695, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5def6a10a78144e90bd72e61e60e3fe1, Annotation Activity for nmdc:mga07t1c12 +INFO:root:record: nmdc:43271febc6321aab1c1f4caa6c5b310c, Annotation Activity for nmdc:mga09wq921 +INFO:root:PassingDataObject: nmdc:ee980028839d876eba658a4f23ee677a +INFO:root:PassingDataObject: nmdc:dcfffca43721b62ffb522b997beed032 +INFO:root:PassingDataObject: nmdc:25273028b67886346aabcf21f925c0f4 +INFO:root:PassingDataObject: nmdc:94d4cd43bd304712b71d87d5f7fdb7cf +INFO:root:PassingDataObject: nmdc:8f4883255bf06472859c22616b3dd8fe +INFO:root:PassingDataObject: nmdc:54b345e6933eab6ba73241ccab500ffa +INFO:root:PassingDataObject: nmdc:ed6fe21d0dd3428d4860c9d30231551f +INFO:root:PassingDataObject: nmdc:2ebfa212da10357331454fb124dd5625 +INFO:root:PassingDataObject: nmdc:a6692cff5b5f84fe235a0c893f6dea49 +INFO:root:PassingDataObject: nmdc:0b7aef1c91ab7d42f2fa183916cb1f46 +INFO:root:PassingDataObject: nmdc:453e805a7db9ace92b62bc36c406b187 +INFO:root:PassingDataObject: nmdc:b39bcf88bcfbfaa8558d7e1812c0f729 +INFO:root:PassingDataObject: nmdc:f93153cb6f4aca356b4a6f5a98b4f2c6 +INFO:root:PassingDataObject: nmdc:e6a4384ac1855950addaad745a9b81b3 +INFO:root:PassingDataObject: nmdc:ef127209ee065daa38dbd7232e1301d6 +INFO:root:PassingDataObject: nmdc:2671f33ec964d4240521431fc65d2abf +INFO:root:PassingDataObject: nmdc:e9c75d8901637646cc7ed3eba6037883 +INFO:root:PassingDataObject: nmdc:e61562378ff08c0fdf1624cfc531819a +INFO:root:PassingDataObject: nmdc:556a877919ba050a3400bbddc15db8c8 +INFO:root:PassingDataObject: nmdc:dba21925766ddeb5123e5029364d0c7e +INFO:root:PassingDataObject: nmdc:6e87f3f41e60d446a340255bce226635 +INFO:root:PassingDataObject: nmdc:f875a8b5f5480ff95d0d2cacb75583ac +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452675 +INFO:root:found 4 records +INFO:root:record: nmdc:de4b20197db8df3a05f5c8c7709adcdd, MAGs Analysis Activity for nmdc:mga05y7365 +INFO:root:PassingDataObject: nmdc:1dd6f4da00585325ed0e9d779105cdb7 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:de4b20197db8df3a05f5c8c7709adcdd +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:de4b20197db8df3a05f5c8c7709adcdd, MAGs Analysis Activity for nmdc:mga05y7365 +INFO:root:record: nmdc:43271febc6321aab1c1f4caa6c5b310c, MAGs Analysis Activity for nmdc:mga09wq921 +INFO:root:PassingDataObject: nmdc:4bd257b260e4a952792e6c0b09c1a559 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:43271febc6321aab1c1f4caa6c5b310c +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:43271febc6321aab1c1f4caa6c5b310c, MAGs Analysis Activity for nmdc:mga09wq921 +INFO:root:record: nmdc:6e7fec2de31124c92fe30d04613d7846, MAGs Analysis Activity for nmdc:mga01dqc70 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:6e7fec2de31124c92fe30d04613d7846 +ERROR:root:FailedDataObject: nmdc:15270a15e56286a2868c4fe0e5164d16, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:6e7fec2de31124c92fe30d04613d7846, MAGs Analysis Activity for nmdc:mga01dqc70 +INFO:root:record: nmdc:5def6a10a78144e90bd72e61e60e3fe1, MAGs Analysis Activity for nmdc:mga07t1c12 +INFO:root:PassingDataObject: nmdc:168e5543f2688f062a73a29e43eeefcf +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5def6a10a78144e90bd72e61e60e3fe1 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5def6a10a78144e90bd72e61e60e3fe1, MAGs Analysis Activity for nmdc:mga07t1c12 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452675 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-jzmz6271 +INFO:root:legacy_id: gold:Gp0452552 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-jzmz6271 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:51072ee90274271c8cfff81fd9f48915 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f2a99c8fcf40206d11803de7db135121 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452552 +INFO:root:found 2 records +INFO:root:record: nmdc:bef4c33723e929cb3ec5dfa229edc2e0, Read QC Activity for nmdc:mga02tmf43 +INFO:root:PassingDataObject: nmdc:b6e406668ad15e471b66736078de50f6 +INFO:root:PassingDataObject: nmdc:a9bbafb17de735143b48f374960aa99a +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:7d4921c091736a97916f5e2d24730951, Read QC Activity for nmdc:mga0tg3e35 +INFO:root:PassingDataObject: nmdc:cad3f5b093bf543b66304f57f3f5d2be +INFO:root:PassingDataObject: nmdc:9afff0d88bc7e32530f04e72f7914a3e +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452552 +INFO:root:found 2 records +INFO:root:record: nmdc:bef4c33723e929cb3ec5dfa229edc2e0, ReadBased Analysis Activity for nmdc:mga02tmf43 +INFO:root:PassingDataObject: nmdc:56ffb2984f254b32c134ca13ca7c1585 +INFO:root:PassingDataObject: nmdc:ad7513125ada76a9f097edb8c7589630 +INFO:root:PassingDataObject: nmdc:c5bcf6666d39a5f954cf7b1c1c2eb39f +INFO:root:PassingDataObject: nmdc:f7f57a317d6309c139c8d92e3790e2b6 +INFO:root:PassingDataObject: nmdc:8b5f505bd4183cf916cf62260ab02c62 +INFO:root:PassingDataObject: nmdc:ef533a1858eda65eada6b60d8d724546 +INFO:root:PassingDataObject: nmdc:0244678b8a3e0a7102b3b93730e45212 +INFO:root:PassingDataObject: nmdc:0ca04e278c59476099bef8701920fae3 +INFO:root:PassingDataObject: nmdc:80c35b73602f8e504fea7d994f4ae36a +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:7d4921c091736a97916f5e2d24730951, ReadBased Analysis Activity for nmdc:mga0tg3e35 +INFO:root:PassingDataObject: nmdc:b5a4a3a35749e00a01f3f8d87bd866ed +INFO:root:PassingDataObject: nmdc:a6ef39a8e0fb9b8f7611617a32d4aee3 +INFO:root:PassingDataObject: nmdc:73aac43eab9964d9c1233fece95ae9b0 +INFO:root:PassingDataObject: nmdc:6ba19781632a621dd5b84ac4f73b24e7 +INFO:root:PassingDataObject: nmdc:c693cc3f849c15b8aa6a7457209ed778 +INFO:root:PassingDataObject: nmdc:6db3fb337debea2050b2e94174d00b1d +INFO:root:PassingDataObject: nmdc:baae431babdd566ef5a97b9f503d13d2 +INFO:root:PassingDataObject: nmdc:e50d0a7e56917eb57baad110404f15e6 +INFO:root:PassingDataObject: nmdc:b26d3c5db320a4719f3d25518281facc +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452552 +INFO:root:found 2 records +INFO:root:record: nmdc:7d4921c091736a97916f5e2d24730951, Assembly Activity for nmdc:mga0tg3e35 +INFO:root:PassingDataObject: nmdc:6e835e14df63cf294591f57a74d99f4c +INFO:root:PassingDataObject: nmdc:211b3db209cfe9354ddad2db873c501c +INFO:root:PassingDataObject: nmdc:d62f0b20ed3c6a768c3a3c210ebb0450 +INFO:root:PassingDataObject: nmdc:a28464dbe143eebcc334dcafc817d257 +INFO:root:PassingDataObject: nmdc:bd046e89b7f4dbc5437fff2b4b17369a +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:bef4c33723e929cb3ec5dfa229edc2e0, Assembly Activity for nmdc:mga02tmf43 +INFO:root:PassingDataObject: nmdc:4688f010b6711e97f7aee20d6c9d47bf +INFO:root:PassingDataObject: nmdc:0aa9aaf7fad35567be3fb80e7e32ab5a +INFO:root:PassingDataObject: nmdc:0dbf5adec1b132441e1dd944f8763ff8 +INFO:root:PassingDataObject: nmdc:e19ee1727b11bbedd5d3cad448424b46 +INFO:root:PassingDataObject: nmdc:8242e97cd0f39af7422727b1d8b4919a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452552 +INFO:root:found 2 records +INFO:root:record: nmdc:7d4921c091736a97916f5e2d24730951, Annotation Activity for nmdc:mga0tg3e35 +INFO:root:PassingDataObject: nmdc:8e44aa2660108e0e93ba81e04cff54aa +INFO:root:PassingDataObject: nmdc:3abee9503fdcacff37d42637cfe546c5 +INFO:root:PassingDataObject: nmdc:cc4fcaf4dccc435b7caff8f3b2b570b9 +INFO:root:PassingDataObject: nmdc:03ab2ddcff8d43649a42aed0f04bc650 +INFO:root:PassingDataObject: nmdc:6c9ce12d2ac7b390454dc74386801e08 +INFO:root:PassingDataObject: nmdc:1536a5a25b197eeee2e0734d32f335a3 +INFO:root:PassingDataObject: nmdc:282842b277425c05372a3addfc443f17 +INFO:root:PassingDataObject: nmdc:68edda7cd85d35ece081ea27d3acec5d +INFO:root:PassingDataObject: nmdc:f2443af52e9b7bde6a3c08fddc6666f1 +INFO:root:PassingDataObject: nmdc:e4e03e7ef5c3870fa3a6d15dce066223 +INFO:root:PassingDataObject: nmdc:f393b3ba73e6d585559804576461557f +INFO:root:PassingDataObject: nmdc:7b2b01ba6228728267093f0a6c8ac9cd +INFO:root:PassingDataObject: nmdc:35ea0f29b57a05bce4f1af6cb0578705 +INFO:root:PassingDataObject: nmdc:4dbd911e61e35cd26821a786de9164e2 +INFO:root:PassingDataObject: nmdc:04b6689be26ece75051c060c140d05ae +INFO:root:PassingDataObject: nmdc:d40eeef5abbce91a7bed7263d8faa02f +INFO:root:PassingDataObject: nmdc:544a50dd35353fdba242ad16dea7301f +INFO:root:PassingDataObject: nmdc:a861bbdb6d355cb66ee1572ee01b12df +INFO:root:PassingDataObject: nmdc:f25905251d37056a60c7f641cf056718 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:7d4921c091736a97916f5e2d24730951 +ERROR:root:FailedDataObject: nmdc:07ab7815bfbdf65b1fa2b49d233d0c75, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7d4921c091736a97916f5e2d24730951, Annotation Activity for nmdc:mga0tg3e35 +INFO:root:record: nmdc:bef4c33723e929cb3ec5dfa229edc2e0, Annotation Activity for nmdc:mga02tmf43 +INFO:root:PassingDataObject: nmdc:0e702ba4c8ffa4d58d9df504f59700cc +INFO:root:PassingDataObject: nmdc:819e2e2b51d5b653206d6e9778e59bc5 +INFO:root:PassingDataObject: nmdc:e91e8cf7087224edf37dbefae0a39d59 +INFO:root:PassingDataObject: nmdc:0b7964d0644d6e5c08a4c50fbf997ed4 +INFO:root:PassingDataObject: nmdc:79b27cfe024b9f215aa4eb0023588dbb +INFO:root:PassingDataObject: nmdc:fe4197189e960ba4de3aa5d000cd4680 +INFO:root:PassingDataObject: nmdc:02d3ebd0777f931a646c07d10ea775fd +INFO:root:PassingDataObject: nmdc:d2d985f9e5c232edb5d50d6a9b77e47d +INFO:root:PassingDataObject: nmdc:8754b811daede94c392c7d2f86c53468 +INFO:root:PassingDataObject: nmdc:d30949e062b08cbbbefa4f6cee05fe34 +INFO:root:PassingDataObject: nmdc:00a134480928c55dee30dad820256c93 +INFO:root:PassingDataObject: nmdc:3c1cf164a9597944db11c76bd7b53107 +INFO:root:PassingDataObject: nmdc:55c41a531054033720a7af9d5d0e6b90 +INFO:root:PassingDataObject: nmdc:d40cb4f43e06d5b173d36e544016f140 +INFO:root:PassingDataObject: nmdc:2e4b9d5672620c2065dee07fe30a5bad +INFO:root:PassingDataObject: nmdc:19a190b5baac5162a18b61a48ce38991 +INFO:root:PassingDataObject: nmdc:1f229ae75454e4524b84b4eb5ba0937b +INFO:root:PassingDataObject: nmdc:81162d48427b31839fd64a6966265073 +INFO:root:PassingDataObject: nmdc:1219b7259fad618d06dabfaa5c7ef4fe +INFO:root:PassingDataObject: nmdc:36038a2c8c519f54c66bed2ddedbda8b +INFO:root:PassingDataObject: nmdc:e035f64071d5a427adaeb8fec206e2af +INFO:root:PassingDataObject: nmdc:a065d8b37970961a645d09e5c392c0d0 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452552 +INFO:root:found 2 records +INFO:root:record: nmdc:bef4c33723e929cb3ec5dfa229edc2e0, MAGs Analysis Activity for nmdc:mga02tmf43 +INFO:root:PassingDataObject: nmdc:a9c91647d3a33e5ce3f7e930463272a4 +INFO:root:PassingDataObject: nmdc:6bdfd7ab1df190076f8525a53a5cb21f +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:7d4921c091736a97916f5e2d24730951, MAGs Analysis Activity for nmdc:mga0tg3e35 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:7d4921c091736a97916f5e2d24730951 +ERROR:root:FailedDataObject: nmdc:f3cb10b50c65517ab3a9a61334ab8780, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7d4921c091736a97916f5e2d24730951, MAGs Analysis Activity for nmdc:mga0tg3e35 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452552 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-j8039c34 +INFO:root:legacy_id: gold:Gp0452663 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-j8039c34 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:dd0f350e3ce5c7589b9270271eaec619 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452663 +INFO:root:found 1 records +INFO:root:record: nmdc:89d6d135010e55068c1e62f51df114b7, Read QC Activity for nmdc:mga0tnd538 +INFO:root:PassingDataObject: nmdc:36e420ca523418cda6008cc47241221f +INFO:root:PassingDataObject: nmdc:43f24b218fad596e83bd9f3a53a73c41 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452663 +INFO:root:found 1 records +INFO:root:record: nmdc:89d6d135010e55068c1e62f51df114b7, ReadBased Analysis Activity for nmdc:mga0tnd538 +INFO:root:PassingDataObject: nmdc:8d6c4de59f156a2b339fed8b37c1177c +INFO:root:PassingDataObject: nmdc:e5cdea4fa5b92c1742802b4aa429cf19 +INFO:root:PassingDataObject: nmdc:00077b9d814de926dd293ccada05a551 +INFO:root:PassingDataObject: nmdc:c4881e51eaa3972d0dbe57abaae4e46a +INFO:root:PassingDataObject: nmdc:a11db17c58fc3829d0a7800223cb587d +INFO:root:PassingDataObject: nmdc:86103c1db1ad3fa4d2b8f7e1a5706bdf +INFO:root:PassingDataObject: nmdc:e32151bd64ed5b8f5fc3b394fb984afa +INFO:root:PassingDataObject: nmdc:af517dd8a5f2338e83121a4928a7b671 +INFO:root:PassingDataObject: nmdc:60329707c759efa59ac861d1a2fb5fc2 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452663 +INFO:root:found 1 records +INFO:root:record: nmdc:89d6d135010e55068c1e62f51df114b7, Assembly Activity for nmdc:mga0tnd538 +INFO:root:PassingDataObject: nmdc:223331a375dddde1360ea606ac5ab5f3 +INFO:root:PassingDataObject: nmdc:50cf2ae224585cd107a1d35e744ec903 +INFO:root:PassingDataObject: nmdc:ad9d37fd4ec5a647b40c61f561e39692 +INFO:root:PassingDataObject: nmdc:ad6c182500689538e3e021c2694d918f +INFO:root:PassingDataObject: nmdc:941bce051475bf0771b6ed6a5b4509ed +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452663 +INFO:root:found 1 records +INFO:root:record: nmdc:89d6d135010e55068c1e62f51df114b7, Annotation Activity for nmdc:mga0tnd538 +INFO:root:PassingDataObject: nmdc:18c9e7b7138d1d5d5c11b5d824d9012a +INFO:root:PassingDataObject: nmdc:f8bdab27635e6a003f7fdc9ff15dc552 +INFO:root:PassingDataObject: nmdc:f29153756aff5feba545ee1a66188874 +INFO:root:PassingDataObject: nmdc:f1013d281637f57d0c5cb36538783a9c +INFO:root:PassingDataObject: nmdc:416d25bb3fbb35ed57cb411436de1777 +INFO:root:PassingDataObject: nmdc:029a313c44e8d877916187b5ba226e24 +INFO:root:PassingDataObject: nmdc:5ce97483c4705899b99bc9729fad4ed8 +INFO:root:PassingDataObject: nmdc:dd2c7dcdd4e3d771392993edbf6401ad +INFO:root:PassingDataObject: nmdc:5b5eda19a015f3de0f4cf5742b77a98b +INFO:root:PassingDataObject: nmdc:57e7e3902e788c2c105eb88cdf614829 +INFO:root:PassingDataObject: nmdc:8fa8d8ad19ee5137625005a52a4aa36c +INFO:root:PassingDataObject: nmdc:1f660ce80b73677a4b41dbdf9fa79765 +INFO:root:PassingDataObject: nmdc:491845e1e1a119f39db79ec1a47c5da2 +INFO:root:PassingDataObject: nmdc:a5708b06a98a560cfa17d4e4457230e6 +INFO:root:PassingDataObject: nmdc:69c888af27e6a03eb1fedd6b8bd51383 +INFO:root:PassingDataObject: nmdc:60a03c58dd9100e5a634a14c0172b2a9 +INFO:root:PassingDataObject: nmdc:02651f9bfc4f3ac151d9cf7bb60c3f2a +INFO:root:PassingDataObject: nmdc:972e307cc7e11d603aa1b2de686c4ab3 +INFO:root:PassingDataObject: nmdc:343808985cb268d38428d23491e92278 +INFO:root:PassingDataObject: nmdc:43cbbf8694d22442f296ae37e7e06d3c +INFO:root:PassingDataObject: nmdc:2b4f5ff55c787edc0b6ebd2802009739 +INFO:root:PassingDataObject: nmdc:43b9c4a123898983bdbd0188efeaf59b +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452663 +INFO:root:found 1 records +INFO:root:record: nmdc:89d6d135010e55068c1e62f51df114b7, MAGs Analysis Activity for nmdc:mga0tnd538 +INFO:root:PassingDataObject: nmdc:58862b442390474c15a10db0832cebd7 +INFO:root:PassingDataObject: nmdc:c725cc85abce14540cd78142bbda58f2 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452663 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-b6sr7v63 +INFO:root:legacy_id: gold:Gp0452655 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-b6sr7v63 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:db88151fb4352c39b2d186af1d86593f +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7569579396b6e7260592806978a23076 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:773ce209bd596562ccf16664d3f986cc +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d4c0354357e501cc04b78d29f0d0f999 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452655 +INFO:root:found 4 records +INFO:root:record: nmdc:eebd8ca2bff072bd226d823403e71f03, Read QC Activity for nmdc:mga0652t21 +INFO:root:PassingDataObject: nmdc:589c3d2de3303d20e9bccbcf31141b06 +INFO:root:PassingDataObject: nmdc:bdf626437ffd47a320ca17818919730d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc, Read QC Activity for nmdc:mga054x719 +INFO:root:PassingDataObject: nmdc:d713c3ea72fcc2b11e2a76c29d520d2f +INFO:root:PassingDataObject: nmdc:228ca05ace2e4f026fc2bc600b1ec969 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:d2367fd701a924adc40a9f39eacf696c, Read QC Activity for nmdc:mga0ndba77 +INFO:root:PassingDataObject: nmdc:514916ab12cd3259442fca1feec9a798 +INFO:root:PassingDataObject: nmdc:8069b754e98cf9d91fcbeb9060cdf373 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:1a10a8b4212d28a45ec0411141ea8588, Read QC Activity for nmdc:mga00c4z05 +INFO:root:PassingDataObject: nmdc:3bf3cc39fcea83359d267fe071022f86 +INFO:root:PassingDataObject: nmdc:a42550f35311a4d92b96aaa519ac3c9e +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452655 +INFO:root:found 4 records +INFO:root:record: nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc, ReadBased Analysis Activity for nmdc:mga054x719 +INFO:root:PassingDataObject: nmdc:892893400122d7b144f702341ec01143 +INFO:root:PassingDataObject: nmdc:0874acc644c264a6eda2692b17d66987 +INFO:root:PassingDataObject: nmdc:04520ac6dd40f8bdb3c95d93579e1053 +INFO:root:PassingDataObject: nmdc:e7ab1770a0ed0e784d98267d28326f9c +INFO:root:PassingDataObject: nmdc:de7516d955e4dccb0eac1a7e626e5a7e +INFO:root:PassingDataObject: nmdc:b27d19f34c7c3317c4edaedae7fb0638 +INFO:root:PassingDataObject: nmdc:a67f2929268c5ceff913e52bf94c7f1b +INFO:root:PassingDataObject: nmdc:3f3588683e376146f87414524d46b214 +INFO:root:PassingDataObject: nmdc:853160e79cf9557666e84941086b2284 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:eebd8ca2bff072bd226d823403e71f03, ReadBased Analysis Activity for nmdc:mga0652t21 +INFO:root:PassingDataObject: nmdc:c3048b340bd286f81e5f73727282f9c4 +INFO:root:PassingDataObject: nmdc:357bfd64db235f2aef9e1c9f7cf6a279 +INFO:root:PassingDataObject: nmdc:3ce08051bfda7ff0fcac5f7d360ac5b6 +INFO:root:PassingDataObject: nmdc:3e29a57bb03fcdb0604e0d559752b869 +INFO:root:PassingDataObject: nmdc:fc5c7e4fe6d63c78ea89ca92149a7ea8 +INFO:root:PassingDataObject: nmdc:01dc0f52651adb20ff27be6770d1e08f +INFO:root:PassingDataObject: nmdc:94edfff7bdcedb55078eb8807f27781f +INFO:root:PassingDataObject: nmdc:19a6a2c0eb20aeee8b4dffdd07de7e58 +INFO:root:PassingDataObject: nmdc:887be42e24cfc1ad45c1a500739fe439 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:d2367fd701a924adc40a9f39eacf696c, ReadBased Analysis Activity for nmdc:mga0ndba77 +INFO:root:PassingDataObject: nmdc:ea29c06e20216c41fb383361c8b9d498 +INFO:root:PassingDataObject: nmdc:7a8c4eb0853cfba94891146ec58bd789 +INFO:root:PassingDataObject: nmdc:b609918e90765a70b25cc28ceb7383d7 +INFO:root:PassingDataObject: nmdc:1725a96e46459ead1db03a1f43186a03 +INFO:root:PassingDataObject: nmdc:bbdabc129ded2701b9602ea9a919150f +INFO:root:PassingDataObject: nmdc:5ee8fbedf891338a73440c296a1b44f6 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:d2367fd701a924adc40a9f39eacf696c +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:d2367fd701a924adc40a9f39eacf696c +ERROR:root:FailedDataObject: nmdc:5e57d8a3272e1c2f353bc916e36020ae, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d2367fd701a924adc40a9f39eacf696c, ReadBased Analysis Activity for nmdc:mga0ndba77 +INFO:root:record: nmdc:1a10a8b4212d28a45ec0411141ea8588, ReadBased Analysis Activity for nmdc:mga00c4z05 +INFO:root:PassingDataObject: nmdc:7ce7ad795348a926841b3309eb6179dc +INFO:root:PassingDataObject: nmdc:6c34b6ab952d1b4553a62f00eb782f26 +INFO:root:PassingDataObject: nmdc:84cb9e92bd7a7617d16d3eaa2964f358 +INFO:root:PassingDataObject: nmdc:e36b9ecd7af8f6a7763258790e1cbf97 +INFO:root:PassingDataObject: nmdc:24e022b2eb9538c246cad49b20b28017 +INFO:root:PassingDataObject: nmdc:9d74ddd01f82433cd116dedf4e1e5b55 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:1a10a8b4212d28a45ec0411141ea8588 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:1a10a8b4212d28a45ec0411141ea8588 +ERROR:root:FailedDataObject: nmdc:8083b4c4ab9c9133e4b31cf549bfe9b3, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1a10a8b4212d28a45ec0411141ea8588, ReadBased Analysis Activity for nmdc:mga00c4z05 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452655 +INFO:root:found 4 records +INFO:root:record: nmdc:d2367fd701a924adc40a9f39eacf696c, Assembly Activity for nmdc:mga0ndba77 +INFO:root:PassingDataObject: nmdc:7aee17f31766ef7075649727e58d9e43 +INFO:root:PassingDataObject: nmdc:79ada2dc1d366bf0abaafd1efdaf3c75 +INFO:root:PassingDataObject: nmdc:6c1accc9f097b6fc9eb87220c8dcdecd +INFO:root:PassingDataObject: nmdc:c9f05c82e532a178002405cd883144c3 +INFO:root:PassingDataObject: nmdc:c7267999fc11fe5ac00c70dd486cbbbf +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:1a10a8b4212d28a45ec0411141ea8588, Assembly Activity for nmdc:mga00c4z05 +INFO:root:PassingDataObject: nmdc:0905068d37edb737616da707ed845fff +INFO:root:PassingDataObject: nmdc:7dce143fed8f91261cab5129ba924d07 +INFO:root:PassingDataObject: nmdc:c84f77e9e20ba37bfb18efc4eb6a54ae +INFO:root:PassingDataObject: nmdc:8ae6312322c4fc9cd3046acda82c87c7 +INFO:root:PassingDataObject: nmdc:c83454ff6384498e8d0a62a2927f1b18 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc, Assembly Activity for nmdc:mga054x719 +INFO:root:PassingDataObject: nmdc:46567f3e102bbb1d7ce4aff790a82285 +INFO:root:PassingDataObject: nmdc:d29839f84d0da373f9add30af83f0698 +INFO:root:PassingDataObject: nmdc:fcce2682531768d8cc389f3c93b963c2 +INFO:root:PassingDataObject: nmdc:5e67c2e1a449a99d21755193830ceadc +INFO:root:PassingDataObject: nmdc:fc7b3aa9dbad57878f64ed706e1f4079 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:eebd8ca2bff072bd226d823403e71f03, Assembly Activity for nmdc:mga0652t21 +INFO:root:PassingDataObject: nmdc:5b2172bc7d3e63924a754bc67e92d6d5 +INFO:root:PassingDataObject: nmdc:d536534ee6ef85359bc0d8195ca18578 +INFO:root:PassingDataObject: nmdc:c1f03c0fc61d48637df5124693006e50 +INFO:root:PassingDataObject: nmdc:50a9dbc703f5981f88e71409642020c0 +INFO:root:PassingDataObject: nmdc:37343753bdc13fc34099c92dfaa36bd2 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452655 +INFO:root:found 4 records +INFO:root:record: nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc, Annotation Activity for nmdc:mga054x719 +INFO:root:PassingDataObject: nmdc:a1877abb47e8167d27a2ff85772a3510 +INFO:root:PassingDataObject: nmdc:8d35571b82bf76ecf40f6f020cfc5a99 +INFO:root:PassingDataObject: nmdc:4506ae79d0c41d4688eed73e1e8214e9 +INFO:root:PassingDataObject: nmdc:c4eec290e1818af5db2779dac4a6e7c7 +INFO:root:PassingDataObject: nmdc:eaf4388cd04df4b18c4bea0c831e06a3 +INFO:root:PassingDataObject: nmdc:90f736758cf348ef9edce74564e27e70 +INFO:root:PassingDataObject: nmdc:1cc63d016a079e6c76cca2c7fbf7f190 +INFO:root:PassingDataObject: nmdc:d583b62a2c2accb4f0a3e383a7b03431 +INFO:root:PassingDataObject: nmdc:4f6a4d4c87d0617c24ca645af7a0df8d +INFO:root:PassingDataObject: nmdc:0cf24fa09812a0c526674dbdb60ec777 +INFO:root:PassingDataObject: nmdc:6b80ac8fc663588fd58a69a372c55c57 +INFO:root:PassingDataObject: nmdc:31281d3b856df4907d7c316af0aecdc6 +INFO:root:PassingDataObject: nmdc:f1c39110db32ec51b4f1ba5652006b62 +INFO:root:PassingDataObject: nmdc:64c941cc78b57d3e5a671a7d527bd52f +INFO:root:PassingDataObject: nmdc:2a87831ca8077137bdaf3bd5ab0c7f89 +INFO:root:PassingDataObject: nmdc:9044f0f95c22c78474162507e2ad7edb +INFO:root:PassingDataObject: nmdc:75e01e0af5121e9de644ed045629b591 +INFO:root:PassingDataObject: nmdc:77827d2e4ed0aaee108330b13eaaa21e +INFO:root:PassingDataObject: nmdc:afc65493bb14cac938e3b87728ca05f6 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc +ERROR:root:FailedDataObject: nmdc:e78851ce9a93da6f545ee91447d1f0bf, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc, Annotation Activity for nmdc:mga054x719 +INFO:root:record: nmdc:eebd8ca2bff072bd226d823403e71f03, Annotation Activity for nmdc:mga0652t21 +INFO:root:PassingDataObject: nmdc:ef192928a3aba13ad2db38111fe9f140 +INFO:root:PassingDataObject: nmdc:54d018225f0a3a7b885df57b3f36442b +INFO:root:PassingDataObject: nmdc:a46cbacb1aef43ad38da8cfddfb919c0 +INFO:root:PassingDataObject: nmdc:2e8395d16b7bddf57ee29c2b4e4641fa +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:eebd8ca2bff072bd226d823403e71f03 +ERROR:root:FailedDataObject: nmdc:e47e984c27043b5c933105bc215e138c, +ERROR:root:FailedDataObject: nmdc:7b4a2c020b76903b09da0900482d7951, +ERROR:root:FailedDataObject: nmdc:7c95954ca521b2f6966e9047c5af2832, +ERROR:root:FailedDataObject: nmdc:ebe87473e065e803303d921c2f63888e, +ERROR:root:FailedDataObject: nmdc:b76f2feda491efbd20467bbb127ff917, +ERROR:root:FailedDataObject: nmdc:56acb7a7ed7d49705ef456aabd4ed1e6, +ERROR:root:FailedDataObject: nmdc:94f7a8ae6412d3417afb6c58d57b3aa5, +ERROR:root:FailedDataObject: nmdc:83f8d18e25dd4f65ab9034866535d589, +ERROR:root:FailedDataObject: nmdc:469ae3c42f6461628aaf5714a7662877, +ERROR:root:FailedDataObject: nmdc:56610fbbbdf44e0cfb3f5d5241763cde, +ERROR:root:FailedDataObject: nmdc:aac91188eee3c9c540e8543019487dea, +ERROR:root:FailedDataObject: nmdc:5e777a3cf810f24331e74973829347ea, +ERROR:root:FailedDataObject: nmdc:6bcb6ee379348d01ee9524006aec49e2, +ERROR:root:FailedDataObject: nmdc:c66e6697dad2857e4e197b391f1a4930, +ERROR:root:FailedDataObject: nmdc:b28bd8d9db50465e52bec078a92a969c, +ERROR:root:FailedDataObject: nmdc:7e3a6350c1437e762b88bd7cb3ebb96f, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:eebd8ca2bff072bd226d823403e71f03, Annotation Activity for nmdc:mga0652t21 +INFO:root:record: nmdc:d2367fd701a924adc40a9f39eacf696c, Annotation Activity for nmdc:mga0ndba77 +INFO:root:PassingDataObject: nmdc:3b6e1128d25b953cf8e5f35509b1fcdb +INFO:root:PassingDataObject: nmdc:ce0ee9eb5ac820f8121d8165f6254f7c +INFO:root:PassingDataObject: nmdc:5f26e2c511bb0784d076438bc729876d +INFO:root:PassingDataObject: nmdc:b73b416c69e3cab760f56187184c0d66 +INFO:root:PassingDataObject: nmdc:dad676f42b3d7dc77d3cf94e618d81f5 +INFO:root:PassingDataObject: nmdc:a62995858d4bb19a0c29984ebae3e0e3 +INFO:root:PassingDataObject: nmdc:e26b24d0150d0ae6921fe9ab2a996474 +INFO:root:PassingDataObject: nmdc:884963930b592f241458192b54428469 +INFO:root:PassingDataObject: nmdc:f7f41b48f6236cc01a0ef298018b900a +INFO:root:PassingDataObject: nmdc:f6e1dfc39fc87fff998d78e5a1082535 +INFO:root:PassingDataObject: nmdc:ea85910523b67feeda48c5b8555e2fb7 +INFO:root:PassingDataObject: nmdc:621c7fb97a2e213450292b4a66941a3c +INFO:root:PassingDataObject: nmdc:790a1ac6096ececd5215af09081fe2b6 +INFO:root:PassingDataObject: nmdc:6746256799585aacf88db9395830eedc +INFO:root:PassingDataObject: nmdc:b877f0494a2fd8c128bd7c9294771feb +INFO:root:PassingDataObject: nmdc:c7a079c28b8ce45fcc453cdb545c5b47 +INFO:root:PassingDataObject: nmdc:54c24e11729f1c8898eebb9ba97be7de +INFO:root:PassingDataObject: nmdc:b654aa3854c7fb04a00c923a8aac8493 +INFO:root:PassingDataObject: nmdc:cdb51df956b087cd11b5751eeecba453 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:d2367fd701a924adc40a9f39eacf696c +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d2367fd701a924adc40a9f39eacf696c, Annotation Activity for nmdc:mga0ndba77 +INFO:root:record: nmdc:1a10a8b4212d28a45ec0411141ea8588, Annotation Activity for nmdc:mga00c4z05 +INFO:root:PassingDataObject: nmdc:2ae129ad2080fe90c19a19ac48f30d98 +INFO:root:PassingDataObject: nmdc:7927796fa6b25494c5297750965f1af0 +INFO:root:PassingDataObject: nmdc:78b58a3fff0a2d420169e513dfb14b1f +INFO:root:PassingDataObject: nmdc:f578f7e168c8154d297daf0d6acdabab +INFO:root:PassingDataObject: nmdc:eb7f0b67e547d28182387336f0f7f841 +INFO:root:PassingDataObject: nmdc:e4b1ed2c1410493d0e1c4828504a5d7b +INFO:root:PassingDataObject: nmdc:ee0d822c61b82d083a1868d4f3513e65 +INFO:root:PassingDataObject: nmdc:64485a70175bac037623b64ec2fbd3d6 +INFO:root:PassingDataObject: nmdc:0773d646ebaf28921a21794d6dbbe5d1 +INFO:root:PassingDataObject: nmdc:73ff5c2de09b32dc28ba5d946bc9b4cf +INFO:root:PassingDataObject: nmdc:84b82eb6ec05e634649b0b970401dd64 +INFO:root:PassingDataObject: nmdc:c572694233502e6f3e6f82b12e39a364 +INFO:root:PassingDataObject: nmdc:8314078a04727ae79b7ce2f3dfb218f6 +INFO:root:PassingDataObject: nmdc:5f8bd315cb56eaabfbcc743ea801dace +INFO:root:PassingDataObject: nmdc:30126e4508a76b784277b8332cbea3ca +INFO:root:PassingDataObject: nmdc:7b296f60865f4823402682bb990232dd +INFO:root:PassingDataObject: nmdc:ac820876e88591a7483c02ae6d5065ae +INFO:root:PassingDataObject: nmdc:48335a9b0d09068c9cd267f98421b59f +INFO:root:PassingDataObject: nmdc:0119bb020ab1f431fb529eec1b0ceacb +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:1a10a8b4212d28a45ec0411141ea8588 +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1a10a8b4212d28a45ec0411141ea8588, Annotation Activity for nmdc:mga00c4z05 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 4 +INFO:root:set_name: mags_activity_set for gold:Gp0452655 +INFO:root:found 4 records +INFO:root:record: nmdc:eebd8ca2bff072bd226d823403e71f03, MAGs Analysis Activity for nmdc:mga0652t21 +INFO:root:PassingDataObject: nmdc:4a564e1e5edd4454890665fb9cb910f0 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:eebd8ca2bff072bd226d823403e71f03 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:eebd8ca2bff072bd226d823403e71f03, MAGs Analysis Activity for nmdc:mga0652t21 +INFO:root:record: nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc, MAGs Analysis Activity for nmdc:mga054x719 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc +ERROR:root:FailedDataObject: nmdc:c0ca81496f77e125c0cb0e7294ba6f78, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc, MAGs Analysis Activity for nmdc:mga054x719 +INFO:root:record: nmdc:d2367fd701a924adc40a9f39eacf696c, MAGs Analysis Activity for nmdc:mga0ndba77 +INFO:root:PassingDataObject: nmdc:7d57712280afa1ba91a894aec6ad179f +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:d2367fd701a924adc40a9f39eacf696c +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d2367fd701a924adc40a9f39eacf696c, MAGs Analysis Activity for nmdc:mga0ndba77 +INFO:root:record: nmdc:1a10a8b4212d28a45ec0411141ea8588, MAGs Analysis Activity for nmdc:mga00c4z05 +INFO:root:PassingDataObject: nmdc:7d25329b8925dc9195bad30e6f5f9923 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1a10a8b4212d28a45ec0411141ea8588 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1a10a8b4212d28a45ec0411141ea8588, MAGs Analysis Activity for nmdc:mga00c4z05 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452655 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-fsedet70 +INFO:root:legacy_id: gold:Gp0452734 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-fsedet70 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:1599297c0a3e797f3b8b97ba9ebe6893 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452734 +INFO:root:found 1 records +INFO:root:record: nmdc:60de658acde8891ee55abe5f3c461667, Read QC Activity for nmdc:mga0y28044 +INFO:root:PassingDataObject: nmdc:b3733ccfeb21e127f186f2c72f628fa7 +INFO:root:PassingDataObject: nmdc:84901405d63789b4d9c47f7c59cfe441 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452734 +INFO:root:found 1 records +INFO:root:record: nmdc:60de658acde8891ee55abe5f3c461667, ReadBased Analysis Activity for nmdc:mga0y28044 +INFO:root:PassingDataObject: nmdc:893abd4886215972984a8dc078c334ee +INFO:root:PassingDataObject: nmdc:631dfad86e73e691e3203e1ad787cca3 +INFO:root:PassingDataObject: nmdc:1874ae32e22ac45f2fa5c65359c6d425 +INFO:root:PassingDataObject: nmdc:70ec08ab290c1ab388cb5558f943be56 +INFO:root:PassingDataObject: nmdc:538207f52988f9f83ff16872c15597e5 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:60de658acde8891ee55abe5f3c461667 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:60de658acde8891ee55abe5f3c461667 +ERROR:root:FailedDataObject: nmdc:c492208054eedd58c5d81d53fc7c5637, +ERROR:root:FailedDataObject: nmdc:33aea49a31cfd239fe4634d33084d2b3, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:60de658acde8891ee55abe5f3c461667, ReadBased Analysis Activity for nmdc:mga0y28044 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452734 +INFO:root:found 1 records +INFO:root:record: nmdc:60de658acde8891ee55abe5f3c461667, Assembly Activity for nmdc:mga0y28044 +INFO:root:PassingDataObject: nmdc:36d9ca01f89d96537e10d99a05a0337a +INFO:root:PassingDataObject: nmdc:676021bc154b6d11a15bc22a07518445 +INFO:root:PassingDataObject: nmdc:abf336f0c97e6b4e33f1fadb890ee6d5 +INFO:root:PassingDataObject: nmdc:7d54c33965e691dd55851c7561b1b239 +INFO:root:PassingDataObject: nmdc:1db64fb10a93548eaab510354b16759a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452734 +INFO:root:found 1 records +INFO:root:record: nmdc:60de658acde8891ee55abe5f3c461667, Annotation Activity for nmdc:mga0y28044 +INFO:root:PassingDataObject: nmdc:37732954599f4a4b0ae0c9f716535327 +INFO:root:PassingDataObject: nmdc:7aaf35cd13265b13608b2b7427734c12 +INFO:root:PassingDataObject: nmdc:435f720195ba04eb84c027ecaefb52a0 +INFO:root:PassingDataObject: nmdc:21701eed8947a36ff44cbbb9eaa8e013 +INFO:root:PassingDataObject: nmdc:6b196d49c47e05ee31697a629bf6c3a5 +INFO:root:PassingDataObject: nmdc:7d4d6160f852a065923ddf7d859a7c1d +INFO:root:PassingDataObject: nmdc:975a2f9a1b6f0ec805f2b6c13a7f8ab0 +INFO:root:PassingDataObject: nmdc:df8b641c95b039748e62aa3c99b1dd9b +INFO:root:PassingDataObject: nmdc:bfdf12611c2f032933606ff0fb611f17 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:60de658acde8891ee55abe5f3c461667 +ERROR:root:FailedDataObject: nmdc:22034f78a5dcb57a042ae2f9862428a6, +ERROR:root:FailedDataObject: nmdc:a0d821137de52115d1124175f9f7baca, +ERROR:root:FailedDataObject: nmdc:c2374d40317f65af1c472ab274e32542, +ERROR:root:FailedDataObject: nmdc:235fec278c71e76d79b82258ee50aa32, +ERROR:root:FailedDataObject: nmdc:130ed50a1bea74ca34894a72152fa50a, +ERROR:root:FailedDataObject: nmdc:7515e74c08112092bb1ca2b9d00d32c8, +ERROR:root:FailedDataObject: nmdc:75820fec8ec3df150500e59fb1868ce3, +ERROR:root:failing_data_objects: 16 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:60de658acde8891ee55abe5f3c461667, Annotation Activity for nmdc:mga0y28044 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452734 +INFO:root:found 1 records +INFO:root:record: nmdc:60de658acde8891ee55abe5f3c461667, MAGs Analysis Activity for nmdc:mga0y28044 +INFO:root:PassingDataObject: nmdc:871646887763d7473947d40b76f44bf6 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:60de658acde8891ee55abe5f3c461667 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:60de658acde8891ee55abe5f3c461667, MAGs Analysis Activity for nmdc:mga0y28044 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452734 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-gg86mj11 +INFO:root:legacy_id: gold:Gp0452747 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gg86mj11 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:3ce1bba85de2dc1268c349d1d5c72aca +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:432f3e0593018277f165103287a2d905 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452747 +INFO:root:found 2 records +INFO:root:record: nmdc:5c7dbe7883c4de3156d067584c0f07b8, Read QC Activity for nmdc:mga0e23n82 +INFO:root:PassingDataObject: nmdc:e96bf5579ed24288eb509ef3c39274b5 +INFO:root:PassingDataObject: nmdc:e7691dea0dece87127c0febadec2dd80 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:8f9c43526ea1d821cb77d060a9391a26, Read QC Activity for nmdc:mga0mj7a82 +INFO:root:PassingDataObject: nmdc:412f21709762d323c685d582ed09b734 +INFO:root:PassingDataObject: nmdc:5ef2664a47ab117e11b98c4576613a25 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452747 +INFO:root:found 2 records +INFO:root:record: nmdc:5c7dbe7883c4de3156d067584c0f07b8, ReadBased Analysis Activity for nmdc:mga0e23n82 +INFO:root:PassingDataObject: nmdc:cfbcc21dba03cab390a47e3b37314946 +INFO:root:PassingDataObject: nmdc:f0de3f5e445418aa678550e9751c5f12 +INFO:root:PassingDataObject: nmdc:9338ebb3c21a734cd55b09fafeb2bfd3 +INFO:root:PassingDataObject: nmdc:e361fee3cd946af28417ff1ee65b3215 +INFO:root:PassingDataObject: nmdc:0075743f35a38ef33f5dc12faca571b9 +INFO:root:PassingDataObject: nmdc:d49fe2adb6a793ca816d31acae6d0584 +INFO:root:PassingDataObject: nmdc:46a582d49db3ffaee42036e5bc188f3e +INFO:root:PassingDataObject: nmdc:629ea929bb1a0766d6a348abcc3858e8 +INFO:root:PassingDataObject: nmdc:a3273aa5ffa411774651cbe6fa34e56c +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:8f9c43526ea1d821cb77d060a9391a26, ReadBased Analysis Activity for nmdc:mga0mj7a82 +INFO:root:PassingDataObject: nmdc:a6a824b0260d240b3c1ae45b67b1ab7a +INFO:root:PassingDataObject: nmdc:c0e14720a481a9d102767022a77080cf +INFO:root:PassingDataObject: nmdc:b97aed60d834b2568fe9105f1d3b2c80 +INFO:root:PassingDataObject: nmdc:259328571bc09098dab9bbf772fadfeb +INFO:root:PassingDataObject: nmdc:6b802cedfc3cdf775e61f4611e0205e7 +INFO:root:PassingDataObject: nmdc:890394a54e814762165fba7237976762 +INFO:root:PassingDataObject: nmdc:f235810f93c0b5b2c5237b5c83c63345 +INFO:root:PassingDataObject: nmdc:afff8c15ee07b1d35e40ba9058d31427 +INFO:root:PassingDataObject: nmdc:60bd2eb983808eff315eb440fb971707 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452747 +INFO:root:found 2 records +INFO:root:record: nmdc:5c7dbe7883c4de3156d067584c0f07b8, Assembly Activity for nmdc:mga0e23n82 +INFO:root:PassingDataObject: nmdc:d4e55ab92fb0a5214ab666a197abf070 +INFO:root:PassingDataObject: nmdc:b5aaff3e4ca42844857aa50c6ba8e0bd +INFO:root:PassingDataObject: nmdc:646b1953875a275ba502531aa2670a30 +INFO:root:PassingDataObject: nmdc:6aa080590bb1e813b429eb344f7b5fb5 +INFO:root:PassingDataObject: nmdc:6ab7ebcf15c4727d7135d8c3021f6422 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:8f9c43526ea1d821cb77d060a9391a26, Assembly Activity for nmdc:mga0mj7a82 +INFO:root:PassingDataObject: nmdc:5cc821a68f4e8fe162c033e9c2427f67 +INFO:root:PassingDataObject: nmdc:2d7824e88343756a781560811adcef00 +INFO:root:PassingDataObject: nmdc:e2b8451a38ba15c192b35653f226e70c +INFO:root:PassingDataObject: nmdc:8e12e27d39a95336528deca0aae85fbb +INFO:root:PassingDataObject: nmdc:b4afa3369a27c41d50b04e3aa515217f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452747 +INFO:root:found 2 records +INFO:root:record: nmdc:5c7dbe7883c4de3156d067584c0f07b8, Annotation Activity for nmdc:mga0e23n82 +INFO:root:PassingDataObject: nmdc:ab6459d9dbd936268d611e264c095a0b +INFO:root:PassingDataObject: nmdc:d20bd1a6f0a2c495b12a4a82a9ae3f86 +INFO:root:PassingDataObject: nmdc:1fb477c8f27e2bd1f338041a391041e9 +INFO:root:PassingDataObject: nmdc:c91e7667ced66fbc247d8f2684350206 +INFO:root:PassingDataObject: nmdc:cff7bae603223c74db157d8ec292fe24 +INFO:root:PassingDataObject: nmdc:4ff6af7558358295bbf8647d3117a357 +INFO:root:PassingDataObject: nmdc:d5f7a60dc04c761443be440e11c6ea3b +INFO:root:PassingDataObject: nmdc:5b8e5a3038d513e1db5eb021d7153eca +INFO:root:PassingDataObject: nmdc:c864d807df702311c6f358afcb7a2a4b +INFO:root:PassingDataObject: nmdc:de48efcfb234c26c3bca1ca09d52c7e4 +INFO:root:PassingDataObject: nmdc:75b64bf450f1029944ea0cc4fefc8428 +INFO:root:PassingDataObject: nmdc:703cf48772f4a5b878c288f587e13ff0 +INFO:root:PassingDataObject: nmdc:69b68c2026728cb02b252dbd48c5a696 +INFO:root:PassingDataObject: nmdc:a78aa3b07ea7a5c56303adfa19530420 +INFO:root:PassingDataObject: nmdc:25348c451b93eca8ef647a8cfcc0b39e +INFO:root:PassingDataObject: nmdc:cb1bb576796b5e0b3c9206fd6f80da08 +INFO:root:PassingDataObject: nmdc:3f36e5cea4e5273f888eea30574763af +INFO:root:PassingDataObject: nmdc:53ffc0262138576bd0196759965b0edd +INFO:root:PassingDataObject: nmdc:be81a685edee23de715be6166ba1bb5d +INFO:root:PassingDataObject: nmdc:fe1229e3148cf60f7dad0e7a2a9cdf98 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:5c7dbe7883c4de3156d067584c0f07b8 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5c7dbe7883c4de3156d067584c0f07b8, Annotation Activity for nmdc:mga0e23n82 +INFO:root:record: nmdc:8f9c43526ea1d821cb77d060a9391a26, Annotation Activity for nmdc:mga0mj7a82 +INFO:root:PassingDataObject: nmdc:c36255133e758941822a8f474d6aee3a +INFO:root:PassingDataObject: nmdc:c6b980107c5a928dc379c3b899bdba1f +INFO:root:PassingDataObject: nmdc:636053e8e61b243e806b80bd193e7283 +INFO:root:PassingDataObject: nmdc:5e1cf611e2217a8ab143053373af4424 +INFO:root:PassingDataObject: nmdc:9c7644f7d1021d6c2225f0881f41097d +INFO:root:PassingDataObject: nmdc:766ece9c5044e22695f02f101933756a +INFO:root:PassingDataObject: nmdc:6396362bb6a381f12c7ef128757e52dd +INFO:root:PassingDataObject: nmdc:f7b18f4c22344457824272f88b4d7af7 +INFO:root:PassingDataObject: nmdc:08e83b2f8966bf103aab846d1ed1868c +INFO:root:PassingDataObject: nmdc:09f97b3e9cc0fadb03386e60e07f6ba2 +INFO:root:PassingDataObject: nmdc:04467e77700502cecb1130281e200813 +INFO:root:PassingDataObject: nmdc:99c758fe93fa562e9bb35110ebc1e8ee +INFO:root:PassingDataObject: nmdc:bcc904f7debef010a1e3a911648b82f4 +INFO:root:PassingDataObject: nmdc:bc6d12b21023d8134e4153036dc690d7 +INFO:root:PassingDataObject: nmdc:5c846131279e4973a95e82fafcab5a69 +INFO:root:PassingDataObject: nmdc:7e9774c0f63b271c62462906f44ea9cd +INFO:root:PassingDataObject: nmdc:e8419f0fbe87fbc0a942a0f4e9c5f6ce +INFO:root:PassingDataObject: nmdc:6c2d6bab64c456bdeb4605de93e17b9d +INFO:root:PassingDataObject: nmdc:75607b15ffe27e56d8eebeaf05826b8e +INFO:root:PassingDataObject: nmdc:484d0f6685ac69e6984c8be9d8c6280a +INFO:root:PassingDataObject: nmdc:4e634d1e3f8838be9a1e2b483afb4cd2 +INFO:root:PassingDataObject: nmdc:3a4919d6247bb56765c0a75ed0e9008c +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452747 +INFO:root:found 2 records +INFO:root:record: nmdc:5c7dbe7883c4de3156d067584c0f07b8, MAGs Analysis Activity for nmdc:mga0e23n82 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5c7dbe7883c4de3156d067584c0f07b8 +ERROR:root:FailedDataObject: nmdc:73c93d913ccf43f81e19bddfeeea9f7f, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5c7dbe7883c4de3156d067584c0f07b8, MAGs Analysis Activity for nmdc:mga0e23n82 +INFO:root:record: nmdc:8f9c43526ea1d821cb77d060a9391a26, MAGs Analysis Activity for nmdc:mga0mj7a82 +INFO:root:PassingDataObject: nmdc:a64a4fa9d16da5bc507daefcc8d7b70b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:8f9c43526ea1d821cb77d060a9391a26 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:8f9c43526ea1d821cb77d060a9391a26, MAGs Analysis Activity for nmdc:mga0mj7a82 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452747 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-q8rgev87 +INFO:root:legacy_id: gold:Gp0452642 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-q8rgev87 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7c01a701579e935feb000dd58326161b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2a76db57a9c7c23a383abc0c038d55f8 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8df75bcfcf3afcc9ebb15cfe70367478 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452642 +INFO:root:found 3 records +INFO:root:record: nmdc:ad819a915c7e51a8c43c117f09881589, Read QC Activity for nmdc:mga0z1yd49 +INFO:root:PassingDataObject: nmdc:15fad4f99576b149b74d49e4826c1c89 +INFO:root:PassingDataObject: nmdc:f448af779b6ae17e0c47608afc5aeef4 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25, Read QC Activity for nmdc:mga01r1q76 +INFO:root:PassingDataObject: nmdc:f79c5c356aadf2e239a4f7acc540691f +INFO:root:PassingDataObject: nmdc:2880571759b56dd0ef6492ceb8044d0e +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1, Read QC Activity for nmdc:mga0rxeh54 +INFO:root:PassingDataObject: nmdc:7188c556a6a5e66d8290959dbe96e33b +INFO:root:PassingDataObject: nmdc:6cbb67499dcdad2784eb3869c4646f95 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452642 +INFO:root:found 3 records +INFO:root:record: nmdc:ad819a915c7e51a8c43c117f09881589, ReadBased Analysis Activity for nmdc:mga0z1yd49 +INFO:root:PassingDataObject: nmdc:7ba392ee4b9834ae0ebbe542cf3856cb +INFO:root:PassingDataObject: nmdc:47471ff42029fdd864f1b8f5ef2981bf +INFO:root:PassingDataObject: nmdc:b111a42009e317b20eb71e740a96b53e +INFO:root:PassingDataObject: nmdc:ea92f654e1dd799cec71a056a77f92c2 +INFO:root:PassingDataObject: nmdc:b160462e75a38ecec1f695640cbaa511 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:ad819a915c7e51a8c43c117f09881589 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:ad819a915c7e51a8c43c117f09881589 +ERROR:root:FailedDataObject: nmdc:608f9115b75792076cd859ba89eeb575, +ERROR:root:FailedDataObject: nmdc:6bcca034feb0c9befe913457294d70fd, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ad819a915c7e51a8c43c117f09881589, ReadBased Analysis Activity for nmdc:mga0z1yd49 +INFO:root:record: nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25, ReadBased Analysis Activity for nmdc:mga01r1q76 +INFO:root:PassingDataObject: nmdc:1860646805b180d7d250b73df853ac01 +INFO:root:PassingDataObject: nmdc:c64ba329deaca29b573ebbaf33442acd +INFO:root:PassingDataObject: nmdc:13c4b596daeddfedcee4d532c634821d +INFO:root:PassingDataObject: nmdc:1bc7028aafbb8b45ef0847b45a797a27 +INFO:root:PassingDataObject: nmdc:4097fc2af94d8cffe143e0e562ab0351 +INFO:root:PassingDataObject: nmdc:6307f51690e9d5c4dab9de64c60325a1 +INFO:root:PassingDataObject: nmdc:e8249009058ce1103ece98dcbd2ee576 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25 +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25, ReadBased Analysis Activity for nmdc:mga01r1q76 +INFO:root:record: nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1, ReadBased Analysis Activity for nmdc:mga0rxeh54 +INFO:root:PassingDataObject: nmdc:e5c0b6f7399d24c3ad3393a062e7d381 +INFO:root:PassingDataObject: nmdc:8d59a8e67ceedd8a366a4bc98eac1cd2 +INFO:root:PassingDataObject: nmdc:f324286c9d08dd2250edf696052b1746 +INFO:root:PassingDataObject: nmdc:a338e0d04437075287d590ded9ae9e21 +INFO:root:PassingDataObject: nmdc:19ae0f643af2a8e23fe9a7187586d112 +INFO:root:PassingDataObject: nmdc:cbe4ff8f28ee2c016e95c44afad26783 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1 +ERROR:root:FailedDataObject: nmdc:c07756ae161a56d6a291bced81a74111, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1, ReadBased Analysis Activity for nmdc:mga0rxeh54 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452642 +INFO:root:found 3 records +INFO:root:record: nmdc:ad819a915c7e51a8c43c117f09881589, Assembly Activity for nmdc:mga0z1yd49 +INFO:root:PassingDataObject: nmdc:559346a186d947b38cb954b4f025ea46 +INFO:root:PassingDataObject: nmdc:c278e4cf5067171f85e64f6d62ddb279 +INFO:root:PassingDataObject: nmdc:822dde295ab24bc74b2707d78cd8f05e +INFO:root:PassingDataObject: nmdc:786ff1f4189b7c261056cf07ade9e96e +INFO:root:PassingDataObject: nmdc:7fda85f61d70f91ff66cb5317ebbb694 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25, Assembly Activity for nmdc:mga01r1q76 +INFO:root:PassingDataObject: nmdc:07a358e06573354610ee1d406ec2835f +INFO:root:PassingDataObject: nmdc:eaca5c8e778f7f1bb2abf788b7cf481d +INFO:root:PassingDataObject: nmdc:fc14c3b92710d4545136ee0a5f1cd682 +INFO:root:PassingDataObject: nmdc:a2c75206eb46ada6570f08b8e133ff64 +INFO:root:PassingDataObject: nmdc:15291ac5f4202f205e15fa5f92a21985 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1, Assembly Activity for nmdc:mga0rxeh54 +INFO:root:PassingDataObject: nmdc:ef711388214bf40d64c0e3e67acbc301 +INFO:root:PassingDataObject: nmdc:b5967341f194fbf4e2d93c6ab8723726 +INFO:root:PassingDataObject: nmdc:5605363fd902d7a6f7dc847d89330650 +INFO:root:PassingDataObject: nmdc:13f33be821b55f9b7f2f3d1920479448 +INFO:root:PassingDataObject: nmdc:237c753ff5b7c79200e29abb03560db5 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452642 +INFO:root:found 3 records +INFO:root:record: nmdc:ad819a915c7e51a8c43c117f09881589, Annotation Activity for nmdc:mga0z1yd49 +INFO:root:PassingDataObject: nmdc:3ce809ba75134e85e7253b5823fe4af3 +INFO:root:PassingDataObject: nmdc:3ff3d4ff277320b2e7d7af118f319904 +INFO:root:PassingDataObject: nmdc:82261cb5ef96aa94409780385729c378 +INFO:root:PassingDataObject: nmdc:095521a4103acda81d2f5c502d17223f +INFO:root:PassingDataObject: nmdc:12c535de713ead02c8e64ef7abbe89df +INFO:root:PassingDataObject: nmdc:08ce77f57f6edb8fa35a4130ec7c04cd +INFO:root:PassingDataObject: nmdc:06dbe7cb659f0ae6535a7852a97bef74 +INFO:root:PassingDataObject: nmdc:eaa7af1d734b159470693971760fd1c7 +INFO:root:PassingDataObject: nmdc:d1b1d18b5e5ef1834bc2b2a3cbcd6df9 +INFO:root:PassingDataObject: nmdc:79034590d27515be49931e1e59529665 +INFO:root:PassingDataObject: nmdc:5c918a8e06b12f2d841389ad8cc5ab67 +INFO:root:PassingDataObject: nmdc:97d4799c80b00bf6a6c46db21481196a +INFO:root:PassingDataObject: nmdc:f2cde5dcc185b61c1e0da0aa0b8dfa1b +INFO:root:PassingDataObject: nmdc:e1dfe9e8a623ce179d1710a886fa0b12 +INFO:root:PassingDataObject: nmdc:946356568067c35b1ac12aff455e1f05 +INFO:root:PassingDataObject: nmdc:3507d16f98cc1e1b68e52f0939aa8fda +INFO:root:PassingDataObject: nmdc:8a3667c93111598473c1eaf923cb73d8 +INFO:root:PassingDataObject: nmdc:9976ac9760c87f3ba52bcfd13c3f101a +INFO:root:PassingDataObject: nmdc:4d8952dceb1c470f0006acb763f050d4 +INFO:root:PassingDataObject: nmdc:2153123ad917f9ad781e6f7e1c3b1e85 +INFO:root:PassingDataObject: nmdc:66eee7fa8028793efffb9b55c10f8aaa +INFO:root:PassingDataObject: nmdc:e39c5ff55294473ffac86aa4c099a4bb +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25, Annotation Activity for nmdc:mga01r1q76 +INFO:root:PassingDataObject: nmdc:7dfaf0c0391159b6dcb7c0dc4a5d2b24 +INFO:root:PassingDataObject: nmdc:f5898ce3b26430314b9bc684872af44a +INFO:root:PassingDataObject: nmdc:a4c56a5c6c8c6ee14990bd8df63ade3e +INFO:root:PassingDataObject: nmdc:787f669f36fea6dce69fe1814a19d8fd +INFO:root:PassingDataObject: nmdc:5a68954e787551b1929d909bdc6cba76 +INFO:root:PassingDataObject: nmdc:7107cf95f0cb3850a11e9792e06827ea +INFO:root:PassingDataObject: nmdc:a851e1f3ac31ac44a1424cd9551dbfef +INFO:root:PassingDataObject: nmdc:8a0c33e94a319dbf1dbf6db5db5f9d76 +INFO:root:PassingDataObject: nmdc:76be616fd1fe646a95eceb5f7e88a54a +INFO:root:PassingDataObject: nmdc:e401de86364eef3b973252c354592c13 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25 +ERROR:root:FailedDataObject: nmdc:0fc3bbcf3b2408602b01ade45023a0a5, +ERROR:root:FailedDataObject: nmdc:970426acb29a0feb956127ae93880c13, +ERROR:root:failing_data_objects: 12 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25, Annotation Activity for nmdc:mga01r1q76 +INFO:root:record: nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1, Annotation Activity for nmdc:mga0rxeh54 +INFO:root:PassingDataObject: nmdc:aa3ff2949c3cfe0f9e01ed641f659343 +INFO:root:PassingDataObject: nmdc:d3772e3373fc89ef8640d4146394355c +INFO:root:PassingDataObject: nmdc:fed5680bdf5a22ac64ee9c5a1eef02ce +INFO:root:PassingDataObject: nmdc:af20ddf66df28219e1bedcc328071ccf +INFO:root:PassingDataObject: nmdc:f71114771b181adb88d6ae48c76f812e +INFO:root:PassingDataObject: nmdc:55c7cca2e7f032be768df1a0ac8985a8 +INFO:root:PassingDataObject: nmdc:cc7045ce23dfa1883437f1cbda5a5690 +INFO:root:PassingDataObject: nmdc:a9c16dafa72a507ed3ba898a0a329d02 +INFO:root:PassingDataObject: nmdc:abbc0bf955fa7c4d98bc6e745a8810ce +INFO:root:PassingDataObject: nmdc:af40a6ee6bc23dfd58750e479d18a58c +INFO:root:PassingDataObject: nmdc:0317926846155d4238969c860e8930c9 +INFO:root:PassingDataObject: nmdc:5c84a128b7ecb097b6cfc83da4e27ff3 +INFO:root:PassingDataObject: nmdc:925c076be021bd266fca0c6edd9e1402 +INFO:root:PassingDataObject: nmdc:eaafa4f586cde5359492c1d2289aed78 +INFO:root:PassingDataObject: nmdc:a6f791f82ff542f50cb4f7fdbee92308 +INFO:root:PassingDataObject: nmdc:06a3ffcfdb7565a2b2a531fa07c319a7 +INFO:root:PassingDataObject: nmdc:0bb58d7084ab9c11e4d01e4c00e21cc2 +INFO:root:PassingDataObject: nmdc:66f4a8c3241fabfee8cd881ac6b01abd +INFO:root:PassingDataObject: nmdc:b8c0674d47cc72b2c82fb91bba2a11f9 +INFO:root:PassingDataObject: nmdc:180f7c61f775e5fb10fee49192155ad8 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1, Annotation Activity for nmdc:mga0rxeh54 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452642 +INFO:root:found 3 records +INFO:root:record: nmdc:ad819a915c7e51a8c43c117f09881589, MAGs Analysis Activity for nmdc:mga0z1yd49 +INFO:root:PassingDataObject: nmdc:2c9665ae473197484775111a00a11ae4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:ad819a915c7e51a8c43c117f09881589 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ad819a915c7e51a8c43c117f09881589, MAGs Analysis Activity for nmdc:mga0z1yd49 +INFO:root:record: nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25, MAGs Analysis Activity for nmdc:mga01r1q76 +INFO:root:PassingDataObject: nmdc:4ca08ecff87f83e67a98da6de1e7ef60 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2b1c16d0c74bf4f54a0ec83edb8ffc25, MAGs Analysis Activity for nmdc:mga01r1q76 +INFO:root:record: nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1, MAGs Analysis Activity for nmdc:mga0rxeh54 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1 +ERROR:root:FailedDataObject: nmdc:a7cfcdc9f9eea0ad501fb527fc5614fa, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0ca3cd8193d2bd03fa2497dbedefc5b1, MAGs Analysis Activity for nmdc:mga0rxeh54 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452642 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-x0n04t71 +INFO:root:legacy_id: gold:Gp0452720 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-x0n04t71 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b6190c9b320e4fc4c91ff7e618cd347e +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:32b6db08f1adae7819c62728d4ce6f34 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452720 +INFO:root:found 2 records +INFO:root:record: nmdc:8136b3e42d0d1ea7927647e03ee91d70, Read QC Activity for nmdc:mga09yrm53 +INFO:root:PassingDataObject: nmdc:42f7e73864a6bb9e83484df398fa42a5 +INFO:root:PassingDataObject: nmdc:3fa07760352da0824bee7495d8373ace +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:8a9b8d7e9352b76b70eae03ee4786df2, Read QC Activity for nmdc:mga0xbeg42 +INFO:root:PassingDataObject: nmdc:03125a7ec4a8e18ab8efc4143278042b +INFO:root:PassingDataObject: nmdc:7ea1e731921377d7166f677f5da73ec9 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452720 +INFO:root:found 2 records +INFO:root:record: nmdc:8136b3e42d0d1ea7927647e03ee91d70, ReadBased Analysis Activity for nmdc:mga09yrm53 +INFO:root:PassingDataObject: nmdc:c80e68600db8d0e3f10768144448f756 +INFO:root:PassingDataObject: nmdc:9d19cb1613ae856f6b43b8db487721db +INFO:root:PassingDataObject: nmdc:3ac273cf2c8434fab72aa2c1a95a9871 +INFO:root:PassingDataObject: nmdc:f3235873d736a6383a2e0811f930b1bb +INFO:root:PassingDataObject: nmdc:a50806e62e08db06f2c874eba36ea782 +INFO:root:PassingDataObject: nmdc:a3137830cd9d5b33329eeb333d311825 +INFO:root:PassingDataObject: nmdc:d788d0e0f17d385093937f828c0f3419 +INFO:root:PassingDataObject: nmdc:0d6c9e180c57852815cc09845295dade +INFO:root:PassingDataObject: nmdc:b0dbf86f4711cd328bb32b7135451525 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:8a9b8d7e9352b76b70eae03ee4786df2, ReadBased Analysis Activity for nmdc:mga0xbeg42 +INFO:root:PassingDataObject: nmdc:619ada62114158dfa0463038678061ce +INFO:root:PassingDataObject: nmdc:0a2e240a0b1cefb87a6dd62e9ae4eb6a +INFO:root:PassingDataObject: nmdc:de4966f2188854d66c8a339cfb1f318a +INFO:root:PassingDataObject: nmdc:2dba303fa913ee1b0f7e431e045df605 +INFO:root:PassingDataObject: nmdc:d58efd2200f612c44917c0ca17639ce6 +INFO:root:PassingDataObject: nmdc:034fe2e0b93c2bddfbeab07338dc27f3 +INFO:root:PassingDataObject: nmdc:636c760560ae210f0634a58911741683 +INFO:root:PassingDataObject: nmdc:87bbe405749b31bbebfbcbc5d3ae40e3 +INFO:root:PassingDataObject: nmdc:91b46085d5cc42c0f988298927b21037 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452720 +INFO:root:found 2 records +INFO:root:record: nmdc:8a9b8d7e9352b76b70eae03ee4786df2, Assembly Activity for nmdc:mga0xbeg42 +INFO:root:PassingDataObject: nmdc:0334994ae593fd3dddd15731c373ceb6 +INFO:root:PassingDataObject: nmdc:4de3e733ceaab83f36788108db5cd908 +INFO:root:PassingDataObject: nmdc:b75311c0ec3092f21cc0bbd88c2a091a +INFO:root:PassingDataObject: nmdc:ac259364b37d1c96a0d219d3a6802596 +INFO:root:PassingDataObject: nmdc:6e94c985252e741f6f89ee5cfc68dd74 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:8136b3e42d0d1ea7927647e03ee91d70, Assembly Activity for nmdc:mga09yrm53 +INFO:root:PassingDataObject: nmdc:b3702e220eecb44e833f808784756893 +INFO:root:PassingDataObject: nmdc:5a5807071ece672b6a6d1e96333a70e0 +INFO:root:PassingDataObject: nmdc:87d852e9db4c3b2d769efb09f9133eeb +INFO:root:PassingDataObject: nmdc:d527b1e6944667434e3f889c6d8fe4bf +INFO:root:PassingDataObject: nmdc:3268db037345fc2cc699035420fe17f9 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452720 +INFO:root:found 2 records +INFO:root:record: nmdc:8136b3e42d0d1ea7927647e03ee91d70, Annotation Activity for nmdc:mga09yrm53 +INFO:root:PassingDataObject: nmdc:21b5a17c8f91d28764a49cf8f955bddd +INFO:root:PassingDataObject: nmdc:a6311258b736191d20473121ac96f39a +INFO:root:PassingDataObject: nmdc:25a5d7f9ba34ecc9b065d805cde8f818 +INFO:root:PassingDataObject: nmdc:b998cfb9e6473fd8a6b9a75f2714c2b5 +INFO:root:PassingDataObject: nmdc:b5e0e41921f8b7223aa94d96a5f69f31 +INFO:root:PassingDataObject: nmdc:7793c268e4339f0f002cbecd6e14cdf4 +INFO:root:PassingDataObject: nmdc:b604b68aabf2fb4045e531097629526c +INFO:root:PassingDataObject: nmdc:6aa0d1704db08407031dfd0237d49010 +INFO:root:PassingDataObject: nmdc:ff20f3d060fc7d7f71adcff274b64434 +INFO:root:PassingDataObject: nmdc:b6f5fbb02c2a107e802124fa97f52567 +INFO:root:PassingDataObject: nmdc:dddcf58abea18810120ef714ff9ae1f0 +INFO:root:PassingDataObject: nmdc:643ef0b3b1482c1818375830f9c2e59e +INFO:root:PassingDataObject: nmdc:e3e9f2b1c79a2e989d7fbd6e7fa35b0c +INFO:root:PassingDataObject: nmdc:1d32ff53caa219906a6bf5b27843b278 +INFO:root:PassingDataObject: nmdc:87742ba10e99a9130f991b48b0869f4e +INFO:root:PassingDataObject: nmdc:f83c486776023c2adcef7bd49d429b11 +INFO:root:PassingDataObject: nmdc:8c2532f4dd5c1ecd9c7f3700ffc59fe9 +INFO:root:PassingDataObject: nmdc:756db1a4c6a5a89f54beaa40489e47b5 +INFO:root:PassingDataObject: nmdc:74c7b74d77926c50671ec7901de5a049 +INFO:root:PassingDataObject: nmdc:e47a0f32c3fd8df0dc2bc170b53eb73e +INFO:root:PassingDataObject: nmdc:ffd6429e99aa35329055e5e22e8f150e +INFO:root:PassingDataObject: nmdc:b06a0e6e3ea5af8f80f02e7ae0b351fd +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:8a9b8d7e9352b76b70eae03ee4786df2, Annotation Activity for nmdc:mga0xbeg42 +INFO:root:PassingDataObject: nmdc:0375cb137a76039e813947c1f7269a3f +INFO:root:PassingDataObject: nmdc:42f9486975d2097624f7217971584388 +INFO:root:PassingDataObject: nmdc:5a39555c3a139b9d2cbd2254899e332b +INFO:root:PassingDataObject: nmdc:87121d35fb311aab9289d75df10146cb +INFO:root:PassingDataObject: nmdc:f6b5440ed3ca1b13bc7db9a11f80a06e +INFO:root:PassingDataObject: nmdc:1e473db6dccfca5225f63e14180b4879 +INFO:root:PassingDataObject: nmdc:ac75895f69b72d66d347422017bb6d9d +INFO:root:PassingDataObject: nmdc:a8473c26866ab08f7ce576496d9a6899 +INFO:root:PassingDataObject: nmdc:dc557f30b7d6a6b24d0d0f26b02b13ad +INFO:root:PassingDataObject: nmdc:7313f10afb9f29efdcca9f0c59137eb5 +INFO:root:PassingDataObject: nmdc:fd1e8517555eaf0f2587718958a73ab9 +INFO:root:PassingDataObject: nmdc:d0a232b8a0b0db8e24ca69b767207bd2 +INFO:root:PassingDataObject: nmdc:73c96abeb99a04fbe80fa7dbaf655cd8 +INFO:root:PassingDataObject: nmdc:bd5ef36a993f1b42dcd2bfcf0324b044 +INFO:root:PassingDataObject: nmdc:ab1a3fb7a30503a11ba2286745f9b7c4 +INFO:root:PassingDataObject: nmdc:1c54d3994e70af88d5419ae0ae9f936d +INFO:root:PassingDataObject: nmdc:893f7165f9593f842882071d1aa31ff2 +INFO:root:PassingDataObject: nmdc:7a16f766027266032314abb1178342f6 +INFO:root:PassingDataObject: nmdc:040f911f81f8676fdc099ec77a3942ff +INFO:root:PassingDataObject: nmdc:aa3daf25bd3896dbbad11132486f1a40 +INFO:root:PassingDataObject: nmdc:3b0e496e82f0a7d4baf8c1e76fdc8a6f +INFO:root:PassingDataObject: nmdc:aeb1c609da045725cbe0da0e3ee95dc9 +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452720 +INFO:root:found 2 records +INFO:root:record: nmdc:8136b3e42d0d1ea7927647e03ee91d70, MAGs Analysis Activity for nmdc:mga09yrm53 +INFO:root:PassingDataObject: nmdc:b61dac0e17d54d53d987a8515245bff2 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:8136b3e42d0d1ea7927647e03ee91d70 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:8136b3e42d0d1ea7927647e03ee91d70, MAGs Analysis Activity for nmdc:mga09yrm53 +INFO:root:record: nmdc:8a9b8d7e9352b76b70eae03ee4786df2, MAGs Analysis Activity for nmdc:mga0xbeg42 +INFO:root:PassingDataObject: nmdc:1dd6f4da00585325ed0e9d779105cdb7 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:8a9b8d7e9352b76b70eae03ee4786df2 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:8a9b8d7e9352b76b70eae03ee4786df2, MAGs Analysis Activity for nmdc:mga0xbeg42 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452720 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-tdt0js09 +INFO:root:legacy_id: gold:Gp0452741 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-tdt0js09 +ERROR:root:OmicsProcessingOrphanDataObject: nmdc:8a9d164e1310e5b838d6ceb492f64a61 for nmdc:omprc-11-tdt0js09 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9bd3cf378610c02776b54cc797d8c07a +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9d5f99fba241d6bdd933ccbf405bf872 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452741 +INFO:root:found 3 records +INFO:root:record: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Read QC Activity for nmdc:mga0ckxp56 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Read QC Activity for nmdc:mga0ckxp56 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:91eea91576d2f8c69988dc5970f1015d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5fa392254468ece52e1d0c02ba23bebd,, +ERROR:root:failing_data_objects: 2 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Read QC Activity for nmdc:mga0ckxp56 +INFO:root:record: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Read QC Activity for nmdc:mga07h8z62 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Read QC Activity for nmdc:mga07h8z62 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a4c89737d1c45b6e157ab41c8deceb7a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b6bbc3b78a47190c5cae22e625475c1f,, +ERROR:root:failing_data_objects: 2 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Read QC Activity for nmdc:mga07h8z62 +INFO:root:record: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Read QC Activity for nmdc:mga0s1mr70 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Read QC Activity for nmdc:mga0s1mr70 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5c6a6b9b0a07d0530cc3baa4d4af2273,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:035f22c1d4caa1a96cb73bbd1bad58d0,, +ERROR:root:failing_data_objects: 2 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Read QC Activity for nmdc:mga0s1mr70 +ERROR:root:FailedRecords: read_qc_analysis_activity_set, 6 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452741 +INFO:root:found 3 records +INFO:root:record: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, ReadBased Analysis Activity for nmdc:mga07h8z62 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, ReadBased Analysis Activity for nmdc:mga07h8z62 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:46db5d0aca98d1ca9e69847fcb508b62,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c3403804bd25614131f1c5a372224a7f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f583fbdab2db714cdbcc519c147ef5ee,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ba2d9a84413ea3c59e1b18264b058ca5,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:94b3f40bc85c3301306bf718465612aa,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:aa4c18278d7352e3a9415022e85e4135,, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:c3d8c8dbbb328f6dc9e471a9b6363902 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:c3d8c8dbbb328f6dc9e471a9b6363902 +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5ed6a2408b00fa5c917689526e504db3,, +ERROR:root:failing_data_objects: 7 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, ReadBased Analysis Activity for nmdc:mga07h8z62 +INFO:root:record: nmdc:29fdf5eeec3f230d578cc495d517a0f6, ReadBased Analysis Activity for nmdc:mga0ckxp56 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, ReadBased Analysis Activity for nmdc:mga0ckxp56 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0129ea142a36dc70859dc866474994b7,, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:29fdf5eeec3f230d578cc495d517a0f6 +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:03ece261b52fc38f8a1aa02ba4a573af,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ab31d224bd54b8dfb3b23411dc98c28c,, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:29fdf5eeec3f230d578cc495d517a0f6 +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a642b12c31b33a8968853f6685e920d0,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2ed12bdab0f98f960be15eb8bb6170b7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:89b1684c87797aece91045e1d49a531a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3353e8981c71acd91a26a36283b8d3df,, +ERROR:root:failing_data_objects: 7 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, ReadBased Analysis Activity for nmdc:mga0ckxp56 +INFO:root:record: nmdc:1849f5f6f6bd21c60071384b226ab8d2, ReadBased Analysis Activity for nmdc:mga0s1mr70 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, ReadBased Analysis Activity for nmdc:mga0s1mr70 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:149c6a5a3f91eff078f2f3bfcf8c4442,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fbb988153849cdbe866f49844054bee6,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:502b3f44de7cfa1cf784cfffef42ecb9,, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:1849f5f6f6bd21c60071384b226ab8d2 +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:51e6395bdc8094b6f845fbe9f912e3e9,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ab407f9ed54870cd705ba55a78013b66,, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:1849f5f6f6bd21c60071384b226ab8d2 +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:79248ab0557ba0cd5950b3e20cf7bab8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6f8ee1a9cca364fd14fb664fc054d08a,, +ERROR:root:failing_data_objects: 7 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, ReadBased Analysis Activity for nmdc:mga0s1mr70 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 6 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452741 +INFO:root:found 3 records +INFO:root:record: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Assembly Activity for nmdc:mga0ckxp56 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Assembly Activity for nmdc:mga0ckxp56 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ced91dbc16753e1926126fb572e317a2,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b29b40be303bce645ab6cccb287db43e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:89f4b3bd8673a6c53ae17508fa074a9b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ff45ce59a0a11d090374726d12306e7a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fe16753c3eaf274c8817e18759844f9f,, +ERROR:root:failing_data_objects: 5 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Assembly Activity for nmdc:mga0ckxp56 +INFO:root:record: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Assembly Activity for nmdc:mga0s1mr70 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Assembly Activity for nmdc:mga0s1mr70 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9847afc8c1bdfc6d6b74ad41eee18d6c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f2fea528e8e3070e5c4952c9b8067d3b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d5c108188782d9db54137f2df5cdef91,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:14784826f7da9e56db9a700536cec9a6,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e0ac35cd115a69573b13987b1fcd7e2b,, +ERROR:root:failing_data_objects: 5 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Assembly Activity for nmdc:mga0s1mr70 +INFO:root:record: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Assembly Activity for nmdc:mga07h8z62 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Assembly Activity for nmdc:mga07h8z62 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fa8014d4c57a62e270adc084a3584a5d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f9366e2f0add02cd25156f8619ddd706,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bc88b6c4d28e6b1de52c9ef5813588b7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d210bb2b49832e43ad20a98f98ed19f9,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3b3760c5385f042559b62ed702981547,, +ERROR:root:failing_data_objects: 5 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Assembly Activity for nmdc:mga07h8z62 +ERROR:root:FailedRecords: metagenome_assembly_set, 6 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452741 +INFO:root:found 3 records +INFO:root:record: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Annotation Activity for nmdc:mga0s1mr70 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Annotation Activity for nmdc:mga0s1mr70 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2a33fde698cdf95863551fd2dc39a979,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:158d2f6c288c42b823b32a03fdbe3c74,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1bf4dcf9c2e93645f17d079b84c64f78,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:41f6a07f063d50606051268338174dbb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0f6e05439f285144dc9f4f5f2b66aada,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4a1201e02e93e758c8220952189a5965,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6cc190c9593b353a9ff3ce0bf06bb725,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ab1d3854037c87f8b58ba277b5bedb13,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:20fb4674afd94388aef880c7ce2771d1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e438379bff1af67d55684ba10e6aa85f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cc09514977370be370f865914ae0ae32,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:1d13ca02061dc277ec5da1d9844327a4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f4cf86d349e8a5caf04e28d4d9aeb4d1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3e0354ab017453efdfc4a1013d5a199e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:604f88e67a5b09efa1d89cb793e651b4,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:f76d25e60a5c318f84464d2156e3243a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ec032acca697d8ae039b679db0a6c7cb,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:8fc2279a2e3fd2d5e3a824a3af7b6b21,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:11bcd24500b90ead5b676a0dbab5fc16,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2cb40e5e7373c77f5d16a66d9953b900,, +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:1849f5f6f6bd21c60071384b226ab8d2 +ERROR:root:failing_data_objects: 20 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, Annotation Activity for nmdc:mga0s1mr70 +INFO:root:record: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Annotation Activity for nmdc:mga07h8z62 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Annotation Activity for nmdc:mga07h8z62 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:6338d4af0c60aa751602ccc2bc49f9ff,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c3ba6f293d2ba5c32ace32cf623a68d7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:7db469baf68307ec4d66ff97dbd1de03,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:cd7856dedeb80d2038e809ec41c24989,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0a7c866558f34558a4811953f857d61d,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0a96befe82dc3583a16db1f10c14c412,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4c615c202e4dca37e322611b3c6b6639,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3c10467b81965a4e59136a7219595a33,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3912a6d5624806bd44f56ceb65962cab,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5961e1cf26b45ee468d915ed160ba35b,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0ce9fdae0747903e08be1d91371dc120,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:386a1e161689ec272d389de7046499f3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:82ae646835303b5e62a495d67f8ae5fc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:488973b15d1ebe412abe28eb3a960dbe,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:c37d48c67512ac5b5fc5fdccec4093ce,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:459e57ff001f7e97d93b9f7d3b227e42,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bd75fd68e7fa22c0e689e26f4afaab0a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:115c40383fb5f8e2e9b447e4745f633e,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:db4183a0518a6598dd0c250b3e82c7f3,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0584992573148456ca4652b554bc84e9,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d037376ef460a2a65a20978397e6194f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:75c0e2aa510a00109886b2b7832f8761,, +ERROR:root:failing_data_objects: 22 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, Annotation Activity for nmdc:mga07h8z62 +INFO:root:record: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Annotation Activity for nmdc:mga0ckxp56 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Annotation Activity for nmdc:mga0ckxp56 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4b9181b7dd851592e213edb3395aa811,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:61b6ed2b5e466ec90f04a0935ecf9e7c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:9f1fb6d92e354766ba4716bf07a201ee,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:151646f0a91169fac5c417307a9f7e6c,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5693192cb68c5b83de81644088649605,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:5f0132016ffabe2907b885bda0485042,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:b084582d9d4503a8f8d448114cb78280,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:0460521b62088f801e303be05b39666a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a1a368c2e1330eaf9076859db632a4e1,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d971b144d8b3a5576f4b2646f8edad8a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:fc3c1170db9f60033e7cf085c374d580,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3db32e220c9d4bbd3ce43bcce53b3ddc,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a6c329caa2a53f9ce6e3e25850d66726,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:bf803d8d24b09f9f9cce04bdbbcc82ea,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:4bc120c550cce2bbe81914661985182a,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:2e005783970c37e7bdbed83777c3332f,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:75359d7aab8d9826f56f68ee812e3ca8,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:a4550f26c724b2cb6b3d49637da1adf7,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:d2088b0b8224c0a2699b230c51135299,, +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:ece26b1e4a77c8f5ab35c2ea6580c167,, +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:29fdf5eeec3f230d578cc495d517a0f6 +ERROR:root:failing_data_objects: 20 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, Annotation Activity for nmdc:mga0ckxp56 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 6 +INFO:root:set_name: mags_activity_set for gold:Gp0452741 +INFO:root:found 3 records +INFO:root:record: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, MAGs Analysis Activity for nmdc:mga07h8z62 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, MAGs Analysis Activity for nmdc:mga07h8z62 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:3a1098d4e8c08456c2ca960c5c547f3c,, +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:c3d8c8dbbb328f6dc9e471a9b6363902 +ERROR:root:failing_data_objects: 1 +ERROR:root:OmicsMissingHasOutput: nmdc:c3d8c8dbbb328f6dc9e471a9b6363902, MAGs Analysis Activity for nmdc:mga07h8z62 +INFO:root:record: nmdc:29fdf5eeec3f230d578cc495d517a0f6, MAGs Analysis Activity for nmdc:mga0ckxp56 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, MAGs Analysis Activity for nmdc:mga0ckxp56 failing +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:967df797a098888771ad3ea575eac9bf,, +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:29fdf5eeec3f230d578cc495d517a0f6 +ERROR:root:failing_data_objects: 1 +ERROR:root:OmicsMissingHasOutput: nmdc:29fdf5eeec3f230d578cc495d517a0f6, MAGs Analysis Activity for nmdc:mga0ckxp56 +INFO:root:record: nmdc:1849f5f6f6bd21c60071384b226ab8d2, MAGs Analysis Activity for nmdc:mga0s1mr70 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, MAGs Analysis Activity for nmdc:mga0s1mr70 failing +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1849f5f6f6bd21c60071384b226ab8d2 +ERROR:root:FailedDataObject: OmicsMissingHasOutput: nmdc:e4b4bcf168449f645d9eb0329e6c408c,, +ERROR:root:failing_data_objects: 1 +ERROR:root:OmicsMissingHasOutput: nmdc:1849f5f6f6bd21c60071384b226ab8d2, MAGs Analysis Activity for nmdc:mga0s1mr70 +ERROR:root:FailedRecords: mags_activity_set, 6 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452741 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-q9secc05 +INFO:root:legacy_id: gold:Gp0452668 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-q9secc05 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:57b6aeaf924e2e5f1c8ef379fbae3b59 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:a4c6aa128600770fd27682f46fd81223 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:203ca4a223ce20f1cfa0f15d1a6c46ca +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:75ca4c78d3a7b93f5d748e5bb772aebc +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452668 +INFO:root:found 4 records +INFO:root:record: nmdc:079fd8a9106e3406748f8ab4fc88990a, Read QC Activity for nmdc:mga0nckv02 +INFO:root:PassingDataObject: nmdc:2c37d1611e40b9b6b34fd69e698b7357 +INFO:root:PassingDataObject: nmdc:2660f5dd327dee0bf1dc2194d2f9d85e +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:ea49167c60f6c4f13ada23982e63605e, Read QC Activity for nmdc:mga04rdz32 +INFO:root:PassingDataObject: nmdc:313aed366c000ab511b2babecad744e4 +INFO:root:PassingDataObject: nmdc:bcaf188bfda91e8b9b6941ce632e06e5 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:63dfb5ec2084abaccb3f6fe34579f367, Read QC Activity for nmdc:mga0ctf332 +INFO:root:PassingDataObject: nmdc:b10d5c93e9b7dec3daf1be557c283f1d +INFO:root:PassingDataObject: nmdc:cfa0f5840310c7f741bbb596c1d6465b +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:fddd00cb2105984228f195c5ff6017c2, Read QC Activity for nmdc:mga00whr66 +INFO:root:PassingDataObject: nmdc:b20547340767b79583a9d3905b7d6e48 +INFO:root:PassingDataObject: nmdc:80314daf96dc53948ccf0eff3faa4817 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452668 +INFO:root:found 4 records +INFO:root:record: nmdc:079fd8a9106e3406748f8ab4fc88990a, ReadBased Analysis Activity for nmdc:mga0nckv02 +INFO:root:PassingDataObject: nmdc:c25b9fc38656ca8a7212b746fc849075 +INFO:root:PassingDataObject: nmdc:1d3c1695dbef8419af698fc903ce396a +INFO:root:PassingDataObject: nmdc:ac761a484cb4bae703e3e6cd8adcaf50 +INFO:root:PassingDataObject: nmdc:87efd6bc76494077a6008d91c090a3ba +INFO:root:PassingDataObject: nmdc:8d114cec7b4286ded3b89f973cf1b600 +INFO:root:PassingDataObject: nmdc:072ce706df91a76d51d09797cc8dfd17 +INFO:root:PassingDataObject: nmdc:85eb7a05ed20da413b7a6b7d305d0e1a +INFO:root:PassingDataObject: nmdc:41d0c58602704e499e8bf26c63196e0c +INFO:root:PassingDataObject: nmdc:c90698b1a80de93b254f938e63829463 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:ea49167c60f6c4f13ada23982e63605e, ReadBased Analysis Activity for nmdc:mga04rdz32 +INFO:root:PassingDataObject: nmdc:5054fac65b4b00f842182695342df39a +INFO:root:PassingDataObject: nmdc:4ad55cd176926b3f02f496bb41b2a3ed +INFO:root:PassingDataObject: nmdc:097d04d108f350b2d3eda093abceef0f +INFO:root:PassingDataObject: nmdc:754f4393a2b99b55333df9019efcbe79 +INFO:root:PassingDataObject: nmdc:da846717e891c0204039a22763005225 +INFO:root:PassingDataObject: nmdc:1cd4392405ac9d2c8310654dd0901bb7 +INFO:root:PassingDataObject: nmdc:ae2094baa8e3e2d145c3d9408679b753 +INFO:root:PassingDataObject: nmdc:0c61da503e334fab4b84bc199585d816 +INFO:root:PassingDataObject: nmdc:750e0a02f9fc35e2440bb0eda7c4258c +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:fddd00cb2105984228f195c5ff6017c2, ReadBased Analysis Activity for nmdc:mga00whr66 +INFO:root:PassingDataObject: nmdc:5969d1e114476d62f94bd2c60ab4e2c5 +INFO:root:PassingDataObject: nmdc:74ad9e6d99407616806588819ad6f757 +INFO:root:PassingDataObject: nmdc:1a820048508d359ef80a0e233a06ba3d +INFO:root:PassingDataObject: nmdc:836236a3e11d5fa280d41901dc47b39c +INFO:root:PassingDataObject: nmdc:9a56cef4a1a65c617041fc853c869f62 +INFO:root:PassingDataObject: nmdc:0f4a88eaee66ee872cbc1f1592969a70 +INFO:root:PassingDataObject: nmdc:9af18755ee716f2a1fb4e07e25bcd8c9 +INFO:root:PassingDataObject: nmdc:696d3ce7854c133a158670cd690e4e34 +INFO:root:PassingDataObject: nmdc:e5233547519223c3d345033e2b0f7090 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:63dfb5ec2084abaccb3f6fe34579f367, ReadBased Analysis Activity for nmdc:mga0ctf332 +INFO:root:PassingDataObject: nmdc:40393eaaa8bf199fadbd356924d25e2a +INFO:root:PassingDataObject: nmdc:e9b855face397d461db4044af144d085 +INFO:root:PassingDataObject: nmdc:79d0cd02c455d346bbb8a8a0397d3046 +INFO:root:PassingDataObject: nmdc:4302c5a86faa1779cdb38c24614f7c06 +INFO:root:PassingDataObject: nmdc:ecf333958bf25dbd2010fbc30448817f +INFO:root:PassingDataObject: nmdc:6adb38086f4fede8f90e75598bbba7bc +INFO:root:PassingDataObject: nmdc:98a4e2f835025ec22922b1963fa075ef +INFO:root:PassingDataObject: nmdc:a8cd97fe44bff22ab98e0519b9bc00a7 +INFO:root:PassingDataObject: nmdc:bc83fa46690db232060c33d203be373b +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 4 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452668 +INFO:root:found 4 records +INFO:root:record: nmdc:079fd8a9106e3406748f8ab4fc88990a, Assembly Activity for nmdc:mga0nckv02 +INFO:root:PassingDataObject: nmdc:ccb94f03360654d71ac3fddd90f9e0d3 +INFO:root:PassingDataObject: nmdc:06df08b68e7d7e84ce62642f92521085 +INFO:root:PassingDataObject: nmdc:00a2481c90e32b42e7d5144e97dd22cc +INFO:root:PassingDataObject: nmdc:e69dcbe54eba96643737f5d2c29220ee +INFO:root:PassingDataObject: nmdc:ca708e3a61a6464599f467d285e41ff4 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:fddd00cb2105984228f195c5ff6017c2, Assembly Activity for nmdc:mga00whr66 +INFO:root:PassingDataObject: nmdc:7bb286d6b15535d0c7a16bbcb0e0073a +INFO:root:PassingDataObject: nmdc:3293576cb0a3d76b07d9c56b35d521d4 +INFO:root:PassingDataObject: nmdc:893eb061fd3a6c396f3049dca8128a86 +INFO:root:PassingDataObject: nmdc:817a703cf663c3e20e6d25886f4b4c7f +INFO:root:PassingDataObject: nmdc:57cf8730dea218eb09ac4ff165d02cbc +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:63dfb5ec2084abaccb3f6fe34579f367, Assembly Activity for nmdc:mga0ctf332 +INFO:root:PassingDataObject: nmdc:9f736aa48e2d4b3bec3128aeb58d5115 +INFO:root:PassingDataObject: nmdc:c5a166ba34e8ae75f4728919bc77d156 +INFO:root:PassingDataObject: nmdc:e6a3e8168344abd024e9529d65e142f2 +INFO:root:PassingDataObject: nmdc:a7f76a1b90cf36034cbfe60b5267b24c +INFO:root:PassingDataObject: nmdc:4ba04d3637007dcb5893819c1c51e9c4 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:ea49167c60f6c4f13ada23982e63605e, Assembly Activity for nmdc:mga04rdz32 +INFO:root:PassingDataObject: nmdc:b1afe5ea7d6008d1b42e13ca727f1986 +INFO:root:PassingDataObject: nmdc:4fde1a05aefa29ba4c3c1ce906742967 +INFO:root:PassingDataObject: nmdc:078362c15220f1c53de8da1c62d97051 +INFO:root:PassingDataObject: nmdc:f10b6c7750e3e39f9f311a0f0cda593d +INFO:root:PassingDataObject: nmdc:aa5beb248b30c5f437fdff1d5d96e612 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452668 +INFO:root:found 4 records +INFO:root:record: nmdc:079fd8a9106e3406748f8ab4fc88990a, Annotation Activity for nmdc:mga0nckv02 +INFO:root:PassingDataObject: nmdc:286ec665ab38944f1b81839b665a9cd7 +INFO:root:PassingDataObject: nmdc:ae2652b1c3d360475f0d581fd54e3c35 +INFO:root:PassingDataObject: nmdc:cd6e23707559f985126c890e44ca4e31 +INFO:root:PassingDataObject: nmdc:8f0d5ec3897970eae5b6564c255df9ee +INFO:root:PassingDataObject: nmdc:2243eedfb58b1755a6a9064046c7a0ed +INFO:root:PassingDataObject: nmdc:dcccaf07ef503e4f20d2850fdef0994f +INFO:root:PassingDataObject: nmdc:99568f7926745c1b469e85916c66e39b +INFO:root:PassingDataObject: nmdc:1046c8be1df33af461b9b0fe97c6647c +INFO:root:PassingDataObject: nmdc:4dbf35483a0b5e0197f1161601451d88 +INFO:root:PassingDataObject: nmdc:23faaa49f24b0cf9ba11f1e5ccaf5c4e +INFO:root:PassingDataObject: nmdc:07cf0c9dd8c9f9056f85dbec8fad7da1 +INFO:root:PassingDataObject: nmdc:d6d2cf0018e23347d3e298a9e3ff1a3a +INFO:root:PassingDataObject: nmdc:c76167046d76b25da469c1788cbdeba0 +INFO:root:PassingDataObject: nmdc:69524eb4447eb885d343162f6d032f75 +INFO:root:PassingDataObject: nmdc:7bbb8ddb12a0e0198d38a033a897df8a +INFO:root:PassingDataObject: nmdc:774115c0eb2fc587696a4060863072da +INFO:root:PassingDataObject: nmdc:f397aa870f80476c37dc1bd8c350aac3 +INFO:root:PassingDataObject: nmdc:ca0e021b11fd9c28f1c527a8ba966ea6 +INFO:root:PassingDataObject: nmdc:fb7d16de12a1102e74fa82043d0df089 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:079fd8a9106e3406748f8ab4fc88990a +ERROR:root:FailedDataObject: nmdc:13bfa3015b504da051201d529958b3a8, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:079fd8a9106e3406748f8ab4fc88990a, Annotation Activity for nmdc:mga0nckv02 +INFO:root:record: nmdc:ea49167c60f6c4f13ada23982e63605e, Annotation Activity for nmdc:mga04rdz32 +INFO:root:PassingDataObject: nmdc:9b4cc0ef112608fc06ebf42dc5a70fc1 +INFO:root:PassingDataObject: nmdc:6f8ad0dbdeb7268133421d847150bc4c +INFO:root:PassingDataObject: nmdc:862918cc9073333dc62b37c5afc94547 +INFO:root:PassingDataObject: nmdc:d6c7d669f0f1c195192414ba966b43ae +INFO:root:PassingDataObject: nmdc:ea34ade383bd80d0844a4971cc311182 +INFO:root:PassingDataObject: nmdc:b9ec8b896765c5dbcf139cfc6a1356d4 +INFO:root:PassingDataObject: nmdc:a06b8de2a10b392ed07d135236dc977f +INFO:root:PassingDataObject: nmdc:2deb0be5847b99f5701c4ccd1e20e937 +INFO:root:PassingDataObject: nmdc:3360b9eccd60656f169cf339456dcc66 +INFO:root:PassingDataObject: nmdc:4b1525bdf6dc7ae562b694e75eef0bac +INFO:root:PassingDataObject: nmdc:104fdce6de7b32438f90369555791e14 +INFO:root:PassingDataObject: nmdc:dcee45aaeedf883400b5c0ca5ff6cf68 +INFO:root:PassingDataObject: nmdc:b041f37d48b2e583ec39eb6d283fad06 +INFO:root:PassingDataObject: nmdc:31566067c3a6d398fe7fe7acd304780c +INFO:root:PassingDataObject: nmdc:5d72c760ddd086c6c92d59cabe11eba0 +INFO:root:PassingDataObject: nmdc:b332f81acaf682008b914a018ae6a0bf +INFO:root:PassingDataObject: nmdc:eec792a87f3ebdcd4ff1b7d1dab801aa +INFO:root:PassingDataObject: nmdc:231acd2cd4e5dac1843e1193631c01d2 +INFO:root:PassingDataObject: nmdc:1c712699a6b83d4f3d2956724229ea5b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:ea49167c60f6c4f13ada23982e63605e +ERROR:root:FailedDataObject: nmdc:cc581696439599edcceef0f3c08e0e2d, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ea49167c60f6c4f13ada23982e63605e, Annotation Activity for nmdc:mga04rdz32 +INFO:root:record: nmdc:63dfb5ec2084abaccb3f6fe34579f367, Annotation Activity for nmdc:mga0ctf332 +INFO:root:PassingDataObject: nmdc:49859a03b3cb353cf8310f8cdbe63e33 +INFO:root:PassingDataObject: nmdc:a8a6a039798445f4b9045d092d9c1007 +INFO:root:PassingDataObject: nmdc:d06d8fb620d86265ce534741e7d4381f +INFO:root:PassingDataObject: nmdc:5dd6a352472c909bbdf927511e446c13 +INFO:root:PassingDataObject: nmdc:ab5f19893e99f1d50ef4e923b4263fbc +INFO:root:PassingDataObject: nmdc:3999eaaa17f1d42856863f7f493f0d0b +INFO:root:PassingDataObject: nmdc:65f1409031b1b3450fc9a8c4aa3a9f2e +INFO:root:PassingDataObject: nmdc:b1e0a6bcf1cd2a4dd1bcd14f82449897 +INFO:root:PassingDataObject: nmdc:7923d847793d859fe971b38123635b57 +INFO:root:PassingDataObject: nmdc:542ef9cd552346787e16dcb1593d6149 +INFO:root:PassingDataObject: nmdc:03954fd0bcab003fd4672a988bf8a88e +INFO:root:PassingDataObject: nmdc:d7096638956800b9cf954b3b0932cf95 +INFO:root:PassingDataObject: nmdc:680727668713508ccad60eea2f22a297 +INFO:root:PassingDataObject: nmdc:2be71a621ec00ba2d32ed607cfb692ac +INFO:root:PassingDataObject: nmdc:62a1b3d8428920f0d1e42fd8b45529f1 +INFO:root:PassingDataObject: nmdc:0755ffd5906cb87c49bd308a45c4dc1f +INFO:root:PassingDataObject: nmdc:137fdc738850ee4423b7595a4c214aa8 +INFO:root:PassingDataObject: nmdc:abcbca65a7bc67ce4b9f6a950e081619 +INFO:root:PassingDataObject: nmdc:74df89f49746d6fd35069078a28791cc +INFO:root:PassingDataObject: nmdc:c9eeec5ed163890d424734faa15e479c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:63dfb5ec2084abaccb3f6fe34579f367 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:63dfb5ec2084abaccb3f6fe34579f367, Annotation Activity for nmdc:mga0ctf332 +INFO:root:record: nmdc:fddd00cb2105984228f195c5ff6017c2, Annotation Activity for nmdc:mga00whr66 +INFO:root:PassingDataObject: nmdc:77e9edf694563c6720b4d2c98a14b89a +INFO:root:PassingDataObject: nmdc:f8d593d3e1bf0c8b2165a74fd6ddde51 +INFO:root:PassingDataObject: nmdc:2596f614b975eec95eaa654de871162a +INFO:root:PassingDataObject: nmdc:c4e054ccbaf486df86955d0947dcb673 +INFO:root:PassingDataObject: nmdc:bf659c9a4c6298df2889c254ed1346fb +INFO:root:PassingDataObject: nmdc:b6a3c812c8e01002949d2d67d6086964 +INFO:root:PassingDataObject: nmdc:85abc164b2aace657485be9c1c704751 +INFO:root:PassingDataObject: nmdc:411cc2fc655a9c9696acec5cb5541f20 +INFO:root:PassingDataObject: nmdc:5ad3d6a5649fb00d5a71e0c96bb7ca98 +INFO:root:PassingDataObject: nmdc:16fee63a423e2beb8f8df8703eae18ae +INFO:root:PassingDataObject: nmdc:5e93d960fae1cff66d970e2d10931fd1 +INFO:root:PassingDataObject: nmdc:e938b6e4d7828905173c309cd7cd894c +INFO:root:PassingDataObject: nmdc:965da3dc8e4d28bd3be8741da85bcac9 +INFO:root:PassingDataObject: nmdc:897788931decfee3d6b346dc7cd89f4c +INFO:root:PassingDataObject: nmdc:b2f188a1fe60bf3bf57aa7b29d70dac1 +INFO:root:PassingDataObject: nmdc:56b0463caa0d4dde3922fa59526e1cae +INFO:root:PassingDataObject: nmdc:b62052b9e805f862ea2f625fda1fac15 +INFO:root:PassingDataObject: nmdc:1e97c5a0ca24954e7668e1b7059f490a +INFO:root:PassingDataObject: nmdc:d865883f2ded25180b2a061c0b507500 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:fddd00cb2105984228f195c5ff6017c2 +ERROR:root:FailedDataObject: nmdc:5a6011ea1705a093d8667e545a9ea0eb, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fddd00cb2105984228f195c5ff6017c2, Annotation Activity for nmdc:mga00whr66 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 4 +INFO:root:set_name: mags_activity_set for gold:Gp0452668 +INFO:root:found 4 records +INFO:root:record: nmdc:079fd8a9106e3406748f8ab4fc88990a, MAGs Analysis Activity for nmdc:mga0nckv02 +INFO:root:PassingDataObject: nmdc:3e25fbb9c41c32d352c87cc2f90841b1 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:079fd8a9106e3406748f8ab4fc88990a +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:079fd8a9106e3406748f8ab4fc88990a, MAGs Analysis Activity for nmdc:mga0nckv02 +INFO:root:record: nmdc:ea49167c60f6c4f13ada23982e63605e, MAGs Analysis Activity for nmdc:mga04rdz32 +INFO:root:PassingDataObject: nmdc:d77bb59d0f2df86856da39259c33d978 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:ea49167c60f6c4f13ada23982e63605e +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ea49167c60f6c4f13ada23982e63605e, MAGs Analysis Activity for nmdc:mga04rdz32 +INFO:root:record: nmdc:63dfb5ec2084abaccb3f6fe34579f367, MAGs Analysis Activity for nmdc:mga0ctf332 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:63dfb5ec2084abaccb3f6fe34579f367 +ERROR:root:FailedDataObject: nmdc:bbcd3b5cb666ff3a090c28f22b1741f1, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:63dfb5ec2084abaccb3f6fe34579f367, MAGs Analysis Activity for nmdc:mga0ctf332 +INFO:root:record: nmdc:fddd00cb2105984228f195c5ff6017c2, MAGs Analysis Activity for nmdc:mga00whr66 +INFO:root:PassingDataObject: nmdc:17caad4f3c90d933d52fb62a28f74683 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fddd00cb2105984228f195c5ff6017c2 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fddd00cb2105984228f195c5ff6017c2, MAGs Analysis Activity for nmdc:mga00whr66 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452668 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-491n9d74 +INFO:root:legacy_id: gold:Gp0452563 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-491n9d74 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4163b5fff34872b692edd3a93be2f50a +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6f130c78ed8d4c5a8e49c9aa644fcb4c +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:93d5c4bed3b2bba7793910a403d5fea9 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452563 +INFO:root:found 3 records +INFO:root:record: nmdc:0fe970cf46d72718ed82777ddf0556d7, Read QC Activity for nmdc:mga08bha93 +INFO:root:PassingDataObject: nmdc:fbbf1a61af1860556ebce966a90d3b9c +INFO:root:PassingDataObject: nmdc:4a0d249b91b707662310a5369b3a372e +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:2be77327a71d9ba04cba30015fd93fd0, Read QC Activity for nmdc:mga0m1wn11 +INFO:root:PassingDataObject: nmdc:31b2f117898e907ec940633c40a8aca1 +INFO:root:PassingDataObject: nmdc:459440d81c35f02f6acd742231c52668 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:4bc7f8e0057b5c575b9f49fe4b235b61, Read QC Activity for nmdc:mga0eya951 +INFO:root:PassingDataObject: nmdc:2214156f82711fe4d93b5d2ceb701698 +INFO:root:PassingDataObject: nmdc:9a9b36b00f956b8a5f524d4889368fa5 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452563 +INFO:root:found 3 records +INFO:root:record: nmdc:4bc7f8e0057b5c575b9f49fe4b235b61, ReadBased Analysis Activity for nmdc:mga0eya951 +INFO:root:PassingDataObject: nmdc:83acb423dc60939c2025ee32b7e3f931 +INFO:root:PassingDataObject: nmdc:795b4863e52173f48caf3b99e8a8a220 +INFO:root:PassingDataObject: nmdc:139aafffee195a81921383ba39194153 +INFO:root:PassingDataObject: nmdc:e35bbf185690df6edb9eb9113d2bd6f5 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:4bc7f8e0057b5c575b9f49fe4b235b61 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:4bc7f8e0057b5c575b9f49fe4b235b61 +ERROR:root:FailedDataObject: nmdc:b8353cb1f8c5bed6c08bdb9f22a3ec32, +ERROR:root:FailedDataObject: nmdc:dd807e6c612408ac2afb2f43ad1c80a5, +ERROR:root:FailedDataObject: nmdc:e3c312dc162c154045c9d25d08214181, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4bc7f8e0057b5c575b9f49fe4b235b61, ReadBased Analysis Activity for nmdc:mga0eya951 +INFO:root:record: nmdc:0fe970cf46d72718ed82777ddf0556d7, ReadBased Analysis Activity for nmdc:mga08bha93 +INFO:root:PassingDataObject: nmdc:a708a684647925629ba53eaac4289563 +INFO:root:PassingDataObject: nmdc:6f51dccec58fe2947892c667c08f402a +INFO:root:PassingDataObject: nmdc:cf99e1db2f207eb710c825b4f55eb747 +INFO:root:PassingDataObject: nmdc:b6eb40038c3a07f61746ef8abdf408b5 +INFO:root:PassingDataObject: nmdc:79b3fd747619409e7bb3aa4d96849a8e +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:0fe970cf46d72718ed82777ddf0556d7 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:0fe970cf46d72718ed82777ddf0556d7 +ERROR:root:FailedDataObject: nmdc:4578e8686f842ed1c69568a97b4bbe39, +ERROR:root:FailedDataObject: nmdc:dca27e5351b68c7930983caf5f7f6b9e, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0fe970cf46d72718ed82777ddf0556d7, ReadBased Analysis Activity for nmdc:mga08bha93 +INFO:root:record: nmdc:2be77327a71d9ba04cba30015fd93fd0, ReadBased Analysis Activity for nmdc:mga0m1wn11 +INFO:root:PassingDataObject: nmdc:e82dcef6e2c3f532c59c0694d5db64be +INFO:root:PassingDataObject: nmdc:ab597e29df0192663f0786922591ecf6 +INFO:root:PassingDataObject: nmdc:24b450a0859504570fcdc1b335c8bb78 +INFO:root:PassingDataObject: nmdc:d1bbd33fd888907e70a6c6e2b5ff635d +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:2be77327a71d9ba04cba30015fd93fd0 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:2be77327a71d9ba04cba30015fd93fd0 +ERROR:root:FailedDataObject: nmdc:7d64f82b140771861fd1cd04a2cf8a4d, +ERROR:root:FailedDataObject: nmdc:0c1795f766b42ddb9aaf28e846994fbd, +ERROR:root:FailedDataObject: nmdc:a49eb8847c3fbb9d41ba48d6f3c9516a, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2be77327a71d9ba04cba30015fd93fd0, ReadBased Analysis Activity for nmdc:mga0m1wn11 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452563 +INFO:root:found 3 records +INFO:root:record: nmdc:4bc7f8e0057b5c575b9f49fe4b235b61, Assembly Activity for nmdc:mga0eya951 +INFO:root:PassingDataObject: nmdc:cd23cd3db6039a1610187ead456c4a8d +INFO:root:PassingDataObject: nmdc:af42a42babe0fb22d7c31899871738f0 +INFO:root:PassingDataObject: nmdc:75b5f2cfb3644adf458651991d71099c +INFO:root:PassingDataObject: nmdc:ec4c53c31a0ea73aa3c11ce4ea8c92cd +INFO:root:PassingDataObject: nmdc:adefa154673888182fdf954e99ef906b +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:0fe970cf46d72718ed82777ddf0556d7, Assembly Activity for nmdc:mga08bha93 +INFO:root:PassingDataObject: nmdc:204a5d1974843752df8a77b90fd11571 +INFO:root:PassingDataObject: nmdc:0515568d021d2cdce0caad76fad5426d +INFO:root:PassingDataObject: nmdc:b814105506fc0d74fb1b1543c8f3e6f6 +INFO:root:PassingDataObject: nmdc:676384feceb3c26b909d6fd56e622ae8 +INFO:root:PassingDataObject: nmdc:8b0cd10beca4ca0caf49203426d06bd2 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:2be77327a71d9ba04cba30015fd93fd0, Assembly Activity for nmdc:mga0m1wn11 +INFO:root:PassingDataObject: nmdc:fdf0c9d82cbc70f76f958f83089bb78c +INFO:root:PassingDataObject: nmdc:3860ac2853a52c90bff74111f1f9d1f6 +INFO:root:PassingDataObject: nmdc:fd00bea279c2a51a550e26ee7fbf0119 +INFO:root:PassingDataObject: nmdc:1330b09031381c2570ce594957197a0f +INFO:root:PassingDataObject: nmdc:b9b4546f4fa907b91659de87b55b7c29 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452563 +INFO:root:found 3 records +INFO:root:record: nmdc:2be77327a71d9ba04cba30015fd93fd0, Annotation Activity for nmdc:mga0m1wn11 +INFO:root:PassingDataObject: nmdc:cf901e739b97604eecedca725c23ea51 +INFO:root:PassingDataObject: nmdc:32546bc9bc06065584844505e2dc04e6 +INFO:root:PassingDataObject: nmdc:37e6124f31f8d738c8899cd48cf8ca02 +INFO:root:PassingDataObject: nmdc:658e7409205ba26e67b87474174b3600 +INFO:root:PassingDataObject: nmdc:c62dea6ce859a230a5e54ec735ca49b4 +INFO:root:PassingDataObject: nmdc:18c2143ce7313646fcc5976d86e64652 +INFO:root:PassingDataObject: nmdc:2a68b806e2eb13d62aa967d72ad7eaf1 +INFO:root:PassingDataObject: nmdc:779f16e349a6c613f0f5d37a5d11130b +INFO:root:PassingDataObject: nmdc:76cc8e5688e4b0ea33a0de5f78001c5e +INFO:root:PassingDataObject: nmdc:7ad92ae4753af90858e53e0ecb86e7e8 +INFO:root:PassingDataObject: nmdc:5b7cf8b0de05ffaaf9b261817b2596a1 +INFO:root:PassingDataObject: nmdc:eef20c515a3ee1b04e004c77148408b9 +INFO:root:PassingDataObject: nmdc:889c9fddc0cf5bfb0df2eae97ee67181 +INFO:root:PassingDataObject: nmdc:114264bb14aefa62f9e7f0c0bd83c3e1 +INFO:root:PassingDataObject: nmdc:97edbba1d1b027d97d14cfcb73b01c0e +INFO:root:PassingDataObject: nmdc:9d844a461f7de77713ddbd445f86cc6b +INFO:root:PassingDataObject: nmdc:735f03a6b00ed8a3936cefad668d321b +INFO:root:PassingDataObject: nmdc:dfd99880418390bbc3e4030ac6c5d236 +INFO:root:PassingDataObject: nmdc:f677f90340aaca06334b6ad75b5acf7b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:2be77327a71d9ba04cba30015fd93fd0 +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2be77327a71d9ba04cba30015fd93fd0, Annotation Activity for nmdc:mga0m1wn11 +INFO:root:record: nmdc:4bc7f8e0057b5c575b9f49fe4b235b61, Annotation Activity for nmdc:mga0eya951 +INFO:root:PassingDataObject: nmdc:5b4c2fdf6e2cf69a68d380ab4ddbb603 +INFO:root:PassingDataObject: nmdc:1e0d88c93b2d829808fb8f28c505ba10 +INFO:root:PassingDataObject: nmdc:7fd30e1486d314cb614f180c488ba782 +INFO:root:PassingDataObject: nmdc:464feefc43eceecb16e2eaa537c8fd59 +INFO:root:PassingDataObject: nmdc:601c646a27a2d3194768de8285b14957 +INFO:root:PassingDataObject: nmdc:762ec60271ed57d45daf045f0e42ce1a +INFO:root:PassingDataObject: nmdc:91890efed04ce8df45a14b14cad8d66d +INFO:root:PassingDataObject: nmdc:d2727f844017144bd903cf79342615f4 +INFO:root:PassingDataObject: nmdc:59f3ec549cdada15667f01a16c5a38d0 +INFO:root:PassingDataObject: nmdc:25697a6c5bc46a034f406bd6b675060c +INFO:root:PassingDataObject: nmdc:db88d67a9c8e1b5c1c5a3f770b4a1040 +INFO:root:PassingDataObject: nmdc:f2a922cfcc64cd1746e0a0670813ab1e +INFO:root:PassingDataObject: nmdc:b291c1d51c0fc8460a95a2869751072e +INFO:root:PassingDataObject: nmdc:ce922eaaaebe29c9a48307cb379718fe +INFO:root:PassingDataObject: nmdc:bb65ad83b3fcc511065c649e9f4b680f +INFO:root:PassingDataObject: nmdc:84d142fe5534e89e3de4739af0b52634 +INFO:root:PassingDataObject: nmdc:6cd4656ee52a6ded1a97a627443c278a +INFO:root:PassingDataObject: nmdc:3354677ad23b608a313cb199b3e6b672 +INFO:root:PassingDataObject: nmdc:f85230b7167c744e50286e97404245d8 +INFO:root:PassingDataObject: nmdc:edd0dbab7e82a5dd579b160b47b9f09f +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:4bc7f8e0057b5c575b9f49fe4b235b61 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4bc7f8e0057b5c575b9f49fe4b235b61, Annotation Activity for nmdc:mga0eya951 +INFO:root:record: nmdc:0fe970cf46d72718ed82777ddf0556d7, Annotation Activity for nmdc:mga08bha93 +INFO:root:PassingDataObject: nmdc:749c453cf470f01675b950b6d210f4fd +INFO:root:PassingDataObject: nmdc:079bf067ac609877166d023378209a5e +INFO:root:PassingDataObject: nmdc:00dfd2cb949a9d2ef84e936aa3816f7e +INFO:root:PassingDataObject: nmdc:332a9b940966977323f39200c6455cac +INFO:root:PassingDataObject: nmdc:2790c11bec5ff551b8510a932286a30c +INFO:root:PassingDataObject: nmdc:1997f8fd6e9a3e2203060a87e2b74c3e +INFO:root:PassingDataObject: nmdc:68f5d606c9212085f21206d4f32acd2b +INFO:root:PassingDataObject: nmdc:c4793321b2c9f3d24398c78a2376cb90 +INFO:root:PassingDataObject: nmdc:0765400a2ec432c2eebab749a27fa7bc +INFO:root:PassingDataObject: nmdc:80d4e4309be416376d7e83f31951a6ae +INFO:root:PassingDataObject: nmdc:7b6543924330cebe2cd8064ea3f0f310 +INFO:root:PassingDataObject: nmdc:297aa3e52cb0c4e8822ad9a412fd5383 +INFO:root:PassingDataObject: nmdc:a3ed0164f3ee92f45c692490040bb660 +INFO:root:PassingDataObject: nmdc:faf037a42591148efa4848f6e9547cc7 +INFO:root:PassingDataObject: nmdc:eca99c0aaab8a48fd2c7028400062ad9 +INFO:root:PassingDataObject: nmdc:e9546853baea0beb011b0edbf8dfe847 +INFO:root:PassingDataObject: nmdc:33105e02e10ca3724112c65e4f8865dc +INFO:root:PassingDataObject: nmdc:23f8cd979e754fd07388f22d3137bdea +INFO:root:PassingDataObject: nmdc:61eea0b8fb48d05b8e08daf7bb83f12f +INFO:root:PassingDataObject: nmdc:44c2f21296157cefe6689792c70f0b9e +INFO:root:PassingDataObject: nmdc:53a9c9389725d76a6a678e1fa2ad1424 +INFO:root:PassingDataObject: nmdc:d6211f53f76d9e80a46479504e0bd53d +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452563 +INFO:root:found 3 records +INFO:root:record: nmdc:4bc7f8e0057b5c575b9f49fe4b235b61, MAGs Analysis Activity for nmdc:mga0eya951 +INFO:root:PassingDataObject: nmdc:c7fbdee6862e0115c043b26ac5a64338 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:4bc7f8e0057b5c575b9f49fe4b235b61 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4bc7f8e0057b5c575b9f49fe4b235b61, MAGs Analysis Activity for nmdc:mga0eya951 +INFO:root:record: nmdc:2be77327a71d9ba04cba30015fd93fd0, MAGs Analysis Activity for nmdc:mga0m1wn11 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2be77327a71d9ba04cba30015fd93fd0 +ERROR:root:FailedDataObject: nmdc:64610a6d4b0506f4f599a3e048c51e7d, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2be77327a71d9ba04cba30015fd93fd0, MAGs Analysis Activity for nmdc:mga0m1wn11 +INFO:root:record: nmdc:0fe970cf46d72718ed82777ddf0556d7, MAGs Analysis Activity for nmdc:mga08bha93 +INFO:root:PassingDataObject: nmdc:25afd88c348fd6e34befcb90cf36eec2 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0fe970cf46d72718ed82777ddf0556d7 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0fe970cf46d72718ed82777ddf0556d7, MAGs Analysis Activity for nmdc:mga08bha93 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452563 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-4rfzth12 +INFO:root:legacy_id: gold:Gp0452650 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-4rfzth12 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:69805d23cd10afb072304a923fdce6f4 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:18e2adf05a6c48085a1eb6b1130752e9 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:55e5a00518787320e5d694c03e084ef2 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452650 +INFO:root:found 3 records +INFO:root:record: nmdc:f70f3c0093cb712fed306173b30087a2, Read QC Activity for nmdc:mga00mdk15 +INFO:root:PassingDataObject: nmdc:f1afcd0e276ec986c7acd134ef7cd2bf +INFO:root:PassingDataObject: nmdc:836a8cc29a2facf089faff0672a1a93c +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:af462bea86d678e079f34be072b35cf9, Read QC Activity for nmdc:mga0kc8449 +INFO:root:PassingDataObject: nmdc:ff4e893e03a4c8547d6832493db739b0 +INFO:root:PassingDataObject: nmdc:d403edcada2f13fec939fa43c9c0a4a5 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:a5b0af9c16c1cbfac5aa85bc25956d35, Read QC Activity for nmdc:mga0tjqg16 +INFO:root:PassingDataObject: nmdc:35a7abc9d80c56bf7b334b63ee09b783 +INFO:root:PassingDataObject: nmdc:962b7d5229542806a26b103b02e8f86c +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452650 +INFO:root:found 3 records +INFO:root:record: nmdc:f70f3c0093cb712fed306173b30087a2, ReadBased Analysis Activity for nmdc:mga00mdk15 +INFO:root:PassingDataObject: nmdc:f7373f69028eb7a622421a7e30e7b124 +INFO:root:PassingDataObject: nmdc:e7e5c0872b48dc3c44f598cecbdc89f1 +INFO:root:PassingDataObject: nmdc:856b170618aff556c029c20a9aacdcbc +INFO:root:PassingDataObject: nmdc:39c29744b071c6ebf8f361c6e6f44215 +INFO:root:PassingDataObject: nmdc:dc5618f8c9cd842c60cd5716e2676250 +INFO:root:PassingDataObject: nmdc:aecfcb40826feb090d94db4578146907 +INFO:root:PassingDataObject: nmdc:eb34b8702be752a4a49e797c7d5c849c +INFO:root:PassingDataObject: nmdc:c941aae13f33feb231a8cabe1b721571 +INFO:root:PassingDataObject: nmdc:85143c9cb43505ce759a0c5a0698dcb8 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:af462bea86d678e079f34be072b35cf9, ReadBased Analysis Activity for nmdc:mga0kc8449 +INFO:root:PassingDataObject: nmdc:d9d9bf6f0edb30b30bfd1864ec7340df +INFO:root:PassingDataObject: nmdc:4faf9d146e3167b7745eac8c17cfc4b5 +INFO:root:PassingDataObject: nmdc:5d648928a1ac7547f52196d05d296787 +INFO:root:PassingDataObject: nmdc:db2e0aec9e9d0ef0e79fd6d6e126439e +INFO:root:PassingDataObject: nmdc:7a53c5bef6485c373e53c87fa0df91a7 +INFO:root:PassingDataObject: nmdc:d3bb1e5ce803370de4487be61cde343d +INFO:root:PassingDataObject: nmdc:b53a1a0705df980505afb092ad6990f2 +INFO:root:PassingDataObject: nmdc:a38e757915d8ca0aa692bb7a5efa9ea6 +INFO:root:PassingDataObject: nmdc:ec32f29fce5fe393b150cbd598e4d6a3 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:a5b0af9c16c1cbfac5aa85bc25956d35, ReadBased Analysis Activity for nmdc:mga0tjqg16 +INFO:root:PassingDataObject: nmdc:a7833ff3c63ac737976e7219efb6cadb +INFO:root:PassingDataObject: nmdc:4327c7c8dc43b652f3c4bced77acd79f +INFO:root:PassingDataObject: nmdc:76103b2dea469becb18aff928edcba21 +INFO:root:PassingDataObject: nmdc:a4703a709853810c4107d8309002c005 +INFO:root:PassingDataObject: nmdc:930b7ea101497cc0afe305b8a27e2c65 +INFO:root:PassingDataObject: nmdc:bef56c02b339b8d4338b30d305281d39 +INFO:root:PassingDataObject: nmdc:12448300da7af60ca0444c1759c35fa2 +INFO:root:PassingDataObject: nmdc:1a0c7f5b5187dcfb05af51a9f99a71c6 +INFO:root:PassingDataObject: nmdc:dd5f17b8eaa54b5d89fff733a4c3f7de +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452650 +INFO:root:found 3 records +INFO:root:record: nmdc:f70f3c0093cb712fed306173b30087a2, Assembly Activity for nmdc:mga00mdk15 +INFO:root:PassingDataObject: nmdc:07d325817b48afc734273da5560818cc +INFO:root:PassingDataObject: nmdc:bb114a1ff3e03d6cae84f6029f5563a8 +INFO:root:PassingDataObject: nmdc:2128db7da2596a6f67810f8d14689a77 +INFO:root:PassingDataObject: nmdc:de37cd460ab11a4401bc981bc44fe9f3 +INFO:root:PassingDataObject: nmdc:a0c8ba7bd37ce71dbaf445c61eab54fa +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:a5b0af9c16c1cbfac5aa85bc25956d35, Assembly Activity for nmdc:mga0tjqg16 +INFO:root:PassingDataObject: nmdc:9989c8c04c1b902b62011e614060bee7 +INFO:root:PassingDataObject: nmdc:3c2820a51805943d5bb6bc82b1cd2c24 +INFO:root:PassingDataObject: nmdc:1f4740d3355ae72d0148be131a125b4b +INFO:root:PassingDataObject: nmdc:be3cdf4e1bd97e934c75520fb03ae12c +INFO:root:PassingDataObject: nmdc:909012f1366819286050970a34c86f44 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:af462bea86d678e079f34be072b35cf9, Assembly Activity for nmdc:mga0kc8449 +INFO:root:PassingDataObject: nmdc:76fc41af65cdef1a66deb95baa1f5402 +INFO:root:PassingDataObject: nmdc:a5f0829e84a1bd93aa04b5d93fe7e0ba +INFO:root:PassingDataObject: nmdc:7baf00f34d09b82bcf043380282b38a6 +INFO:root:PassingDataObject: nmdc:bf95d258e8a4d6c686cafcff59a57def +INFO:root:PassingDataObject: nmdc:9a4632ab055439506217795b0b71b267 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452650 +INFO:root:found 3 records +INFO:root:record: nmdc:af462bea86d678e079f34be072b35cf9, Annotation Activity for nmdc:mga0kc8449 +INFO:root:PassingDataObject: nmdc:ec5ced9e25d131ac67411cd5c257f661 +INFO:root:PassingDataObject: nmdc:a742f8761a5917ded932afbbd11c7bb2 +INFO:root:PassingDataObject: nmdc:3799a742506d7e6d365876440c61151c +INFO:root:PassingDataObject: nmdc:331e7d630f4971d3067a4943e271090a +INFO:root:PassingDataObject: nmdc:8db7859baf9bc0b8966e5dcf197e79b3 +INFO:root:PassingDataObject: nmdc:82271035ac0097db7a7b329ea5d1b34f +INFO:root:PassingDataObject: nmdc:8ff414c1950e951dd0987fb94557ab1a +INFO:root:PassingDataObject: nmdc:971971415545588de0388e2af475ac09 +INFO:root:PassingDataObject: nmdc:68e6a7ac0513e3a4bc5835cc6b1991c5 +INFO:root:PassingDataObject: nmdc:0f142acff07f265b3c6e3e3686d810ca +INFO:root:PassingDataObject: nmdc:219efbc04c31b471c8a0cbfd17b05d9f +INFO:root:PassingDataObject: nmdc:220972fa017e36520132697354fd3296 +INFO:root:PassingDataObject: nmdc:237596ea4a9e3d9f2fe6b6ea91b3194a +INFO:root:PassingDataObject: nmdc:76ce5c3c2282b3a5dd9ce50bb3aee399 +INFO:root:PassingDataObject: nmdc:72f9f6de4b522922dfefb3087e320222 +INFO:root:PassingDataObject: nmdc:0fde06be53342cd59849e5fe848190c9 +INFO:root:PassingDataObject: nmdc:679c1d04b6846069c4b23ed22d36f8ed +INFO:root:PassingDataObject: nmdc:921f9cbe6d8391b6e4707a3e882ebaca +INFO:root:PassingDataObject: nmdc:ce2b90bc1cc01726a7f48113676dbc24 +INFO:root:PassingDataObject: nmdc:c54bb7c0ac03be75f66872f3951d3f73 +INFO:root:PassingDataObject: nmdc:20a4d9857c2c43be0e235f70e5233160 +INFO:root:PassingDataObject: nmdc:eb25d99d731e0c08eba0627faf84b6ff +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:f70f3c0093cb712fed306173b30087a2, Annotation Activity for nmdc:mga00mdk15 +INFO:root:PassingDataObject: nmdc:a6489245f3310fefa142d56d0fd3469a +INFO:root:PassingDataObject: nmdc:f330e9ba4bc224175f68d157858739fd +INFO:root:PassingDataObject: nmdc:9f123f58a48e8729c1869ee7b794d2e6 +INFO:root:PassingDataObject: nmdc:ab50cc202f9aabeb15fa48519b3278d6 +INFO:root:PassingDataObject: nmdc:f590b1b5461b570575b93e0d2fbdb368 +INFO:root:PassingDataObject: nmdc:50cbf5979fdc217b2071905c0d149b82 +INFO:root:PassingDataObject: nmdc:480c65497a3411a3e36350a9afb4669f +INFO:root:PassingDataObject: nmdc:2d0570b7e208aa395595f32e3cd1fbf1 +INFO:root:PassingDataObject: nmdc:bd46d16a17e8ff740f8b3e1fa8118418 +INFO:root:PassingDataObject: nmdc:c7b399b261e9cbf40f135a8155693e81 +INFO:root:PassingDataObject: nmdc:8a95513b14d61223ede566ae0e6953aa +INFO:root:PassingDataObject: nmdc:2044f1901895ef306487d34f194cebd2 +INFO:root:PassingDataObject: nmdc:8edadffa8c22ccabb4f0a3500022f7c9 +INFO:root:PassingDataObject: nmdc:64f72b721d458be9f1db8085e38b1353 +INFO:root:PassingDataObject: nmdc:b1e05700ebe81291e6ce513c20372f22 +INFO:root:PassingDataObject: nmdc:ace397c7bcaeca6734b90a41f60a4721 +INFO:root:PassingDataObject: nmdc:249568eefbc08e49773d71ae951cf31a +INFO:root:PassingDataObject: nmdc:2b1b6d6b3870b60129e30a438d833441 +INFO:root:PassingDataObject: nmdc:b91b1fb3f47b53c1faed2e9ac94c94da +INFO:root:PassingDataObject: nmdc:c30ece8869b08d349794c657a24f4ccd +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:f70f3c0093cb712fed306173b30087a2 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f70f3c0093cb712fed306173b30087a2, Annotation Activity for nmdc:mga00mdk15 +INFO:root:record: nmdc:a5b0af9c16c1cbfac5aa85bc25956d35, Annotation Activity for nmdc:mga0tjqg16 +INFO:root:PassingDataObject: nmdc:6c484299128d94a0dc57af807a770440 +INFO:root:PassingDataObject: nmdc:70e6e75b379eb2a275866d10b5579fca +INFO:root:PassingDataObject: nmdc:fb424ca1d5b5d9fc42e27a15137ad822 +INFO:root:PassingDataObject: nmdc:b5492e033497b16f37bee993c5bda535 +INFO:root:PassingDataObject: nmdc:14ca6fbf0c6abfe48c48094ac58cb929 +INFO:root:PassingDataObject: nmdc:cbece17493bdb03083dd980ff191ed99 +INFO:root:PassingDataObject: nmdc:44959e7b46e9e63461f3c4a52bce680a +INFO:root:PassingDataObject: nmdc:b087a0a4ac5964a5f3e2efffdf0dc620 +INFO:root:PassingDataObject: nmdc:af14404e00084f17de8391ab6ff2eff9 +INFO:root:PassingDataObject: nmdc:cbc829753cb46cafc55f55e2c279da5e +INFO:root:PassingDataObject: nmdc:102c2f3fe747c8fb84f60b75e9ac8ccc +INFO:root:PassingDataObject: nmdc:8f208b09b6a4a96cc6f406c6ad13ebfe +INFO:root:PassingDataObject: nmdc:f58a158ecab4c9970b12cbbff8d6adc4 +INFO:root:PassingDataObject: nmdc:3d7a13e7c4e3c3c03e732041b37d9e36 +INFO:root:PassingDataObject: nmdc:eb26f65b838a199984af78874d6be509 +INFO:root:PassingDataObject: nmdc:ded2016d63384886fd76547eb9227aba +INFO:root:PassingDataObject: nmdc:7dcb42f2099f2d705f35196e1deb4788 +INFO:root:PassingDataObject: nmdc:a53bf32ca9c99f079bdb5c2f7e6ee3a7 +INFO:root:PassingDataObject: nmdc:877d4687ac2ab86fb2c8a1ac4cee3783 +INFO:root:PassingDataObject: nmdc:bf97da4d0ada74804fc511973e34ab80 +INFO:root:PassingDataObject: nmdc:d747ffa9ec843bf902bdc53962644c4c +INFO:root:PassingDataObject: nmdc:37605f155db4a6aca1ad81449d0787ad +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452650 +INFO:root:found 3 records +INFO:root:record: nmdc:af462bea86d678e079f34be072b35cf9, MAGs Analysis Activity for nmdc:mga0kc8449 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:af462bea86d678e079f34be072b35cf9 +ERROR:root:FailedDataObject: nmdc:1553fd6a24a1d3bf20c2097fa18362e8, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:af462bea86d678e079f34be072b35cf9, MAGs Analysis Activity for nmdc:mga0kc8449 +INFO:root:record: nmdc:f70f3c0093cb712fed306173b30087a2, MAGs Analysis Activity for nmdc:mga00mdk15 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:f70f3c0093cb712fed306173b30087a2 +ERROR:root:FailedDataObject: nmdc:5074995993f220d5a58472ed22532ade, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f70f3c0093cb712fed306173b30087a2, MAGs Analysis Activity for nmdc:mga00mdk15 +INFO:root:record: nmdc:a5b0af9c16c1cbfac5aa85bc25956d35, MAGs Analysis Activity for nmdc:mga0tjqg16 +INFO:root:PassingDataObject: nmdc:c6746ecc8c46018150c8bca447cd1660 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a5b0af9c16c1cbfac5aa85bc25956d35 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a5b0af9c16c1cbfac5aa85bc25956d35, MAGs Analysis Activity for nmdc:mga0tjqg16 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452650 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-gkk9ex26 +INFO:root:legacy_id: gold:Gp0452640 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gkk9ex26 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6fa7a076755a394730e0f5074738a483 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b4d4845cee6093fbaf20d1b90f68ec25 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6b3568d639719c3577625356dbc7adb1 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452640 +INFO:root:found 3 records +INFO:root:record: nmdc:69a6dcfb9ab59097e7dbd9efdd54bd8c, Read QC Activity for nmdc:mga0p8vw30 +INFO:root:PassingDataObject: nmdc:5b1a1a06e3a9f6544201af8e198262c4 +INFO:root:PassingDataObject: nmdc:18a83573d9042b94542cf3dfb33464f3 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5, Read QC Activity for nmdc:mga0gv2179 +INFO:root:PassingDataObject: nmdc:830f3c2d2ae846a7cb60a2f500f7a691 +INFO:root:PassingDataObject: nmdc:7143d83fc5034927cc6c4c802340761e +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:5e6cbe6e72f7fc084e08928994e51f80, Read QC Activity for nmdc:mga0gk8h72 +INFO:root:PassingDataObject: nmdc:e6dca41515f0563d0892fc30fb5ef09b +INFO:root:PassingDataObject: nmdc:5ec78d24631dacb04f11d4ab5655bedf +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452640 +INFO:root:found 3 records +INFO:root:record: nmdc:69a6dcfb9ab59097e7dbd9efdd54bd8c, ReadBased Analysis Activity for nmdc:mga0p8vw30 +INFO:root:PassingDataObject: nmdc:da62bfb5aecb7fb30942ede5b86f6488 +INFO:root:PassingDataObject: nmdc:2c2c09365510430ce4cea9eb331fe13c +INFO:root:PassingDataObject: nmdc:75f9b185e25feb65eb9e2616923d82e9 +INFO:root:PassingDataObject: nmdc:59872e923c9e0aaead42ca97f5bd1d35 +INFO:root:PassingDataObject: nmdc:1f20f02b60671119b509c2d19019c7bc +INFO:root:PassingDataObject: nmdc:ba2c7c86394b57988be00eb59785f2a3 +INFO:root:PassingDataObject: nmdc:ce3f65e5f8b6f0246d3271ca20afc9f2 +INFO:root:PassingDataObject: nmdc:5903a3aba8c235867b808baa6829c762 +INFO:root:PassingDataObject: nmdc:a9f35e12860e0780ca7dd87ae5133afc +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5, ReadBased Analysis Activity for nmdc:mga0gv2179 +INFO:root:PassingDataObject: nmdc:109e15c9b7add1c4700ef4d0aa5bfeb1 +INFO:root:PassingDataObject: nmdc:d49613542a551d8159d6aabfda0f7505 +INFO:root:PassingDataObject: nmdc:d9178f8777e4b836454e001864531e4a +INFO:root:PassingDataObject: nmdc:fc99d050911c796d69c1475d44d53c42 +INFO:root:PassingDataObject: nmdc:704ea7f9c2f4803cf732fa87398054d9 +INFO:root:PassingDataObject: nmdc:9001f80ce3265252556e2777f2d45a0b +INFO:root:PassingDataObject: nmdc:3ee1c023766be02bbb3f0dd2e7ef65c6 +INFO:root:PassingDataObject: nmdc:192556d84646d8742bf15d2ea874d133 +INFO:root:PassingDataObject: nmdc:3dfc6845aa126533f2079dc8c1597f12 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:5e6cbe6e72f7fc084e08928994e51f80, ReadBased Analysis Activity for nmdc:mga0gk8h72 +INFO:root:PassingDataObject: nmdc:bed80531bf0df17b61a45179662eba6f +INFO:root:PassingDataObject: nmdc:10eac9e524b8581242cf44149e211581 +INFO:root:PassingDataObject: nmdc:7b617542e9c966928a77072d53e5f9e5 +INFO:root:PassingDataObject: nmdc:e459bca71b3b2b21f6e76f91afa01645 +INFO:root:PassingDataObject: nmdc:aff88d2245daa081b6b40b35b3a7a2d8 +INFO:root:PassingDataObject: nmdc:91f6c53c986f8b58b659ee577e3a57e3 +INFO:root:PassingDataObject: nmdc:6ea8a8ed90966f6875d68365acc9fd4f +INFO:root:PassingDataObject: nmdc:4898369a38d864ee3b9a3314d5d996c9 +INFO:root:PassingDataObject: nmdc:fb41563d65c56c2843752953a657ad31 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452640 +INFO:root:found 3 records +INFO:root:record: nmdc:69a6dcfb9ab59097e7dbd9efdd54bd8c, Assembly Activity for nmdc:mga0p8vw30 +INFO:root:PassingDataObject: nmdc:a1dd1dc30160dc4972eb5a0fef6ae3fb +INFO:root:PassingDataObject: nmdc:4f8cc6032eb48527c8dee35b400cc49d +INFO:root:PassingDataObject: nmdc:956ecc149597d5980ba69c9c5ee1285c +INFO:root:PassingDataObject: nmdc:149f2b5451358d62d7238b66c7270cc4 +INFO:root:PassingDataObject: nmdc:feeb988ca12fcdb0c6852dd6b650cac5 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5, Assembly Activity for nmdc:mga0gv2179 +INFO:root:PassingDataObject: nmdc:0af2a97268759c04afe2cc8555934603 +INFO:root:PassingDataObject: nmdc:66f24312d890a6fffa14016f249a57fd +INFO:root:PassingDataObject: nmdc:b2c8a77838e7bdc1bb60f9137073201a +INFO:root:PassingDataObject: nmdc:8f85aff6c4dd9d8d05301bcf6c8150d7 +INFO:root:PassingDataObject: nmdc:e570d37801fba4d522a61dd084290d01 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:5e6cbe6e72f7fc084e08928994e51f80, Assembly Activity for nmdc:mga0gk8h72 +INFO:root:PassingDataObject: nmdc:3ddc4bf6a8ca4c65d91751c6a63fad3e +INFO:root:PassingDataObject: nmdc:43055c706b1c7a8a5f7766cc58dc94fc +INFO:root:PassingDataObject: nmdc:9197429276ef0aa41069f0ff356e18b4 +INFO:root:PassingDataObject: nmdc:c95b2634c8b43784232fa37881975d15 +INFO:root:PassingDataObject: nmdc:bc9d666066a73200fe0e4fdd06bf34c1 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452640 +INFO:root:found 3 records +INFO:root:record: nmdc:69a6dcfb9ab59097e7dbd9efdd54bd8c, Annotation Activity for nmdc:mga0p8vw30 +INFO:root:PassingDataObject: nmdc:b0000f8625fcd264f8529cc781de85c0 +INFO:root:PassingDataObject: nmdc:fe7f38921f8cbcdf404dea7e27ce7af6 +INFO:root:PassingDataObject: nmdc:b1eb887420a5528dd9fbf2aba8207442 +INFO:root:PassingDataObject: nmdc:6b0ef2049abce5e21ba6d526ff9db389 +INFO:root:PassingDataObject: nmdc:2f5c6d1cd5530d68f40e9dfbf27a09f1 +INFO:root:PassingDataObject: nmdc:3225c5fe25fdc9949b78b3263dfd7479 +INFO:root:PassingDataObject: nmdc:daa0576119499e50490223b882252e93 +INFO:root:PassingDataObject: nmdc:0486788629df622e09276a008b813ced +INFO:root:PassingDataObject: nmdc:d14b0fe3623616bf330311939304bad6 +INFO:root:PassingDataObject: nmdc:e44ada4096d84776b2be2e85e17cdd39 +INFO:root:PassingDataObject: nmdc:48604db381caacdc0bf3bc897e8dd654 +INFO:root:PassingDataObject: nmdc:7d1a9080b7ca89a9399fe79ee74ad076 +INFO:root:PassingDataObject: nmdc:aacb79632fe07d9e37ce2b9403d5d588 +INFO:root:PassingDataObject: nmdc:44666a8b79c3f0e49ded6aa7d36e7902 +INFO:root:PassingDataObject: nmdc:4039194eac5fae8ee08b2ea0147e931d +INFO:root:PassingDataObject: nmdc:d6abc329ea1312a547fe7bcbc8364ac4 +INFO:root:PassingDataObject: nmdc:3852947d6f32736b4f08924b98a58789 +INFO:root:PassingDataObject: nmdc:2b93ec196c6def3b60d43a5d6fa7796a +INFO:root:PassingDataObject: nmdc:110ac2034a1e46f8b527cab3904389b6 +INFO:root:PassingDataObject: nmdc:3282adb792c8523828661be31f64d191 +INFO:root:PassingDataObject: nmdc:fb91a7e3c508ad56743f19e1b1b2edd0 +INFO:root:PassingDataObject: nmdc:1b49fbd7ba7a9eb7794cb7cc5ce1d45a +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:5e6cbe6e72f7fc084e08928994e51f80, Annotation Activity for nmdc:mga0gk8h72 +INFO:root:PassingDataObject: nmdc:5af6d1c746201f8ac979786f79abc622 +INFO:root:PassingDataObject: nmdc:53f6fbe4629b02426f0462d10aac57e5 +INFO:root:PassingDataObject: nmdc:90d36293e8c895f97192564cf6331a5f +INFO:root:PassingDataObject: nmdc:7fa53c7a0c8a03a3fe177424a90fb6a8 +INFO:root:PassingDataObject: nmdc:d4f70c61a7d6ba0806659a36ed8549b3 +INFO:root:PassingDataObject: nmdc:b5f78b3e8e2b816098afc30f3693c91e +INFO:root:PassingDataObject: nmdc:cd76c466f043d644163158f089d86913 +INFO:root:PassingDataObject: nmdc:978542e3bc724ff403a44c59a1c3db40 +INFO:root:PassingDataObject: nmdc:7165ab562a8be21a2212938e0e25e13d +INFO:root:PassingDataObject: nmdc:d50ac5502b1dcd454a6a0aa56ba5db55 +INFO:root:PassingDataObject: nmdc:90efc1892739cfc8bccad753e76791ba +INFO:root:PassingDataObject: nmdc:3d24bfd4e23e3e7371ecd5a2af6c15cf +INFO:root:PassingDataObject: nmdc:0a6008cbd8e0c268ccd57a96592a9f38 +INFO:root:PassingDataObject: nmdc:0270abfcd9d2f9c7e19f1e4bc159e4cf +INFO:root:PassingDataObject: nmdc:93430ab9758ddfbae129c42e34dd95dd +INFO:root:PassingDataObject: nmdc:35f98f3336536f9f57bd85f59df9cd3b +INFO:root:PassingDataObject: nmdc:f101d5d3149a859b9c8e06bc53b9b9e1 +INFO:root:PassingDataObject: nmdc:179a8fcb19f9f0e4625a30bad75d39a6 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:5e6cbe6e72f7fc084e08928994e51f80 +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5e6cbe6e72f7fc084e08928994e51f80, Annotation Activity for nmdc:mga0gk8h72 +INFO:root:record: nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5, Annotation Activity for nmdc:mga0gv2179 +INFO:root:PassingDataObject: nmdc:14711509754a14494becfae6dc0b1f55 +INFO:root:PassingDataObject: nmdc:77069261a14ea512075a604ee227ce56 +INFO:root:PassingDataObject: nmdc:0d77c9cdf8c88e36279d0cfaf4b46cc4 +INFO:root:PassingDataObject: nmdc:98fe39da1825ecec1ffb008ba7bfc4c9 +INFO:root:PassingDataObject: nmdc:137a00108209cf6758eb63cb7a7387de +INFO:root:PassingDataObject: nmdc:d3c14dc0cbb8b4796ecf3fd6260f566c +INFO:root:PassingDataObject: nmdc:092c1a21bee553c88192e490cbfc4a26 +INFO:root:PassingDataObject: nmdc:b5279c0785d3799ade97a6c8697cfda7 +INFO:root:PassingDataObject: nmdc:212b8d3ac970d9787eb4612109f4934d +INFO:root:PassingDataObject: nmdc:513fb13e7b31afa870c06bbebeee8c43 +INFO:root:PassingDataObject: nmdc:a6fdfe437f2a3a729ba46b1ff5b64d58 +INFO:root:PassingDataObject: nmdc:24fdeccf066778d0aea0658e8a34535a +INFO:root:PassingDataObject: nmdc:503de5e9f4cdf19754d155b44b12fc91 +INFO:root:PassingDataObject: nmdc:38591f47ed0b3bceb91ce88584a7b989 +INFO:root:PassingDataObject: nmdc:8fca7259158c10576b4aac82aa83af13 +INFO:root:PassingDataObject: nmdc:0da8884c54bb74a7bb705670d5031f33 +INFO:root:PassingDataObject: nmdc:d874dc2c2014585defa718e609f3b3ff +INFO:root:PassingDataObject: nmdc:b5fa685f9ddea53678f8dadab9746b54 +INFO:root:PassingDataObject: nmdc:db6a859c5e5db040a865824feaa5d11a +INFO:root:PassingDataObject: nmdc:3d9f0481dd2f6e20c39b4d05565e02ad +INFO:root:PassingDataObject: nmdc:bbfa0f6d7cee334122011b7a78b2b38e +INFO:root:PassingDataObject: nmdc:ac645b60f5d94b481bc0189fa67401d8 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452640 +INFO:root:found 3 records +INFO:root:record: nmdc:69a6dcfb9ab59097e7dbd9efdd54bd8c, MAGs Analysis Activity for nmdc:mga0p8vw30 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:69a6dcfb9ab59097e7dbd9efdd54bd8c +ERROR:root:FailedDataObject: nmdc:03c97708823bb249df65d4e6513c3a4b, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:69a6dcfb9ab59097e7dbd9efdd54bd8c, MAGs Analysis Activity for nmdc:mga0p8vw30 +INFO:root:record: nmdc:5e6cbe6e72f7fc084e08928994e51f80, MAGs Analysis Activity for nmdc:mga0gk8h72 +INFO:root:PassingDataObject: nmdc:18b285197eb9e6153dbc98cb57bff86a +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5e6cbe6e72f7fc084e08928994e51f80 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5e6cbe6e72f7fc084e08928994e51f80, MAGs Analysis Activity for nmdc:mga0gk8h72 +INFO:root:record: nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5, MAGs Analysis Activity for nmdc:mga0gv2179 +INFO:root:PassingDataObject: nmdc:6a76e2adf5fbf138f7d6ab1d887932c5 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5, MAGs Analysis Activity for nmdc:mga0gv2179 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452640 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-8r9aq834 +INFO:root:legacy_id: gold:Gp0452564 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-8r9aq834 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:aab32bc3c31de86e2a469cec09c8dbd4 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ab611c823ae881204ff7a3d392e1c8c1 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:159cdfe48288f97db31d9faafe0dd9c1 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:e56253d3b762168c68c7f9a6f541a67d +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452564 +INFO:root:found 4 records +INFO:root:record: nmdc:e4ae0b239de3c71d5f5b541a2e2add9c, Read QC Activity for nmdc:mga05pqa95 +INFO:root:PassingDataObject: nmdc:72eabf7d3eb1eced050247a800d6f01c +INFO:root:PassingDataObject: nmdc:33a92661e655803763bc83ade763e631 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:d4fae2dd707f8a402da92db55b46fd8a, Read QC Activity for nmdc:mga0zp7252 +INFO:root:PassingDataObject: nmdc:0eedc9538c9dc29f52f2f3d096c95361 +INFO:root:PassingDataObject: nmdc:4c4f04a9268e40a609b5db6fc42c83d9 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:ba58f46972b4a281f987239e942d0c7f, Read QC Activity for nmdc:mga0af2c17 +INFO:root:PassingDataObject: nmdc:f6d3d42f11db1a5c0567735a0f0eb3ec +INFO:root:PassingDataObject: nmdc:00506c297b97ed6e497c31b7e08e8826 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:86d73e42a0821f84b71576c86db5b3ef, Read QC Activity for nmdc:mga03sr017 +INFO:root:PassingDataObject: nmdc:ddbdd041e703f1069e0df6c093917057 +INFO:root:PassingDataObject: nmdc:0a546003f09e8b7456c24fe49d9934b9 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452564 +INFO:root:found 4 records +INFO:root:record: nmdc:e4ae0b239de3c71d5f5b541a2e2add9c, ReadBased Analysis Activity for nmdc:mga05pqa95 +INFO:root:PassingDataObject: nmdc:bcc9d82ba42996a434182c100288c92f +INFO:root:PassingDataObject: nmdc:e4639e45fc3c714086ed06411325429e +INFO:root:PassingDataObject: nmdc:edac51feea05a7654b9500fc00451326 +INFO:root:PassingDataObject: nmdc:c5bab81f66a45d6e95f026f713d8840c +INFO:root:PassingDataObject: nmdc:47282de9de2d20de2ae28f6a6c9a712f +INFO:root:PassingDataObject: nmdc:6238f9358f45b837bd661a09ac2f6d43 +INFO:root:PassingDataObject: nmdc:ba03e4d71eb72242c993cd967e76d78e +INFO:root:PassingDataObject: nmdc:090f4c36028159211f76e1c0c37215df +INFO:root:PassingDataObject: nmdc:4a4040aaa947c5d14f76962847bef4ae +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:ba58f46972b4a281f987239e942d0c7f, ReadBased Analysis Activity for nmdc:mga0af2c17 +INFO:root:PassingDataObject: nmdc:a3873dc160fc136b9948443b0b944523 +INFO:root:PassingDataObject: nmdc:91128b34d8215eb27052a7e216b4734f +INFO:root:PassingDataObject: nmdc:4e17e8f21164ae3bfc9dc158e987630a +INFO:root:PassingDataObject: nmdc:43058c6fd20cf8a6faf6be6e5dd532f1 +INFO:root:PassingDataObject: nmdc:1372f4dfe9ea81148f222bedafbc1d2e +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:ba58f46972b4a281f987239e942d0c7f +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:ba58f46972b4a281f987239e942d0c7f +ERROR:root:FailedDataObject: nmdc:6ac3ead9ee47372e9455a7e2d6140dbc, +ERROR:root:FailedDataObject: nmdc:5547c1115114f9bcf9ae1945a485e74c, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ba58f46972b4a281f987239e942d0c7f, ReadBased Analysis Activity for nmdc:mga0af2c17 +INFO:root:record: nmdc:86d73e42a0821f84b71576c86db5b3ef, ReadBased Analysis Activity for nmdc:mga03sr017 +INFO:root:PassingDataObject: nmdc:7e35e2140197b2018d95b290fa093b50 +INFO:root:PassingDataObject: nmdc:aa4b0c38e1ca714c2f2c3b3d56eb833e +INFO:root:PassingDataObject: nmdc:d17a19ab3dde2ad6e80f556dd229d801 +INFO:root:PassingDataObject: nmdc:76b38ea1763dbe0cfee0ee343576b611 +INFO:root:PassingDataObject: nmdc:0010d322942f8e0ed830b6d0600a0b90 +INFO:root:PassingDataObject: nmdc:1b7bfc4f8ce4aa2a748c3233ee123ce6 +INFO:root:PassingDataObject: nmdc:c2ab35742ac1f6af29bc6fa9be370484 +INFO:root:PassingDataObject: nmdc:dd20f7addef5eb78df7d6af462860525 +INFO:root:PassingDataObject: nmdc:43faa226ec36f421a8bc15cd57707cb3 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:d4fae2dd707f8a402da92db55b46fd8a, ReadBased Analysis Activity for nmdc:mga0zp7252 +INFO:root:PassingDataObject: nmdc:c4e412dc85dcbdd5c76cffa4fab9626f +INFO:root:PassingDataObject: nmdc:5aaf6797a9fb6dcabc71242c89c1c204 +INFO:root:PassingDataObject: nmdc:2f8cbe5eb06b5c1bc141c37c700f9aa3 +INFO:root:PassingDataObject: nmdc:44f6e7ed158ec66fa66c7dcb5c049ca0 +INFO:root:PassingDataObject: nmdc:561d57e34cb8bc1dfc69eba371e4d6a9 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:d4fae2dd707f8a402da92db55b46fd8a +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:d4fae2dd707f8a402da92db55b46fd8a +ERROR:root:FailedDataObject: nmdc:207eb08e2c4e4d693090964d043a0274, +ERROR:root:FailedDataObject: nmdc:2a0063755fb75b10a52f93f43e73ac38, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d4fae2dd707f8a402da92db55b46fd8a, ReadBased Analysis Activity for nmdc:mga0zp7252 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452564 +INFO:root:found 4 records +INFO:root:record: nmdc:e4ae0b239de3c71d5f5b541a2e2add9c, Assembly Activity for nmdc:mga05pqa95 +INFO:root:PassingDataObject: nmdc:5c8a7758bc0ed88a1a263e0fee0cd2a6 +INFO:root:PassingDataObject: nmdc:b74a3800808a91bc0b589fbe9e9eb144 +INFO:root:PassingDataObject: nmdc:b214b2fe85d89d333ee7ac060422b38e +INFO:root:PassingDataObject: nmdc:f254bb938a82a0b1d84da23ea20568ed +INFO:root:PassingDataObject: nmdc:9fcd2d6a53bcd2bb79e53856db4c495f +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:ba58f46972b4a281f987239e942d0c7f, Assembly Activity for nmdc:mga0af2c17 +INFO:root:PassingDataObject: nmdc:8689607d452490453769e27fc1a2154e +INFO:root:PassingDataObject: nmdc:97de22a7a3520503fbdfc1853548a733 +INFO:root:PassingDataObject: nmdc:4aaf8fbf712ceeb1eac1c6fc9c0b2cba +INFO:root:PassingDataObject: nmdc:79f08b4fc602cfa10f202e49b524d996 +INFO:root:PassingDataObject: nmdc:ba88b56f995828742074610a19ca03ac +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:86d73e42a0821f84b71576c86db5b3ef, Assembly Activity for nmdc:mga03sr017 +INFO:root:PassingDataObject: nmdc:919b21e36a2e28c330c9f175e7763e50 +INFO:root:PassingDataObject: nmdc:f6da77eafc4a7bc36a1ea705851f78a9 +INFO:root:PassingDataObject: nmdc:e8d33272992fe35b4afc751260b7a41e +INFO:root:PassingDataObject: nmdc:456d8154a204352e4568b94f7eabf161 +INFO:root:PassingDataObject: nmdc:b7435a73d9779e0e68dcd78287d66aed +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:d4fae2dd707f8a402da92db55b46fd8a, Assembly Activity for nmdc:mga0zp7252 +INFO:root:PassingDataObject: nmdc:8f81ab2a3528297a8a8e17cd96725e3c +INFO:root:PassingDataObject: nmdc:f7285a5c1e4093132c7fb498beb332d0 +INFO:root:PassingDataObject: nmdc:6845de37366faf34afccf03fa32b9fcb +INFO:root:PassingDataObject: nmdc:a44ae57a70e6c369bc0cd26ab7eabb1e +INFO:root:PassingDataObject: nmdc:244d4c235b46d190f3be120a247182b6 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452564 +INFO:root:found 4 records +INFO:root:record: nmdc:d4fae2dd707f8a402da92db55b46fd8a, Annotation Activity for nmdc:mga0zp7252 +INFO:root:PassingDataObject: nmdc:54b7bad138f126b1e7d5935b8da99de9 +INFO:root:PassingDataObject: nmdc:a7cd57b0590d342d5ab1daf465456cfd +INFO:root:PassingDataObject: nmdc:3c20e02d47e1d52e8ecfba2da36d0a33 +INFO:root:PassingDataObject: nmdc:0f463dec1b9717b3b762c2ae80776640 +INFO:root:PassingDataObject: nmdc:b86ec2981864418481b16631dd8bdf47 +INFO:root:PassingDataObject: nmdc:3a3b952adac9b9ac66075e841ed423ea +INFO:root:PassingDataObject: nmdc:04199d597e0f70b40421b08e45b119f5 +INFO:root:PassingDataObject: nmdc:e8cb764225986cb316d2765f4bfe3dbb +INFO:root:PassingDataObject: nmdc:0c3c18e44d2ccc810083df6e59cfbdd0 +INFO:root:PassingDataObject: nmdc:b09ff33ed4bd589605f6b5112ee7dfc3 +INFO:root:PassingDataObject: nmdc:17313fafc4ea64c8ff8b4b4558e9a229 +INFO:root:PassingDataObject: nmdc:c74470bba1e3198986d1b76bb1b90293 +INFO:root:PassingDataObject: nmdc:2f36eeacb6e4573e72f737c922adc920 +INFO:root:PassingDataObject: nmdc:35d61b0b13f1858df220f26f76df965c +INFO:root:PassingDataObject: nmdc:35f4f325ebbb5ac6fb43dca3eef1beb7 +INFO:root:PassingDataObject: nmdc:cd22c25ac57c1eccd5d402978cd302a9 +INFO:root:PassingDataObject: nmdc:3290915daac99920a04c189efd750dd6 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:d4fae2dd707f8a402da92db55b46fd8a +ERROR:root:FailedDataObject: nmdc:ab45e2586200f2912e6f0465724c759e, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d4fae2dd707f8a402da92db55b46fd8a, Annotation Activity for nmdc:mga0zp7252 +INFO:root:record: nmdc:e4ae0b239de3c71d5f5b541a2e2add9c, Annotation Activity for nmdc:mga05pqa95 +INFO:root:PassingDataObject: nmdc:3ba7d4749cf54b5b0d8af135c225dbc2 +INFO:root:PassingDataObject: nmdc:595a95cf52a12d4a5a1dce7f7cc93d10 +INFO:root:PassingDataObject: nmdc:a249081d9a90f6f0daa62cec1e87aae9 +INFO:root:PassingDataObject: nmdc:d9e85e422b0d4e926b69e0bd1224bd83 +INFO:root:PassingDataObject: nmdc:a0ee875335191a5e8c779da6c3aeec67 +INFO:root:PassingDataObject: nmdc:65b18dd13b41109bc92e55bb4963f6e0 +INFO:root:PassingDataObject: nmdc:f5b96ea90a15f10ce6fbf06abb528a49 +INFO:root:PassingDataObject: nmdc:6c5f52aff7ad3c6cbc3847455f9e3aaa +INFO:root:PassingDataObject: nmdc:c5613087a100db3f30d6c51e345d26c7 +INFO:root:PassingDataObject: nmdc:1e40cd1623455347eb7066464e7a9dd9 +INFO:root:PassingDataObject: nmdc:212589296fbbd95932cf0b72da838485 +INFO:root:PassingDataObject: nmdc:850807060df9c152f526bbd85accb2c7 +INFO:root:PassingDataObject: nmdc:882387282b659dd141c00ba203e644cd +INFO:root:PassingDataObject: nmdc:b686198068ce8d7d46689dadece57695 +INFO:root:PassingDataObject: nmdc:36a8afe78f58bc837625145e54b00b0c +INFO:root:PassingDataObject: nmdc:ba60a3cfd290a87414512929c0d951e8 +INFO:root:PassingDataObject: nmdc:158bab40cf7bce7bf7831359890f262c +INFO:root:PassingDataObject: nmdc:affd8369609a9d5a6bc4645e7858c3c2 +INFO:root:PassingDataObject: nmdc:fa1ef59d6990f69aa1a2d7df24a1476a +INFO:root:PassingDataObject: nmdc:8a44562dc6126c59d88c6a00b6768bcc +INFO:root:PassingDataObject: nmdc:9ddf87c53a1dcb3177f4b06a97140e3f +INFO:root:PassingDataObject: nmdc:8cea2206ec1c425af42f599d3430641e +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:ba58f46972b4a281f987239e942d0c7f, Annotation Activity for nmdc:mga0af2c17 +INFO:root:PassingDataObject: nmdc:aaf4e69ea3f9fb0a3d77a09ebe91f4b7 +INFO:root:PassingDataObject: nmdc:478e7030c7d4c667cc2fab48713b1e25 +INFO:root:PassingDataObject: nmdc:c9fdad9bc0c65267cceaae75a7abd6f0 +INFO:root:PassingDataObject: nmdc:b582c0c2d35058317b86e7d0f000fd4b +INFO:root:PassingDataObject: nmdc:7fab5a71e36407224f34a39628a5f6ed +INFO:root:PassingDataObject: nmdc:307b38281cc7129f6ae348ef99469557 +INFO:root:PassingDataObject: nmdc:f424631f9f30c252a5369d5e81d8ff39 +INFO:root:PassingDataObject: nmdc:40227ede578277affd158a3c3e42fd60 +INFO:root:PassingDataObject: nmdc:b7c523573a2a4f6836e07a70bc4e81b2 +INFO:root:PassingDataObject: nmdc:be2a70d59665c12ccfb9f184af36917a +INFO:root:PassingDataObject: nmdc:fb073165a3efd0d4f1925f9695b9d984 +INFO:root:PassingDataObject: nmdc:9472eb1699f2263dbceaa0fd820b9e0b +INFO:root:PassingDataObject: nmdc:f0beb78dbc293fac5c8e593203590b0a +INFO:root:PassingDataObject: nmdc:3fdd7048164971dd2df40eae38214424 +INFO:root:PassingDataObject: nmdc:d2f1b2644a0ad4cf847119377f8904fa +INFO:root:PassingDataObject: nmdc:f99fe55a018125011ad3136e516ba75a +INFO:root:PassingDataObject: nmdc:daddc240f4ceab5dffe29dd0470803f9 +INFO:root:PassingDataObject: nmdc:b8d9a906a61b056040faeb93eb620823 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:ba58f46972b4a281f987239e942d0c7f +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ba58f46972b4a281f987239e942d0c7f, Annotation Activity for nmdc:mga0af2c17 +INFO:root:record: nmdc:86d73e42a0821f84b71576c86db5b3ef, Annotation Activity for nmdc:mga03sr017 +INFO:root:PassingDataObject: nmdc:a66fa7d2d5244412fa67c55b1a0ea7e5 +INFO:root:PassingDataObject: nmdc:44253a7f24aec6eb0b5684b7fb13e05c +INFO:root:PassingDataObject: nmdc:268a4c2527f12d2acd2c12c804aad29a +INFO:root:PassingDataObject: nmdc:eddce2f3a69d386e3c5dcba80c3134f2 +INFO:root:PassingDataObject: nmdc:31e2e69cffdacff270fb5a0fcc62bbf3 +INFO:root:PassingDataObject: nmdc:e90e808e4d4603a6e863707afee4239d +INFO:root:PassingDataObject: nmdc:6159d58303fc59e390aea3514d13e978 +INFO:root:PassingDataObject: nmdc:534c8227d64d2a46c4cd1504de64b5f9 +INFO:root:PassingDataObject: nmdc:c48db77fd6669ee3310bb39a1dc99980 +INFO:root:PassingDataObject: nmdc:6cd6c7556bd58fa20f373657efda6456 +INFO:root:PassingDataObject: nmdc:27d593462e6a71345e237c53b67fa4f4 +INFO:root:PassingDataObject: nmdc:9af687b28ca900e771886237f5be8a49 +INFO:root:PassingDataObject: nmdc:197c51f1f29bd449c480dcaaddf7cb70 +INFO:root:PassingDataObject: nmdc:f3d6714911537eacb9ee7f8c92830642 +INFO:root:PassingDataObject: nmdc:a216608694c3e6429a346ba097710e06 +INFO:root:PassingDataObject: nmdc:2ff161c13ec25a10d00e0faa57f4805c +INFO:root:PassingDataObject: nmdc:1c4cc02a50560f98226a813b2965b18f +INFO:root:PassingDataObject: nmdc:3d99264b48952b6f80d55aa4ae6f16cc +INFO:root:PassingDataObject: nmdc:a95cae66f5b2a98edf3bfc272ac9947c +INFO:root:PassingDataObject: nmdc:e6389a50c00520bb95096014be384a33 +INFO:root:PassingDataObject: nmdc:45c1ce525a150262f80d915474a26b23 +INFO:root:PassingDataObject: nmdc:063891f7a0975f8c4f073e1ac8d3a70d +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452564 +INFO:root:found 4 records +INFO:root:record: nmdc:e4ae0b239de3c71d5f5b541a2e2add9c, MAGs Analysis Activity for nmdc:mga05pqa95 +INFO:root:PassingDataObject: nmdc:831467e29ab2fe4744bcb61bf4615956 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e4ae0b239de3c71d5f5b541a2e2add9c +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e4ae0b239de3c71d5f5b541a2e2add9c, MAGs Analysis Activity for nmdc:mga05pqa95 +INFO:root:record: nmdc:86d73e42a0821f84b71576c86db5b3ef, MAGs Analysis Activity for nmdc:mga03sr017 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:86d73e42a0821f84b71576c86db5b3ef +ERROR:root:FailedDataObject: nmdc:4040334c795d21db1c7fc4c5cb4298e8, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:86d73e42a0821f84b71576c86db5b3ef, MAGs Analysis Activity for nmdc:mga03sr017 +INFO:root:record: nmdc:ba58f46972b4a281f987239e942d0c7f, MAGs Analysis Activity for nmdc:mga0af2c17 +INFO:root:PassingDataObject: nmdc:00099f6decdc17b3c1940b4396224e41 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:ba58f46972b4a281f987239e942d0c7f +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ba58f46972b4a281f987239e942d0c7f, MAGs Analysis Activity for nmdc:mga0af2c17 +INFO:root:record: nmdc:d4fae2dd707f8a402da92db55b46fd8a, MAGs Analysis Activity for nmdc:mga0zp7252 +INFO:root:PassingDataObject: nmdc:a36a379bc2a61f84ad77258c91663041 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:d4fae2dd707f8a402da92db55b46fd8a +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d4fae2dd707f8a402da92db55b46fd8a, MAGs Analysis Activity for nmdc:mga0zp7252 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452564 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-xf3qmp78 +INFO:root:legacy_id: gold:Gp0452641 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-xf3qmp78 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:99d20bb2d5170eada8bc09733bffe2f7 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:77dc15ac74bc8682b189c1fff8f55a18 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:51e2b134238ed340ff2a5198de6283c4 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:ff6e9db319d9530b3ec17a8cfa9519e5 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452641 +INFO:root:found 4 records +INFO:root:record: nmdc:d36ce032cd7227f7ac1dd5f0b3686468, Read QC Activity for nmdc:mga0y90j12 +INFO:root:PassingDataObject: nmdc:a404248a3acd1b68f2d409da5a834650 +INFO:root:PassingDataObject: nmdc:ece3bd67980774fb394a1b297c436cb0 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:2ef76f18e76a9ac379c1a21d6669aac3, Read QC Activity for nmdc:mga0746f80 +INFO:root:PassingDataObject: nmdc:dbdc018d735a210a6fff23bafae77367 +INFO:root:PassingDataObject: nmdc:1ba2d52f1704a3969bd871493a51ad6a +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:e794e090c460de0d3255da21d1d5628e, Read QC Activity for nmdc:mga02r9c74 +INFO:root:PassingDataObject: nmdc:1b6f07242a2ea2c26b1989cb4d1130cf +INFO:root:PassingDataObject: nmdc:ae3a027031793d93c04756fdacf3907d +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:a1d0f5db097bc014964d4e51b4ce60dc, Read QC Activity for nmdc:mga07f5p22 +INFO:root:PassingDataObject: nmdc:01f1ab942b6f98b2a2ec6556860523db +INFO:root:PassingDataObject: nmdc:ac40ab6cfd4420c7af0fbe8056c00f50 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452641 +INFO:root:found 4 records +INFO:root:record: nmdc:d36ce032cd7227f7ac1dd5f0b3686468, ReadBased Analysis Activity for nmdc:mga0y90j12 +INFO:root:PassingDataObject: nmdc:ecf04252170c9ff0ba8a693748b2e60b +INFO:root:PassingDataObject: nmdc:eed697a911a9b3ed7a6257621f8412ea +INFO:root:PassingDataObject: nmdc:b839eb747ea238f57bc8bfb0de3861b6 +INFO:root:PassingDataObject: nmdc:f537c073ac18303f4d959567bc3152c7 +INFO:root:PassingDataObject: nmdc:57c1f4ca1f2727ac1a9f3e5a12847b8f +INFO:root:PassingDataObject: nmdc:c11a32f98beddc16dd23640032df8ed2 +INFO:root:PassingDataObject: nmdc:c8733a34b02da8d24948fd1b9fa0e603 +INFO:root:PassingDataObject: nmdc:377d6ab7623774a1031cb27593ae8bb1 +INFO:root:PassingDataObject: nmdc:fd11a56d8a289c0b97d9dd80d5d89d49 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:2ef76f18e76a9ac379c1a21d6669aac3, ReadBased Analysis Activity for nmdc:mga0746f80 +INFO:root:PassingDataObject: nmdc:cf708fbae42f610d1d0d128373d38b4a +INFO:root:PassingDataObject: nmdc:48bb866f24b762d2d234364ddccc603f +INFO:root:PassingDataObject: nmdc:892b74feeb0a4d5fe1dd0c27cb09c4d2 +INFO:root:PassingDataObject: nmdc:46c605fe8c8540ffb2a181c49e41ccc4 +INFO:root:PassingDataObject: nmdc:1d0f5f21efab48f0ab837e0071ee0249 +INFO:root:PassingDataObject: nmdc:f8463edf36f651d39583d0ac8a584c7b +INFO:root:PassingDataObject: nmdc:68c0af7e66e82b97039e916e2bd8185f +INFO:root:PassingDataObject: nmdc:1359eec1858ea0cd63ba9597ed87eb21 +INFO:root:PassingDataObject: nmdc:26d0a0a2435f31cda0598ed7fb6ee9a0 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:e794e090c460de0d3255da21d1d5628e, ReadBased Analysis Activity for nmdc:mga02r9c74 +INFO:root:PassingDataObject: nmdc:7cb965752e62b6830f7790a4ee5f44b4 +INFO:root:PassingDataObject: nmdc:be01a211ee576d0047043a8a6912a0c6 +INFO:root:PassingDataObject: nmdc:dec1cbf86133ff53d7b576cc95aa11bd +INFO:root:PassingDataObject: nmdc:9554d5f6b16be01adbaacbea6ec13d0c +INFO:root:PassingDataObject: nmdc:4f1c99ad27cb85a44725e0088c81002a +INFO:root:PassingDataObject: nmdc:63276331c0655a54c25b74b5f6d70a6b +INFO:root:PassingDataObject: nmdc:7e23b20830f5de790a578683cd807417 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:e794e090c460de0d3255da21d1d5628e +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:e794e090c460de0d3255da21d1d5628e +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e794e090c460de0d3255da21d1d5628e, ReadBased Analysis Activity for nmdc:mga02r9c74 +INFO:root:record: nmdc:a1d0f5db097bc014964d4e51b4ce60dc, ReadBased Analysis Activity for nmdc:mga07f5p22 +INFO:root:PassingDataObject: nmdc:225b6e28f7a6fdcbd1cbc0fe9a9c08b8 +INFO:root:PassingDataObject: nmdc:e5df6df6b0cff667571a79a0b353f615 +INFO:root:PassingDataObject: nmdc:37948d1d94d8eab779ac7540e66f7512 +INFO:root:PassingDataObject: nmdc:752b8145f8b64cf2abe69c2bdb0b33f3 +INFO:root:PassingDataObject: nmdc:570839a93cf805bc109113e9b9cecdea +INFO:root:PassingDataObject: nmdc:f7a04fa88eec21dfa7ef9f9ee5731b99 +INFO:root:PassingDataObject: nmdc:65e2fe9c3849efd71a9138b42999a696 +INFO:root:PassingDataObject: nmdc:addbb8fb60d01b4bb126dbcacd8ebec0 +INFO:root:PassingDataObject: nmdc:7f752fb4feb919c85eb90a50eeed2ff5 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452641 +INFO:root:found 4 records +INFO:root:record: nmdc:a1d0f5db097bc014964d4e51b4ce60dc, Assembly Activity for nmdc:mga07f5p22 +INFO:root:PassingDataObject: nmdc:1dac6277001801cf8dc16abbe75f3737 +INFO:root:PassingDataObject: nmdc:017fc35ff598908f83ca5fb0fde9110b +INFO:root:PassingDataObject: nmdc:3e29a385e1a1ffe529afa08eece8fddf +INFO:root:PassingDataObject: nmdc:6d68a48fda84cf1372ec79b764a75224 +INFO:root:PassingDataObject: nmdc:41b036b64b8b84717e83d6c6bf92ffb5 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:d36ce032cd7227f7ac1dd5f0b3686468, Assembly Activity for nmdc:mga0y90j12 +INFO:root:PassingDataObject: nmdc:1d4922ef9f5d65d90d86ec5605806ff1 +INFO:root:PassingDataObject: nmdc:ba9a00bd9de572d97308d58e42f6eab4 +INFO:root:PassingDataObject: nmdc:5db68945624051f3855ecc0a5cb97f18 +INFO:root:PassingDataObject: nmdc:8a75f2f836a3b41726a95e4713dd4f8f +INFO:root:PassingDataObject: nmdc:17da0a37b19ab29f2a787b23eb11d9ef +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:e794e090c460de0d3255da21d1d5628e, Assembly Activity for nmdc:mga02r9c74 +INFO:root:PassingDataObject: nmdc:b5e2638e112979e05ed28cc0c9246425 +INFO:root:PassingDataObject: nmdc:c71d8dc2124c844f8a8eea042930e959 +INFO:root:PassingDataObject: nmdc:32c504f5cddcc8dbf20ae85bb0f38374 +INFO:root:PassingDataObject: nmdc:fdfafde3840b8466e59bbbb23bc936be +INFO:root:PassingDataObject: nmdc:94079a899abf13effecc88a56dcfaa28 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:2ef76f18e76a9ac379c1a21d6669aac3, Assembly Activity for nmdc:mga0746f80 +INFO:root:PassingDataObject: nmdc:fb88715fcd3ef32542f0e1b322918d17 +INFO:root:PassingDataObject: nmdc:3628913bd6444e00bd043a18bf6f9ce3 +INFO:root:PassingDataObject: nmdc:2188f0a729069abf1aa44c9f293f5d20 +INFO:root:PassingDataObject: nmdc:38bf97666a20995f097ffabd2c47f6eb +INFO:root:PassingDataObject: nmdc:0ad728384ec56af1efaf9efca556956c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452641 +INFO:root:found 4 records +INFO:root:record: nmdc:d36ce032cd7227f7ac1dd5f0b3686468, Annotation Activity for nmdc:mga0y90j12 +INFO:root:PassingDataObject: nmdc:fd7a9ef8bbcbf6513dabe2c51ec5bfa5 +INFO:root:PassingDataObject: nmdc:faebdeceb15001135041f981549d83bb +INFO:root:PassingDataObject: nmdc:5f0d2764a06e3346a95988f836d6ab57 +INFO:root:PassingDataObject: nmdc:3b1c3b865351529cbee80fcb1054fce2 +INFO:root:PassingDataObject: nmdc:6f8af1cb7a5009c0c01ab84e5d6525cd +INFO:root:PassingDataObject: nmdc:5ca0bda7e647435bc3101e042b4f6384 +INFO:root:PassingDataObject: nmdc:1826e4e5499d5bacb8fba40ec152f790 +INFO:root:PassingDataObject: nmdc:62c0e87245d76845d7ef27c58e83780f +INFO:root:PassingDataObject: nmdc:3b8f85f009e3ab9da1c79daa1e8c0910 +INFO:root:PassingDataObject: nmdc:ae3c595ad63aa2814ef6f0740facaa34 +INFO:root:PassingDataObject: nmdc:9599c75c1e098f8bec6e988a4f10d3ad +INFO:root:PassingDataObject: nmdc:29732f6776488562ae5985462a3cacb5 +INFO:root:PassingDataObject: nmdc:75c503213df5c02733393e302ff6b0bb +INFO:root:PassingDataObject: nmdc:7745644f0718a02a2dccd869b781c1da +INFO:root:PassingDataObject: nmdc:f381fe30e3b7167b91414ee6b2f0b6ab +INFO:root:PassingDataObject: nmdc:b8e5260b6e57d97d0f9651047e199da3 +INFO:root:PassingDataObject: nmdc:2038536780b9b27fb3490bec1dca6fd5 +INFO:root:PassingDataObject: nmdc:e701c9c132ea13386d507f6456371631 +INFO:root:PassingDataObject: nmdc:4b248dbae6c33d0c2911a1baf79b90a5 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:d36ce032cd7227f7ac1dd5f0b3686468 +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d36ce032cd7227f7ac1dd5f0b3686468, Annotation Activity for nmdc:mga0y90j12 +INFO:root:record: nmdc:e794e090c460de0d3255da21d1d5628e, Annotation Activity for nmdc:mga02r9c74 +INFO:root:PassingDataObject: nmdc:4cd9554f20f9bd39087746de89d69ff4 +INFO:root:PassingDataObject: nmdc:0d94322f690f04d0ebce3adb23b12c15 +INFO:root:PassingDataObject: nmdc:4ada5728cc801fd07390be967fec563e +INFO:root:PassingDataObject: nmdc:ea0f810fd7c376c5f827bf937e3593ed +INFO:root:PassingDataObject: nmdc:238f332db367ad7fc781eaaf37027c8a +INFO:root:PassingDataObject: nmdc:eba2742482c4b34b1606a0bbb21eddde +INFO:root:PassingDataObject: nmdc:067430b57a18dc672deed742a8e72eeb +INFO:root:PassingDataObject: nmdc:18198cbb43582a0496e69f58f7771add +INFO:root:PassingDataObject: nmdc:894abdfb2c9b6159980b346feafccd72 +INFO:root:PassingDataObject: nmdc:732ac48b61431d576f99c4aeba6e2b94 +INFO:root:PassingDataObject: nmdc:b3b6d1b119c5402b4da9f17329ec0fca +INFO:root:PassingDataObject: nmdc:784d8339f8692d8b04de678504fb5d63 +INFO:root:PassingDataObject: nmdc:30cf0b89b9ae96c2fa334fde6c027423 +INFO:root:PassingDataObject: nmdc:22e0b50858458953a88ca7717824a6be +INFO:root:PassingDataObject: nmdc:fde8c4b703c19d9925c06aad50ade2a1 +INFO:root:PassingDataObject: nmdc:93774eb2de1219cfcd13aaf25c71e8c6 +INFO:root:PassingDataObject: nmdc:4607ce0f8188f9c48b7d9e77d7c71dfe +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:e794e090c460de0d3255da21d1d5628e +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e794e090c460de0d3255da21d1d5628e, Annotation Activity for nmdc:mga02r9c74 +INFO:root:record: nmdc:a1d0f5db097bc014964d4e51b4ce60dc, Annotation Activity for nmdc:mga07f5p22 +INFO:root:PassingDataObject: nmdc:7df2274c6307e35222479eeb97c5f63e +INFO:root:PassingDataObject: nmdc:dffd62a4c1ceb5b578d8cdf286d5895e +INFO:root:PassingDataObject: nmdc:452f835fb01b8bb6f46cbe025d55456f +INFO:root:PassingDataObject: nmdc:da5a0d88bd629ce94b837bdd9a2d3452 +INFO:root:PassingDataObject: nmdc:ea084d473d30a2fd289f033ffff8eb1e +INFO:root:PassingDataObject: nmdc:8e0b3944d7a8537c093f1f6e4ca9a526 +INFO:root:PassingDataObject: nmdc:00dec34d04917c85f5ad4f15e1162358 +INFO:root:PassingDataObject: nmdc:a625f5cb5951f9c0f91cd6fce259b0fc +INFO:root:PassingDataObject: nmdc:6e72ef561cf263ae8da37e153127ca38 +INFO:root:PassingDataObject: nmdc:ada0c9f0045385bf8227f30ba0be49da +INFO:root:PassingDataObject: nmdc:b6cab552196c47ee64e35a1c80e39d30 +INFO:root:PassingDataObject: nmdc:7c6cee151b2ecc6b4193a3c68d0cbcca +INFO:root:PassingDataObject: nmdc:029cd3fc96d8d618db8104c6b7eb3368 +INFO:root:PassingDataObject: nmdc:2461b7b2c502832de4ef2a7406741a20 +INFO:root:PassingDataObject: nmdc:4beff413a7d593c2fc72d244a3d9eb97 +INFO:root:PassingDataObject: nmdc:5faa8d4def9dab30471f2e14f2020822 +INFO:root:PassingDataObject: nmdc:ce7258887a3cf32211b0c388ad60f60f +INFO:root:PassingDataObject: nmdc:7fdfb2092007cc156c2ea22d6a09ed59 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:a1d0f5db097bc014964d4e51b4ce60dc +ERROR:root:FailedDataObject: nmdc:2adeff89f51722ac3be9e60a76ea0115, +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a1d0f5db097bc014964d4e51b4ce60dc, Annotation Activity for nmdc:mga07f5p22 +INFO:root:record: nmdc:2ef76f18e76a9ac379c1a21d6669aac3, Annotation Activity for nmdc:mga0746f80 +INFO:root:PassingDataObject: nmdc:2f2e5df5ddc33aa28bfabc066b6e5546 +INFO:root:PassingDataObject: nmdc:d075cc8aab465ca0c6c266a77b22e3c7 +INFO:root:PassingDataObject: nmdc:6349dc22f41a64998107ba38332985e6 +INFO:root:PassingDataObject: nmdc:4f216950d7acbc2f45c27709ed59120f +INFO:root:PassingDataObject: nmdc:7871022aabe087e4fdc1b5ad649aae7f +INFO:root:PassingDataObject: nmdc:c2824cd15ba1449b530d38ddf5cb2e72 +INFO:root:PassingDataObject: nmdc:d1afe202a00afa0e4033e3d0955e7391 +INFO:root:PassingDataObject: nmdc:9e81fe74912b4d7ac18b1f07cb4d0aea +INFO:root:PassingDataObject: nmdc:9654be31b37a7e18b999ca2ff58923ad +INFO:root:PassingDataObject: nmdc:5b867174bd76aae1230ab869bcb2a5e3 +INFO:root:PassingDataObject: nmdc:24abe1a864956864533f4369b80b0a79 +INFO:root:PassingDataObject: nmdc:ae181af7f15d651465d9ecd5c0dff5a6 +INFO:root:PassingDataObject: nmdc:792247134e50f7e2bdf8905fae685b41 +INFO:root:PassingDataObject: nmdc:ddae332d165ecc85183414a39f720635 +INFO:root:PassingDataObject: nmdc:3a8d6be6d5158d9e4d191633df4328f1 +INFO:root:PassingDataObject: nmdc:d342805e740726b105aa533a42afeec5 +INFO:root:PassingDataObject: nmdc:38d7b337bd3f8bd7e9609234e544da8d +INFO:root:PassingDataObject: nmdc:1fbc6f58a9e10e196c44c88f736dd388 +INFO:root:PassingDataObject: nmdc:3f9a63b9689dbf89c5e8ca8964c84f33 +INFO:root:PassingDataObject: nmdc:7f052c013baeab98ffd0193a166b7f36 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:2ef76f18e76a9ac379c1a21d6669aac3 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2ef76f18e76a9ac379c1a21d6669aac3, Annotation Activity for nmdc:mga0746f80 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 4 +INFO:root:set_name: mags_activity_set for gold:Gp0452641 +INFO:root:found 4 records +INFO:root:record: nmdc:d36ce032cd7227f7ac1dd5f0b3686468, MAGs Analysis Activity for nmdc:mga0y90j12 +INFO:root:PassingDataObject: nmdc:d33ad86afd59d765982c8c0ee4edad56 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:d36ce032cd7227f7ac1dd5f0b3686468 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d36ce032cd7227f7ac1dd5f0b3686468, MAGs Analysis Activity for nmdc:mga0y90j12 +INFO:root:record: nmdc:a1d0f5db097bc014964d4e51b4ce60dc, MAGs Analysis Activity for nmdc:mga07f5p22 +INFO:root:PassingDataObject: nmdc:7d25329b8925dc9195bad30e6f5f9923 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a1d0f5db097bc014964d4e51b4ce60dc +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a1d0f5db097bc014964d4e51b4ce60dc, MAGs Analysis Activity for nmdc:mga07f5p22 +INFO:root:record: nmdc:2ef76f18e76a9ac379c1a21d6669aac3, MAGs Analysis Activity for nmdc:mga0746f80 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2ef76f18e76a9ac379c1a21d6669aac3 +ERROR:root:FailedDataObject: nmdc:dacd571dabb58bb2e2d42c3e4a4b92a9, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2ef76f18e76a9ac379c1a21d6669aac3, MAGs Analysis Activity for nmdc:mga0746f80 +INFO:root:record: nmdc:e794e090c460de0d3255da21d1d5628e, MAGs Analysis Activity for nmdc:mga02r9c74 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e794e090c460de0d3255da21d1d5628e +ERROR:root:FailedDataObject: nmdc:918c3ba952a1acc11a87eefd0da51367, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e794e090c460de0d3255da21d1d5628e, MAGs Analysis Activity for nmdc:mga02r9c74 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452641 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-zpn99058 +INFO:root:legacy_id: gold:Gp0452671 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zpn99058 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:f7f585f19c4c3d6001486f878c6abe70 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0f0aeca3324c59af528f6bece4fec4c6 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:0e5a209cb6bf2e452260e08bfb5a627d +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8aec84ae63fc82462726575f5bc3a906 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452671 +INFO:root:found 4 records +INFO:root:record: nmdc:de944aa427548d7d8853f486b48a22de, Read QC Activity for nmdc:mga0n78494 +INFO:root:PassingDataObject: nmdc:449d3c92d08e38839e9102b74136c951 +INFO:root:PassingDataObject: nmdc:16f8c28be7a3027c36ff5d8fc038e182 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:0260377e388537586dd4bc999b7d2430, Read QC Activity for nmdc:mga0f5q703 +INFO:root:PassingDataObject: nmdc:b66b8e1559ae8630d80c3675f528b302 +INFO:root:PassingDataObject: nmdc:58a86dd494d076b43657337ec696b1f9 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:38a36020de5449d0b6631dbf0f5c4143, Read QC Activity for nmdc:mga0pq6y95 +INFO:root:PassingDataObject: nmdc:9383b248ebfaacfba1123aab53fdac5f +INFO:root:PassingDataObject: nmdc:c56452cacd9a3e2dc8a63c0c0907069b +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:bc2f8885b7a9398b2e145f6177f140e2, Read QC Activity for nmdc:mga0p9g717 +INFO:root:PassingDataObject: nmdc:1f4bb9a589f74ee73e111699a7fddc18 +INFO:root:PassingDataObject: nmdc:5b9e0939a073db76fea4a2fd5b616eca +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452671 +INFO:root:found 4 records +INFO:root:record: nmdc:de944aa427548d7d8853f486b48a22de, ReadBased Analysis Activity for nmdc:mga0n78494 +INFO:root:PassingDataObject: nmdc:569909acdb96701ce31b1c50351e1b13 +INFO:root:PassingDataObject: nmdc:47b3ec692758f939454c535d48d97005 +INFO:root:PassingDataObject: nmdc:b4b2c51740dfe9881d0c04930afb36fb +INFO:root:PassingDataObject: nmdc:141c326baf3aaf92bfba66176d936652 +INFO:root:PassingDataObject: nmdc:1fb98fb88f804eb56274ccbd1a59966e +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:de944aa427548d7d8853f486b48a22de +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:de944aa427548d7d8853f486b48a22de +ERROR:root:FailedDataObject: nmdc:8fbe11edf6198e324734b93648a1e892, +ERROR:root:FailedDataObject: nmdc:bb18df6bb3ee2e6f829cf88b72efea79, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:de944aa427548d7d8853f486b48a22de, ReadBased Analysis Activity for nmdc:mga0n78494 +INFO:root:record: nmdc:38a36020de5449d0b6631dbf0f5c4143, ReadBased Analysis Activity for nmdc:mga0pq6y95 +INFO:root:PassingDataObject: nmdc:d92a67881fca065d928b6eb6d8ad8e6c +INFO:root:PassingDataObject: nmdc:7a00e600fe08214541ab6f6a629d5ed8 +INFO:root:PassingDataObject: nmdc:c9d3d4de3b5b403507cdf353c740b3fd +INFO:root:PassingDataObject: nmdc:1e238a9060bea6deff944a34e243a608 +INFO:root:PassingDataObject: nmdc:cd4dbaf79f865b8137e7fcf4e7e0738e +INFO:root:PassingDataObject: nmdc:c9d3c8648bc7f2967f7c03685692ab90 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:38a36020de5449d0b6631dbf0f5c4143 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:38a36020de5449d0b6631dbf0f5c4143 +ERROR:root:FailedDataObject: nmdc:0b35266d019e2e15aa128f7da5b6da18, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:38a36020de5449d0b6631dbf0f5c4143, ReadBased Analysis Activity for nmdc:mga0pq6y95 +INFO:root:record: nmdc:0260377e388537586dd4bc999b7d2430, ReadBased Analysis Activity for nmdc:mga0f5q703 +INFO:root:PassingDataObject: nmdc:0b8d2c01ae8d96745e316a93f48b7eb9 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:0260377e388537586dd4bc999b7d2430 +ERROR:root:FailedDataObject: nmdc:ba10fa3783ebe32394a0eb582e2f1a19, +ERROR:root:FailedDataObject: nmdc:54f290efb4e5fd4585cff31f8033a3eb, +ERROR:root:FailedDataObject: nmdc:ab51b356fe3bcdaf4353ffcf1e520ab7, +ERROR:root:FailedDataObject: nmdc:ae559ddeaa5032953a77fe41c4c56f65, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:0260377e388537586dd4bc999b7d2430 +ERROR:root:FailedDataObject: nmdc:e811f9b1802d5d968f19c828dc98418c, +ERROR:root:FailedDataObject: nmdc:15e92eab02f4b5bd3b3c0c4e898af236, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0260377e388537586dd4bc999b7d2430, ReadBased Analysis Activity for nmdc:mga0f5q703 +INFO:root:record: nmdc:bc2f8885b7a9398b2e145f6177f140e2, ReadBased Analysis Activity for nmdc:mga0p9g717 +INFO:root:PassingDataObject: nmdc:f1f9eac5abbe212d3e6b74d330e26ce0 +INFO:root:PassingDataObject: nmdc:b4b7dfee2af46626dd3a99554c64a861 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:bc2f8885b7a9398b2e145f6177f140e2 +ERROR:root:FailedDataObject: nmdc:5f8e643db208b829f996258885375343, +ERROR:root:FailedDataObject: nmdc:eae63d8d61588cf3329f3be208361458, +ERROR:root:FailedDataObject: nmdc:07d0c454de89e70531ef4b18e5937606, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:bc2f8885b7a9398b2e145f6177f140e2 +ERROR:root:FailedDataObject: nmdc:bd5bce52a599d5ce819c224cff8b735e, +ERROR:root:FailedDataObject: nmdc:68a6d58e82371606e49ae7f2f0788e11, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bc2f8885b7a9398b2e145f6177f140e2, ReadBased Analysis Activity for nmdc:mga0p9g717 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 4 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452671 +INFO:root:found 4 records +INFO:root:record: nmdc:0260377e388537586dd4bc999b7d2430, Assembly Activity for nmdc:mga0f5q703 +INFO:root:PassingDataObject: nmdc:96e534a922f217baf79749d54d244c35 +INFO:root:PassingDataObject: nmdc:b680ed8dacb55212b4b05f72531a8f65 +INFO:root:PassingDataObject: nmdc:fa1976ab2270e6d70c54355a9ad14cef +INFO:root:PassingDataObject: nmdc:fd8f59eec1e5acf5269b001ffb42bc80 +INFO:root:PassingDataObject: nmdc:bfc4df7f56c86d4abf1b7d17a79dd16e +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:de944aa427548d7d8853f486b48a22de, Assembly Activity for nmdc:mga0n78494 +INFO:root:PassingDataObject: nmdc:1ea756ece83e78091c08e32e6b59487d +INFO:root:PassingDataObject: nmdc:21e189b2778a402c8be7489770adcfa7 +INFO:root:PassingDataObject: nmdc:4ccdc5ba02e529e667d15fa9d6b3df06 +INFO:root:PassingDataObject: nmdc:674e951e4fb5f388bedffd9f7e5f7f5f +INFO:root:PassingDataObject: nmdc:bcefb2c414dfd51e734d348a15a45725 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:38a36020de5449d0b6631dbf0f5c4143, Assembly Activity for nmdc:mga0pq6y95 +INFO:root:PassingDataObject: nmdc:856d49e0ca0b1e322d89482378d10c26 +INFO:root:PassingDataObject: nmdc:b02ba460f76e9252161000291272c2bf +INFO:root:PassingDataObject: nmdc:e2b028fcabe64e9a0d8cf0d59e5df527 +INFO:root:PassingDataObject: nmdc:4a585bcd6b348f4c463c32863abf07b2 +INFO:root:PassingDataObject: nmdc:7b56dd13db8c0a8f16ac536f880fac0b +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:bc2f8885b7a9398b2e145f6177f140e2, Assembly Activity for nmdc:mga0p9g717 +INFO:root:PassingDataObject: nmdc:78dc120f1963f7e3627c7ca25e480343 +INFO:root:PassingDataObject: nmdc:906f21103f30fbaf46bb5dfee104e8ea +INFO:root:PassingDataObject: nmdc:8e375e1a938bd62fad9198c7b505397f +INFO:root:PassingDataObject: nmdc:c21cd9a29020a044e9c5ec4c17307000 +INFO:root:PassingDataObject: nmdc:872afb7e4e6b708fe6cfb87647e1fe97 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452671 +INFO:root:found 4 records +INFO:root:record: nmdc:0260377e388537586dd4bc999b7d2430, Annotation Activity for nmdc:mga0f5q703 +INFO:root:PassingDataObject: nmdc:983c6caa20a0eda54c5c9cd82cfe908f +INFO:root:PassingDataObject: nmdc:0f32c96031cfd6f2009b69261eeb72ac +INFO:root:PassingDataObject: nmdc:959e61a84f6d34fb11b1ca2cc330ecc7 +INFO:root:PassingDataObject: nmdc:b5cb2f907cd3d1d015dc9e139d7b97b1 +INFO:root:PassingDataObject: nmdc:820a34bf96ccfd6a5ab2930b315ae446 +INFO:root:PassingDataObject: nmdc:1ddd09e163130c79d3eb76b2da944077 +INFO:root:PassingDataObject: nmdc:3121a7d8c0ecba108cdf09b8a7f5a3d5 +INFO:root:PassingDataObject: nmdc:35d0b48e3d4b833cf811a194cff47ecd +INFO:root:PassingDataObject: nmdc:ce0c1142d9cf1cb511c7d64e3e2f41e5 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:0260377e388537586dd4bc999b7d2430 +ERROR:root:FailedDataObject: nmdc:e24573da8d559605a66e008438576d54, +ERROR:root:FailedDataObject: nmdc:614261a0a815055631efd5279fc69f05, +ERROR:root:failing_data_objects: 11 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0260377e388537586dd4bc999b7d2430, Annotation Activity for nmdc:mga0f5q703 +INFO:root:record: nmdc:de944aa427548d7d8853f486b48a22de, Annotation Activity for nmdc:mga0n78494 +INFO:root:PassingDataObject: nmdc:fa2504dbedde5685a53693b745153b0b +INFO:root:PassingDataObject: nmdc:0c2266fbe8c96cb51da971d4b43ece4a +INFO:root:PassingDataObject: nmdc:ecbe061002ab322a80ce649e4e45f6fd +INFO:root:PassingDataObject: nmdc:c7434c05b8cb3e20313d3dae01851f11 +INFO:root:PassingDataObject: nmdc:cb85841d3c4e12a8619819ab24fe4db9 +INFO:root:PassingDataObject: nmdc:d245235bb8264bfe31831b781cc0f489 +INFO:root:PassingDataObject: nmdc:31951e7d11ffb2f7f9b7ab69861c1f77 +INFO:root:PassingDataObject: nmdc:b3d955a6589023733549973a5ebc852c +INFO:root:PassingDataObject: nmdc:0c95299f776886867a8925c377c781c6 +INFO:root:PassingDataObject: nmdc:0ab385c3bcbc0f369b0e547707bdbb78 +INFO:root:PassingDataObject: nmdc:8579cd4d8d23ceaf39315d9c17fe3ee0 +INFO:root:PassingDataObject: nmdc:d56c54af3d5b95efa205f97c598afb9b +INFO:root:PassingDataObject: nmdc:df8769ef588fabc8029a0eabedc9de2d +INFO:root:PassingDataObject: nmdc:a0ec960959eeefd511926e944e8f63c2 +INFO:root:PassingDataObject: nmdc:7f1e432f98846a4145e36be40f84ecbc +INFO:root:PassingDataObject: nmdc:c596ac713a71bd2060b366900df2f3da +INFO:root:PassingDataObject: nmdc:00417fe24303a44cf08b4c4a46af6273 +INFO:root:PassingDataObject: nmdc:3661aea9fedf6b334cb593c03c12ec62 +INFO:root:PassingDataObject: nmdc:1793774791ab6e36f84b4aa563f98ea4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:de944aa427548d7d8853f486b48a22de +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:de944aa427548d7d8853f486b48a22de, Annotation Activity for nmdc:mga0n78494 +INFO:root:record: nmdc:bc2f8885b7a9398b2e145f6177f140e2, Annotation Activity for nmdc:mga0p9g717 +INFO:root:PassingDataObject: nmdc:dcfe7568c45a2d886b50d41e6cc4cad6 +INFO:root:PassingDataObject: nmdc:2f11ea75388ff6f81dc78d0e75358468 +INFO:root:PassingDataObject: nmdc:8650e9b219259adef0115e5e7d392502 +INFO:root:PassingDataObject: nmdc:e8167a60786ba1416454625c9d57aa03 +INFO:root:PassingDataObject: nmdc:38a34d67b9896eda06eaa2fce5f2b945 +INFO:root:PassingDataObject: nmdc:dba5a090860ea6d45c58ae614afa3ac0 +INFO:root:PassingDataObject: nmdc:7fa236e80cbcdf86532ea7615f6c2522 +INFO:root:PassingDataObject: nmdc:f5f4821c29f92305baf4fc65d20b7311 +INFO:root:PassingDataObject: nmdc:b75131afb8877cf1bbfa6357f4bae0f4 +INFO:root:PassingDataObject: nmdc:75010a39ecef894e803d7a2349b7a955 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:bc2f8885b7a9398b2e145f6177f140e2 +ERROR:root:FailedDataObject: nmdc:0ace112db9e051a089c82d866119e4e6, +ERROR:root:failing_data_objects: 11 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bc2f8885b7a9398b2e145f6177f140e2, Annotation Activity for nmdc:mga0p9g717 +INFO:root:record: nmdc:38a36020de5449d0b6631dbf0f5c4143, Annotation Activity for nmdc:mga0pq6y95 +INFO:root:PassingDataObject: nmdc:8006f9072b64666df126aacec7a8ff9b +INFO:root:PassingDataObject: nmdc:b012a6b7e4ff6864ac5a391458dbb9af +INFO:root:PassingDataObject: nmdc:a0ecfe36b60e75146136d40daa7aa2d8 +INFO:root:PassingDataObject: nmdc:577bcb210ff4122321713c7350670d5b +INFO:root:PassingDataObject: nmdc:2a7b5f70fb8016409717119fe5572294 +INFO:root:PassingDataObject: nmdc:7ada5ae88be9a9907efd07d8bca8af8d +INFO:root:PassingDataObject: nmdc:6f6de2b7e1d91edeae61e0a94b243bc0 +INFO:root:PassingDataObject: nmdc:dcf6e2127d968ed25b4b0d19ee2b340b +INFO:root:PassingDataObject: nmdc:2ec8287a476dc06b5cde5649c2a1521e +INFO:root:PassingDataObject: nmdc:b45086e528bbac2739cfcd3949aff727 +INFO:root:PassingDataObject: nmdc:9c03a3093ecb69ad9b936b4c13ea15eb +INFO:root:PassingDataObject: nmdc:34f52ae818039b7d9e9e022d332acc99 +INFO:root:PassingDataObject: nmdc:2fe5d58c2e4c723d1f3cf35b2c55b4d8 +INFO:root:PassingDataObject: nmdc:5a5429f2c05a73b50533d947dee3dac0 +INFO:root:PassingDataObject: nmdc:1eb6b1221354568f50a0d1147daa5336 +INFO:root:PassingDataObject: nmdc:813ab7d463c7a0c0da802d2c01a487b1 +INFO:root:PassingDataObject: nmdc:40ded68ed106a9a8da4f973914259e11 +INFO:root:PassingDataObject: nmdc:7cb5af725a57682247e6dc1376775d91 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:38a36020de5449d0b6631dbf0f5c4143 +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:38a36020de5449d0b6631dbf0f5c4143, Annotation Activity for nmdc:mga0pq6y95 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 4 +INFO:root:set_name: mags_activity_set for gold:Gp0452671 +INFO:root:found 4 records +INFO:root:record: nmdc:de944aa427548d7d8853f486b48a22de, MAGs Analysis Activity for nmdc:mga0n78494 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:de944aa427548d7d8853f486b48a22de +ERROR:root:FailedDataObject: nmdc:9280a8263435093dbffa19063dfa319b, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:de944aa427548d7d8853f486b48a22de, MAGs Analysis Activity for nmdc:mga0n78494 +INFO:root:record: nmdc:0260377e388537586dd4bc999b7d2430, MAGs Analysis Activity for nmdc:mga0f5q703 +INFO:root:PassingDataObject: nmdc:1998841e31b97ee28e9961240600cdbd +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0260377e388537586dd4bc999b7d2430 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0260377e388537586dd4bc999b7d2430, MAGs Analysis Activity for nmdc:mga0f5q703 +INFO:root:record: nmdc:38a36020de5449d0b6631dbf0f5c4143, MAGs Analysis Activity for nmdc:mga0pq6y95 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:38a36020de5449d0b6631dbf0f5c4143 +ERROR:root:FailedDataObject: nmdc:bd7d97aa530acdada01af41c523e97ec, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:38a36020de5449d0b6631dbf0f5c4143, MAGs Analysis Activity for nmdc:mga0pq6y95 +INFO:root:record: nmdc:bc2f8885b7a9398b2e145f6177f140e2, MAGs Analysis Activity for nmdc:mga0p9g717 +INFO:root:PassingDataObject: nmdc:b4e2faa762de0ddd22daef70f35c37cb +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:bc2f8885b7a9398b2e145f6177f140e2 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bc2f8885b7a9398b2e145f6177f140e2, MAGs Analysis Activity for nmdc:mga0p9g717 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452671 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-7kr2jb76 +INFO:root:legacy_id: gold:Gp0452669 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-7kr2jb76 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4ef9ff76494f8257365032a769c4108b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:463c76b52b42c95d84846b73f2e23a05 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452669 +INFO:root:found 2 records +INFO:root:record: nmdc:567a1018c867c08fd62fdfa89ad5e8c7, Read QC Activity for nmdc:mga0herq61 +INFO:root:PassingDataObject: nmdc:165e606741698f3b4eed934cb4e3f23a +INFO:root:PassingDataObject: nmdc:89173500fd64bc39898c4002cf245870 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:f84f677c42e2357df65b519d9e8fc9f9, Read QC Activity for nmdc:mga0709194 +INFO:root:PassingDataObject: nmdc:68b7bfe492167cb71ce84144d5bd9141 +INFO:root:PassingDataObject: nmdc:05e30ba5145df54d55e5abf38a9c0866 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452669 +INFO:root:found 2 records +INFO:root:record: nmdc:567a1018c867c08fd62fdfa89ad5e8c7, ReadBased Analysis Activity for nmdc:mga0herq61 +INFO:root:PassingDataObject: nmdc:5adb71e7ae1da9830f3aa1348f55aa9f +INFO:root:PassingDataObject: nmdc:1ddea733605188c33167856f5d119223 +INFO:root:PassingDataObject: nmdc:fa639b406f019eae0ed405d98a1ff787 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:567a1018c867c08fd62fdfa89ad5e8c7 +ERROR:root:FailedDataObject: nmdc:b57a160af0059b5c9f2c886246ba1e80, +ERROR:root:FailedDataObject: nmdc:98841802c822e2095911b6db20da8b10, +ERROR:root:FailedDataObject: nmdc:b7da3e85e56e73c73fa5685bdb207026, +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:567a1018c867c08fd62fdfa89ad5e8c7 +ERROR:root:FailedDataObject: nmdc:c7b16eb39f3fec0b1c1506719d0e1cc7, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:567a1018c867c08fd62fdfa89ad5e8c7, ReadBased Analysis Activity for nmdc:mga0herq61 +INFO:root:record: nmdc:f84f677c42e2357df65b519d9e8fc9f9, ReadBased Analysis Activity for nmdc:mga0709194 +INFO:root:PassingDataObject: nmdc:d85a5b3b04309758c92d4a52866fdfa7 +INFO:root:PassingDataObject: nmdc:3769841ee409bec66527f1832c08c205 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:f84f677c42e2357df65b519d9e8fc9f9 +ERROR:root:FailedDataObject: nmdc:da768993e1414fbb0b7656e09685850a, +ERROR:root:FailedDataObject: nmdc:cd01c08e4c5efa4fec3d541c682b3779, +ERROR:root:FailedDataObject: nmdc:afb08221e570ffc50a8609eae3e78ec0, +ERROR:root:FailedDataObject: nmdc:8b2bcfb9b7a839162210bda0b973786b, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:f84f677c42e2357df65b519d9e8fc9f9 +ERROR:root:FailedDataObject: nmdc:632319e53214066c6ef6d130e4858d8f, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f84f677c42e2357df65b519d9e8fc9f9, ReadBased Analysis Activity for nmdc:mga0709194 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452669 +INFO:root:found 2 records +INFO:root:record: nmdc:567a1018c867c08fd62fdfa89ad5e8c7, Assembly Activity for nmdc:mga0herq61 +INFO:root:PassingDataObject: nmdc:151c528e5f70d6c5b711b6b98be1da84 +INFO:root:PassingDataObject: nmdc:7132570c2fae5b65fdb354e835ad5c8f +INFO:root:PassingDataObject: nmdc:4997612b6c01bb6cca6cf31dcb864995 +INFO:root:PassingDataObject: nmdc:3b2512b99758380b58a29bcc77433946 +INFO:root:PassingDataObject: nmdc:b5c947e1de69696b10e14d6fdb9d7034 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:f84f677c42e2357df65b519d9e8fc9f9, Assembly Activity for nmdc:mga0709194 +INFO:root:PassingDataObject: nmdc:88152435beef17669a6d68bd4ecbd3fa +INFO:root:PassingDataObject: nmdc:8014286f0d2b635313135261ccdaa830 +INFO:root:PassingDataObject: nmdc:1127c8867e3c0338cf452217102b2cdd +INFO:root:PassingDataObject: nmdc:452e3ec713f8595993514c49a8902ab9 +INFO:root:PassingDataObject: nmdc:cb7ac93a87993d03ca952e954d93b374 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452669 +INFO:root:found 2 records +INFO:root:record: nmdc:567a1018c867c08fd62fdfa89ad5e8c7, Annotation Activity for nmdc:mga0herq61 +INFO:root:PassingDataObject: nmdc:5cbb24c1bb47c63168b17bb384674cfe +INFO:root:PassingDataObject: nmdc:3b6ad98784e8ca6ab5e570abf3bd8eae +INFO:root:PassingDataObject: nmdc:af29125186b9f5cf5726973a4fdf02f8 +INFO:root:PassingDataObject: nmdc:c22577ad0e52d828c9fa9d50270b8520 +INFO:root:PassingDataObject: nmdc:6aa6c85b4927543a3fc61c4acfa98bb3 +INFO:root:PassingDataObject: nmdc:eb9ac276560e7976fa5631efb0d765e4 +INFO:root:PassingDataObject: nmdc:2f706cc3e0dc936cc3db69fe32349f31 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:567a1018c867c08fd62fdfa89ad5e8c7 +ERROR:root:FailedDataObject: nmdc:4d25698993c0cddc39eb196c4e8fdd28, +ERROR:root:FailedDataObject: nmdc:e51e6c7b46f940a5f152b92184b1bfd7, +ERROR:root:FailedDataObject: nmdc:68d71abf827872deae7151f4fd2aa247, +ERROR:root:FailedDataObject: nmdc:d090b5493378560e50ee6b4e9e6f0566, +ERROR:root:FailedDataObject: nmdc:c850eb037eb286b27eab1ec8f144f7c3, +ERROR:root:FailedDataObject: nmdc:493a70a7d179ff974a9f65f93f34754d, +ERROR:root:FailedDataObject: nmdc:b8982c259309a57455f52738b05c71e5, +ERROR:root:FailedDataObject: nmdc:4637fc8da5754e81e4d7a5e3a661feab, +ERROR:root:FailedDataObject: nmdc:a5a72bca928dcfc2f7c723b0b4515ea0, +ERROR:root:FailedDataObject: nmdc:7d17ec363aebd414a8722a4bd8d4e4d4, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:567a1018c867c08fd62fdfa89ad5e8c7, Annotation Activity for nmdc:mga0herq61 +INFO:root:record: nmdc:f84f677c42e2357df65b519d9e8fc9f9, Annotation Activity for nmdc:mga0709194 +INFO:root:PassingDataObject: nmdc:2b671526514aee2dc032d006aa2aa4b9 +INFO:root:PassingDataObject: nmdc:a737c8c0f99d5ab0b5dc90d2f2b9adde +INFO:root:PassingDataObject: nmdc:cb2a150413aa795dbe111acf0cf27432 +INFO:root:PassingDataObject: nmdc:936a0d2203d3b1b05bc961d87ae2fd88 +INFO:root:PassingDataObject: nmdc:f3d60af84070238ac1399df8cdf9f241 +INFO:root:PassingDataObject: nmdc:6d5181cf8569da05c2b02db5b7862cc1 +INFO:root:PassingDataObject: nmdc:d45ff8f2cde1822ee5867858d4465e6f +INFO:root:PassingDataObject: nmdc:1cefb16cad9f951eba99ca2c7354293c +INFO:root:PassingDataObject: nmdc:64c730e4f0dfe9a9fbf538f07b5ed52b +INFO:root:PassingDataObject: nmdc:b28870f02ba79dac14a54473d981ed95 +INFO:root:PassingDataObject: nmdc:480d87d8fb7fc2a0342f32c68bec2cd9 +INFO:root:PassingDataObject: nmdc:5fbbd348ff3d56c74d954c050e69b53b +INFO:root:PassingDataObject: nmdc:80ce53034498fcf07826e29d066e4ab0 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:f84f677c42e2357df65b519d9e8fc9f9 +ERROR:root:FailedDataObject: nmdc:a79566421eef1d637b532f76ea0a32a1, +ERROR:root:failing_data_objects: 14 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f84f677c42e2357df65b519d9e8fc9f9, Annotation Activity for nmdc:mga0709194 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452669 +INFO:root:found 2 records +INFO:root:record: nmdc:567a1018c867c08fd62fdfa89ad5e8c7, MAGs Analysis Activity for nmdc:mga0herq61 +INFO:root:PassingDataObject: nmdc:81b950f7d3df977ca5a0a09769470b5b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:567a1018c867c08fd62fdfa89ad5e8c7 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:567a1018c867c08fd62fdfa89ad5e8c7, MAGs Analysis Activity for nmdc:mga0herq61 +INFO:root:record: nmdc:f84f677c42e2357df65b519d9e8fc9f9, MAGs Analysis Activity for nmdc:mga0709194 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:f84f677c42e2357df65b519d9e8fc9f9 +ERROR:root:FailedDataObject: nmdc:528fa87b5a01ba8d09e7455da2066596, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f84f677c42e2357df65b519d9e8fc9f9, MAGs Analysis Activity for nmdc:mga0709194 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452669 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-9nac0407 +INFO:root:legacy_id: gold:Gp0452713 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9nac0407 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:c95fc9b351e1d50e9e4938837d84197b +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:cd4ab91598148e9f646b63a87f6eedad +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452713 +INFO:root:found 2 records +INFO:root:record: nmdc:d83ebbdf8862678b161248d6e09f42bb, Read QC Activity for nmdc:mga03q3514 +INFO:root:PassingDataObject: nmdc:d1fecff62275df478621248b4f922ac0 +INFO:root:PassingDataObject: nmdc:09812576c0ba9ba13b04850c8eec06e9 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:c3ec08c43ab96393dfd930bb85c96ad1, Read QC Activity for nmdc:mga0b5aq17 +INFO:root:PassingDataObject: nmdc:d940c7ee3a3a1420f8b155c257b45a96 +INFO:root:PassingDataObject: nmdc:9f98c397015ebe8aa24451e645ad7220 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452713 +INFO:root:found 2 records +INFO:root:record: nmdc:d83ebbdf8862678b161248d6e09f42bb, ReadBased Analysis Activity for nmdc:mga03q3514 +INFO:root:PassingDataObject: nmdc:2b617083b6ac6daf5f3def6113dcbd3a +INFO:root:PassingDataObject: nmdc:0a6138d30fd444652acc9839591cae96 +INFO:root:PassingDataObject: nmdc:cb7f4d486999692b6f9f429b9a1bbdc7 +INFO:root:PassingDataObject: nmdc:d19c1fe2a816665b9460f60c8fc6192f +INFO:root:PassingDataObject: nmdc:58c67eee51d86b08c6a8ce869515c255 +INFO:root:PassingDataObject: nmdc:d5b8889ecb1eab034fb3efe812ccddc7 +INFO:root:PassingDataObject: nmdc:b3634d54364df7664e980dfa25b7efb1 +INFO:root:PassingDataObject: nmdc:40ef4bff468e07366b6956f06d95fca6 +INFO:root:PassingDataObject: nmdc:721f1d0d53a8a53621c41496831fe5af +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:c3ec08c43ab96393dfd930bb85c96ad1, ReadBased Analysis Activity for nmdc:mga0b5aq17 +INFO:root:PassingDataObject: nmdc:48f88040bb3bfd282da98f6217df6dad +INFO:root:PassingDataObject: nmdc:7f25c0382d4227f1b358b19360bc7f4f +INFO:root:PassingDataObject: nmdc:a6b8c0005c2c908a2dd0f590598565d9 +INFO:root:PassingDataObject: nmdc:36df84e0f49533a7ce9dfa088db8f767 +INFO:root:PassingDataObject: nmdc:17269d83184ce34b82ea36e6b8eca95a +INFO:root:PassingDataObject: nmdc:0184c2ca7fd39aeff6788e43b453f6d6 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:c3ec08c43ab96393dfd930bb85c96ad1 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:c3ec08c43ab96393dfd930bb85c96ad1 +ERROR:root:FailedDataObject: nmdc:da474570a978ada593dffaa2ab98d11a, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c3ec08c43ab96393dfd930bb85c96ad1, ReadBased Analysis Activity for nmdc:mga0b5aq17 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452713 +INFO:root:found 2 records +INFO:root:record: nmdc:c3ec08c43ab96393dfd930bb85c96ad1, Assembly Activity for nmdc:mga0b5aq17 +INFO:root:PassingDataObject: nmdc:3389219fa7f5704b665f2886a02e499b +INFO:root:PassingDataObject: nmdc:ffa89a17ccc693c3ba2ea690c72d0cb2 +INFO:root:PassingDataObject: nmdc:4ab1c95858a35d836094c3d65240e8dd +INFO:root:PassingDataObject: nmdc:678a50557d44d602be4ddc6ca5600c33 +INFO:root:PassingDataObject: nmdc:d3c43f9b9f63226a1282ad5be7f4805b +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:d83ebbdf8862678b161248d6e09f42bb, Assembly Activity for nmdc:mga03q3514 +INFO:root:PassingDataObject: nmdc:ebed2a8c8163dc0919454297b9c3b970 +INFO:root:PassingDataObject: nmdc:ab8cb284f94c37c783cb00638a6d6bd0 +INFO:root:PassingDataObject: nmdc:79b45bcbed9a920e8bd840c204ca8492 +INFO:root:PassingDataObject: nmdc:947e919f45247175ee9d1ee8135fa15a +INFO:root:PassingDataObject: nmdc:c36aacef7affe7d5670033c9473ed930 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452713 +INFO:root:found 2 records +INFO:root:record: nmdc:d83ebbdf8862678b161248d6e09f42bb, Annotation Activity for nmdc:mga03q3514 +INFO:root:PassingDataObject: nmdc:0c0cfd9a4cfbe11b3808eae00237b8a1 +INFO:root:PassingDataObject: nmdc:086c4313ea57c7118757d515b57cf019 +INFO:root:PassingDataObject: nmdc:04ca420dd330edbae1abb484b3b30359 +INFO:root:PassingDataObject: nmdc:f440249c982c4904a586ebb5c2497184 +INFO:root:PassingDataObject: nmdc:a93508f5210b9ddbac37b9297ffadfcf +INFO:root:PassingDataObject: nmdc:6c44536895f1a576852e8d18aa369e43 +INFO:root:PassingDataObject: nmdc:3c5ac7dfef19191caca525b05f08502c +INFO:root:PassingDataObject: nmdc:ef3ba7094d70db2aeb0e16dc790c3828 +INFO:root:PassingDataObject: nmdc:6fff984ff573c08f53e6ca91d8ffa916 +INFO:root:PassingDataObject: nmdc:14f7beb64943e5e5749583099342392b +INFO:root:PassingDataObject: nmdc:bf1f41ed417429774242404b95367a03 +INFO:root:PassingDataObject: nmdc:38948bce8c9d719de2cb826761e0c0ed +INFO:root:PassingDataObject: nmdc:182aa02914249ccaab0f58763e523a7f +INFO:root:PassingDataObject: nmdc:431fd70827c9997f222eb486e4c52e61 +INFO:root:PassingDataObject: nmdc:21d996fa1f10d2a4f991a1a72543d80e +INFO:root:PassingDataObject: nmdc:2a85d4389863ac5e3365e2af62b9ca88 +INFO:root:PassingDataObject: nmdc:be717ae85fa19d6f5726da4bbe9a7098 +INFO:root:PassingDataObject: nmdc:3381c3617f10c2db337c667bb61a6e1a +INFO:root:PassingDataObject: nmdc:6aac5e927e739a1a65758091fed63297 +INFO:root:PassingDataObject: nmdc:a883a0550cd212369691183333a910d4 +INFO:root:PassingDataObject: nmdc:31f95d8dcabd3459bfbc434da5d19c66 +INFO:root:PassingDataObject: nmdc:4fba8955097747144586fee650cd718f +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:c3ec08c43ab96393dfd930bb85c96ad1, Annotation Activity for nmdc:mga0b5aq17 +INFO:root:PassingDataObject: nmdc:dad997390f4e0aa93be90af03bbfd315 +INFO:root:PassingDataObject: nmdc:15d5775a766e251997b34d81b2a55c67 +INFO:root:PassingDataObject: nmdc:6dba00a4bb15b7e9a9d370cacfe37b16 +INFO:root:PassingDataObject: nmdc:8762443e66b260086421e4d9360dca5c +INFO:root:PassingDataObject: nmdc:5cc1e41415f80ad88ccec5734392f5f1 +INFO:root:PassingDataObject: nmdc:c79503edba300a6aded68332a65567a1 +INFO:root:PassingDataObject: nmdc:2b675886ae11a289480273405639451f +INFO:root:PassingDataObject: nmdc:4a3b03313cb7bbd1cf8a27c4e5b9e0a2 +INFO:root:PassingDataObject: nmdc:44e1421c8c9600d15c790a7ed18be7a7 +INFO:root:PassingDataObject: nmdc:bd8b0115c1bb40c1d09bfde829b3152f +INFO:root:PassingDataObject: nmdc:708b917f7c8389daa11e3bbcac21b61b +INFO:root:PassingDataObject: nmdc:bd96fc10d0ec84a9d211f569cc8ea048 +INFO:root:PassingDataObject: nmdc:e65779358a7d80b6db4d6071c4074e80 +INFO:root:PassingDataObject: nmdc:39f29bb4e48cbc1a77474e9a3da492e2 +INFO:root:PassingDataObject: nmdc:19cea324bc9806b88bd20a88e4a794e2 +INFO:root:PassingDataObject: nmdc:bce5e655001a6fe7f14fbe4065e19a6a +INFO:root:PassingDataObject: nmdc:5112879d89745f6a4a8cf7e8dcd88f41 +INFO:root:PassingDataObject: nmdc:9e3c6c5275e69d8aaf17e134039162ca +INFO:root:PassingDataObject: nmdc:ded75f61149b704265830511c404854c +INFO:root:PassingDataObject: nmdc:8228307c8fc957f88bd177917e1b05c3 +INFO:root:PassingDataObject: nmdc:2bc06173eab7742b1994341cf6fe0f77 +INFO:root:PassingDataObject: nmdc:41626e84f328dd96c382c932bc5e32eb +INFO:root:passing_data_objects: 22 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452713 +INFO:root:found 2 records +INFO:root:record: nmdc:d83ebbdf8862678b161248d6e09f42bb, MAGs Analysis Activity for nmdc:mga03q3514 +INFO:root:PassingDataObject: nmdc:c2953bfd2432a19cfe564e2a47ce459b +INFO:root:PassingDataObject: nmdc:f282125e65d23fd98ebf889827429ae3 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:c3ec08c43ab96393dfd930bb85c96ad1, MAGs Analysis Activity for nmdc:mga0b5aq17 +INFO:root:PassingDataObject: nmdc:6ab0337c673484cfc8c25924eba55abd +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:c3ec08c43ab96393dfd930bb85c96ad1 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c3ec08c43ab96393dfd930bb85c96ad1, MAGs Analysis Activity for nmdc:mga0b5aq17 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452713 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-0dz0wj57 +INFO:root:legacy_id: gold:Gp0452679 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-0dz0wj57 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:14e40127016da0ad47630a7092b9809f +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:9c0c26f6d20b386e63b2b87af20dec27 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:4f6df0b7a2e9f4de37bf224b41bfc854 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452679 +INFO:root:found 3 records +INFO:root:record: nmdc:cd53d94cd24a985ad8b65ba22b946f85, Read QC Activity for nmdc:mga044re36 +INFO:root:PassingDataObject: nmdc:2945166ff29153b24014d22dc2cc5c02 +INFO:root:PassingDataObject: nmdc:8a40acb6c7daf6318213d20824ec751b +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee, Read QC Activity for nmdc:mga0hvd050 +INFO:root:PassingDataObject: nmdc:f39963c8efedb0bc97db97110daf0b1a +INFO:root:PassingDataObject: nmdc:a5452473ed81feb515cfd5ec704b699a +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:2feeb1b123648e8f5393d943b723e78e, Read QC Activity for nmdc:mga0fsjy84 +INFO:root:PassingDataObject: nmdc:42fab0117c0ff4a7831ef82bb002645e +INFO:root:PassingDataObject: nmdc:442945e6df29a49b2f5d6b40933e79b5 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452679 +INFO:root:found 3 records +INFO:root:record: nmdc:cd53d94cd24a985ad8b65ba22b946f85, ReadBased Analysis Activity for nmdc:mga044re36 +INFO:root:PassingDataObject: nmdc:201a2db9502166ceb60edfc59263ab8b +INFO:root:PassingDataObject: nmdc:29ca9371f7c3d25acc7d9683dfac8fd4 +INFO:root:PassingDataObject: nmdc:6f0b33529b472a253a024182152fae55 +INFO:root:PassingDataObject: nmdc:4a68cac075da37778bb702cbc8ed5360 +INFO:root:PassingDataObject: nmdc:bb945c10625bdbb03811db8b713743fd +INFO:root:PassingDataObject: nmdc:c2b849d977b832723f7a61d0bdc04ddc +INFO:root:PassingDataObject: nmdc:cd765527732b01c9a54c02c2f4b0aeec +INFO:root:PassingDataObject: nmdc:9c5cc2e2eaa0f555fdf1a33423764c26 +INFO:root:PassingDataObject: nmdc:4d6af93325192bc36eb83f34d9f3cc09 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee, ReadBased Analysis Activity for nmdc:mga0hvd050 +INFO:root:PassingDataObject: nmdc:25bb90615ae06c984e056e1ed385fa62 +INFO:root:PassingDataObject: nmdc:5cc382643c1758f88fe6695173c3430e +INFO:root:PassingDataObject: nmdc:b011b494ba9ed274dd25514f740b10ca +INFO:root:PassingDataObject: nmdc:a4a6f411642b47eae3d96f91421c8c8e +INFO:root:PassingDataObject: nmdc:4c3e5a06b8954b6595c4760dbe45ac62 +INFO:root:PassingDataObject: nmdc:14aa790457029fc61ade6b5f5a548c96 +INFO:root:PassingDataObject: nmdc:fde0776096f3d22e1574b84f94e19bc6 +INFO:root:PassingDataObject: nmdc:213bef2bd82092b7e60ca18a5d1af87a +INFO:root:PassingDataObject: nmdc:8d39b38863b466f0ace948c0f8920079 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:2feeb1b123648e8f5393d943b723e78e, ReadBased Analysis Activity for nmdc:mga0fsjy84 +INFO:root:PassingDataObject: nmdc:87e096f84a58bc4b8905fb595aa69ef2 +INFO:root:PassingDataObject: nmdc:9849faf8adbe7826c91193a683f785b7 +INFO:root:PassingDataObject: nmdc:666da95db8f2ccea3e82b20728766db0 +INFO:root:PassingDataObject: nmdc:53b93e561324d6df84970e3d04ee6481 +INFO:root:PassingDataObject: nmdc:1ed1f433440b4c79252d05559b99086b +INFO:root:PassingDataObject: nmdc:56ffe736ff9827753f90243b3c10e792 +INFO:root:PassingDataObject: nmdc:49483c1542a15742a84f20fb1bb14c31 +INFO:root:PassingDataObject: nmdc:ca5a7e7d03fac2281558643a9cbbe290 +INFO:root:PassingDataObject: nmdc:9b15c2ad5c37edf5fb8a01d0a15e7dab +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452679 +INFO:root:found 3 records +INFO:root:record: nmdc:cd53d94cd24a985ad8b65ba22b946f85, Assembly Activity for nmdc:mga044re36 +INFO:root:PassingDataObject: nmdc:7fa2e21379c41e731bbfafa5487f3cac +INFO:root:PassingDataObject: nmdc:86744f4a136d280c9eb71ce0fe87f1e5 +INFO:root:PassingDataObject: nmdc:4ee23015dfb33e1dd7de32a9f85fee2d +INFO:root:PassingDataObject: nmdc:f40620b4a51a2d0e53196118ebfb149e +INFO:root:PassingDataObject: nmdc:98abf291b4d026aa6ce9423621cf3a1a +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee, Assembly Activity for nmdc:mga0hvd050 +INFO:root:PassingDataObject: nmdc:3bcd8bce3c773dd600d349f8a4f22538 +INFO:root:PassingDataObject: nmdc:65a1fff47dd156e81f92891d8f4e6888 +INFO:root:PassingDataObject: nmdc:e507d7d108857de249ceaa6705806bc7 +INFO:root:PassingDataObject: nmdc:446aafd633d64ef6b446534cbb5e55d7 +INFO:root:PassingDataObject: nmdc:bcf6e948e0bef9d96cc52a8e5504a693 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:2feeb1b123648e8f5393d943b723e78e, Assembly Activity for nmdc:mga0fsjy84 +INFO:root:PassingDataObject: nmdc:6a8f17202db29edb62c80734824a87d7 +INFO:root:PassingDataObject: nmdc:bf4a3dfcaabf0e65367558c0f5d2819b +INFO:root:PassingDataObject: nmdc:6c0a512854d38a58277c43e37689f256 +INFO:root:PassingDataObject: nmdc:1c9c24f0965ec6d8687c209cab888ccd +INFO:root:PassingDataObject: nmdc:9e6512b44876acb5c086bb11cd6952bd +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452679 +INFO:root:found 3 records +INFO:root:record: nmdc:cd53d94cd24a985ad8b65ba22b946f85, Annotation Activity for nmdc:mga044re36 +INFO:root:PassingDataObject: nmdc:cf8e4c8651c862359b22792d3cde634f +INFO:root:PassingDataObject: nmdc:c4f638cd4f696511884cadd75e968cf2 +INFO:root:PassingDataObject: nmdc:d6be329ae3472e2ba31afeeadea64749 +INFO:root:PassingDataObject: nmdc:90e1f462b1485c9bd609257a54d9ab45 +INFO:root:PassingDataObject: nmdc:756ee7196975c831226908bb71f23155 +INFO:root:PassingDataObject: nmdc:4a89bca3a024529e7b4209e3f805fcb5 +INFO:root:PassingDataObject: nmdc:d01ae4fc9b73aa39beb86396d0933408 +INFO:root:PassingDataObject: nmdc:09acdac444223940f0052c3b88e96e4f +INFO:root:PassingDataObject: nmdc:f05ae58edd2b45aa9eb5e45273ac8659 +INFO:root:PassingDataObject: nmdc:a539142ac10b2928fb031ec6c3ae6d55 +INFO:root:PassingDataObject: nmdc:d838a8643d587b20725294b28dc0a210 +INFO:root:PassingDataObject: nmdc:78ef0779319f162edf7316cbe9b45382 +INFO:root:PassingDataObject: nmdc:cc55be75ba503d8aa3404a7761341671 +INFO:root:PassingDataObject: nmdc:9545f6b2a4c940f63fae6b347405a63e +INFO:root:PassingDataObject: nmdc:e02f4471fc30b66fcd08e09c0452fffe +INFO:root:PassingDataObject: nmdc:4af040e3345404ae3b72370134fe35af +INFO:root:PassingDataObject: nmdc:5d3d706636b51a622dba69f78ef4af7f +INFO:root:PassingDataObject: nmdc:7a0f7baef053725bb89cbb0225685312 +INFO:root:PassingDataObject: nmdc:bf2795aee49792365c243d167de20d81 +INFO:root:PassingDataObject: nmdc:45a45a93b25dda91541c1ea67fd4ef53 +INFO:root:PassingDataObject: nmdc:cf77ae9599c292541a3f217d875e388f +INFO:root:PassingDataObject: nmdc:7ea8318009bddea089d787d7b3a9f592 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee, Annotation Activity for nmdc:mga0hvd050 +INFO:root:PassingDataObject: nmdc:aa569d5b96c11fabd545d6131f959cfd +INFO:root:PassingDataObject: nmdc:03b1ed7754432197d4d222ad7e7092a9 +INFO:root:PassingDataObject: nmdc:7a099e76eda9a02231d674f8057d724a +INFO:root:PassingDataObject: nmdc:b09cb70903feb866938aa846f7aec280 +INFO:root:PassingDataObject: nmdc:4a90bb6963e800390ddfba6d521c2508 +INFO:root:PassingDataObject: nmdc:b105448bf7b4b82d8efcaf6211b4eb64 +INFO:root:PassingDataObject: nmdc:9ae8e9db5ff4c51ed6fa81b7cf347ce7 +INFO:root:PassingDataObject: nmdc:cf1aad4679dedf4e6bb126c5330c7f88 +INFO:root:PassingDataObject: nmdc:aba64dee9bd7af51992a1641db2fa860 +INFO:root:PassingDataObject: nmdc:be1ce8dc81697cfd8f5d4dd1c5b27835 +INFO:root:PassingDataObject: nmdc:50bde5344140e4282d052efe9ae59932 +INFO:root:PassingDataObject: nmdc:e5106a8d631965e80ab0de3a5c3ab7a8 +INFO:root:PassingDataObject: nmdc:93a820606e0fe511f779745a01717e58 +INFO:root:PassingDataObject: nmdc:0cc29caa1246200252fce8bfaaa3d803 +INFO:root:PassingDataObject: nmdc:cc507caa472e76e4642c926282f36b67 +INFO:root:PassingDataObject: nmdc:d1db161303d97ddfe5b79b785b50723c +INFO:root:PassingDataObject: nmdc:c65794466378df17f8ce1624b79c60f9 +INFO:root:PassingDataObject: nmdc:3d6b0c8615ca31add58183d74e16f621 +INFO:root:PassingDataObject: nmdc:9662f2d65d4be4fcb97eb3ef95ffb3cf +INFO:root:PassingDataObject: nmdc:8c88f7115fcfe23ab6c175118845f615 +INFO:root:PassingDataObject: nmdc:7e88f0e8b275ba85fac312b289fffa06 +INFO:root:PassingDataObject: nmdc:9c13b4453db85b7106779c00ea2c16de +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:2feeb1b123648e8f5393d943b723e78e, Annotation Activity for nmdc:mga0fsjy84 +INFO:root:PassingDataObject: nmdc:d4b3f64dcaded3af5846ea7866e051fc +INFO:root:PassingDataObject: nmdc:1ef381b79dee18c389aa2d5246ecaf39 +INFO:root:PassingDataObject: nmdc:ca7fda8bd08a812e7372964ef3c35d0a +INFO:root:PassingDataObject: nmdc:a645e4c652d06fd5da16f3ce86cc6781 +INFO:root:PassingDataObject: nmdc:8bc4862b365d3b72d5ed4556189a7418 +INFO:root:PassingDataObject: nmdc:3203922ee08c41267a9c8bca7cb36b76 +INFO:root:PassingDataObject: nmdc:9ae7dc6dde29181b1c92fab0433e1c0e +INFO:root:PassingDataObject: nmdc:c56902af7c121f5be6e6b82aff4fef25 +INFO:root:PassingDataObject: nmdc:1f1cc467bc5b0f0eae2ab28f430c0dfe +INFO:root:PassingDataObject: nmdc:8ab817c014d3c78e05607eaa3d4ef90c +INFO:root:PassingDataObject: nmdc:35cf6d84cfa7589ad9d2e9463d4839a7 +INFO:root:PassingDataObject: nmdc:78ad449952c6573b354bebb80fe5a253 +INFO:root:PassingDataObject: nmdc:8ccdc966ef2227f6bcfc15d1907e8fd6 +INFO:root:PassingDataObject: nmdc:b960751d2da1fcf3ed075a697f1bda50 +INFO:root:PassingDataObject: nmdc:2fb40ccd828ba6d61870703a3ab26d31 +INFO:root:PassingDataObject: nmdc:8b2b56702173b4d49b2517b240bee22c +INFO:root:PassingDataObject: nmdc:9dd1e2ca8089271c728d49218509c465 +INFO:root:PassingDataObject: nmdc:36f1a47956ab5d41b96599d4b865ab5b +INFO:root:PassingDataObject: nmdc:6ade3822fab260ef4ff3c7e640a90c23 +INFO:root:PassingDataObject: nmdc:0015902413ee59e532aa0e0a6826687c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:2feeb1b123648e8f5393d943b723e78e +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2feeb1b123648e8f5393d943b723e78e, Annotation Activity for nmdc:mga0fsjy84 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452679 +INFO:root:found 3 records +INFO:root:record: nmdc:cd53d94cd24a985ad8b65ba22b946f85, MAGs Analysis Activity for nmdc:mga044re36 +INFO:root:PassingDataObject: nmdc:20e75a55753a61bda3c6f70ad927351c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:cd53d94cd24a985ad8b65ba22b946f85 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:cd53d94cd24a985ad8b65ba22b946f85, MAGs Analysis Activity for nmdc:mga044re36 +INFO:root:record: nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee, MAGs Analysis Activity for nmdc:mga0hvd050 +INFO:root:PassingDataObject: nmdc:a88387e5f6b317111d24f1b65d257be2 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee, MAGs Analysis Activity for nmdc:mga0hvd050 +INFO:root:record: nmdc:2feeb1b123648e8f5393d943b723e78e, MAGs Analysis Activity for nmdc:mga0fsjy84 +INFO:root:PassingDataObject: nmdc:f6d0883287e4192a9a2f52f48686f8ec +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2feeb1b123648e8f5393d943b723e78e +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2feeb1b123648e8f5393d943b723e78e, MAGs Analysis Activity for nmdc:mga0fsjy84 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452679 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-qjk04g21 +INFO:root:legacy_id: gold:Gp0452545 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-qjk04g21 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:e63d328bc9bf66cdf6c51204cb941d46 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:19bd893f3b1d83c1a0c0aa1903f27de3 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452545 +INFO:root:found 2 records +INFO:root:record: nmdc:abfb7870007bce99025896707a2bf38e, Read QC Activity for nmdc:mga0rmyk67 +INFO:root:PassingDataObject: nmdc:bafbffcb53bbfdeb4d27a8960d248b81 +INFO:root:PassingDataObject: nmdc:22a7439c1dff19b311665dcaefadd0db +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:fa880e6ce942e17e43322b7c61208af4, Read QC Activity for nmdc:mga0vssw66 +INFO:root:PassingDataObject: nmdc:ef1fcebf317bc0548795b05eafa9ec62 +INFO:root:PassingDataObject: nmdc:b6b2e05653a357fdc1cb1d1932504a7d +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452545 +INFO:root:found 2 records +INFO:root:record: nmdc:abfb7870007bce99025896707a2bf38e, ReadBased Analysis Activity for nmdc:mga0rmyk67 +INFO:root:PassingDataObject: nmdc:d3189c9aab22180722c409f8a5f7e5b0 +INFO:root:PassingDataObject: nmdc:777056cc59aed34ca70d3a1830083bb0 +INFO:root:PassingDataObject: nmdc:1b19cd6e803080223af9b72b410c3b58 +INFO:root:PassingDataObject: nmdc:89c62b676230b54e849bd59b97cb2b24 +INFO:root:PassingDataObject: nmdc:9b22c5991d416d03acc6cd9b532fca64 +INFO:root:PassingDataObject: nmdc:244eae7b965eda43e3bf14f41ffd8ec0 +INFO:root:PassingDataObject: nmdc:e992fdb8f823f6bb170927365e747d6b +INFO:root:PassingDataObject: nmdc:1202c80739eeca3a271d1381d5fb661a +INFO:root:PassingDataObject: nmdc:bf9b3efbbb4f8c26e529da8ff83b0887 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:fa880e6ce942e17e43322b7c61208af4, ReadBased Analysis Activity for nmdc:mga0vssw66 +INFO:root:PassingDataObject: nmdc:02dea50b50f4b3d3f88f39621020b7bf +INFO:root:PassingDataObject: nmdc:5890d59f1d4631a2290d9e0a65dac9ed +INFO:root:PassingDataObject: nmdc:3205bc493c346711c619a7b3367a02de +INFO:root:PassingDataObject: nmdc:618dff9f6f7ba7268551b7a09c1ef62d +INFO:root:PassingDataObject: nmdc:e351b5f9f2aa8538e7e217b9e251cf98 +INFO:root:PassingDataObject: nmdc:fa8ece1882279e09fa43c61621cac967 +INFO:root:PassingDataObject: nmdc:53f8b02a993b75a553f22c3cb9227ca0 +INFO:root:PassingDataObject: nmdc:f389836823c8e1670ace319c50c094a5 +INFO:root:PassingDataObject: nmdc:743a18a39573883438d9910ff77394b0 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452545 +INFO:root:found 2 records +INFO:root:record: nmdc:abfb7870007bce99025896707a2bf38e, Assembly Activity for nmdc:mga0rmyk67 +INFO:root:PassingDataObject: nmdc:b658f602b10e0646f83ac1f497811e04 +INFO:root:PassingDataObject: nmdc:b8030a68a2666f532248b7ffac58ae56 +INFO:root:PassingDataObject: nmdc:15bf1c26d51bc8839c2cfab09dc46a65 +INFO:root:PassingDataObject: nmdc:f2c11a18ffafe71f1997da743043f425 +INFO:root:PassingDataObject: nmdc:2d26bcfb7b68a3e07f221d768924a08b +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:fa880e6ce942e17e43322b7c61208af4, Assembly Activity for nmdc:mga0vssw66 +INFO:root:PassingDataObject: nmdc:19edec2cb0ae649a9caffa6102a20052 +INFO:root:PassingDataObject: nmdc:0cd1b9381a50c75bce944bffb362ae57 +INFO:root:PassingDataObject: nmdc:0ffda92d9aee3fca104f13be86ac7407 +INFO:root:PassingDataObject: nmdc:8a134a4e62998e03fb43b0e328a4068e +INFO:root:PassingDataObject: nmdc:ea13519454c94ffbf6aa0dcc184545a7 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452545 +INFO:root:found 2 records +INFO:root:record: nmdc:abfb7870007bce99025896707a2bf38e, Annotation Activity for nmdc:mga0rmyk67 +INFO:root:PassingDataObject: nmdc:7539e46cae5153f2f23497a312441bbd +INFO:root:PassingDataObject: nmdc:81d015267bff1467cc486caa3cb2281e +INFO:root:PassingDataObject: nmdc:2905e3d425db41d4feeb3d3c80dac1a5 +INFO:root:PassingDataObject: nmdc:5ea6e8082a4b1fdc6c572fb1dcb8df11 +INFO:root:PassingDataObject: nmdc:6dad49388e6766a72ca7f5a1415b21cc +INFO:root:PassingDataObject: nmdc:7a62cfad4079a00a734c0c59311f3e2c +INFO:root:PassingDataObject: nmdc:6e11797de40f61167d50f42605d895e8 +INFO:root:PassingDataObject: nmdc:c69ace6b4f4f7c1c906b267be8326370 +INFO:root:PassingDataObject: nmdc:30818c7e4f7736596a280b32e273d788 +INFO:root:PassingDataObject: nmdc:031cd4926e3c4ba565e689291fefa7f7 +INFO:root:PassingDataObject: nmdc:e7bd208cbefd57f46a515b51d9fe8878 +INFO:root:PassingDataObject: nmdc:33d551deb2b203001babb890fd323634 +INFO:root:PassingDataObject: nmdc:85c709b35d57712ac96358a486f6cec4 +INFO:root:PassingDataObject: nmdc:e67136ae1c789f9982deaf03a67a4446 +INFO:root:PassingDataObject: nmdc:e3c3b37b38ea761fe821ddd229605a98 +INFO:root:PassingDataObject: nmdc:62df8a01bf1f069ba72259057570de70 +INFO:root:PassingDataObject: nmdc:e3e124e71c7450781bb6032e3c711122 +INFO:root:PassingDataObject: nmdc:e955b2cd0e1648695a89c0b1a6d008bf +INFO:root:PassingDataObject: nmdc:48389334c5ff1b0d9cdf43f15e1f4a71 +INFO:root:PassingDataObject: nmdc:b5846728ad302f88c06cfc5b09648d77 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:abfb7870007bce99025896707a2bf38e +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:abfb7870007bce99025896707a2bf38e, Annotation Activity for nmdc:mga0rmyk67 +INFO:root:record: nmdc:fa880e6ce942e17e43322b7c61208af4, Annotation Activity for nmdc:mga0vssw66 +INFO:root:PassingDataObject: nmdc:79b2eaa689ecd7b1caf0d0ba6592c67d +INFO:root:PassingDataObject: nmdc:d3a79b05860d0db30014f96ad4632663 +INFO:root:PassingDataObject: nmdc:4b9827de55e763e198d02a3587bf196e +INFO:root:PassingDataObject: nmdc:49177dd805b971249c4510e44a6dbb7e +INFO:root:PassingDataObject: nmdc:529cdb874ad8592a28c69d87f57dc1d5 +INFO:root:PassingDataObject: nmdc:f192906a1dd69057d6c9e03153d6b2fb +INFO:root:PassingDataObject: nmdc:77cd01e6d07fd6c03a25bab2709b40a3 +INFO:root:PassingDataObject: nmdc:8100dcfcef9655ade1cd50cca309dea0 +INFO:root:PassingDataObject: nmdc:d3664d26cf2580e4a939d4edb05c9163 +INFO:root:PassingDataObject: nmdc:77af6e99e5f46cb0f15713d67ea12b38 +INFO:root:PassingDataObject: nmdc:25fd054c9c83221a6fed59cafdccd211 +INFO:root:PassingDataObject: nmdc:5db1be7de5ebde40c92c8170ed7af350 +INFO:root:PassingDataObject: nmdc:10362316fc0009623b8b5d51381c4085 +INFO:root:PassingDataObject: nmdc:50b9f3e625effc16ed152a02dd0ed2f6 +INFO:root:PassingDataObject: nmdc:0402254d1230feb8bf0c1ebd5570ca75 +INFO:root:PassingDataObject: nmdc:3ca94050d4bdc86c472d545a85e30232 +INFO:root:PassingDataObject: nmdc:70fea2cd03957cf1b22b460f0173340c +INFO:root:PassingDataObject: nmdc:95e44b9e97bda40443a7aae1a30fee65 +INFO:root:PassingDataObject: nmdc:01537fadf348f7ea288c9819fcef80b8 +INFO:root:PassingDataObject: nmdc:4ebd27b7b7bba5898781f5121aefba14 +INFO:root:PassingDataObject: nmdc:ceda8abd5aba9572f3f99dded0749be6 +INFO:root:PassingDataObject: nmdc:f615c947178fbe859207cb434c5ab346 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452545 +INFO:root:found 2 records +INFO:root:record: nmdc:abfb7870007bce99025896707a2bf38e, MAGs Analysis Activity for nmdc:mga0rmyk67 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:abfb7870007bce99025896707a2bf38e +ERROR:root:FailedDataObject: nmdc:0fb01c32a7dac4ddf430463b82fb0e6b, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:abfb7870007bce99025896707a2bf38e, MAGs Analysis Activity for nmdc:mga0rmyk67 +INFO:root:record: nmdc:fa880e6ce942e17e43322b7c61208af4, MAGs Analysis Activity for nmdc:mga0vssw66 +INFO:root:PassingDataObject: nmdc:85dc2d06306f8bd168a680d298dabdb6 +INFO:root:PassingDataObject: nmdc:616d9848e4eaae7979a2ca2f464628ef +INFO:root:passing_data_objects: 2 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452545 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-0hzy6t26 +INFO:root:legacy_id: gold:Gp0452566 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-0hzy6t26 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:20a7f00f17d4a251bb70b80bd109c8e7 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452566 +INFO:root:found 1 records +INFO:root:record: nmdc:539e08bbfd509979d50fb41dadf78bb0, Read QC Activity for nmdc:mga0zkx760 +INFO:root:PassingDataObject: nmdc:eac9031563f8e64cc2a9808a76d07434 +INFO:root:PassingDataObject: nmdc:3843ceca122fa9fc4ca42d0afbccbb50 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452566 +INFO:root:found 1 records +INFO:root:record: nmdc:539e08bbfd509979d50fb41dadf78bb0, ReadBased Analysis Activity for nmdc:mga0zkx760 +INFO:root:PassingDataObject: nmdc:20cb0bcbbb8915229b37cb3933b11e04 +INFO:root:PassingDataObject: nmdc:32582afb2bbc2dff1c0afb65b7befade +INFO:root:PassingDataObject: nmdc:9a476fc486efd7ac702e95bdec37500a +INFO:root:PassingDataObject: nmdc:60421d8f6478e66a99f9128cc44f52d4 +INFO:root:PassingDataObject: nmdc:9fb39cd642eb2fc9226a6ac8fe5de3a8 +INFO:root:PassingDataObject: nmdc:595cda202f4ffc74a358b7465dc34fa9 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:539e08bbfd509979d50fb41dadf78bb0 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:539e08bbfd509979d50fb41dadf78bb0 +ERROR:root:FailedDataObject: nmdc:c741746ff92e0ff4e0c451dda347e9e7, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:539e08bbfd509979d50fb41dadf78bb0, ReadBased Analysis Activity for nmdc:mga0zkx760 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452566 +INFO:root:found 1 records +INFO:root:record: nmdc:539e08bbfd509979d50fb41dadf78bb0, Assembly Activity for nmdc:mga0zkx760 +INFO:root:PassingDataObject: nmdc:c06b4858c4fb2648aeb10001bfbb75c8 +INFO:root:PassingDataObject: nmdc:3c4635af4af4f4853974686241575007 +INFO:root:PassingDataObject: nmdc:c0561fd5503a94ece559bee6ddab1f66 +INFO:root:PassingDataObject: nmdc:5ad36832ac98d2007c42009c2081f918 +INFO:root:PassingDataObject: nmdc:273a35962ef332ad610ee7c3c18e376c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452566 +INFO:root:found 1 records +INFO:root:record: nmdc:539e08bbfd509979d50fb41dadf78bb0, Annotation Activity for nmdc:mga0zkx760 +INFO:root:PassingDataObject: nmdc:5cadf5208067807c721223b6ebe7ecb3 +INFO:root:PassingDataObject: nmdc:e65e907fb3b506e29fe5b34a75b7edf9 +INFO:root:PassingDataObject: nmdc:0ea7de5ac200a65cf21039e25a940471 +INFO:root:PassingDataObject: nmdc:f62b2f3a4fd04f715a33335663fb6fcd +INFO:root:PassingDataObject: nmdc:6b9261d122fb6d62fe7ccf834762894c +INFO:root:PassingDataObject: nmdc:85ebf0228a5d8ae11aaceaf0564ab278 +INFO:root:PassingDataObject: nmdc:4fd3d415dee9df173b8222f06d8385bc +INFO:root:PassingDataObject: nmdc:d15801b8ffd64b8c0f517fdcdb606305 +INFO:root:PassingDataObject: nmdc:da465c8bf4b2038e87bfbc9cb6d83dd4 +INFO:root:PassingDataObject: nmdc:76af9eb4246f5e6f249d31aa05c9a4ef +INFO:root:PassingDataObject: nmdc:54db3af2696bc656ba928ffd177d9d17 +INFO:root:PassingDataObject: nmdc:4dd7d0ca4399f46aeab11a1ae0d16137 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:539e08bbfd509979d50fb41dadf78bb0 +ERROR:root:FailedDataObject: nmdc:18a374542062ebb370750cb57f26c52c, +ERROR:root:FailedDataObject: nmdc:0ba9c3aca86e404f1a0ae0f7e1dea1c4, +ERROR:root:failing_data_objects: 14 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:539e08bbfd509979d50fb41dadf78bb0, Annotation Activity for nmdc:mga0zkx760 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452566 +INFO:root:found 1 records +INFO:root:record: nmdc:539e08bbfd509979d50fb41dadf78bb0, MAGs Analysis Activity for nmdc:mga0zkx760 +INFO:root:PassingDataObject: nmdc:2712a9a5e253cd9bb4dbb5280c66eacd +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:539e08bbfd509979d50fb41dadf78bb0 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:539e08bbfd509979d50fb41dadf78bb0, MAGs Analysis Activity for nmdc:mga0zkx760 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452566 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-6z46yd72 +INFO:root:legacy_id: gold:Gp0452691 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-6z46yd72 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:bdea55553df53f1ca0e90b75fdcc6386 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:07bc1760701378f267baf14553b56981 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:1de7e44f009cb6342c42fad43420eb1f +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:cd66e0df81d714aeee7ea15a71d98136 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452691 +INFO:root:found 4 records +INFO:root:record: nmdc:5feaf75791ef10ef1f0b7872734d9d91, Read QC Activity for nmdc:mga0ee3723 +INFO:root:PassingDataObject: nmdc:aaf7e521a0b2d8deac820e7b9d19585d +INFO:root:PassingDataObject: nmdc:1a11c2dd7c9763cef8d67aeb599c25c4 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:78e09701d462b85b6ae8787d0b3922c9, Read QC Activity for nmdc:mga070qp45 +INFO:root:PassingDataObject: nmdc:636a45d9f67e26d5b239fbdb2426f0fc +INFO:root:PassingDataObject: nmdc:a23a1f97c2a11529afd5e2d370ef233f +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:2f7c1eddf0a8209aefe0fddea9587ba7, Read QC Activity for nmdc:mga02nm607 +INFO:root:PassingDataObject: nmdc:2476e56a873fc0af858ec963fd590dd8 +INFO:root:PassingDataObject: nmdc:0dc4e0b1016b80d36149729c0c0a5c82 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:f11c5a11d8af0b661bc511b78c1a272b, Read QC Activity for nmdc:mga0f9xs83 +INFO:root:PassingDataObject: nmdc:29189dc0eff7543ed18b3fb1598812a9 +INFO:root:PassingDataObject: nmdc:86ac2dc4aaee84a6034bebabf421768b +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 4 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452691 +INFO:root:found 4 records +INFO:root:record: nmdc:78e09701d462b85b6ae8787d0b3922c9, ReadBased Analysis Activity for nmdc:mga070qp45 +INFO:root:PassingDataObject: nmdc:53827171a86f8ab2115a1ea8b2a9bd95 +INFO:root:PassingDataObject: nmdc:610427862c6abc10e3171ef01e7cc6af +INFO:root:PassingDataObject: nmdc:676923bcaaa2329f70d6294361a61da4 +INFO:root:PassingDataObject: nmdc:741e47d4030dca5baf9f8fbc150fc1bc +INFO:root:PassingDataObject: nmdc:070f773c0d974aea9d739cff0ddd00f1 +INFO:root:PassingDataObject: nmdc:9021dc34f9542cc3364b753f05f9cd51 +INFO:root:PassingDataObject: nmdc:4821653fa4c20feb7454095a58ecef73 +INFO:root:PassingDataObject: nmdc:7fcec264d26182cf4e2cf14d51a55c3f +INFO:root:PassingDataObject: nmdc:63a0e2e9df893439058e52913f606fb0 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:2f7c1eddf0a8209aefe0fddea9587ba7, ReadBased Analysis Activity for nmdc:mga02nm607 +INFO:root:PassingDataObject: nmdc:758cbe492fa84096e72e596e42f4da0f +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:2f7c1eddf0a8209aefe0fddea9587ba7 +ERROR:root:FailedDataObject: nmdc:600550975ffee571de6153fabd6c73c9, +ERROR:root:FailedDataObject: nmdc:2d4af2fb6005595855c84f4985d9ed38, +ERROR:root:FailedDataObject: nmdc:21de874ee8ca47d74ca506c15d7f3d35, +ERROR:root:FailedDataObject: nmdc:9ca30e7229e555264daef78a8f53b943, +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:2f7c1eddf0a8209aefe0fddea9587ba7 +ERROR:root:FailedDataObject: nmdc:8fae7dcd60e7daff2a3f0acba90479e1, +ERROR:root:FailedDataObject: nmdc:31af298968f07b296e28a798ca751315, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2f7c1eddf0a8209aefe0fddea9587ba7, ReadBased Analysis Activity for nmdc:mga02nm607 +INFO:root:record: nmdc:5feaf75791ef10ef1f0b7872734d9d91, ReadBased Analysis Activity for nmdc:mga0ee3723 +INFO:root:PassingDataObject: nmdc:08142dfe4bf11c0210a47c2935d7c36d +INFO:root:PassingDataObject: nmdc:c7a5c8621edb44e9541c26dacd199403 +INFO:root:PassingDataObject: nmdc:dcb247db8ea1150fcbf3f021677029c4 +INFO:root:PassingDataObject: nmdc:96f32b6cd9ac6cc10a20b37ac17f4cec +INFO:root:PassingDataObject: nmdc:7e5ae45dfdc60c2d018c9af460a0c920 +INFO:root:PassingDataObject: nmdc:a73dd41a7488a4b6d24d4a8f98356580 +INFO:root:PassingDataObject: nmdc:5e104bb429efc3244e760be1aaed5d9b +INFO:root:PassingDataObject: nmdc:044cb8936ee1373f20cf59f80d921c06 +INFO:root:PassingDataObject: nmdc:f18a65b6ca6ad68c723a28e94c35de75 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:f11c5a11d8af0b661bc511b78c1a272b, ReadBased Analysis Activity for nmdc:mga0f9xs83 +INFO:root:PassingDataObject: nmdc:40ea77fa0b0d14468efc77f5f091ba1a +INFO:root:PassingDataObject: nmdc:18333ff65fc7f2b0eb5e89b9a8969b5e +INFO:root:PassingDataObject: nmdc:34f7ad5b62931b0632f0c3c3670cf79c +INFO:root:PassingDataObject: nmdc:614712632ce27cf999f5dd0c8c8b6e8f +INFO:root:PassingDataObject: nmdc:1a6fb08365978dd9756e8c9018545105 +INFO:root:PassingDataObject: nmdc:04df1d1fac59ce762bd797ec6bcf6794 +INFO:root:PassingDataObject: nmdc:dd689357f641314760407497fd8a242b +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:f11c5a11d8af0b661bc511b78c1a272b +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:f11c5a11d8af0b661bc511b78c1a272b +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f11c5a11d8af0b661bc511b78c1a272b, ReadBased Analysis Activity for nmdc:mga0f9xs83 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452691 +INFO:root:found 4 records +INFO:root:record: nmdc:5feaf75791ef10ef1f0b7872734d9d91, Assembly Activity for nmdc:mga0ee3723 +INFO:root:PassingDataObject: nmdc:f73ea5fff3e8fb777b5265ecc272da1e +INFO:root:PassingDataObject: nmdc:1820836396ee65bec8a023f0779f538f +INFO:root:PassingDataObject: nmdc:083dd541f331392324ec4afd5ac138d0 +INFO:root:PassingDataObject: nmdc:18098b37f27e9e0e547d4cc7654e0d85 +INFO:root:PassingDataObject: nmdc:3c5173158fbd3e92801bed291e7fcd67 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:78e09701d462b85b6ae8787d0b3922c9, Assembly Activity for nmdc:mga070qp45 +INFO:root:PassingDataObject: nmdc:b1311fecdae94656e2e2c89646903a37 +INFO:root:PassingDataObject: nmdc:3380003531b483071e5a68b46dd890ac +INFO:root:PassingDataObject: nmdc:7968cf27f46b60fa52ff784c7aaf77db +INFO:root:PassingDataObject: nmdc:19a4413c6e8bf7d925a4d20bf87f1fcc +INFO:root:PassingDataObject: nmdc:22e0e6fe18033706ee1b9c0b625b3eab +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:2f7c1eddf0a8209aefe0fddea9587ba7, Assembly Activity for nmdc:mga02nm607 +INFO:root:PassingDataObject: nmdc:522a53086160e0a25cb394b9cfd8e04a +INFO:root:PassingDataObject: nmdc:2692092c77cf5e60772d356d009e31a2 +INFO:root:PassingDataObject: nmdc:77000ea9223577598e801879e172a820 +INFO:root:PassingDataObject: nmdc:0ecd65ad4e86a4db61a7d10592348c8d +INFO:root:PassingDataObject: nmdc:e6fce1b5a95c44f0b202cfc1c22a3440 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:f11c5a11d8af0b661bc511b78c1a272b, Assembly Activity for nmdc:mga0f9xs83 +INFO:root:PassingDataObject: nmdc:cd71bb44626c2f0c9e0c0664d70c21fd +INFO:root:PassingDataObject: nmdc:883a2cd212d78f0caf9d5861391171fd +INFO:root:PassingDataObject: nmdc:382f73cfae49054cd187e733c82cc695 +INFO:root:PassingDataObject: nmdc:67a1df8c0318c8e45462c69f5ce5621b +INFO:root:PassingDataObject: nmdc:68efd3a7a802562489384eff4991d8a5 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 4 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452691 +INFO:root:found 4 records +INFO:root:record: nmdc:5feaf75791ef10ef1f0b7872734d9d91, Annotation Activity for nmdc:mga0ee3723 +INFO:root:PassingDataObject: nmdc:93f6cc9d04f85f296ae7f3d12b885923 +INFO:root:PassingDataObject: nmdc:3460321bcfb4f77a05094549178f6034 +INFO:root:PassingDataObject: nmdc:8920cbd973ae22bb5fefea80d4d0150f +INFO:root:PassingDataObject: nmdc:02989b0eaadb51184556eda88c747894 +INFO:root:PassingDataObject: nmdc:aa18b3bd4fa1e7c482fde8a835863fbf +INFO:root:PassingDataObject: nmdc:3d808b93a027e1edf2116ae808bd42cb +INFO:root:PassingDataObject: nmdc:f9ac5d790f40b65e79dd60149ef0317b +INFO:root:PassingDataObject: nmdc:de729261402a71f56eb4a46494f92488 +INFO:root:PassingDataObject: nmdc:c77c83fc640b0d682bf4917d066d1c6a +INFO:root:PassingDataObject: nmdc:35c5ed26d7f9fa70f175b6c6dfbae529 +INFO:root:PassingDataObject: nmdc:e331f1215483db39de36a57107ca0475 +INFO:root:PassingDataObject: nmdc:c87cb253a24bd4eef759b571ff358f54 +INFO:root:PassingDataObject: nmdc:0d4bf0a22cbd8ca614ee683eb3de3b0e +INFO:root:PassingDataObject: nmdc:6c37020f2707a5c5eb0f12435e2904be +INFO:root:PassingDataObject: nmdc:cde36f975e04ec5dfea49a0d7b8773ca +INFO:root:PassingDataObject: nmdc:917fd21ad5931bc54bdffef90ae69517 +INFO:root:PassingDataObject: nmdc:011f96849e4041832475c4334eb1a7bb +INFO:root:PassingDataObject: nmdc:b6db4eb55aa50c5449ab2d68ccb1ef93 +INFO:root:PassingDataObject: nmdc:3c6e7336d05a3d654817c45dd8cd14c9 +INFO:root:PassingDataObject: nmdc:9c4b4f03cfef2243121664c162d66d6c +INFO:root:PassingDataObject: nmdc:d0220825b30b0f8930a720e8a4579a65 +INFO:root:PassingDataObject: nmdc:828a28990a68cf3173fbee91d9f0f805 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:2f7c1eddf0a8209aefe0fddea9587ba7, Annotation Activity for nmdc:mga02nm607 +INFO:root:PassingDataObject: nmdc:078ac3c5638276d35b4a4012bbd6797b +INFO:root:PassingDataObject: nmdc:6cb6d6c85e0af2737d1d8751bb865a4c +INFO:root:PassingDataObject: nmdc:c11cd9535b5dec6ae653c1db099776c0 +INFO:root:PassingDataObject: nmdc:4069e965fc0878c1b6d94490400ae499 +INFO:root:PassingDataObject: nmdc:d51f8cf81e49d4812a1604abc13ed3e3 +INFO:root:PassingDataObject: nmdc:6bd447256bb898b838aef92ecf130501 +INFO:root:PassingDataObject: nmdc:6ad51e8fb4e69d8e9dcdef0d04c68c57 +INFO:root:PassingDataObject: nmdc:5772814be4a70ca3b581c0c2224a3df6 +INFO:root:PassingDataObject: nmdc:e12f63076d8044c95b68e8efdcd8ac20 +INFO:root:PassingDataObject: nmdc:5c46a0e93aad0aef81ad4c1c20045ef3 +INFO:root:PassingDataObject: nmdc:bc2a862136827c508621252fc3a98d0b +INFO:root:PassingDataObject: nmdc:d438140d0d523a3e7b17b1a247bc11be +INFO:root:PassingDataObject: nmdc:735ed5e26f0a66560977b4155c6b52f0 +INFO:root:PassingDataObject: nmdc:d40e8a8d11bc829251b4431896b9420b +INFO:root:PassingDataObject: nmdc:9e71e056215da08c8a1584a8790ca053 +INFO:root:PassingDataObject: nmdc:7c06544ff8bd722890700bec8ff475a3 +INFO:root:PassingDataObject: nmdc:7d3f64a1c2057ba6a7dff54ac5946311 +INFO:root:PassingDataObject: nmdc:cd595fd3ecddff0ea5ba40297d5f03e8 +INFO:root:PassingDataObject: nmdc:4135ad9192d4983deccba63267d54b66 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:2f7c1eddf0a8209aefe0fddea9587ba7 +ERROR:root:FailedDataObject: nmdc:782bb78719e1add58fcd47f48f8da575, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2f7c1eddf0a8209aefe0fddea9587ba7, Annotation Activity for nmdc:mga02nm607 +INFO:root:record: nmdc:f11c5a11d8af0b661bc511b78c1a272b, Annotation Activity for nmdc:mga0f9xs83 +INFO:root:PassingDataObject: nmdc:76c93ac8c920fe5412ea32ac40d7845a +INFO:root:PassingDataObject: nmdc:963721c9d51a98f20a787ddc46612878 +INFO:root:PassingDataObject: nmdc:466cfdc84a50cd9d4e717daea525dc5f +INFO:root:PassingDataObject: nmdc:792a3cac4af42dbc00f767fb593847db +INFO:root:PassingDataObject: nmdc:c3f81966d53878859014c791dc358aaa +INFO:root:PassingDataObject: nmdc:7b425c679327e49923188624ae2d2ca1 +INFO:root:PassingDataObject: nmdc:d43c158d93610688836dcf5e17a68767 +INFO:root:PassingDataObject: nmdc:4d6291a384fdfa29d7ec5feb7999722b +INFO:root:PassingDataObject: nmdc:8c87977c7b7423fe46b178db831068bb +INFO:root:PassingDataObject: nmdc:82623b0019b5fc89574604c8365e123f +INFO:root:PassingDataObject: nmdc:13da6af383a4c9dbe0c2b1f8ebfc8f2d +INFO:root:PassingDataObject: nmdc:461c2fd91d16cafbd302fc8e390f1aa8 +INFO:root:PassingDataObject: nmdc:1460eb7271270e6d9e238fbcf89d3454 +INFO:root:PassingDataObject: nmdc:0c6a6f841a59e4a75691cb6f3ca858a6 +INFO:root:PassingDataObject: nmdc:f15782bf3619edf74791242d3fbf3d97 +INFO:root:PassingDataObject: nmdc:f1afe63210c96f8ee101212ff980efbe +INFO:root:PassingDataObject: nmdc:4877c0ba41b6fe464fea63f042655c37 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:f11c5a11d8af0b661bc511b78c1a272b +ERROR:root:FailedDataObject: nmdc:efb38446ac65b8968ab8c902e538390b, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f11c5a11d8af0b661bc511b78c1a272b, Annotation Activity for nmdc:mga0f9xs83 +INFO:root:record: nmdc:78e09701d462b85b6ae8787d0b3922c9, Annotation Activity for nmdc:mga070qp45 +INFO:root:PassingDataObject: nmdc:b0cc3d41866e4714f8c88c9aba28da95 +INFO:root:PassingDataObject: nmdc:06dc33a66b4b0d987c604ee971219212 +INFO:root:PassingDataObject: nmdc:961c6666c6d8117c397ffcf7a265f268 +INFO:root:PassingDataObject: nmdc:ec72f86d79528a3174421ba4344d3247 +INFO:root:PassingDataObject: nmdc:e6be4704abcdbd5a314416d30b8e0ce8 +INFO:root:PassingDataObject: nmdc:ac6519b95d25459b3d75db17685aba04 +INFO:root:PassingDataObject: nmdc:8e6c1d081e937e05a15bd34ea083ffb8 +INFO:root:PassingDataObject: nmdc:d3e36df243116791d2c62a5cc295544c +INFO:root:PassingDataObject: nmdc:0b66a0b556c79c0ff2af4d5515a5c5b8 +INFO:root:PassingDataObject: nmdc:1f856734099ec46941209fb4105d47b9 +INFO:root:PassingDataObject: nmdc:0c882fc9885d5d3939883e3b2d90ad23 +INFO:root:PassingDataObject: nmdc:4434d6e02673d9652dacfd6f9e157fb2 +INFO:root:PassingDataObject: nmdc:6ff7f509a81bbac07c658313bdbfa1e0 +INFO:root:PassingDataObject: nmdc:d41c7345fbf719797b11fb731345f839 +INFO:root:PassingDataObject: nmdc:f243d074979fde633192380e583cdf4c +INFO:root:PassingDataObject: nmdc:4ff903aeaae0d6c7bb2c23fdf254eaeb +INFO:root:PassingDataObject: nmdc:da6ce298bd090175ec916e064c9fd00e +INFO:root:PassingDataObject: nmdc:744195975738780eabbac34ac1ac3924 +INFO:root:PassingDataObject: nmdc:73f15917e219531a606b9455cef98573 +INFO:root:PassingDataObject: nmdc:af5dba81db916cbc75b97617cfa00722 +INFO:root:PassingDataObject: nmdc:c899081aa12b9131a1d059c81fca1385 +INFO:root:PassingDataObject: nmdc:e5ae63c2f8f6592c8d6182b117ed19ee +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452691 +INFO:root:found 4 records +INFO:root:record: nmdc:5feaf75791ef10ef1f0b7872734d9d91, MAGs Analysis Activity for nmdc:mga0ee3723 +INFO:root:PassingDataObject: nmdc:4e7a6f4ca926a627723c2de35bf0706b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5feaf75791ef10ef1f0b7872734d9d91 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5feaf75791ef10ef1f0b7872734d9d91, MAGs Analysis Activity for nmdc:mga0ee3723 +INFO:root:record: nmdc:78e09701d462b85b6ae8787d0b3922c9, MAGs Analysis Activity for nmdc:mga070qp45 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:78e09701d462b85b6ae8787d0b3922c9 +ERROR:root:FailedDataObject: nmdc:acfdf24e12bcb923b9d463fdd80ebc9f, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:78e09701d462b85b6ae8787d0b3922c9, MAGs Analysis Activity for nmdc:mga070qp45 +INFO:root:record: nmdc:2f7c1eddf0a8209aefe0fddea9587ba7, MAGs Analysis Activity for nmdc:mga02nm607 +INFO:root:PassingDataObject: nmdc:967df797a098888771ad3ea575eac9bf +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2f7c1eddf0a8209aefe0fddea9587ba7 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2f7c1eddf0a8209aefe0fddea9587ba7, MAGs Analysis Activity for nmdc:mga02nm607 +INFO:root:record: nmdc:f11c5a11d8af0b661bc511b78c1a272b, MAGs Analysis Activity for nmdc:mga0f9xs83 +INFO:root:PassingDataObject: nmdc:81b950f7d3df977ca5a0a09769470b5b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:f11c5a11d8af0b661bc511b78c1a272b +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f11c5a11d8af0b661bc511b78c1a272b, MAGs Analysis Activity for nmdc:mga0f9xs83 +ERROR:root:FailedRecords: mags_activity_set, 4 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452691 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-j6hha503 +INFO:root:legacy_id: gold:Gp0452561 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-j6hha503 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:53afdcc2f537c18b3c4112386deb5f64 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2ebf2fd9287cafe9925a74f51b69c510 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452561 +INFO:root:found 2 records +INFO:root:record: nmdc:67e6a9c55ac3afe9fd54fddc99827a2e, Read QC Activity for nmdc:mga04ret48 +INFO:root:PassingDataObject: nmdc:2ef37a6ffa76d7f32925ef4b2b092c55 +INFO:root:PassingDataObject: nmdc:109159ee6dbd6898238d0e3da1d489e5 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:d533e523349cb3022c751be9d28c5995, Read QC Activity for nmdc:mga0ap6f42 +INFO:root:PassingDataObject: nmdc:69688471d3c243611354ad38dd5f2f6c +INFO:root:PassingDataObject: nmdc:371529de4beb98888ad39485ff2b2e32 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452561 +INFO:root:found 2 records +INFO:root:record: nmdc:d533e523349cb3022c751be9d28c5995, ReadBased Analysis Activity for nmdc:mga0ap6f42 +INFO:root:PassingDataObject: nmdc:708b7cdb169f4795eaa572ea30d5abd5 +INFO:root:PassingDataObject: nmdc:ea3a43d5676266dd09a8b4c2df7ed829 +INFO:root:PassingDataObject: nmdc:465d9371050d42954bd20fc7e05722c7 +INFO:root:PassingDataObject: nmdc:3b7397c3873f23b8c418a27c59d4ca32 +INFO:root:PassingDataObject: nmdc:256800a7dc1f2ea6cbf9ef2e9b22ced6 +INFO:root:PassingDataObject: nmdc:44d2652ec94d0efc1b1f82f85d097e9d +INFO:root:PassingDataObject: nmdc:812d705bc38920428a7901dffe6aef19 +INFO:root:PassingDataObject: nmdc:982df8662e155cfc21be301fc5ce917c +INFO:root:PassingDataObject: nmdc:f3e4f485dfbf6046209fa891d8810f8b +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:67e6a9c55ac3afe9fd54fddc99827a2e, ReadBased Analysis Activity for nmdc:mga04ret48 +INFO:root:PassingDataObject: nmdc:fc909249800f7b0ab69acf71bd046794 +INFO:root:PassingDataObject: nmdc:c804e64f08654be4642c53ab20ee4ecf +INFO:root:PassingDataObject: nmdc:5782a730061536326533ff601b62e4a9 +INFO:root:PassingDataObject: nmdc:e000658fcb9faa89b059ebab3875a868 +INFO:root:PassingDataObject: nmdc:aa4dbfff5a30809d41b4c0dc74a7d404 +INFO:root:PassingDataObject: nmdc:020207c98cfb6e1ea75d6ef4fd82fd12 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:67e6a9c55ac3afe9fd54fddc99827a2e +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:67e6a9c55ac3afe9fd54fddc99827a2e +ERROR:root:FailedDataObject: nmdc:f5c97b20b57f39d8ec47876c3f04921f, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:67e6a9c55ac3afe9fd54fddc99827a2e, ReadBased Analysis Activity for nmdc:mga04ret48 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452561 +INFO:root:found 2 records +INFO:root:record: nmdc:67e6a9c55ac3afe9fd54fddc99827a2e, Assembly Activity for nmdc:mga04ret48 +INFO:root:PassingDataObject: nmdc:0b4093e515858d8657a82e4a28aa9c40 +INFO:root:PassingDataObject: nmdc:35c87163b1039861d0d438c984290706 +INFO:root:PassingDataObject: nmdc:ea5b90a21ea146f9aa3f51faa4923286 +INFO:root:PassingDataObject: nmdc:faba4f148b5acd525d80a1d7ab28f2cf +INFO:root:PassingDataObject: nmdc:b80017d47554b5e3ccb7388401e1e318 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:d533e523349cb3022c751be9d28c5995, Assembly Activity for nmdc:mga0ap6f42 +INFO:root:PassingDataObject: nmdc:d83ec9800b1e09add8cdca35914ee9fb +INFO:root:PassingDataObject: nmdc:36133f2fbb9c5e5461d6ac99b9490fbb +INFO:root:PassingDataObject: nmdc:94dd8f6dcae22288b2c1d5d325be7958 +INFO:root:PassingDataObject: nmdc:6efec31eea8a4f7392a90d65fb1062e4 +INFO:root:PassingDataObject: nmdc:1e5c987e0bc869a69bd7ce0959ce2c89 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452561 +INFO:root:found 2 records +INFO:root:record: nmdc:d533e523349cb3022c751be9d28c5995, Annotation Activity for nmdc:mga0ap6f42 +INFO:root:PassingDataObject: nmdc:2705a0289cb92493fa35098e509d813f +INFO:root:PassingDataObject: nmdc:edc139b574838d2c61c9debb61163562 +INFO:root:PassingDataObject: nmdc:238ed08075164d778b20e17bfc1777d4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:d533e523349cb3022c751be9d28c5995 +ERROR:root:FailedDataObject: nmdc:810266e869c06f45fee4897daba24aba, +ERROR:root:FailedDataObject: nmdc:241d9a1a99a7ca2691b78092b043c2ed, +ERROR:root:FailedDataObject: nmdc:f5b16b581698fab73191fefaf28d158c, +ERROR:root:FailedDataObject: nmdc:73048f32b5517c3717b800d0f342d159, +ERROR:root:FailedDataObject: nmdc:66c66d129c4d9ba2a7f69a4faa74aea0, +ERROR:root:FailedDataObject: nmdc:ac7e9b70ac9855a2ff7cf568ad815703, +ERROR:root:FailedDataObject: nmdc:a655b0c90894b71100acfa48df821399, +ERROR:root:FailedDataObject: nmdc:53a44e0315d1504e055ffca62259fd56, +ERROR:root:FailedDataObject: nmdc:c8d99053ad550551104c1090ec91a8e2, +ERROR:root:FailedDataObject: nmdc:466fead7a7f85ca37767513c5c765178, +ERROR:root:FailedDataObject: nmdc:13bba7b068d41c151f48d27798dd26a2, +ERROR:root:FailedDataObject: nmdc:7aef26ddeec2b59cd80d4b7989ef1375, +ERROR:root:FailedDataObject: nmdc:499f6c314680771629213c0f2f07d0eb, +ERROR:root:FailedDataObject: nmdc:5e5cfebe958edf3016f00678113c1649, +ERROR:root:FailedDataObject: nmdc:cbab79917a03a532b83bedf00c871922, +ERROR:root:FailedDataObject: nmdc:df72a91162f5a72935b47ae8fc5fdf74, +ERROR:root:FailedDataObject: nmdc:ef318a260c5d1420d07fe71e06d9e99b, +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d533e523349cb3022c751be9d28c5995, Annotation Activity for nmdc:mga0ap6f42 +INFO:root:record: nmdc:67e6a9c55ac3afe9fd54fddc99827a2e, Annotation Activity for nmdc:mga04ret48 +INFO:root:PassingDataObject: nmdc:bd242767306039ee55d9845706822c1e +INFO:root:PassingDataObject: nmdc:976c1324ef80c644ee5a902964c9fd5e +INFO:root:PassingDataObject: nmdc:f523cbfdad693a539b07776833125a41 +INFO:root:PassingDataObject: nmdc:87301e95f856a3779fecec79b18d756b +INFO:root:PassingDataObject: nmdc:69e842d7b6ececbcfd79405ef770ef9a +INFO:root:PassingDataObject: nmdc:cceba73722857a0188d3b2b242918a9e +INFO:root:PassingDataObject: nmdc:4302a48e13b59930e55576b1725c7a26 +INFO:root:PassingDataObject: nmdc:e28034881a0ef17fd3593ece757910d0 +INFO:root:PassingDataObject: nmdc:9a787e53843f714cbde1e72b6344afcc +INFO:root:PassingDataObject: nmdc:f99353b110c00d44c93bdec1b86001a6 +INFO:root:PassingDataObject: nmdc:80a995e8864edf510546e8df5e9c111a +INFO:root:PassingDataObject: nmdc:fcfc6bac7e8d66d1cab75e06596555fc +INFO:root:PassingDataObject: nmdc:4e35f88b298a111c87f5d2b86d9b3657 +INFO:root:PassingDataObject: nmdc:6f3283a3e071518a63819d9dee0450fc +INFO:root:PassingDataObject: nmdc:70125f63bd0ae0ceb036af1f51003569 +INFO:root:PassingDataObject: nmdc:8cb01b9366721a101ffe1dee354a0b5f +INFO:root:PassingDataObject: nmdc:4d13939b3396185f5196b85a1073c26c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:67e6a9c55ac3afe9fd54fddc99827a2e +ERROR:root:FailedDataObject: nmdc:4c4f80cf811dd3be837696cdee388b07, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:67e6a9c55ac3afe9fd54fddc99827a2e, Annotation Activity for nmdc:mga04ret48 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452561 +INFO:root:found 2 records +INFO:root:record: nmdc:67e6a9c55ac3afe9fd54fddc99827a2e, MAGs Analysis Activity for nmdc:mga04ret48 +INFO:root:PassingDataObject: nmdc:266fdc439fef53298047fa295d328e3e +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:67e6a9c55ac3afe9fd54fddc99827a2e +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:67e6a9c55ac3afe9fd54fddc99827a2e, MAGs Analysis Activity for nmdc:mga04ret48 +INFO:root:record: nmdc:d533e523349cb3022c751be9d28c5995, MAGs Analysis Activity for nmdc:mga0ap6f42 +INFO:root:PassingDataObject: nmdc:4870a7b1dc6f35b0d0389ba6da558819 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:d533e523349cb3022c751be9d28c5995 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d533e523349cb3022c751be9d28c5995, MAGs Analysis Activity for nmdc:mga0ap6f42 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452561 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-tptb8f25 +INFO:root:legacy_id: gold:Gp0452724 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-tptb8f25 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:036fcc94116f659d73c4323636fec91a +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452724 +INFO:root:found 1 records +INFO:root:record: nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e, Read QC Activity for nmdc:mga03m5e87 +INFO:root:PassingDataObject: nmdc:8be517787347e73f42ed7d0ff73dfe38 +INFO:root:PassingDataObject: nmdc:0fad0153ad6a5f2a0bc4301d06a904d1 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452724 +INFO:root:found 1 records +INFO:root:record: nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e, ReadBased Analysis Activity for nmdc:mga03m5e87 +INFO:root:PassingDataObject: nmdc:7c599eee33f52d6c746e710382095f0d +INFO:root:PassingDataObject: nmdc:77a1481424f6fcf2074cfd56d9fa0a51 +INFO:root:PassingDataObject: nmdc:470ef2da05264faab431f0d4bf7bff6b +INFO:root:PassingDataObject: nmdc:785f93a7ee5cceb8f131cb52e427b990 +INFO:root:PassingDataObject: nmdc:9bea3264b878e3d30b01f4e6f2a564e0 +INFO:root:PassingDataObject: nmdc:ec367c2bc1ddd6e66c97d1fd8e1c70e5 +INFO:root:PassingDataObject: nmdc:71cd83b894f585e21fd6e08a37296d3a +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e, ReadBased Analysis Activity for nmdc:mga03m5e87 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452724 +INFO:root:found 1 records +INFO:root:record: nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e, Assembly Activity for nmdc:mga03m5e87 +INFO:root:PassingDataObject: nmdc:f42b85db76c5184c7618f7cf145d715a +INFO:root:PassingDataObject: nmdc:d84d170d89488fca8d89ba8fec4d19da +INFO:root:PassingDataObject: nmdc:9da405c842e1c5dfe00896138dc7dee8 +INFO:root:PassingDataObject: nmdc:288d37079a050e97d582e73a249865d8 +INFO:root:PassingDataObject: nmdc:928c991cb61b15a822919c3ca1172cc0 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452724 +INFO:root:found 1 records +INFO:root:record: nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e, Annotation Activity for nmdc:mga03m5e87 +INFO:root:PassingDataObject: nmdc:f87cf2aa6b43e8300a7b458bae9d0424 +INFO:root:PassingDataObject: nmdc:9d9a1b248b01e833bce2c61747849d0b +INFO:root:PassingDataObject: nmdc:8d2c68bd2e59f6ffb4c610300cb93329 +INFO:root:PassingDataObject: nmdc:bf42628de2bf1556550632244dab7948 +INFO:root:PassingDataObject: nmdc:5064d2d3dba3c767eca4867d046815f3 +INFO:root:PassingDataObject: nmdc:a098623986c3d5c1ebad8be644425a2a +INFO:root:PassingDataObject: nmdc:edbf424e6a3ed952c36f6cd5ab988a9a +INFO:root:PassingDataObject: nmdc:c2b111fbaf1ad2e2a3170d32a3858c57 +INFO:root:PassingDataObject: nmdc:60248e99d34dd4ead8c371820bbf8111 +INFO:root:PassingDataObject: nmdc:c0c14de1bc2d06b709561db47cf29677 +INFO:root:PassingDataObject: nmdc:bbeff020b12eb49304588598d820e841 +INFO:root:PassingDataObject: nmdc:2f41e4989be7320753b146a8c2833fa3 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e +ERROR:root:FailedDataObject: nmdc:9b7e354da04575f41ab1aea79a691dfe, +ERROR:root:failing_data_objects: 13 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e, Annotation Activity for nmdc:mga03m5e87 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452724 +INFO:root:found 1 records +INFO:root:record: nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e, MAGs Analysis Activity for nmdc:mga03m5e87 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e +ERROR:root:FailedDataObject: nmdc:6147d3df37207319ed29ba030d50996d, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e, MAGs Analysis Activity for nmdc:mga03m5e87 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452724 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-edr8dc22 +INFO:root:legacy_id: gold:Gp0452664 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-edr8dc22 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:64f55af4ae6631117cfea17626fcebd7 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452664 +INFO:root:found 1 records +INFO:root:record: nmdc:646232463a320f632905db3739ca9d3e, Read QC Activity for nmdc:mga0dwaj03 +INFO:root:PassingDataObject: nmdc:f0ec9bf124301ae7b8bbdc1b375686f8 +INFO:root:PassingDataObject: nmdc:540309d5ef126bfcb18ac6934740f626 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452664 +INFO:root:found 1 records +INFO:root:record: nmdc:646232463a320f632905db3739ca9d3e, ReadBased Analysis Activity for nmdc:mga0dwaj03 +INFO:root:PassingDataObject: nmdc:a6b90635357e938328249f65b5779bfa +INFO:root:PassingDataObject: nmdc:d0c7b864cd0ef87fc9f4c599fb82ce7b +INFO:root:PassingDataObject: nmdc:58c70dabfe193f027a2b613b71efe23a +INFO:root:PassingDataObject: nmdc:e94b01a64181d511667ae47b235a1408 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:646232463a320f632905db3739ca9d3e +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:646232463a320f632905db3739ca9d3e +ERROR:root:FailedDataObject: nmdc:ef1f2c159949d7603e8ead16090d3b86, +ERROR:root:FailedDataObject: nmdc:b706d0a52f86aadd1d6b0e7e4bb6440b, +ERROR:root:FailedDataObject: nmdc:1e588fc6badac6f27cf1f013a4bb6ca1, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:646232463a320f632905db3739ca9d3e, ReadBased Analysis Activity for nmdc:mga0dwaj03 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452664 +INFO:root:found 1 records +INFO:root:record: nmdc:646232463a320f632905db3739ca9d3e, Assembly Activity for nmdc:mga0dwaj03 +INFO:root:PassingDataObject: nmdc:6ddee8b7406a51a92df0dc3712aa91e7 +INFO:root:PassingDataObject: nmdc:74dbce23fc112f9a0fc737ba9951dca1 +INFO:root:PassingDataObject: nmdc:15023cb60e06ba34b612e1bd4eda836e +INFO:root:PassingDataObject: nmdc:c17dc03ad05a856566b26c3ae48d9d50 +INFO:root:PassingDataObject: nmdc:f3491ffa00b1a6b25768635b431ecf60 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452664 +INFO:root:found 1 records +INFO:root:record: nmdc:646232463a320f632905db3739ca9d3e, Annotation Activity for nmdc:mga0dwaj03 +INFO:root:PassingDataObject: nmdc:aa9c805375ad67f05ac0ddb0c9c4af72 +INFO:root:PassingDataObject: nmdc:998c9541456eb2661a1e0ba4e6e5ffcf +INFO:root:PassingDataObject: nmdc:31aee696af2bfca6f8ff4ec4e160bc7d +INFO:root:PassingDataObject: nmdc:818f08f1dc8ae77bd4d86fbdb3e83728 +INFO:root:PassingDataObject: nmdc:ba6b82bcc781f4e27d84c28699f6058c +INFO:root:PassingDataObject: nmdc:1fad91aca7ba49ac7111b0a1e1f621c8 +INFO:root:PassingDataObject: nmdc:f7244a43a1c342589173c101c2cf0df6 +INFO:root:PassingDataObject: nmdc:72ba2eee02b7f3051e17e82e3f9e1796 +INFO:root:PassingDataObject: nmdc:03bd24001bb0fe95f68be041c1548b6e +INFO:root:PassingDataObject: nmdc:59752d1816ab652d530df6b349bb1be8 +INFO:root:PassingDataObject: nmdc:8f1e6ce5c721d8b7f5eac8843f3d8976 +INFO:root:PassingDataObject: nmdc:956c132d058c247dd9840575902cbeae +INFO:root:PassingDataObject: nmdc:8b6e54f1fc8ada29c10213f0bba436d5 +INFO:root:PassingDataObject: nmdc:80fa86cb4a8196787f53d58548ba6986 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:646232463a320f632905db3739ca9d3e +ERROR:root:FailedDataObject: nmdc:7d432429856ddde55ba46966daf291ac, +ERROR:root:FailedDataObject: nmdc:c86e8e650ba0f4d9bb67b5cd35744174, +ERROR:root:failing_data_objects: 16 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:646232463a320f632905db3739ca9d3e, Annotation Activity for nmdc:mga0dwaj03 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452664 +INFO:root:found 1 records +INFO:root:record: nmdc:646232463a320f632905db3739ca9d3e, MAGs Analysis Activity for nmdc:mga0dwaj03 +INFO:root:PassingDataObject: nmdc:420c108c68107fd965409d0c75629c18 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:646232463a320f632905db3739ca9d3e +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:646232463a320f632905db3739ca9d3e, MAGs Analysis Activity for nmdc:mga0dwaj03 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452664 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-c117p064 +INFO:root:legacy_id: gold:Gp0452644 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-c117p064 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:23e5e4db9bc50bfe1f4c589ad132311e +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:3a9bfef334c1803d2985e25dc52c2c9d +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452644 +INFO:root:found 2 records +INFO:root:record: nmdc:426ebdb57f0a26f83c50fc2e689487a7, Read QC Activity for nmdc:mga0d6j428 +INFO:root:PassingDataObject: nmdc:1b83f43ddefbbe61bbad1533aaacc34e +INFO:root:PassingDataObject: nmdc:d52baf6f767835e4f5dcc3919573f1a5 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:25a33bff39a1bbbc5fe451dee6bcbe51, Read QC Activity for nmdc:mga0014j80 +INFO:root:PassingDataObject: nmdc:e231a060707ff38894bc17cce4fa7ad4 +INFO:root:PassingDataObject: nmdc:747535d369ee1ee35d76ccc214b203a0 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452644 +INFO:root:found 2 records +INFO:root:record: nmdc:25a33bff39a1bbbc5fe451dee6bcbe51, ReadBased Analysis Activity for nmdc:mga0014j80 +INFO:root:PassingDataObject: nmdc:4670f82dcf03900b8f7a3cf674252a20 +INFO:root:PassingDataObject: nmdc:461f10f10096b5bc5c66e13042d1a579 +INFO:root:PassingDataObject: nmdc:593644ed2300b892800597fc97c70855 +INFO:root:PassingDataObject: nmdc:673714f7cf73889ec4a6d49b92f9ea3b +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:25a33bff39a1bbbc5fe451dee6bcbe51 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:25a33bff39a1bbbc5fe451dee6bcbe51 +ERROR:root:FailedDataObject: nmdc:8605611e72914194d2b31b908ecf54d0, +ERROR:root:FailedDataObject: nmdc:d02fb7a595bdbb0f8e3d8035df8f3f25, +ERROR:root:FailedDataObject: nmdc:80c82ba8f4876de8e7255058364b1454, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:25a33bff39a1bbbc5fe451dee6bcbe51, ReadBased Analysis Activity for nmdc:mga0014j80 +INFO:root:record: nmdc:426ebdb57f0a26f83c50fc2e689487a7, ReadBased Analysis Activity for nmdc:mga0d6j428 +INFO:root:PassingDataObject: nmdc:401a808f0a420b62b899bc5617de81ad +INFO:root:PassingDataObject: nmdc:c5393797ded85a810465e113d746b3e7 +INFO:root:PassingDataObject: nmdc:0079b8982aa7402c971983dcf0ac27b2 +INFO:root:PassingDataObject: nmdc:b486e5d137307b574d7cda24446683e2 +INFO:root:PassingDataObject: nmdc:d113f222f1d629e3971dfa7b6bc40410 +INFO:root:PassingDataObject: nmdc:96779066adc2e8538a55ec56db3fa08a +INFO:root:PassingDataObject: nmdc:e51c43a1e9f0354628c31ab1a7901ec5 +INFO:root:PassingDataObject: nmdc:8cef699d5cf391f3c4e77bc058314573 +INFO:root:PassingDataObject: nmdc:baa75cda86043e2d0790fd8d94f2a66f +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452644 +INFO:root:found 2 records +INFO:root:record: nmdc:25a33bff39a1bbbc5fe451dee6bcbe51, Assembly Activity for nmdc:mga0014j80 +INFO:root:PassingDataObject: nmdc:c4200f095bf7cd847c0e4065d0c40f64 +INFO:root:PassingDataObject: nmdc:539d626f0c6691e47c77275509e5052e +INFO:root:PassingDataObject: nmdc:927fc292a947b2ed8da367a6778d0c53 +INFO:root:PassingDataObject: nmdc:e63a3ef54680959a5e05f80693007223 +INFO:root:PassingDataObject: nmdc:d5257deeab70745263e1d494588ec532 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:426ebdb57f0a26f83c50fc2e689487a7, Assembly Activity for nmdc:mga0d6j428 +INFO:root:PassingDataObject: nmdc:a39758ce3ef38f35961c84e9cac13603 +INFO:root:PassingDataObject: nmdc:22ad6af6e953b0e2598f01bde06ca585 +INFO:root:PassingDataObject: nmdc:6fb947d0d16bc4b78104de6a54079e0f +INFO:root:PassingDataObject: nmdc:3d65740bcd8e45b10912864f183d3807 +INFO:root:PassingDataObject: nmdc:322a6116a3beb8bbef5c1f0cfb2421a0 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452644 +INFO:root:found 2 records +INFO:root:record: nmdc:426ebdb57f0a26f83c50fc2e689487a7, Annotation Activity for nmdc:mga0d6j428 +INFO:root:PassingDataObject: nmdc:f8f1b621d008ca487fedbf7b66ae76f3 +INFO:root:PassingDataObject: nmdc:e2875e4a0ebc58b10c6c24856e32cc7d +INFO:root:PassingDataObject: nmdc:f6cb05cb806fb108b0ca8a1ec8d79684 +INFO:root:PassingDataObject: nmdc:b86882911cc410fb2d85ede2678e20e0 +INFO:root:PassingDataObject: nmdc:45626e1c23ac56b2f23de6834104aaba +INFO:root:PassingDataObject: nmdc:d2a6f24d7a9ac60a71331a5c725adbfc +INFO:root:PassingDataObject: nmdc:b4cc8df119c531c1e735341608eecb09 +INFO:root:PassingDataObject: nmdc:f085ca9f32d26cc72d8a75b749f1eed8 +INFO:root:PassingDataObject: nmdc:41a354a3cb1a93e7d3e0a758ef44bf8f +INFO:root:PassingDataObject: nmdc:da7218d3d9ebed62abcdf970f0e471aa +INFO:root:PassingDataObject: nmdc:007faaf5985a82364b189b62af19f91f +INFO:root:PassingDataObject: nmdc:73fb1493bce7ce13291220b949a351ae +INFO:root:PassingDataObject: nmdc:4dff59a600d405b4350496e25a4f901c +INFO:root:PassingDataObject: nmdc:814353b94fbe4203695d3203c983e7f0 +INFO:root:PassingDataObject: nmdc:94a6617eae3ed3368c048b15bd454d13 +INFO:root:PassingDataObject: nmdc:65ebd4c6c9f5095fc2a9545168031dc2 +INFO:root:PassingDataObject: nmdc:5cc79079757aacde64b6658662f13915 +INFO:root:PassingDataObject: nmdc:c667b41cf0c03816e15d577fd3ef437e +INFO:root:PassingDataObject: nmdc:249bd2f60276522a4c19ad8cbce1802f +INFO:root:PassingDataObject: nmdc:993eb0792e6fef67f48817ecb9317891 +INFO:root:PassingDataObject: nmdc:052b9229a1cb17dd30af3aa6ed31cb81 +INFO:root:PassingDataObject: nmdc:211344a9496f55103ff74e6a96b3abb4 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:25a33bff39a1bbbc5fe451dee6bcbe51, Annotation Activity for nmdc:mga0014j80 +INFO:root:PassingDataObject: nmdc:ce9d91017c5a1e8f77b0d88e643ee4da +INFO:root:PassingDataObject: nmdc:3e0c6b952a36c6d9c8626a75bb2f2fa6 +INFO:root:PassingDataObject: nmdc:d33d72cb61bd8f0e9bb546eb52e91c78 +INFO:root:PassingDataObject: nmdc:9c40f03e1f5b307c98174d26ca4a6761 +INFO:root:PassingDataObject: nmdc:55953b424ef8ddcbed5e8e7014f8dc7e +INFO:root:PassingDataObject: nmdc:697a1e7dee6fa430db004f67d662e5cb +INFO:root:PassingDataObject: nmdc:2b2956040040df0312bf5a250be5d4e2 +INFO:root:PassingDataObject: nmdc:494abd15ac826070836248b273e2ab6e +INFO:root:PassingDataObject: nmdc:ee7620cf3003a0e4284aae0ef58eab3f +INFO:root:PassingDataObject: nmdc:64771800adb2d5c6871ef08eec312126 +INFO:root:PassingDataObject: nmdc:d2219111ccbab6294c54e1fd497906dc +INFO:root:PassingDataObject: nmdc:ad8022a7ff9d2f57c0ec9070eb9faa51 +INFO:root:PassingDataObject: nmdc:4e5728e39fdb8ee6faca79fa641cbf11 +INFO:root:PassingDataObject: nmdc:9fe2ca0e5c3ed76f132290fabe3a400b +INFO:root:PassingDataObject: nmdc:cbe202d931b50399a8014a23e6076a0b +INFO:root:PassingDataObject: nmdc:c9cbb17cd8414aeb471cd1c56ca03873 +INFO:root:PassingDataObject: nmdc:1c35753be703b6fb53738caadae7fb93 +INFO:root:PassingDataObject: nmdc:1ddb6a3869c8f4c68f30e170588a7fa2 +INFO:root:PassingDataObject: nmdc:daaefbe75676ca6dffe2f0e399b10558 +INFO:root:PassingDataObject: nmdc:3644c17a4e54d9374a95d9a6f552e064 +INFO:root:PassingDataObject: nmdc:2acfee400c7fc10253d3caa8aa3193c2 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:25a33bff39a1bbbc5fe451dee6bcbe51 +ERROR:root:failing_data_objects: 21 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:25a33bff39a1bbbc5fe451dee6bcbe51, Annotation Activity for nmdc:mga0014j80 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452644 +INFO:root:found 2 records +INFO:root:record: nmdc:25a33bff39a1bbbc5fe451dee6bcbe51, MAGs Analysis Activity for nmdc:mga0014j80 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:25a33bff39a1bbbc5fe451dee6bcbe51 +ERROR:root:FailedDataObject: nmdc:3a86c98b995e97c1702d039a9f3f264e, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:25a33bff39a1bbbc5fe451dee6bcbe51, MAGs Analysis Activity for nmdc:mga0014j80 +INFO:root:record: nmdc:426ebdb57f0a26f83c50fc2e689487a7, MAGs Analysis Activity for nmdc:mga0d6j428 +INFO:root:PassingDataObject: nmdc:6f8986e151ab1d92d9fdb4f4509db519 +INFO:root:PassingDataObject: nmdc:1926a07e9d4b55fd4c1a1bc4f5956926 +INFO:root:passing_data_objects: 2 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452644 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-eb0yq579 +INFO:root:legacy_id: gold:Gp0452727 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-eb0yq579 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:da61a53a9e909cccebe7ae4795968991 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b79c6f3b64a07393995e01e10c49513b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452727 +INFO:root:found 2 records +INFO:root:record: nmdc:e5c2e5fcb7fc8a6ff7c80014cd54d4de, Read QC Activity for nmdc:mga01ekv53 +INFO:root:PassingDataObject: nmdc:55d42dd727d46ad784de1aa3fdb0db5c +INFO:root:PassingDataObject: nmdc:bf8f02638e7aade3bcfb2a0eb3eb4803 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:0dc9201ce663d253fb5aa22d2e0a2d30, Read QC Activity for nmdc:mga0dncm66 +INFO:root:PassingDataObject: nmdc:8d48ff70affeb5a630d6bdb336c1ad4c +INFO:root:PassingDataObject: nmdc:8f81ce429e3a1e2f1f1b9adbe0a3eaed +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452727 +INFO:root:found 2 records +INFO:root:record: nmdc:e5c2e5fcb7fc8a6ff7c80014cd54d4de, ReadBased Analysis Activity for nmdc:mga01ekv53 +INFO:root:PassingDataObject: nmdc:874e345268fb2605dbdbff9eaea6f04d +INFO:root:PassingDataObject: nmdc:66602a8d1aa06a36ed2f8c98ae4c3a14 +INFO:root:PassingDataObject: nmdc:b735813947b814e73cab51031fc83647 +INFO:root:PassingDataObject: nmdc:efb6f44b73d847ace2e8d3d35fdcfed7 +INFO:root:PassingDataObject: nmdc:a3d9e9741625d312a98a51bf3aba164d +INFO:root:PassingDataObject: nmdc:397c75d34bda2d8aeab05a5cde3c8bd8 +INFO:root:PassingDataObject: nmdc:de3d4e5479d7d8fbd618d3b6bd38627e +INFO:root:PassingDataObject: nmdc:ba59be67c927d63d1880df9f8982ddb7 +INFO:root:PassingDataObject: nmdc:2b83932a9e44a9aefa07d0600825e12b +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:0dc9201ce663d253fb5aa22d2e0a2d30, ReadBased Analysis Activity for nmdc:mga0dncm66 +INFO:root:PassingDataObject: nmdc:9cc6c90587c27c0af6491353011fd023 +INFO:root:PassingDataObject: nmdc:d8b8455952ce2dbe8f1cf43083e79962 +INFO:root:PassingDataObject: nmdc:6c32651f291c5790737b364e52e17d32 +INFO:root:PassingDataObject: nmdc:1ad3365a9b720d871163bf4d4d449d84 +INFO:root:PassingDataObject: nmdc:65da4516d57ec36d07d1de54f6a8d630 +INFO:root:PassingDataObject: nmdc:64f93f984ace93442867c278cecd9e54 +INFO:root:PassingDataObject: nmdc:4c0d94705b40dbb82de424939ad4e358 +INFO:root:PassingDataObject: nmdc:a854114cf24a915628040fb1ce6424ba +INFO:root:PassingDataObject: nmdc:17eacc1d250e351ba1941c2e491e8f25 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452727 +INFO:root:found 2 records +INFO:root:record: nmdc:e5c2e5fcb7fc8a6ff7c80014cd54d4de, Assembly Activity for nmdc:mga01ekv53 +INFO:root:PassingDataObject: nmdc:1d023f613215d69a1bfb9c1ddc71da91 +INFO:root:PassingDataObject: nmdc:02208599b1c1b036df03d1f25e5ff06c +INFO:root:PassingDataObject: nmdc:8cea047dbae9f88961cb004a24cf01a8 +INFO:root:PassingDataObject: nmdc:bf0438cbfd096e5f80c510063d7b69c5 +INFO:root:PassingDataObject: nmdc:df0d4208a741e004a7943cf2355868c1 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:0dc9201ce663d253fb5aa22d2e0a2d30, Assembly Activity for nmdc:mga0dncm66 +INFO:root:PassingDataObject: nmdc:aaae4db4722354c443025fce930dc063 +INFO:root:PassingDataObject: nmdc:b18b6ff998334ad7f76535b37e2467e0 +INFO:root:PassingDataObject: nmdc:91d9aeacf9c834c4e4afa5406cd8189b +INFO:root:PassingDataObject: nmdc:b939a1836c7e898c9050d4abfb19c03a +INFO:root:PassingDataObject: nmdc:ca691a6525acab365e0b797691dab84c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452727 +INFO:root:found 2 records +INFO:root:record: nmdc:e5c2e5fcb7fc8a6ff7c80014cd54d4de, Annotation Activity for nmdc:mga01ekv53 +INFO:root:PassingDataObject: nmdc:f09d14deda1ffc0e24cb12476c737c43 +INFO:root:PassingDataObject: nmdc:df9d7d10f09a0a98c5a1746addfc7b3a +INFO:root:PassingDataObject: nmdc:ea1d9190525b40229c2730ecb66e2681 +INFO:root:PassingDataObject: nmdc:c2c04317675306a118bc17062ee93a1b +INFO:root:PassingDataObject: nmdc:8280fc559200fc3b490819331189f672 +INFO:root:PassingDataObject: nmdc:4c7672faeb9c50be1a1ee404adcd18b9 +INFO:root:PassingDataObject: nmdc:d30ef717df710536db659c7b3e8177e0 +INFO:root:PassingDataObject: nmdc:8d8bb2791565a50f2ac3f31da9d113b6 +INFO:root:PassingDataObject: nmdc:89cc4dfc95fa0ee94faa5fc1c76e2ce7 +INFO:root:PassingDataObject: nmdc:7337f406cee143edd6e8b606d9f3b2c6 +INFO:root:PassingDataObject: nmdc:a93b865d64b3aadb3d1bb4cdd16bd9a1 +INFO:root:PassingDataObject: nmdc:9e83eb99105c1877879a1a9950b40bf5 +INFO:root:PassingDataObject: nmdc:23dbc26093b16cd1f4e053793fff9a52 +INFO:root:PassingDataObject: nmdc:11e6a572812d0cd80b5b13980d2fb011 +INFO:root:PassingDataObject: nmdc:ff9421f60b5b5fecaf97930297882304 +INFO:root:PassingDataObject: nmdc:8b1a9a1376615dea2377a7dffcffa115 +INFO:root:PassingDataObject: nmdc:81faebc3c7a1135e2622fbc0bb6dae2f +INFO:root:PassingDataObject: nmdc:38c9def93e0a57958b6b2697ec85bd04 +INFO:root:PassingDataObject: nmdc:ad8688270db0cf87cfe59b32fe823e88 +INFO:root:PassingDataObject: nmdc:6df2e63720db4a82f07c693ea6478c20 +INFO:root:PassingDataObject: nmdc:42343e9385c0cb126529acf4ff874b96 +INFO:root:PassingDataObject: nmdc:c445477d3039947b6b80adf71ed1f304 +INFO:root:passing_data_objects: 22 +INFO:root:record: nmdc:0dc9201ce663d253fb5aa22d2e0a2d30, Annotation Activity for nmdc:mga0dncm66 +INFO:root:PassingDataObject: nmdc:2ffedb1922cbffa9f327086549d6c5b5 +INFO:root:PassingDataObject: nmdc:bb9175c4ed025c3ad8a0a422e7475b57 +INFO:root:PassingDataObject: nmdc:e36b75ec8af7fca6f1425070827db431 +INFO:root:PassingDataObject: nmdc:c51c51a222cec07fb5449d857b57ff43 +INFO:root:PassingDataObject: nmdc:6796e0715952916c174d199fcfee7b02 +INFO:root:PassingDataObject: nmdc:846b56c4cbd4d39dbc6b6bd139587906 +INFO:root:PassingDataObject: nmdc:adf2c13a62e404e6d5ce19f2d78a6acd +INFO:root:PassingDataObject: nmdc:9235bd4bb79fafe659b679e3f98adf61 +INFO:root:PassingDataObject: nmdc:fe32cd156c711cc8dd8c60967d978132 +INFO:root:PassingDataObject: nmdc:84ea7a4b9f6bc577e67265efb1b1d0e6 +INFO:root:PassingDataObject: nmdc:0ac546143ce334e801035644a25bab5d +INFO:root:PassingDataObject: nmdc:c78254cfe4869c9721cbb84ac983dd6d +INFO:root:PassingDataObject: nmdc:53fe2a134c091a2e0621a3d4d927c136 +INFO:root:PassingDataObject: nmdc:72b3817299e68dd72ba18e692547db97 +INFO:root:PassingDataObject: nmdc:3993600834c2c9034951943bb3485cc7 +INFO:root:PassingDataObject: nmdc:1e48c2b0d8f37f8a74df9ae432f02f40 +INFO:root:PassingDataObject: nmdc:84aac47041cf7608e0a46a748f114bcf +INFO:root:PassingDataObject: nmdc:bad137c2f985e33d7ac3913c23dbd9fa +INFO:root:PassingDataObject: nmdc:2e14a1c94bad95611835865bdedcda6a +INFO:root:PassingDataObject: nmdc:b5f1e2c64bfe830e05a2cfb59e6397e1 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:0dc9201ce663d253fb5aa22d2e0a2d30 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0dc9201ce663d253fb5aa22d2e0a2d30, Annotation Activity for nmdc:mga0dncm66 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452727 +INFO:root:found 2 records +INFO:root:record: nmdc:e5c2e5fcb7fc8a6ff7c80014cd54d4de, MAGs Analysis Activity for nmdc:mga01ekv53 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:e5c2e5fcb7fc8a6ff7c80014cd54d4de +ERROR:root:FailedDataObject: nmdc:fe87ea3f05b2fd1abf0ead8091279183, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:e5c2e5fcb7fc8a6ff7c80014cd54d4de, MAGs Analysis Activity for nmdc:mga01ekv53 +INFO:root:record: nmdc:0dc9201ce663d253fb5aa22d2e0a2d30, MAGs Analysis Activity for nmdc:mga0dncm66 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0dc9201ce663d253fb5aa22d2e0a2d30 +ERROR:root:FailedDataObject: nmdc:43ad2aeb6a7d2aba25fa5623b59e2204, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0dc9201ce663d253fb5aa22d2e0a2d30, MAGs Analysis Activity for nmdc:mga0dncm66 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452727 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-epwrz448 +INFO:root:legacy_id: gold:Gp0452565 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-epwrz448 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:6c3ab5e5e2682cd0627584141b320054 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:48f274c69404cb2e773aa85b4606e679 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452565 +INFO:root:found 2 records +INFO:root:record: nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f, Read QC Activity for nmdc:mga08w1r94 +INFO:root:PassingDataObject: nmdc:acab88c74ee10e5ee00d0a66ca6026af +INFO:root:PassingDataObject: nmdc:3ef6fd5985bcb8886533d88cedb6f136 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0, Read QC Activity for nmdc:mga02xq187 +INFO:root:PassingDataObject: nmdc:d435cc726db185d9557f4c97944fbe6a +INFO:root:PassingDataObject: nmdc:a462b5f620b4a2412f074cce0035a441 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452565 +INFO:root:found 2 records +INFO:root:record: nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f, ReadBased Analysis Activity for nmdc:mga08w1r94 +INFO:root:PassingDataObject: nmdc:fd88fd68e059690a4d5ef910ddf2b2bc +INFO:root:PassingDataObject: nmdc:d8ff01af196d0ca7aed0b590eb42bc44 +INFO:root:PassingDataObject: nmdc:91318d94af22d7aef7d05be8c30237dc +INFO:root:PassingDataObject: nmdc:7de8b463355a90b6cb2c84bc2aba0467 +INFO:root:PassingDataObject: nmdc:d194e98fe0004fe875d962fc4154c80a +INFO:root:PassingDataObject: nmdc:b428974b073ed1ae51f2deeef7ffaead +INFO:root:PassingDataObject: nmdc:097ab70c4f66f8a4e81054a0aa5cfc0c +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f, ReadBased Analysis Activity for nmdc:mga08w1r94 +INFO:root:record: nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0, ReadBased Analysis Activity for nmdc:mga02xq187 +INFO:root:PassingDataObject: nmdc:9500acfc6ace05e0548b6b6baff0e488 +INFO:root:PassingDataObject: nmdc:db81145b025065c9091398469150f0ad +INFO:root:PassingDataObject: nmdc:baee4977d85c43ad828ea0c64da4ec32 +INFO:root:PassingDataObject: nmdc:090318daf02b196822b703b6ce685010 +INFO:root:PassingDataObject: nmdc:f913421aab31248d8f84c02daccb2381 +INFO:root:PassingDataObject: nmdc:13f5731171b09cb90f38af39c736f87b +INFO:root:PassingDataObject: nmdc:5f88b1b03890deff2122ded25ff5fd0b +INFO:root:PassingDataObject: nmdc:fbbd333f9104da1c878da3c3a5df74d7 +INFO:root:PassingDataObject: nmdc:830d91ec5af58783d6aac34877646853 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452565 +INFO:root:found 2 records +INFO:root:record: nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f, Assembly Activity for nmdc:mga08w1r94 +INFO:root:PassingDataObject: nmdc:d28ef661c2117a9dc7b07bfc24d0e37a +INFO:root:PassingDataObject: nmdc:975566658b18e4443769d4825efdf42f +INFO:root:PassingDataObject: nmdc:003dfabed4fb63ab9046c93e846db898 +INFO:root:PassingDataObject: nmdc:72a3807a96f842738a260c72e5661da9 +INFO:root:PassingDataObject: nmdc:f200c95f92f4b572766a18b58ede6ff8 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0, Assembly Activity for nmdc:mga02xq187 +INFO:root:PassingDataObject: nmdc:a5fdc9782a5c380f415e6a46500a8ba5 +INFO:root:PassingDataObject: nmdc:8dcff20b18860cc1ecaa4d6189901352 +INFO:root:PassingDataObject: nmdc:c576adb296a6aab6e60ce08ba7ba8912 +INFO:root:PassingDataObject: nmdc:4e0285b9be1a0d8a19c4a6c799ccdb5f +INFO:root:PassingDataObject: nmdc:c5c32cfeef501255e88dd06cfdceca15 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452565 +INFO:root:found 2 records +INFO:root:record: nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0, Annotation Activity for nmdc:mga02xq187 +INFO:root:PassingDataObject: nmdc:96e1c861934505f2078c81b3ae5bf5c9 +INFO:root:PassingDataObject: nmdc:63c13a8bcf474d7de320c082bca82b8f +INFO:root:PassingDataObject: nmdc:8b7945e10f5943256f5e35569b2d93a9 +INFO:root:PassingDataObject: nmdc:2436a6995a5f862f2a64980e1c001f26 +INFO:root:PassingDataObject: nmdc:84485774d961a28a022fe988f8ed88e0 +INFO:root:PassingDataObject: nmdc:3c44249b56ef808e15b0b5bdb8134d7a +INFO:root:PassingDataObject: nmdc:8fa3cca252c4cf1d287421ac9a58098b +INFO:root:PassingDataObject: nmdc:ae91a5880d2d78938f85a204cf05b92d +INFO:root:PassingDataObject: nmdc:eb5658e97ba9f837e261d4f3debc18e5 +INFO:root:PassingDataObject: nmdc:ec56885a1761d1a9da698b76320994d9 +INFO:root:PassingDataObject: nmdc:5e85dd86799c69e1858089259bf009cf +INFO:root:PassingDataObject: nmdc:f7c7620493723555963c85ff8b654df1 +INFO:root:PassingDataObject: nmdc:fe5790998ce0fdf5db645f52935ff15c +INFO:root:PassingDataObject: nmdc:ece6bd63260b1673552018b6f8eb6d55 +INFO:root:PassingDataObject: nmdc:caebae874555fdb85c1db1e8b7b39d60 +INFO:root:PassingDataObject: nmdc:59da6c827638d5af78a7a5a383b9ac7b +INFO:root:PassingDataObject: nmdc:b7625b00eb3ca6fe6ae52b95fa0bb18f +INFO:root:PassingDataObject: nmdc:888d7f6724a561cfc40a4d7852df2667 +INFO:root:PassingDataObject: nmdc:5f35a17cf6ea571c2e222e0e9ed37eed +INFO:root:PassingDataObject: nmdc:7a21b0236649d24143ffdb57087270f2 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0 +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0, Annotation Activity for nmdc:mga02xq187 +INFO:root:record: nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f, Annotation Activity for nmdc:mga08w1r94 +INFO:root:PassingDataObject: nmdc:420f70e52b7de76845ed806cbd0fba89 +INFO:root:PassingDataObject: nmdc:30a6a57c7ff90f4712651f0ee5c4d4fa +INFO:root:PassingDataObject: nmdc:e98086205a6bc9a6102f395316479f6a +INFO:root:PassingDataObject: nmdc:d84b67525688f6a3b6f7cf3719e6f3fb +INFO:root:PassingDataObject: nmdc:a71ee24aa6e745f2cace57f86bc7d2af +INFO:root:PassingDataObject: nmdc:37b2533b2ac9824986d68c6021195a65 +INFO:root:PassingDataObject: nmdc:956ed47e042675ceaebc6e2ad34cfc92 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f +ERROR:root:FailedDataObject: nmdc:ab683e9b543d26edee4f7caf080de54d, +ERROR:root:FailedDataObject: nmdc:0774385996cdca4b837e2865c3435b7a, +ERROR:root:FailedDataObject: nmdc:4fba43dd6bdfc2cd2a67acacb004fb18, +ERROR:root:FailedDataObject: nmdc:5422376dc83fb98deee5c7eff2108d49, +ERROR:root:FailedDataObject: nmdc:040c8c53bfe70ca83f13fafbf708355c, +ERROR:root:FailedDataObject: nmdc:562920b264082d9501383f08f11a3f7f, +ERROR:root:FailedDataObject: nmdc:a2497914d6b3a9c89d6dcb8535d3ad3c, +ERROR:root:FailedDataObject: nmdc:52554b7f5a3814705ff56d15bd2fc8d1, +ERROR:root:FailedDataObject: nmdc:da58420cf24d2c2f24544ffbe4aaff5f, +ERROR:root:FailedDataObject: nmdc:d87ce64754669d0c36d8c6e8894a813c, +ERROR:root:failing_data_objects: 17 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f, Annotation Activity for nmdc:mga08w1r94 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452565 +INFO:root:found 2 records +INFO:root:record: nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f, MAGs Analysis Activity for nmdc:mga08w1r94 +INFO:root:PassingDataObject: nmdc:e3a53360aadead57042f6d91dc98f10e +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:24d02d93d92d9ef7f8fb2f37ad0ff87f, MAGs Analysis Activity for nmdc:mga08w1r94 +INFO:root:record: nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0, MAGs Analysis Activity for nmdc:mga02xq187 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0 +ERROR:root:FailedDataObject: nmdc:6046b568b4f0ed562660e3f6601af0a8, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0, MAGs Analysis Activity for nmdc:mga02xq187 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452565 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-tzpe8m19 +INFO:root:legacy_id: gold:Gp0452712 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-tzpe8m19 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:863cb2b6a32feaab3048145ccd9538a9 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:02a063abfa0c3dabe61cc6b09cb88bb2 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452712 +INFO:root:found 2 records +INFO:root:record: nmdc:5e551216d8b2154f91536bbf17d27216, Read QC Activity for nmdc:mga0sqaa30 +INFO:root:PassingDataObject: nmdc:db89e0b393146dd75f0c993face6948f +INFO:root:PassingDataObject: nmdc:dd73103126f5a490f872ec994b288a3e +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:bfbe2d9b5013c841006562356c54d5ee, Read QC Activity for nmdc:mga0pj4h69 +INFO:root:PassingDataObject: nmdc:6db17567cef8b80a6c89917ce8eda830 +INFO:root:PassingDataObject: nmdc:a8578c78e3d2438bb65295a4dbb21ce0 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452712 +INFO:root:found 2 records +INFO:root:record: nmdc:5e551216d8b2154f91536bbf17d27216, ReadBased Analysis Activity for nmdc:mga0sqaa30 +INFO:root:PassingDataObject: nmdc:a9e2730476f7be003c566a60f2212895 +INFO:root:PassingDataObject: nmdc:9537d58d8ecf291da7066931c13df858 +INFO:root:PassingDataObject: nmdc:d3d35467ccec16817712b50f6dbf3798 +INFO:root:PassingDataObject: nmdc:4e4798ca572e80ee58768965d2d0c932 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:5e551216d8b2154f91536bbf17d27216 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:5e551216d8b2154f91536bbf17d27216 +ERROR:root:FailedDataObject: nmdc:d4b6b65309efbdade2b7f61da3933af3, +ERROR:root:FailedDataObject: nmdc:d788674387612e2f1e5f340b9eeed9a7, +ERROR:root:FailedDataObject: nmdc:64747a8f12ede2d3321115901296d507, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5e551216d8b2154f91536bbf17d27216, ReadBased Analysis Activity for nmdc:mga0sqaa30 +INFO:root:record: nmdc:bfbe2d9b5013c841006562356c54d5ee, ReadBased Analysis Activity for nmdc:mga0pj4h69 +INFO:root:PassingDataObject: nmdc:52bd50dc0acd23c0870133fb9ba931e2 +INFO:root:PassingDataObject: nmdc:0f46379c202b8a2a11ab18a2b97200f9 +INFO:root:PassingDataObject: nmdc:9d06233b285d72bbdde630c927d57ee3 +INFO:root:PassingDataObject: nmdc:42badb14239e0918caf04903c80b77be +INFO:root:PassingDataObject: nmdc:ccf09e0c341e51355036466245df3cd3 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:bfbe2d9b5013c841006562356c54d5ee +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:bfbe2d9b5013c841006562356c54d5ee +ERROR:root:FailedDataObject: nmdc:5d69757021cba7fd23f598047853c25e, +ERROR:root:FailedDataObject: nmdc:662fc1e446ad9fb09969afdece177376, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bfbe2d9b5013c841006562356c54d5ee, ReadBased Analysis Activity for nmdc:mga0pj4h69 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452712 +INFO:root:found 2 records +INFO:root:record: nmdc:bfbe2d9b5013c841006562356c54d5ee, Assembly Activity for nmdc:mga0pj4h69 +INFO:root:PassingDataObject: nmdc:64a04348d49ac5abf24b07f4db8586cc +INFO:root:PassingDataObject: nmdc:b274b471b5d453aaa2e1fa394d66ee3b +INFO:root:PassingDataObject: nmdc:b459df0800557082314cbe135a63bf67 +INFO:root:PassingDataObject: nmdc:f662576316950eb02e3e6abf5de8a4ba +INFO:root:PassingDataObject: nmdc:60f234bcf3ef75a61cc6d9bf3580cae7 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:5e551216d8b2154f91536bbf17d27216, Assembly Activity for nmdc:mga0sqaa30 +INFO:root:PassingDataObject: nmdc:1917a56f16128378b961864ece612035 +INFO:root:PassingDataObject: nmdc:095ed495d905bb6f5870b7b55d19730e +INFO:root:PassingDataObject: nmdc:db0731e735fd14958f9cde4611817b8b +INFO:root:PassingDataObject: nmdc:b7b1cda2f03fe6a3f60e7669f8ef1c57 +INFO:root:PassingDataObject: nmdc:36adbc3fce9d781dd329719358fa61ed +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452712 +INFO:root:found 2 records +INFO:root:record: nmdc:5e551216d8b2154f91536bbf17d27216, Annotation Activity for nmdc:mga0sqaa30 +INFO:root:PassingDataObject: nmdc:1dcc61b4af13cfbc66e769070ea6ddaf +INFO:root:PassingDataObject: nmdc:681d7392877445a6d435dd98031d8cd9 +INFO:root:PassingDataObject: nmdc:4cd3144ae35b1f964a1562499c8583bb +INFO:root:PassingDataObject: nmdc:c2459c1c6e7eb6353e8dc58b6c90bb1d +INFO:root:PassingDataObject: nmdc:18a4cecf9914027a2221dffdcb6ff5a0 +INFO:root:PassingDataObject: nmdc:2c8e875a099b2cacdf973474ba3a0eb2 +INFO:root:PassingDataObject: nmdc:573836dabf7f4b960abf53207196c455 +INFO:root:PassingDataObject: nmdc:3ddd3bd9b3ae39d75383571bd3588fcc +INFO:root:PassingDataObject: nmdc:e2ec9ed831df18905172d354ec3fa0d1 +INFO:root:PassingDataObject: nmdc:57e6331e8e56e5dbba0835986120fd04 +INFO:root:PassingDataObject: nmdc:9170ce1e65a4e05295943c3fab98cd81 +INFO:root:PassingDataObject: nmdc:183a9121cefa843555cb7b5d9b3d909b +INFO:root:PassingDataObject: nmdc:4588a1aec55ec116242747b5089a3d07 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:5e551216d8b2154f91536bbf17d27216 +ERROR:root:FailedDataObject: nmdc:bbd32e97a3fddab6a96cbc1796f17ea8, +ERROR:root:FailedDataObject: nmdc:298c0f096bc73dc1525cb7d1ba4f44e6, +ERROR:root:FailedDataObject: nmdc:014de392ef8ebe699820b11eba38017e, +ERROR:root:failing_data_objects: 16 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5e551216d8b2154f91536bbf17d27216, Annotation Activity for nmdc:mga0sqaa30 +INFO:root:record: nmdc:bfbe2d9b5013c841006562356c54d5ee, Annotation Activity for nmdc:mga0pj4h69 +INFO:root:PassingDataObject: nmdc:f413439137d39d252aa665e9e3b85d6a +INFO:root:PassingDataObject: nmdc:1f0b9767317d435db9bb335ad99553c1 +INFO:root:PassingDataObject: nmdc:d2aacce8ee8d6cffd8fdb5219a619f7f +INFO:root:PassingDataObject: nmdc:941241d1fbcbb9de0f8e8cfd8debee2e +INFO:root:PassingDataObject: nmdc:e8a06185a2bedf9867d73a548475b7bb +INFO:root:PassingDataObject: nmdc:4f806a8e3d7891227e42fc69e7ef8522 +INFO:root:PassingDataObject: nmdc:91ed4df3b50980e0663a6b6797e554b2 +INFO:root:PassingDataObject: nmdc:7f22e177b3c556c49391ac92c14da765 +INFO:root:PassingDataObject: nmdc:427b2895043bf85aa23d285e2791bd93 +INFO:root:PassingDataObject: nmdc:f504b1b85118edc2ecf3c66c0be9ff34 +INFO:root:PassingDataObject: nmdc:ee5151700063b9feeac918284a8c0b07 +INFO:root:PassingDataObject: nmdc:bd4db12b1f50cc51984596a4e8aa7412 +INFO:root:PassingDataObject: nmdc:268dcd4e3a2f98ed5e5ce2ef561af2a0 +INFO:root:PassingDataObject: nmdc:c6ab0e07f53ec8a1bf6add1d56c641b2 +INFO:root:PassingDataObject: nmdc:8b7e629665665122b572c638a3165698 +INFO:root:PassingDataObject: nmdc:1ebe4588873b2ed18250e3cd8bd10cd0 +INFO:root:PassingDataObject: nmdc:9bbd8dda31c3fa65d3427c25ba334b5a +INFO:root:PassingDataObject: nmdc:dda1a44f8b218f8efa0a074b47a1765a +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:bfbe2d9b5013c841006562356c54d5ee +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bfbe2d9b5013c841006562356c54d5ee, Annotation Activity for nmdc:mga0pj4h69 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:set_name: mags_activity_set for gold:Gp0452712 +INFO:root:found 2 records +INFO:root:record: nmdc:5e551216d8b2154f91536bbf17d27216, MAGs Analysis Activity for nmdc:mga0sqaa30 +INFO:root:PassingDataObject: nmdc:9801746f342c65b835d0d4a7c14db6e7 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5e551216d8b2154f91536bbf17d27216 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5e551216d8b2154f91536bbf17d27216, MAGs Analysis Activity for nmdc:mga0sqaa30 +INFO:root:record: nmdc:bfbe2d9b5013c841006562356c54d5ee, MAGs Analysis Activity for nmdc:mga0pj4h69 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:bfbe2d9b5013c841006562356c54d5ee +ERROR:root:FailedDataObject: nmdc:1d63e930363edfb99ca52e81f2900c98, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bfbe2d9b5013c841006562356c54d5ee, MAGs Analysis Activity for nmdc:mga0pj4h69 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452712 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-1r9f1542 +INFO:root:legacy_id: gold:Gp0452661 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-1r9f1542 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b2d06264edcaaa1c81c2cf51fcc679c6 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d20f595cb751580db222a8d355c9210a +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:2fd7d0aaf1d0d32fe8579eb07a1f2cb7 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452661 +INFO:root:found 3 records +INFO:root:record: nmdc:77d3726c4b3a8717f848b336500fe69a, Read QC Activity for nmdc:mga0c8f920 +INFO:root:PassingDataObject: nmdc:f2d5b8904620d0aa463bb8e0c1cd14a6 +INFO:root:PassingDataObject: nmdc:a799f5d48e47d57973b98461c2c13f9a +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:036e589632bd9eba60ba0e0d55948a05, Read QC Activity for nmdc:mga0p46c26 +INFO:root:PassingDataObject: nmdc:57f5f635641d7fa2273c5895195ea854 +INFO:root:PassingDataObject: nmdc:40437cd5610eee63e23e31c46afe4522 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:851867da284c689c38acd222fe1b035f, Read QC Activity for nmdc:mga0rsj272 +INFO:root:PassingDataObject: nmdc:d8292961125b5b80428544c9caeba571 +INFO:root:PassingDataObject: nmdc:5b228ec634fc514f762c2553699269cd +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 3 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452661 +INFO:root:found 3 records +INFO:root:record: nmdc:77d3726c4b3a8717f848b336500fe69a, ReadBased Analysis Activity for nmdc:mga0c8f920 +INFO:root:PassingDataObject: nmdc:2fb87ca840335e5a0958367d8bed21e3 +INFO:root:PassingDataObject: nmdc:d4ee6aea72bdefa40eb39c276d1a4e8e +INFO:root:PassingDataObject: nmdc:3fbdbf723198b942219964435de7bc72 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:77d3726c4b3a8717f848b336500fe69a +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:77d3726c4b3a8717f848b336500fe69a +ERROR:root:FailedDataObject: nmdc:5dac969f10f350579822a808b51f39de, +ERROR:root:FailedDataObject: nmdc:4651d92f3ada4be2d4aebd86650f18a5, +ERROR:root:FailedDataObject: nmdc:f1b84267426bd1a113ae95acd3b8e770, +ERROR:root:FailedDataObject: nmdc:4d51059d8231d009b640465b91905d61, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:77d3726c4b3a8717f848b336500fe69a, ReadBased Analysis Activity for nmdc:mga0c8f920 +INFO:root:record: nmdc:851867da284c689c38acd222fe1b035f, ReadBased Analysis Activity for nmdc:mga0rsj272 +INFO:root:PassingDataObject: nmdc:4ccc7345d7886b87c0d5bf9aa780b765 +INFO:root:PassingDataObject: nmdc:8ec8894478ae194c6384c7d96aab3f38 +INFO:root:PassingDataObject: nmdc:4bac9372c703d6fb2c641f72ea9d115e +INFO:root:PassingDataObject: nmdc:3f9f0140a0f9ef32346dd9a5d2604b72 +INFO:root:PassingDataObject: nmdc:cbf160d8e347abd9c000a8bb5a28cda7 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:851867da284c689c38acd222fe1b035f +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:851867da284c689c38acd222fe1b035f +ERROR:root:FailedDataObject: nmdc:9bc064139f66b0443f4139de27e7a6a6, +ERROR:root:FailedDataObject: nmdc:8f9e013feee7cbd117eb7edded18cac3, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:851867da284c689c38acd222fe1b035f, ReadBased Analysis Activity for nmdc:mga0rsj272 +INFO:root:record: nmdc:036e589632bd9eba60ba0e0d55948a05, ReadBased Analysis Activity for nmdc:mga0p46c26 +INFO:root:PassingDataObject: nmdc:86d5fd78ad4e954b9a641cdcf35263d0 +INFO:root:PassingDataObject: nmdc:ba4c180a09153f0b70a53ea2080e270a +INFO:root:PassingDataObject: nmdc:857ca3572c78f46b1ea812acbc47a766 +INFO:root:PassingDataObject: nmdc:ab51db0cf72b41d6dc8722fb39529958 +INFO:root:PassingDataObject: nmdc:6265dda6a1088cedbb2b242a8c52ecc1 +INFO:root:PassingDataObject: nmdc:fb13e469c7d62eef50c7fd67bd6ac0cd +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:036e589632bd9eba60ba0e0d55948a05 +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:036e589632bd9eba60ba0e0d55948a05 +ERROR:root:FailedDataObject: nmdc:dec4ea020d35b4c9994dcdf56994c045, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:036e589632bd9eba60ba0e0d55948a05, ReadBased Analysis Activity for nmdc:mga0p46c26 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 3 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452661 +INFO:root:found 3 records +INFO:root:record: nmdc:77d3726c4b3a8717f848b336500fe69a, Assembly Activity for nmdc:mga0c8f920 +INFO:root:PassingDataObject: nmdc:bb97ce6cd70c5a87ac90b9600b5d5f40 +INFO:root:PassingDataObject: nmdc:f23df86f93ccd4a0b1ba82f1553302be +INFO:root:PassingDataObject: nmdc:5b168b12efd9f6bc00d9bc68f6b34201 +INFO:root:PassingDataObject: nmdc:d3318e16f1c0fe19af1efa3b6ff052f9 +INFO:root:PassingDataObject: nmdc:665e9827749ddc8471adbc369cfdc596 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:036e589632bd9eba60ba0e0d55948a05, Assembly Activity for nmdc:mga0p46c26 +INFO:root:PassingDataObject: nmdc:4a849bd28cf78eda297549488bf89d7c +INFO:root:PassingDataObject: nmdc:887a24fe1416368d905f167c934353fa +INFO:root:PassingDataObject: nmdc:1eff328b4f143e28efcd98db59193d99 +INFO:root:PassingDataObject: nmdc:5ec845282ce045404ef8215875a362b1 +INFO:root:PassingDataObject: nmdc:802916e73a9f25a094ebf0c7a19c2fb9 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:851867da284c689c38acd222fe1b035f, Assembly Activity for nmdc:mga0rsj272 +INFO:root:PassingDataObject: nmdc:f4f054a5bfb3ca862f57ff12b00e8392 +INFO:root:PassingDataObject: nmdc:d96d93a4a0efef63cc59df6e5783a2c7 +INFO:root:PassingDataObject: nmdc:e2d589763a16826df20cccb42c8545fe +INFO:root:PassingDataObject: nmdc:7eafcd1dd2a170a76ce7770c62f2add3 +INFO:root:PassingDataObject: nmdc:f0243155865e0f86e2d68d6bcce6d13b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 3 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452661 +INFO:root:found 3 records +INFO:root:record: nmdc:77d3726c4b3a8717f848b336500fe69a, Annotation Activity for nmdc:mga0c8f920 +INFO:root:PassingDataObject: nmdc:9c54f05f7e4d5789c59f737bdf60b645 +INFO:root:PassingDataObject: nmdc:20bb540ab65e6e98e8139bd8f7f73ad8 +INFO:root:PassingDataObject: nmdc:9291d5166d389b7a3f8b6f48e269064b +INFO:root:PassingDataObject: nmdc:d85da2107096bb7f46a3547290de91c8 +INFO:root:PassingDataObject: nmdc:b959cf1d5ca0f37d4418daeaf07f5dc6 +INFO:root:PassingDataObject: nmdc:1a3c2c320b1e43eb248ef12f674371f0 +INFO:root:PassingDataObject: nmdc:cffb1b0352c757eb24720b04b37ca5dd +INFO:root:PassingDataObject: nmdc:3ee70a82cabb895ce8918f9b83091b06 +INFO:root:PassingDataObject: nmdc:bd4b62a3abe6e1b76e2122e911e80c32 +INFO:root:PassingDataObject: nmdc:7f8907584e2d1ae7e3d98ddf0cc3e266 +INFO:root:PassingDataObject: nmdc:14e9620dcf249256a47676165c9b3fd9 +INFO:root:PassingDataObject: nmdc:d1e3ae828b67d38d7314b1b219d91b4a +INFO:root:PassingDataObject: nmdc:b755bacc88bc3db0d1d444648878eaf1 +INFO:root:PassingDataObject: nmdc:e218fcaf5222425e54fabe6ccd7b8314 +INFO:root:PassingDataObject: nmdc:7ced577c1275b2a896e42c8f7c2d4ff6 +INFO:root:PassingDataObject: nmdc:937752251f54a4ffadb89230a83fc06c +INFO:root:PassingDataObject: nmdc:1ff837adbeac93673d65f98e69ba45c9 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:77d3726c4b3a8717f848b336500fe69a +ERROR:root:FailedDataObject: nmdc:cea65469436c2d78407e367173b8857a, +ERROR:root:failing_data_objects: 18 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:77d3726c4b3a8717f848b336500fe69a, Annotation Activity for nmdc:mga0c8f920 +INFO:root:record: nmdc:851867da284c689c38acd222fe1b035f, Annotation Activity for nmdc:mga0rsj272 +INFO:root:PassingDataObject: nmdc:e4dfc3b76c87cef47e13a46b3a45f7d4 +INFO:root:PassingDataObject: nmdc:0863c7b3205a1987fb6c9dd3f645c591 +INFO:root:PassingDataObject: nmdc:f7f51894899546a83e84dc9758375f1a +INFO:root:PassingDataObject: nmdc:177713bc1a9162484411215961ac8be4 +INFO:root:PassingDataObject: nmdc:3a3ca0aa4a968b9e5be702602d47a30b +INFO:root:PassingDataObject: nmdc:7c12c1adf77c00a47879e7f1132d5c2e +INFO:root:PassingDataObject: nmdc:d02f028c603dfcfd7858b250b43ee280 +INFO:root:PassingDataObject: nmdc:90a7b0d0fe6e1156cb3ab262948f4a8a +INFO:root:PassingDataObject: nmdc:9d4d188e749525e5501d0dce017a863f +INFO:root:PassingDataObject: nmdc:f6e506397ecb678d9a2da43e388e9710 +INFO:root:PassingDataObject: nmdc:f16aa7496296e4e3acd9d388d0026be4 +INFO:root:PassingDataObject: nmdc:8eba814efd2c77e865e9df4940cac57d +INFO:root:PassingDataObject: nmdc:7f44ede9361660bf9340f6453c8e2f38 +INFO:root:PassingDataObject: nmdc:ab5c1bf47a8505e0dfcfd87a921fc23f +INFO:root:PassingDataObject: nmdc:6857abad78ab29fb823852398f4f1063 +INFO:root:PassingDataObject: nmdc:2f27e342c5878eef447d4dead49711c7 +INFO:root:PassingDataObject: nmdc:bd8dde60e6f8da4dcfc85a63869c9344 +INFO:root:PassingDataObject: nmdc:ee776ef50eb8945105a4eb0fbd6bf7fe +INFO:root:PassingDataObject: nmdc:f9169a72df9b901f5c7dc68bcb49ece0 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:851867da284c689c38acd222fe1b035f +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:851867da284c689c38acd222fe1b035f, Annotation Activity for nmdc:mga0rsj272 +INFO:root:record: nmdc:036e589632bd9eba60ba0e0d55948a05, Annotation Activity for nmdc:mga0p46c26 +INFO:root:PassingDataObject: nmdc:533dd0cfacdea28aea98b341fc9c2d47 +INFO:root:PassingDataObject: nmdc:48b02769593ee09c9d5fa61e257a751f +INFO:root:PassingDataObject: nmdc:bfb0355913eb07c5da384ecfd6c67783 +INFO:root:PassingDataObject: nmdc:b4accce52dfb92852e59e96de12b5abf +INFO:root:PassingDataObject: nmdc:72a7b99e2f65944e811b906b137bb798 +INFO:root:PassingDataObject: nmdc:a470e29ce3aa9fba75e21f5dc1694ee3 +INFO:root:PassingDataObject: nmdc:7f37bc899b57613b0508e5ba5cce2239 +INFO:root:PassingDataObject: nmdc:b013c5576ee3381d9f8c33943f207fb8 +INFO:root:PassingDataObject: nmdc:d3bea4d8c497c402f5bf1de36b45585e +INFO:root:PassingDataObject: nmdc:d98eba796f43111433903fee9bc4f3e8 +INFO:root:PassingDataObject: nmdc:3edfeed678d05d9ffbcb3118ff57c27b +INFO:root:PassingDataObject: nmdc:4dd6d16b3f9ac946379e531adcf3c762 +INFO:root:PassingDataObject: nmdc:6b4b2c4fbd2b6f136ba6cc7f8283aaf5 +INFO:root:PassingDataObject: nmdc:13d9b555d2840b40045fbc752e0f18bb +INFO:root:PassingDataObject: nmdc:cb3d00ee3621db7974cddeae0d385914 +INFO:root:PassingDataObject: nmdc:a5b0757dbb9f982968bde12c3bc7da07 +INFO:root:PassingDataObject: nmdc:cafe85b57708a35c6c8c3e254f8969ae +INFO:root:PassingDataObject: nmdc:ae3086179dc6d6f4c5b340c7c187700c +INFO:root:PassingDataObject: nmdc:548fd4b5462af802122c3f99408a8f64 +INFO:root:PassingDataObject: nmdc:cfcba4be28d861da163e5767d655777b +INFO:root:PassingDataObject: nmdc:e2fd1ad98cd9e2e23e9bd7723d26b503 +INFO:root:PassingDataObject: nmdc:7e55b8efd6dd9582c826ed820631a74a +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 2 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452661 +INFO:root:found 3 records +INFO:root:record: nmdc:77d3726c4b3a8717f848b336500fe69a, MAGs Analysis Activity for nmdc:mga0c8f920 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:77d3726c4b3a8717f848b336500fe69a +ERROR:root:FailedDataObject: nmdc:3cff8bad3fc2445599b801f140f29d26, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:77d3726c4b3a8717f848b336500fe69a, MAGs Analysis Activity for nmdc:mga0c8f920 +INFO:root:record: nmdc:036e589632bd9eba60ba0e0d55948a05, MAGs Analysis Activity for nmdc:mga0p46c26 +INFO:root:PassingDataObject: nmdc:269b75526a75c563210bd1e4a2769051 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:036e589632bd9eba60ba0e0d55948a05 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:036e589632bd9eba60ba0e0d55948a05, MAGs Analysis Activity for nmdc:mga0p46c26 +INFO:root:record: nmdc:851867da284c689c38acd222fe1b035f, MAGs Analysis Activity for nmdc:mga0rsj272 +INFO:root:PassingDataObject: nmdc:0b1848a4d866267c1cb5e51283e59a25 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:851867da284c689c38acd222fe1b035f +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:851867da284c689c38acd222fe1b035f, MAGs Analysis Activity for nmdc:mga0rsj272 +ERROR:root:FailedRecords: mags_activity_set, 3 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452661 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-rjqhxm24 +INFO:root:legacy_id: gold:Gp0452674 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-rjqhxm24 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:7cc3410140785c4c5d32b37669be7341 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:148c8bfd1df1b90e4c71087117e43cb8 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452674 +INFO:root:found 2 records +INFO:root:record: nmdc:6105530113a6a0eb9640fa8d0a13cfa0, Read QC Activity for nmdc:mga04djc33 +INFO:root:PassingDataObject: nmdc:5ff9f8062ae3871bb33166f501c8147c +INFO:root:PassingDataObject: nmdc:9afddb932fd7405388a36d33d0fb5c36 +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:d16144d105493e156a97132b64038655, Read QC Activity for nmdc:mga0gyew09 +INFO:root:PassingDataObject: nmdc:f4d9bdd44d9faf799286439c868c330e +INFO:root:PassingDataObject: nmdc:b8875d4fa648570535ea4be17179dcf0 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452674 +INFO:root:found 2 records +INFO:root:record: nmdc:6105530113a6a0eb9640fa8d0a13cfa0, ReadBased Analysis Activity for nmdc:mga04djc33 +INFO:root:PassingDataObject: nmdc:6f1643c19f689a470724cfaf4fcb462f +INFO:root:PassingDataObject: nmdc:5adf2d0bd4b4883931a0dfd3ead1ab64 +INFO:root:PassingDataObject: nmdc:f729c507adc1f398fc0f1f9549cb3c18 +INFO:root:PassingDataObject: nmdc:c9704fdddf323aab79594033708f9731 +INFO:root:PassingDataObject: nmdc:178ce86723f7543dd607448f5d14cdf2 +INFO:root:PassingDataObject: nmdc:e244a8a3a16096b8f64421242c5d087a +INFO:root:PassingDataObject: nmdc:069b4c429e4b78d1a193b5bb9ea42b30 +INFO:root:PassingDataObject: nmdc:e362848ead0f005e2f4e68ae357f54ba +INFO:root:PassingDataObject: nmdc:3c92f099f92893d292ddbb8209a1d42b +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:d16144d105493e156a97132b64038655, ReadBased Analysis Activity for nmdc:mga0gyew09 +INFO:root:PassingDataObject: nmdc:92cce9576da32f2671732d6b2f21b7f7 +INFO:root:PassingDataObject: nmdc:684ef10c2e74daeb02da6b4706aa7438 +INFO:root:PassingDataObject: nmdc:4fd183dade7dbaae399428daffb39763 +INFO:root:PassingDataObject: nmdc:80c62ece72a1abad5f0accfbae97a10f +INFO:root:PassingDataObject: nmdc:1bad181cf58b3c8cc5701980db3dccb5 +INFO:root:PassingDataObject: nmdc:eb2911113fb323de07ee1ab61703cfab +INFO:root:PassingDataObject: nmdc:78a2fd68b9524f26c8b84562b873a271 +INFO:root:PassingDataObject: nmdc:c34d79269433c487027fbe2c53cc05a9 +INFO:root:PassingDataObject: nmdc:0ba498c353d26f7688c3a281ad460b68 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452674 +INFO:root:found 2 records +INFO:root:record: nmdc:6105530113a6a0eb9640fa8d0a13cfa0, Assembly Activity for nmdc:mga04djc33 +INFO:root:PassingDataObject: nmdc:d2f61370d318cf09bb58b74d572441f1 +INFO:root:PassingDataObject: nmdc:947ae4da454e454556beee531e425080 +INFO:root:PassingDataObject: nmdc:dcb9421692ec3dc12507fafc2c73bd6e +INFO:root:PassingDataObject: nmdc:fe49eaeab93e5910691a5e36c83d7140 +INFO:root:PassingDataObject: nmdc:1a31132b49b41049f1e49d9665c50eda +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:d16144d105493e156a97132b64038655, Assembly Activity for nmdc:mga0gyew09 +INFO:root:PassingDataObject: nmdc:a37c025f2486f723a4b5a8529685d7e0 +INFO:root:PassingDataObject: nmdc:47eda521a46a079bf9ff95cbb6005e95 +INFO:root:PassingDataObject: nmdc:b36fc4531ec0317e24d01cfa7a81ca39 +INFO:root:PassingDataObject: nmdc:5b0eab0619ff9352e936c329634a1273 +INFO:root:PassingDataObject: nmdc:2cedee72f9ce3a77a392c5eb0b434887 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452674 +INFO:root:found 2 records +INFO:root:record: nmdc:d16144d105493e156a97132b64038655, Annotation Activity for nmdc:mga0gyew09 +INFO:root:PassingDataObject: nmdc:35098bde53782ac7daac8f223c38f209 +INFO:root:PassingDataObject: nmdc:8f2ab21139af7f7d4dbff010be97038e +INFO:root:PassingDataObject: nmdc:042c1a90bb0b34efece6a1e4b5164f3f +INFO:root:PassingDataObject: nmdc:dbdede8a950e7e0fb27045b44dc85baf +INFO:root:PassingDataObject: nmdc:601e1a60fce75e9076ae21b70e5a50a5 +INFO:root:PassingDataObject: nmdc:e202fddebf1f3e7e968fcc8a912124e0 +INFO:root:PassingDataObject: nmdc:a74fe0af0080579f6787afd7e5cb8f7c +INFO:root:PassingDataObject: nmdc:b01f28f6d54d48f85016ef703590a8ec +INFO:root:PassingDataObject: nmdc:3a4750161ee4a91ca4211d297cf7895f +INFO:root:PassingDataObject: nmdc:0f432de321b11a9df8ad89b8e99bdad6 +INFO:root:PassingDataObject: nmdc:a14fd1935105e514de901d68f9cb1681 +INFO:root:PassingDataObject: nmdc:7953d1bd4381155e27681a23d288b106 +INFO:root:PassingDataObject: nmdc:20d22900f1a6f4acb271d3be4a367bf7 +INFO:root:PassingDataObject: nmdc:3f6ad55b4297ad4643495709f0f210e6 +INFO:root:PassingDataObject: nmdc:435bd425b9527f30bf4457903c170da1 +INFO:root:PassingDataObject: nmdc:d558465a9ee3342bf475b8b42c5f5575 +INFO:root:PassingDataObject: nmdc:ce658071878ffdda9ffd3dee0eaf00d1 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:d16144d105493e156a97132b64038655 +ERROR:root:FailedDataObject: nmdc:11e030fce693d99ddd460f0c62d3c091, +ERROR:root:FailedDataObject: nmdc:82298a4694524a4fce5e6d742fb93375, +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d16144d105493e156a97132b64038655, Annotation Activity for nmdc:mga0gyew09 +INFO:root:record: nmdc:6105530113a6a0eb9640fa8d0a13cfa0, Annotation Activity for nmdc:mga04djc33 +INFO:root:PassingDataObject: nmdc:4075d756e43947dcdcb0e3674c25edd7 +INFO:root:PassingDataObject: nmdc:78c0e0bd0ee2d93b1a3c266ff3ad73a4 +INFO:root:PassingDataObject: nmdc:0ccc4208e648a311b0a9ffd0fb2773da +INFO:root:PassingDataObject: nmdc:406f89a6ea1aba3e2dbe5c36a90fe0e6 +INFO:root:PassingDataObject: nmdc:426a7e432e1ee4e4114b097c56d69c0d +INFO:root:PassingDataObject: nmdc:bd116bc27ea6b2f69a3a12cb0ced780a +INFO:root:PassingDataObject: nmdc:90b73a9b99e6e558459e1294f64abc2f +INFO:root:PassingDataObject: nmdc:a5edafe0d77f8309cf7b381b98982c7e +INFO:root:PassingDataObject: nmdc:f099864b511c64258a6b593bcf78337f +INFO:root:PassingDataObject: nmdc:6f5a3eccb69cc04413a2fdffe0451929 +INFO:root:PassingDataObject: nmdc:781236ae67379c0e871cb9b0551eb90b +INFO:root:PassingDataObject: nmdc:82bd1062722bd1498c2e1750284d794c +INFO:root:PassingDataObject: nmdc:24c899cc4432812cb535119c0512fd77 +INFO:root:PassingDataObject: nmdc:84ba7e7c055bbefcc066a01cca97e4ab +INFO:root:PassingDataObject: nmdc:6009e4ce94cd4162a152e02e09db86ab +INFO:root:PassingDataObject: nmdc:a5b4a5223a7b05d19856f7df86947ae7 +INFO:root:PassingDataObject: nmdc:a50d7083668b1f7173eba645b568f8ab +INFO:root:PassingDataObject: nmdc:7d9ca3620f2d166d41c7901938106731 +INFO:root:PassingDataObject: nmdc:dff16d3d54c4cdd83f6f9f37a3e9d555 +INFO:root:PassingDataObject: nmdc:d8da4c2cecbc9d2d4273171a349c3f70 +INFO:root:PassingDataObject: nmdc:fbfab4dcffa5bdce74ad17dff3a2305a +INFO:root:PassingDataObject: nmdc:adbf2ead81752870589020b3a46e9252 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452674 +INFO:root:found 2 records +INFO:root:record: nmdc:6105530113a6a0eb9640fa8d0a13cfa0, MAGs Analysis Activity for nmdc:mga04djc33 +INFO:root:PassingDataObject: nmdc:39f7dea31e252fe12524e3e47291e120 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:6105530113a6a0eb9640fa8d0a13cfa0 +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:6105530113a6a0eb9640fa8d0a13cfa0, MAGs Analysis Activity for nmdc:mga04djc33 +INFO:root:record: nmdc:d16144d105493e156a97132b64038655, MAGs Analysis Activity for nmdc:mga0gyew09 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:d16144d105493e156a97132b64038655 +ERROR:root:FailedDataObject: nmdc:91a4e7da3c8fbdc71ddadd79b06e1f86, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d16144d105493e156a97132b64038655, MAGs Analysis Activity for nmdc:mga0gyew09 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452674 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-zr6p9y23 +INFO:root:legacy_id: gold:Gp0452666 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zr6p9y23 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:b859a0a1bc47e8791d46a2c1f880bdad +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:bf51206466348a697e9b7aeaa34745f4 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452666 +INFO:root:found 2 records +INFO:root:record: nmdc:855c29efad3c6dfeecbebb5a3828aa3f, Read QC Activity for nmdc:mga05j0s93 +INFO:root:PassingDataObject: nmdc:30b57b37f1dee0d230bac1957275e7cf +INFO:root:PassingDataObject: nmdc:46b70715c85ad936f0939ae31d6684be +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:06d72fb37620e3700e5b71fb6d41c41d, Read QC Activity for nmdc:mga0np0190 +INFO:root:PassingDataObject: nmdc:b0a6bef84b4142246f131369d4d95283 +INFO:root:PassingDataObject: nmdc:b57a7232abc790c81cfe9568c56a2af3 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452666 +INFO:root:found 2 records +INFO:root:record: nmdc:855c29efad3c6dfeecbebb5a3828aa3f, ReadBased Analysis Activity for nmdc:mga05j0s93 +INFO:root:PassingDataObject: nmdc:a8cfe9b371d4cd68655e1ffa6f203ce2 +INFO:root:PassingDataObject: nmdc:5bd20b9cd17c3fc22ec26058f8d664cd +INFO:root:PassingDataObject: nmdc:a125789a7525f8f0b9b3e91b15bdbd78 +INFO:root:PassingDataObject: nmdc:8270739a76657164bddfb23137c57e50 +INFO:root:PassingDataObject: nmdc:196be2a65e4f93a80016c0ba1f33da29 +INFO:root:PassingDataObject: nmdc:4dfc712e2b75d15e5cb652fc2a5db67a +INFO:root:PassingDataObject: nmdc:5d957ff1f4f5b653595e538ee75d9140 +INFO:root:PassingDataObject: nmdc:a23d15e3d9ee6c6476d4f499f516623a +INFO:root:PassingDataObject: nmdc:7494124724254afd8efac7c99e634149 +INFO:root:passing_data_objects: 9 +INFO:root:record: nmdc:06d72fb37620e3700e5b71fb6d41c41d, ReadBased Analysis Activity for nmdc:mga0np0190 +INFO:root:PassingDataObject: nmdc:0ccb282330b59b538ccf9979696225b0 +INFO:root:PassingDataObject: nmdc:44ab319a9bd5e6f28c426d0a2b34c18f +INFO:root:PassingDataObject: nmdc:a5037c4742997b89c46a90f728c9dbeb +INFO:root:PassingDataObject: nmdc:f7992ef6b6eadcbf594792457d3ec9f0 +INFO:root:PassingDataObject: nmdc:def32bb9957912c76366916b444ea92d +INFO:root:PassingDataObject: nmdc:07d57d215bd0350dace8ade28ad1960e +INFO:root:PassingDataObject: nmdc:80eaf53642482c2f1247ee35f255f11d +INFO:root:PassingDataObject: nmdc:d8266545ba7094363e348935266510c8 +INFO:root:PassingDataObject: nmdc:47248c291f63f7cc7eda85f9290a2610 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 2 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452666 +INFO:root:found 2 records +INFO:root:record: nmdc:06d72fb37620e3700e5b71fb6d41c41d, Assembly Activity for nmdc:mga0np0190 +INFO:root:PassingDataObject: nmdc:f9efe8dc7aebdffc5cf816b4e0b72251 +INFO:root:PassingDataObject: nmdc:13b0b1b1915965fca0fdd710431fb47c +INFO:root:PassingDataObject: nmdc:a10cf439887480f052ea92383d3b8dea +INFO:root:PassingDataObject: nmdc:6dbf01e34646b012dd48c0572909e237 +INFO:root:PassingDataObject: nmdc:6cfee1c67ffb2f40d15bc71a6dd3ed2f +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:855c29efad3c6dfeecbebb5a3828aa3f, Assembly Activity for nmdc:mga05j0s93 +INFO:root:PassingDataObject: nmdc:be7293d2b50004909132f1162d5aab69 +INFO:root:PassingDataObject: nmdc:93e17e5a8bbf1cfc0b50b046533d5191 +INFO:root:PassingDataObject: nmdc:90990b63b6d91dea786806975a7734ac +INFO:root:PassingDataObject: nmdc:f18e73659b69e7e88f726c4ec759be4f +INFO:root:PassingDataObject: nmdc:6af9bb9153c9055c056be63b0edd7dcf +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452666 +INFO:root:found 2 records +INFO:root:record: nmdc:855c29efad3c6dfeecbebb5a3828aa3f, Annotation Activity for nmdc:mga05j0s93 +INFO:root:PassingDataObject: nmdc:766327bbb0c16dee8c5ab61146c07885 +INFO:root:PassingDataObject: nmdc:bd5aedfcd14fc921ea8d1fcf8ab24573 +INFO:root:PassingDataObject: nmdc:f7602cdf3c8eb0435d619c6284dc38d0 +INFO:root:PassingDataObject: nmdc:c66f03b30f0322de0b904db4592ad401 +INFO:root:PassingDataObject: nmdc:17c979dc83a2dea12d87b880c22b12b6 +INFO:root:PassingDataObject: nmdc:9beae52852fc15670eec2209a801f629 +INFO:root:PassingDataObject: nmdc:b2b590e77859dd5fdf46cc06863072f2 +INFO:root:PassingDataObject: nmdc:73de1f565a2d5423cc52c784deeef525 +INFO:root:PassingDataObject: nmdc:efb2075cea72e255d7f80e9207779992 +INFO:root:PassingDataObject: nmdc:6d3217aae4e1308b33a6c992a82bf9e5 +INFO:root:PassingDataObject: nmdc:9be2d2ff1e77d6c7318f8ec5b4102bb6 +INFO:root:PassingDataObject: nmdc:8b102859c3eddfa52e67a58820e125e4 +INFO:root:PassingDataObject: nmdc:06970cbd014ad6d3e745566dd6379866 +INFO:root:PassingDataObject: nmdc:f9957dc6b774733f39da52b48a1abd4e +INFO:root:PassingDataObject: nmdc:31111f08176583cee4c81c51697d969e +INFO:root:PassingDataObject: nmdc:129f80e61511b303d49c10153bff7f2b +INFO:root:PassingDataObject: nmdc:2cc404d2d2fb783164d433aa83e9b667 +INFO:root:PassingDataObject: nmdc:3c9d3862d80cb9952a20892f217dbf5b +INFO:root:PassingDataObject: nmdc:2ca0ca8b80fdeb94c2b04fd4c0883580 +INFO:root:PassingDataObject: nmdc:69357d632a4ea51d40e96dff5db1044d +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:855c29efad3c6dfeecbebb5a3828aa3f +ERROR:root:failing_data_objects: 20 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:855c29efad3c6dfeecbebb5a3828aa3f, Annotation Activity for nmdc:mga05j0s93 +INFO:root:record: nmdc:06d72fb37620e3700e5b71fb6d41c41d, Annotation Activity for nmdc:mga0np0190 +INFO:root:PassingDataObject: nmdc:f9868cdf2f9f5c7aebcf901a6782d8e8 +INFO:root:PassingDataObject: nmdc:a7fa7c537a3aa359daa54d31ff77ccbe +INFO:root:PassingDataObject: nmdc:708696efebbe342d89e34b188178b438 +INFO:root:PassingDataObject: nmdc:b85e795d425532044b84c09ea615012a +INFO:root:PassingDataObject: nmdc:f26106a2a41aef6cf8a0406d8d0011cf +INFO:root:PassingDataObject: nmdc:945087aa7c0f6339ed5e81fcb65cbb43 +INFO:root:PassingDataObject: nmdc:197cb9355fb4b93e240a3b83252f1d0a +INFO:root:PassingDataObject: nmdc:24908b17be9dceb2fa7d0a41a648ed02 +INFO:root:PassingDataObject: nmdc:6f04ad1a39e8b72ce81cbec5e1cdbb5c +INFO:root:PassingDataObject: nmdc:ef07c45411aaccc41c59b76f08852cc0 +INFO:root:PassingDataObject: nmdc:20df70764b9787094b860c692aadca73 +INFO:root:PassingDataObject: nmdc:b8aa4efaa648bd94d778b26c8767dd20 +INFO:root:PassingDataObject: nmdc:602c05010d990aa7d15bfc7292920544 +INFO:root:PassingDataObject: nmdc:737c554b51dd1cbb71e414f79294255b +INFO:root:PassingDataObject: nmdc:48e3b8e7b589958cb0969f57e17a4c46 +INFO:root:PassingDataObject: nmdc:820ea87861aea22e5892f10e0d0cca14 +INFO:root:PassingDataObject: nmdc:e93208248bdf83c4947e972f6672cb4f +INFO:root:PassingDataObject: nmdc:5869315992f754a48a5b1a4052a7a55c +INFO:root:PassingDataObject: nmdc:0fce3d1875645973bfe928c15adfe01d +INFO:root:PassingDataObject: nmdc:4cd0fd7fd766abd88e4e7a0ed5e44222 +INFO:root:PassingDataObject: nmdc:0096f87df582ee009e1b68076ae40ef8 +INFO:root:PassingDataObject: nmdc:6ba09746914da2e048a678571664406e +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452666 +INFO:root:found 2 records +INFO:root:record: nmdc:855c29efad3c6dfeecbebb5a3828aa3f, MAGs Analysis Activity for nmdc:mga05j0s93 +INFO:root:PassingDataObject: nmdc:6f8ba630cd7d9059cdf178b048fc4d0c +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:855c29efad3c6dfeecbebb5a3828aa3f +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:855c29efad3c6dfeecbebb5a3828aa3f, MAGs Analysis Activity for nmdc:mga05j0s93 +INFO:root:record: nmdc:06d72fb37620e3700e5b71fb6d41c41d, MAGs Analysis Activity for nmdc:mga0np0190 +INFO:root:PassingDataObject: nmdc:f914fc73346efe41d9f79a2a491cc076 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:06d72fb37620e3700e5b71fb6d41c41d +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:06d72fb37620e3700e5b71fb6d41c41d, MAGs Analysis Activity for nmdc:mga0np0190 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452666 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-amsezt94 +INFO:root:legacy_id: gold:Gp0452693 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-amsezt94 +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:d41f165befc18b2ce4875fdfc61d201a +INFO:root:Adding OmicsProcessing None has_output DataObject:nmdc:8d1f9d467d3e136acb9d91807a59c291 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0452693 +INFO:root:found 2 records +INFO:root:record: nmdc:0aa6b925bd69a062f3378ab9dd1b849c, Read QC Activity for nmdc:mga0txra96 +INFO:root:PassingDataObject: nmdc:24372c7d58500cd1c5f53b1adc7660bd +INFO:root:PassingDataObject: nmdc:8bf9a2a4bf70ba3f82343404f31721ad +INFO:root:passing_data_objects: 2 +INFO:root:record: nmdc:3509b24340cc6523c6f202ad54e3d8c8, Read QC Activity for nmdc:mga0v1h344 +INFO:root:PassingDataObject: nmdc:f6cd1172ea04899d4138e021904de45f +INFO:root:PassingDataObject: nmdc:7e66151897c12a376f8b15ef7919211b +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 2 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0452693 +INFO:root:found 2 records +INFO:root:record: nmdc:0aa6b925bd69a062f3378ab9dd1b849c, ReadBased Analysis Activity for nmdc:mga0txra96 +INFO:root:PassingDataObject: nmdc:86f330778720dbb8a5d7d116e58d4a9c +INFO:root:PassingDataObject: nmdc:63c7420867cee068d7639003566cc16f +INFO:root:PassingDataObject: nmdc:a4205698879f5e4d0f34bbcae1e93112 +INFO:root:PassingDataObject: nmdc:4043876e6bbb759e26d0bed6479ddfd2 +ERROR:root:DataObjectNotFound nmdc:dc2e21becda8d6b010a95897cf97ae90 for nmdc:ReadBasedAnalysisActivity/nmdc:0aa6b925bd69a062f3378ab9dd1b849c +ERROR:root:DataObjectNotFound nmdc:425873a08e598b0ca2987ff7b9b5da1f for nmdc:ReadBasedAnalysisActivity/nmdc:0aa6b925bd69a062f3378ab9dd1b849c +ERROR:root:FailedDataObject: nmdc:7f32b00efc514886fc9e482fd82de49b, +ERROR:root:FailedDataObject: nmdc:8e575b499baa54c85dd36052225bf33b, +ERROR:root:FailedDataObject: nmdc:26b4d8993e2cdc4a297c1aecd19c81bf, +ERROR:root:failing_data_objects: 7 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0aa6b925bd69a062f3378ab9dd1b849c, ReadBased Analysis Activity for nmdc:mga0txra96 +INFO:root:record: nmdc:3509b24340cc6523c6f202ad54e3d8c8, ReadBased Analysis Activity for nmdc:mga0v1h344 +INFO:root:PassingDataObject: nmdc:52c6a6f42841210dc879ddccfde964e5 +INFO:root:PassingDataObject: nmdc:5c48f5e6e9b182fca953cd76f8a2c405 +INFO:root:PassingDataObject: nmdc:9d66b444af8028dc9efc0e09fbf7ad91 +INFO:root:PassingDataObject: nmdc:fea336f0c85e7f453ca97c1268ef340d +INFO:root:PassingDataObject: nmdc:91ade16d4286a2d81ac4fbebcbc93a7c +INFO:root:PassingDataObject: nmdc:f4a8d15a38798ba76a4f2b10d74fcbb7 +INFO:root:PassingDataObject: nmdc:fbc415851732349e0f660edbba57af3c +INFO:root:PassingDataObject: nmdc:9956242c40e6c6842c6e0a2e86687cdd +INFO:root:PassingDataObject: nmdc:ee31a9282e5448f9498a5d3344b0c791 +INFO:root:passing_data_objects: 9 +ERROR:root:FailedRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0452693 +INFO:root:found 2 records +INFO:root:record: nmdc:0aa6b925bd69a062f3378ab9dd1b849c, Assembly Activity for nmdc:mga0txra96 +INFO:root:PassingDataObject: nmdc:3bad54eacf6a46b348c29d961c1979f2 +INFO:root:PassingDataObject: nmdc:2a520f144263e372357bdef2bfbe050c +INFO:root:PassingDataObject: nmdc:af95f242b47f7c76bf524263ee37a46f +INFO:root:PassingDataObject: nmdc:e53d024e18aca812a553d1f8450e8c97 +INFO:root:PassingDataObject: nmdc:4c4c6f53f867bb35ec7f37974c8bd1b9 +INFO:root:passing_data_objects: 5 +INFO:root:record: nmdc:3509b24340cc6523c6f202ad54e3d8c8, Assembly Activity for nmdc:mga0v1h344 +INFO:root:PassingDataObject: nmdc:ca87a5b68734d57af76ae5b39cfb3368 +INFO:root:PassingDataObject: nmdc:47232fb06792210ce60a93b2e233c353 +INFO:root:PassingDataObject: nmdc:d1ffe997d7cd42f1ac8309af495201a0 +INFO:root:PassingDataObject: nmdc:bc1b46d899d2e172cd80ed4e004906cd +INFO:root:PassingDataObject: nmdc:a4354d65dd7ac89ab5eaa5b10f3e5cfb +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 2 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0452693 +INFO:root:found 2 records +INFO:root:record: nmdc:0aa6b925bd69a062f3378ab9dd1b849c, Annotation Activity for nmdc:mga0txra96 +INFO:root:PassingDataObject: nmdc:74884a47ce49769b4d45cc11e3c6fcd5 +INFO:root:PassingDataObject: nmdc:a86a9517248c91001f9026c7edf8a671 +INFO:root:PassingDataObject: nmdc:6abc19516d2ea73eb72adcc56975df5e +INFO:root:PassingDataObject: nmdc:8c02d1fa56cbd403d58e5819afdf874a +INFO:root:PassingDataObject: nmdc:7e93b710e98101f57783851d649d56e5 +INFO:root:PassingDataObject: nmdc:ef6a7d807e0e89217196f41b3675d8be +INFO:root:PassingDataObject: nmdc:431aeee0150a342a9b6e2a74bb1c46c8 +INFO:root:PassingDataObject: nmdc:3d8924a35588701b342d861d4d17f81e +INFO:root:PassingDataObject: nmdc:b1497c23bfca75c188346ab1f175c948 +INFO:root:PassingDataObject: nmdc:bde7b3fa80be967eaa775280d109d43c +INFO:root:PassingDataObject: nmdc:143a840637b784c55cc38859b56a00fe +INFO:root:PassingDataObject: nmdc:ed8e5c6dd2ea70fa294b5b9e45d1f61e +INFO:root:PassingDataObject: nmdc:ba291cf62c6189e64fa47f83b9363b89 +INFO:root:PassingDataObject: nmdc:a2fe4b12d9a726de0f278305b10e835c +INFO:root:PassingDataObject: nmdc:6874ba1457dda6ba956c0cdded2765e8 +INFO:root:PassingDataObject: nmdc:c6fdc08b1fd3d8406384987698c3997d +INFO:root:PassingDataObject: nmdc:1a782c4b6aad175762b31f52c31cabf8 +INFO:root:PassingDataObject: nmdc:7ab10441a0cea6fb8774f0f4a19e1af2 +INFO:root:PassingDataObject: nmdc:6aefdb27baa13e0961c5e9e168cd6ba3 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MetagenomeAnnotationActivity/nmdc:0aa6b925bd69a062f3378ab9dd1b849c +ERROR:root:failing_data_objects: 19 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0aa6b925bd69a062f3378ab9dd1b849c, Annotation Activity for nmdc:mga0txra96 +INFO:root:record: nmdc:3509b24340cc6523c6f202ad54e3d8c8, Annotation Activity for nmdc:mga0v1h344 +INFO:root:PassingDataObject: nmdc:e7ace14aacdfcd8702439320b6564097 +INFO:root:PassingDataObject: nmdc:9936d9ac4c3bb2069de54bfbc654ccdd +INFO:root:PassingDataObject: nmdc:79b6fb5e025c04adad9b3a0f1b1cd67b +INFO:root:PassingDataObject: nmdc:fdba5004fc6447910dab1f09e91229de +INFO:root:PassingDataObject: nmdc:925dc9a7b772814aaebec7018ab3632e +INFO:root:PassingDataObject: nmdc:ffd136502315af0ad106be6a045c8a78 +INFO:root:PassingDataObject: nmdc:873af0d1a414cbb6699c2fa4225ed60e +INFO:root:PassingDataObject: nmdc:fdca9bd8dc59c649c34bdeb397b3c50b +INFO:root:PassingDataObject: nmdc:1e69de0b9468caba0d0ed6389ac8b5ed +INFO:root:PassingDataObject: nmdc:a6fc8c2b440f9447879e81f7116348aa +INFO:root:PassingDataObject: nmdc:58da6275cbff031fce9929f9a21b28cf +INFO:root:PassingDataObject: nmdc:51a3e6de4971c82bb87ceb87704e5c3c +INFO:root:PassingDataObject: nmdc:eeea8db0317da11fcd6a90e121611305 +INFO:root:PassingDataObject: nmdc:575d41f200c932995fdf6fe51b67dff9 +INFO:root:PassingDataObject: nmdc:6bf5c7a0797585a52587547a1ec0f15a +INFO:root:PassingDataObject: nmdc:81ff45d733d799467f56f8a5682401d4 +INFO:root:PassingDataObject: nmdc:cd892d24a4bc198c399957bcb7dcd688 +INFO:root:PassingDataObject: nmdc:8dea874a728ceb65a8530b7128565ca9 +INFO:root:PassingDataObject: nmdc:658f19763cf841299c2eb29d0c6b74e4 +INFO:root:PassingDataObject: nmdc:615d8d2efdb3c5745b76904440206ec2 +INFO:root:PassingDataObject: nmdc:8de10a1c03a6f8bda8cd2e2b18a88386 +INFO:root:PassingDataObject: nmdc:508f982ae511f93b1b89c0b5d3780f75 +INFO:root:passing_data_objects: 22 +ERROR:root:FailedRecords: metagenome_annotation_activity_set, 1 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0452693 +INFO:root:found 2 records +INFO:root:record: nmdc:0aa6b925bd69a062f3378ab9dd1b849c, MAGs Analysis Activity for nmdc:mga0txra96 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0aa6b925bd69a062f3378ab9dd1b849c +ERROR:root:FailedDataObject: nmdc:249726267e85bf34c6fc5b6ec1e7f6c9, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0aa6b925bd69a062f3378ab9dd1b849c, MAGs Analysis Activity for nmdc:mga0txra96 +INFO:root:record: nmdc:3509b24340cc6523c6f202ad54e3d8c8, MAGs Analysis Activity for nmdc:mga0v1h344 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:3509b24340cc6523c6f202ad54e3d8c8 +ERROR:root:FailedDataObject: nmdc:7b08a0d67bd4ea8f5c8a8c08da40359e, +ERROR:root:failing_data_objects: 1 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:3509b24340cc6523c6f202ad54e3d8c8, MAGs Analysis Activity for nmdc:mga0v1h344 +ERROR:root:FailedRecords: mags_activity_set, 2 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0452693 +INFO:root:found 0 records +INFO:root:Writing 79 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-547rwq94_associated_record_dump.json +INFO:root:Elapsed time: 796.159441947937 +INFO:root:Writing 76 failed records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-547rwq94_failed_record_dump.json +INFO:root:Found 1 omics processing records with missing has_output +INFO:root:Found 0 read qc records with missing data objects diff --git a/nmdc_automation/re_iding/scripts/nmdc:sty-11-547rwq94_process_records.log b/nmdc_automation/re_iding/scripts/nmdc:sty-11-547rwq94_process_records.log new file mode 100644 index 00000000..054fd008 --- /dev/null +++ b/nmdc_automation/re_iding/scripts/nmdc:sty-11-547rwq94_process_records.log @@ -0,0 +1,13615 @@ +/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/urllib3/__init__.py:34: NotOpenSSLWarning: urllib3 v2 only supports OpenSSL 1.1.1+, currently the 'ssl' module is compiled with 'LibreSSL 2.8.3'. See: https://github.com/urllib3/urllib3/issues/3020 + warnings.warn( +INFO:root:Processing workflow records for study_id: nmdc:sty-11-547rwq94 +INFO:root:Using data_dir: /global/cfs/cdirs/m3408/results +INFO:root:Using db_infile: /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-547rwq94_associated_record_dump.json +INFO:root:Read 79 records from db_infile +INFO:root:omics_processing_id: nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f6b1d66ed59a7eeb111f3940c4c2870 nmdc:dobj-11-vjvymp77 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e08bd88c7df264282772667984b1f18 nmdc:dobj-11-5n76yf14 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94924d86576c5c258fcf959ba6a312f9 nmdc:dobj-11-fxrpt722 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-b4hr7x49 +INFO:root:New activity id created for nmdc:omprc-11-b4hr7x49 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-94z0kh73.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-94z0kh73.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8eff093598ad1cca7f4729afcbaeb648 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-94z0kh73.1/nmdc_wfrqc-11-94z0kh73.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8eff093598ad1cca7f4729afcbaeb648 nmdc:dobj-11-m3xg4s37 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-94z0kh73.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9cf7a7e296a49bfdc1c923da679ed774 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-94z0kh73.1/nmdc_wfrqc-11-94z0kh73.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9cf7a7e296a49bfdc1c923da679ed774 nmdc:dobj-11-wdp76092 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-94z0kh73.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:f62650f0d7c4c8b9a4a852a478c8f8c5 nmdc:wfrqc-11-94z0kh73.1 +INFO:root:New activity id created for nmdc:omprc-11-b4hr7x49 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8da2cf95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-8da2cf95.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2bf234c4b1e1bebb57bb024a98263707 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-8da2cf95.1/nmdc_wfrqc-11-8da2cf95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2bf234c4b1e1bebb57bb024a98263707 nmdc:dobj-11-agx7cm60 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8da2cf95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d29cdebdd92ce85b6dcf32d913e495db +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-8da2cf95.1/nmdc_wfrqc-11-8da2cf95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d29cdebdd92ce85b6dcf32d913e495db nmdc:dobj-11-jbv7wv85 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8da2cf95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a5bcd8fd394b6c81c87b7729848efac1 nmdc:wfrqc-11-8da2cf95.1 +INFO:root:New activity id created for nmdc:omprc-11-b4hr7x49 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-yk1hcz65.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-yk1hcz65.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84f3256226d69e856d6bd15f80ae300d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-yk1hcz65.1/nmdc_wfrqc-11-yk1hcz65.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:84f3256226d69e856d6bd15f80ae300d nmdc:dobj-11-4zpqrp88 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-yk1hcz65.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c6b9d150c549544c1534d195f07d1ae +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrqc-11-yk1hcz65.1/nmdc_wfrqc-11-yk1hcz65.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c6b9d150c549544c1534d195f07d1ae nmdc:dobj-11-e387wk76 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-yk1hcz65.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:097a88676de66bd72ee2d18ee150ebae nmdc:wfrqc-11-yk1hcz65.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-b4hr7x49 +INFO:root:New activity id created for nmdc:omprc-11-b4hr7x49 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-cpgrk843.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-cpgrk843.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ca1ab1d22c66d61ad6a96d546be3fedb +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-cpgrk843.1/nmdc_wfmgas-11-cpgrk843.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca1ab1d22c66d61ad6a96d546be3fedb nmdc:dobj-11-sa529d81 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cpgrk843.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ee7cc7a603455f889af143db03a7065 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-cpgrk843.1/nmdc_wfmgas-11-cpgrk843.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ee7cc7a603455f889af143db03a7065 nmdc:dobj-11-cavvdp28 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cpgrk843.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fc5314742b9ddd1f8cf26189d64cdaec +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-cpgrk843.1/nmdc_wfmgas-11-cpgrk843.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc5314742b9ddd1f8cf26189d64cdaec nmdc:dobj-11-h2yfhd11 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cpgrk843.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a501251320cba5223b7bc62127cff06 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-cpgrk843.1/nmdc_wfmgas-11-cpgrk843.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a501251320cba5223b7bc62127cff06 nmdc:dobj-11-j8f9ms38 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cpgrk843.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a924b2073ba6182bbe49f96a504ac621 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-cpgrk843.1/nmdc_wfmgas-11-cpgrk843.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a924b2073ba6182bbe49f96a504ac621 nmdc:dobj-11-h41zxg88 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cpgrk843.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a5bcd8fd394b6c81c87b7729848efac1 nmdc:wfmgas-11-cpgrk843.1 +INFO:root:New activity id created for nmdc:omprc-11-b4hr7x49 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-gjttny97.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-gjttny97.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b16cfb81b30d822773dbd08038d4bef +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-gjttny97.1/nmdc_wfmgas-11-gjttny97.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b16cfb81b30d822773dbd08038d4bef nmdc:dobj-11-1kz0w106 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gjttny97.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff84d15af101b138efeef313ccd8c4a8 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-gjttny97.1/nmdc_wfmgas-11-gjttny97.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff84d15af101b138efeef313ccd8c4a8 nmdc:dobj-11-bprr3d50 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gjttny97.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:811ee579e6a0feedb6bd87606ec75e02 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfmgas-11-gjttny97.1/nmdc_wfmgas-11-gjttny97.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:811ee579e6a0feedb6bd87606ec75e02 nmdc:dobj-11-b1wz6910 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d79c303c1ab9f33bdc0d559398110484 nmdc:dobj-11-2b522927 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcsg3j85.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:436dc84ca5cb6f2a474d2d8d894a103e +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-qcsg3j85.1/nmdc_wfrbt-11-qcsg3j85.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:436dc84ca5cb6f2a474d2d8d894a103e nmdc:dobj-11-xkbjg049 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcsg3j85.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f79808edc0651d86078128ce3a82392a +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-qcsg3j85.1/nmdc_wfrbt-11-qcsg3j85.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f79808edc0651d86078128ce3a82392a nmdc:dobj-11-t1vns257 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qcsg3j85.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f62650f0d7c4c8b9a4a852a478c8f8c5 nmdc:wfrbt-11-qcsg3j85.1 +INFO:root:New activity id created for nmdc:omprc-11-b4hr7x49 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-sp5cf618.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:17e5468ee599f08b2caa277f1ea2eb9f +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:17e5468ee599f08b2caa277f1ea2eb9f nmdc:dobj-11-vk92gy06 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f2a975c8aa991fcfd537af3c5b29785 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f2a975c8aa991fcfd537af3c5b29785 nmdc:dobj-11-m0ra0088 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d2f1bd2ce0e20657cc0fa2c3a78e0338 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2f1bd2ce0e20657cc0fa2c3a78e0338 nmdc:dobj-11-pyz47d05 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0102de5715f4669843c9ce95d7582402 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0102de5715f4669843c9ce95d7582402 nmdc:dobj-11-fyevkn60 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:676a61b282f7668a22bf73ce4071d0ad +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:676a61b282f7668a22bf73ce4071d0ad nmdc:dobj-11-j3tq1935 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b749cd27e23f077f79f9628b35e6049c +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b749cd27e23f077f79f9628b35e6049c nmdc:dobj-11-6y61st91 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e4e7a0eff6d32ad3a4f789b18006480 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e4e7a0eff6d32ad3a4f789b18006480 nmdc:dobj-11-pmrcay15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e499fed8219e8cd0e52888b5c3386b96 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e499fed8219e8cd0e52888b5c3386b96 nmdc:dobj-11-j6gvtm46 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c133477e2b2c5924f958fb2c932ddbe5 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b4hr7x49/nmdc:wfrbt-11-sp5cf618.1/nmdc_wfrbt-11-sp5cf618.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c133477e2b2c5924f958fb2c932ddbe5 nmdc:dobj-11-hjmc2p15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-b4hr7x49 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sp5cf618.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:097a88676de66bd72ee2d18ee150ebae nmdc:wfrbt-11-sp5cf618.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-b4hr7x49 +INFO:root:omics_processing_id: nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47ccf15b0bff588636b8a488f343f457 nmdc:dobj-11-d42cq716 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b78b0f864bfbd495ea9a4c245536406 nmdc:dobj-11-2h45zj60 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baf245903ec64b7441f3ecaac848c69c nmdc:dobj-11-vt22x284 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-w9r3hd19 +INFO:root:New activity id created for nmdc:omprc-11-w9r3hd19 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zjje2v40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-zjje2v40.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cb2f1b165f4bc09903f3f49921e5eba +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-zjje2v40.1/nmdc_wfrqc-11-zjje2v40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cb2f1b165f4bc09903f3f49921e5eba nmdc:dobj-11-dvehtf98 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zjje2v40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d7591cc54b5a75f6ef8c01681cda321 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-zjje2v40.1/nmdc_wfrqc-11-zjje2v40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d7591cc54b5a75f6ef8c01681cda321 nmdc:dobj-11-f4v42r80 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zjje2v40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:35ecc186fb465626c68b0599078fdb14 nmdc:wfrqc-11-zjje2v40.1 +INFO:root:New activity id created for nmdc:omprc-11-w9r3hd19 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-b9arh066.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-b9arh066.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac14a73bd1dade1a9acef81b397d15c2 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-b9arh066.1/nmdc_wfrqc-11-b9arh066.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac14a73bd1dade1a9acef81b397d15c2 nmdc:dobj-11-r3j73z33 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b9arh066.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:64aee15ebf0653218d0cea0ab4123553 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-b9arh066.1/nmdc_wfrqc-11-b9arh066.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64aee15ebf0653218d0cea0ab4123553 nmdc:dobj-11-jgmz8834 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b9arh066.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:45999ff56bd45c7f4594c8ce4cc3e4dc nmdc:wfrqc-11-b9arh066.1 +INFO:root:New activity id created for nmdc:omprc-11-w9r3hd19 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-abmtt346.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-abmtt346.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fa4cb8f515eb5f3367dac6c8008bace +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-abmtt346.1/nmdc_wfrqc-11-abmtt346.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fa4cb8f515eb5f3367dac6c8008bace nmdc:dobj-11-kcxjk896 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-abmtt346.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b931575b87b1723082a7fe78e2e07dc +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrqc-11-abmtt346.1/nmdc_wfrqc-11-abmtt346.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b931575b87b1723082a7fe78e2e07dc nmdc:dobj-11-ttsx5m69 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-abmtt346.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:916a83fca0e0855024dc5bd1efb06a01 nmdc:wfrqc-11-abmtt346.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-w9r3hd19 +INFO:root:New activity id created for nmdc:omprc-11-w9r3hd19 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-a6hhqf35.1 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nmdc:a88930fba1e877ea37ca0647dd51cb72 nmdc:dobj-11-sypyme88 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc5a0016.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a19f2d02f60af5f91814b35a62327dd +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-nc5a0016.1/nmdc_wfrbt-11-nc5a0016.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a19f2d02f60af5f91814b35a62327dd nmdc:dobj-11-jg265d87 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc5a0016.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:35ecc186fb465626c68b0599078fdb14 nmdc:wfrbt-11-nc5a0016.1 +INFO:root:New activity id 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-stdcwb85.1/nmdc_wfrbt-11-stdcwb85.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f692a3168c80ab4ee51f6103d03f1ebc nmdc:dobj-11-6kcgbk33 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-stdcwb85.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:731bb99733b25b67f52bf0c6d22081b1 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-stdcwb85.1/nmdc_wfrbt-11-stdcwb85.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:731bb99733b25b67f52bf0c6d22081b1 nmdc:dobj-11-a5f04w22 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-stdcwb85.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c28530fa17dfe848786204abc1979fd9 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-stdcwb85.1/nmdc_wfrbt-11-stdcwb85.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c28530fa17dfe848786204abc1979fd9 nmdc:dobj-11-0gf36431 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-stdcwb85.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86d5926f1bb3a432b661e1848908018a +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-stdcwb85.1/nmdc_wfrbt-11-stdcwb85.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86d5926f1bb3a432b661e1848908018a nmdc:dobj-11-z4704v28 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-stdcwb85.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eac90b26d0fed0a39fa12a3b4026d43e +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-stdcwb85.1/nmdc_wfrbt-11-stdcwb85.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eac90b26d0fed0a39fa12a3b4026d43e nmdc:dobj-11-580xyy76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-stdcwb85.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e559ff708c43b2e2e337b83b11881f6 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-stdcwb85.1/nmdc_wfrbt-11-stdcwb85.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e559ff708c43b2e2e337b83b11881f6 nmdc:dobj-11-64ejsm98 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-stdcwb85.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a884ba7b5d8705ebc2fe19c7d103705 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-stdcwb85.1/nmdc_wfrbt-11-stdcwb85.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a884ba7b5d8705ebc2fe19c7d103705 nmdc:dobj-11-whrkc712 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-stdcwb85.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad58f0a9081267ac0ab688c6d9eb0650 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-stdcwb85.1/nmdc_wfrbt-11-stdcwb85.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad58f0a9081267ac0ab688c6d9eb0650 nmdc:dobj-11-m0sd9p84 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-stdcwb85.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:916a83fca0e0855024dc5bd1efb06a01 nmdc:wfrbt-11-stdcwb85.1 +INFO:root:New activity id created for nmdc:omprc-11-w9r3hd19 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ybcwf184.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61f87390cbaec8b0fc8f3399e8cc85e9 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61f87390cbaec8b0fc8f3399e8cc85e9 nmdc:dobj-11-3411se16 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3439c90c73fb82c46121bed003726efe +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3439c90c73fb82c46121bed003726efe nmdc:dobj-11-0h5svt35 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebf7726a105896124b1975f71c2d46b5 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebf7726a105896124b1975f71c2d46b5 nmdc:dobj-11-e2dxgt65 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3964dd07d21e2d6a73e54e42640a802 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3964dd07d21e2d6a73e54e42640a802 nmdc:dobj-11-qhzwdy95 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:895483cb0c2cd77790cc4b2eed78383b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:895483cb0c2cd77790cc4b2eed78383b nmdc:dobj-11-w3y4kf91 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:28ecff2ad7e6dee8bb024286cc8e0cd7 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28ecff2ad7e6dee8bb024286cc8e0cd7 nmdc:dobj-11-wcfxd734 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b4a02f74befb3bd362f22e72a857358 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b4a02f74befb3bd362f22e72a857358 nmdc:dobj-11-zfy7qd96 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a052f90aa39beb5a9b2ff59c27047f4 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a052f90aa39beb5a9b2ff59c27047f4 nmdc:dobj-11-w2htpg14 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cd9ed447db9c578b3a5d88a59a49d41 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9r3hd19/nmdc:wfrbt-11-ybcwf184.1/nmdc_wfrbt-11-ybcwf184.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cd9ed447db9c578b3a5d88a59a49d41 nmdc:dobj-11-7wrt7f77 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-w9r3hd19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ybcwf184.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:45999ff56bd45c7f4594c8ce4cc3e4dc nmdc:wfrbt-11-ybcwf184.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-w9r3hd19 +INFO:root:omics_processing_id: nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64f288a541b1c9eb56d8e83aef6f381e nmdc:dobj-11-16ds7h96 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90d1d613541efa15d23eaff2e6a30889 nmdc:dobj-11-y45mmq97 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-00wrjs90 +INFO:root:New activity id created for nmdc:omprc-11-00wrjs90 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-d145q751.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfrqc-11-d145q751.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b50061675e419bb8a238dddc961d592 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfrqc-11-d145q751.1/nmdc_wfrqc-11-d145q751.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b50061675e419bb8a238dddc961d592 nmdc:dobj-11-em59fk47 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d145q751.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:310f71c19f74c4683e8e109ea33ac129 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfrqc-11-d145q751.1/nmdc_wfrqc-11-d145q751.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:310f71c19f74c4683e8e109ea33ac129 nmdc:dobj-11-y8qenp33 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d145q751.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:23f566e73d1e6095cfe49ff57bb2ad4c nmdc:wfrqc-11-d145q751.1 +INFO:root:New activity id created for nmdc:omprc-11-00wrjs90 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3qrsws05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfrqc-11-3qrsws05.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7bd4b5fc04f6e9002792dac03acc4b66 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfrqc-11-3qrsws05.1/nmdc_wfrqc-11-3qrsws05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bd4b5fc04f6e9002792dac03acc4b66 nmdc:dobj-11-aw4qzv71 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3qrsws05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f6a49b146382fb80928974d4ac3c3f12 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfrqc-11-3qrsws05.1/nmdc_wfrqc-11-3qrsws05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f6a49b146382fb80928974d4ac3c3f12 nmdc:dobj-11-4fk8nr16 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3qrsws05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:53741f195cd67218562374f91e88052c nmdc:wfrqc-11-3qrsws05.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-00wrjs90 +INFO:root:New activity id created for nmdc:omprc-11-00wrjs90 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4kvfee41.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-4kvfee41.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdd19765d189faf12d137a4b5469f00f +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-4kvfee41.1/nmdc_wfmgas-11-4kvfee41.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdd19765d189faf12d137a4b5469f00f nmdc:dobj-11-jrfj1z98 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4kvfee41.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42e962292ac1fce1e343e1bf657e0b7a +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-4kvfee41.1/nmdc_wfmgas-11-4kvfee41.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42e962292ac1fce1e343e1bf657e0b7a nmdc:dobj-11-9s2c3973 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4kvfee41.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:726129680a778216ff6458142075edbe +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-4kvfee41.1/nmdc_wfmgas-11-4kvfee41.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:726129680a778216ff6458142075edbe nmdc:dobj-11-7ep9fw34 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4kvfee41.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:70f6d661ab1d5ee2eef22c7e9ef7f40a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-4kvfee41.1/nmdc_wfmgas-11-4kvfee41.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:70f6d661ab1d5ee2eef22c7e9ef7f40a nmdc:dobj-11-cqe8ym59 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4kvfee41.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:859b94a3fb3ecfad0e4af357853caa52 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-4kvfee41.1/nmdc_wfmgas-11-4kvfee41.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:859b94a3fb3ecfad0e4af357853caa52 nmdc:dobj-11-b7p2hw59 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4kvfee41.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:23f566e73d1e6095cfe49ff57bb2ad4c nmdc:wfmgas-11-4kvfee41.1 +INFO:root:New activity id created for nmdc:omprc-11-00wrjs90 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-3qmgph04.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-3qmgph04.1 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scaffold fasta for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3qmgph04.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78722a645c2dde136cf27598db0778c8 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-3qmgph04.1/nmdc_wfmgas-11-3qmgph04.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78722a645c2dde136cf27598db0778c8 nmdc:dobj-11-v01xqf56 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-3qmgph04.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8dda1008bbb58646fd3b953ad123cf84 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-00wrjs90/nmdc:wfmgas-11-3qmgph04.1/nmdc_wfmgas-11-3qmgph04.1_assembly.agp 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nmdc:wfmgas-11-3qmgph04.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-00wrjs90 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-00wrjs90 +INFO:root:omics_processing_id: nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9a31bbde1ce4d47cdc4cda5fc5c280d nmdc:dobj-11-90k1e739 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:54c78acb9faacb00de8baa3d2d29d1f5 nmdc:dobj-11-t42cws45 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b14e76f800960f57ccf14a0e382d7d0 nmdc:dobj-11-ycyp1544 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6854aa2fb0f776422001f9ba4df7931 nmdc:dobj-11-j53cr880 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-3xc6vt92 +INFO:root:New activity id created for nmdc:omprc-11-3xc6vt92 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ff6qyd96.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-ff6qyd96.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9dfba8da94f2b90cd12d17c3c9ff250f +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-ff6qyd96.1/nmdc_wfrqc-11-ff6qyd96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9dfba8da94f2b90cd12d17c3c9ff250f nmdc:dobj-11-wne2p730 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ff6qyd96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e135c311ae86a76bad01f03d35dd40e5 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-ff6qyd96.1/nmdc_wfrqc-11-ff6qyd96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e135c311ae86a76bad01f03d35dd40e5 nmdc:dobj-11-cb8j0592 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ff6qyd96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:93f47f83d0f0bb91cb33c02150ca7239 nmdc:wfrqc-11-ff6qyd96.1 +INFO:root:New activity id created for nmdc:omprc-11-3xc6vt92 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-79jam902.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-79jam902.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:815bb124c55c2691ca0370eec56c72c9 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-79jam902.1/nmdc_wfrqc-11-79jam902.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:815bb124c55c2691ca0370eec56c72c9 nmdc:dobj-11-dtc20v48 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-79jam902.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c58137bcfa697625d12287d6d62c387b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-79jam902.1/nmdc_wfrqc-11-79jam902.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c58137bcfa697625d12287d6d62c387b nmdc:dobj-11-15w57432 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-79jam902.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:445d5d6b38895ce163c69ede7a1dbcc9 nmdc:wfrqc-11-79jam902.1 +INFO:root:New activity id created for nmdc:omprc-11-3xc6vt92 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-z3t3cj39.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-z3t3cj39.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c97a0e8e5c36db23debdd52c8137bb70 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-z3t3cj39.1/nmdc_wfrqc-11-z3t3cj39.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c97a0e8e5c36db23debdd52c8137bb70 nmdc:dobj-11-q0gjf236 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z3t3cj39.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:97734f7ddd779314eab46a3bb20b1c52 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-z3t3cj39.1/nmdc_wfrqc-11-z3t3cj39.1_filterStats.txt 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nmdc:f7db34463e9197f1a02298a6a2cb19fe nmdc:dobj-11-myc91130 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d8xrrp93.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:11d80cbbf9ea84b4ba52b2c684ea47ed +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrqc-11-d8xrrp93.1/nmdc_wfrqc-11-d8xrrp93.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:11d80cbbf9ea84b4ba52b2c684ea47ed nmdc:dobj-11-5c48qk59 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d8xrrp93.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:66d71934a44d6a30fac861162d9204be nmdc:wfrqc-11-d8xrrp93.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set 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nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kn5arq88.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:262d21e366e3325ffd8635d0555942af +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-kn5arq88.1/nmdc_wfrbt-11-kn5arq88.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:262d21e366e3325ffd8635d0555942af nmdc:dobj-11-qajxhj76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kn5arq88.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e10242a05a38355a7d4f79bbbea80a9a +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-kn5arq88.1/nmdc_wfrbt-11-kn5arq88.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e10242a05a38355a7d4f79bbbea80a9a nmdc:dobj-11-2d40ms37 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kn5arq88.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7de8f9c8db0912bb198f0da4968e2e58 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-kn5arq88.1/nmdc_wfrbt-11-kn5arq88.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7de8f9c8db0912bb198f0da4968e2e58 nmdc:dobj-11-ygw0mw80 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kn5arq88.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d495163bacb75247a71b85201745ff3a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-kn5arq88.1/nmdc_wfrbt-11-kn5arq88.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d495163bacb75247a71b85201745ff3a nmdc:dobj-11-206nnm97 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kn5arq88.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13b84d14aa128262a78e91957a60416c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-kn5arq88.1/nmdc_wfrbt-11-kn5arq88.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13b84d14aa128262a78e91957a60416c nmdc:dobj-11-q5krmw33 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-kn5arq88.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:66d71934a44d6a30fac861162d9204be nmdc:wfrbt-11-kn5arq88.1 +INFO:root:New activity id created for nmdc:omprc-11-3xc6vt92 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-rwqpmg07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:633e527c4e7da012fbfb4834dbc02152 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:633e527c4e7da012fbfb4834dbc02152 nmdc:dobj-11-tz4d3234 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c3bf24c59948a25763b097c948f3d16 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c3bf24c59948a25763b097c948f3d16 nmdc:dobj-11-038pzf02 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53d6905b05b9f0e7a054ab32d297ec68 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53d6905b05b9f0e7a054ab32d297ec68 nmdc:dobj-11-eevzdd26 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b8de986223c5b2b22b3d5b061793dbe7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b8de986223c5b2b22b3d5b061793dbe7 nmdc:dobj-11-2rg7ff57 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e0311a248d89c0af548acac24787d5c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e0311a248d89c0af548acac24787d5c nmdc:dobj-11-xh9baf90 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:351b65c578204cbea0efb63bcca499e4 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:351b65c578204cbea0efb63bcca499e4 nmdc:dobj-11-0nc61076 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e1899f20dbf8017d78a65f10e7ffbd21 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e1899f20dbf8017d78a65f10e7ffbd21 nmdc:dobj-11-j3zdqn68 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ec3a8e67846d3c0ecdabfc736f269c1 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ec3a8e67846d3c0ecdabfc736f269c1 nmdc:dobj-11-mgvp8m03 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c268c5b2c100728f49b232f18ce65ee8 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3xc6vt92/nmdc:wfrbt-11-rwqpmg07.1/nmdc_wfrbt-11-rwqpmg07.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c268c5b2c100728f49b232f18ce65ee8 nmdc:dobj-11-j34spb90 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3xc6vt92 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rwqpmg07.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:29fdd0fb4c501e6d363bf42f4483159c nmdc:wfrbt-11-rwqpmg07.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-3xc6vt92 +INFO:root:omics_processing_id: nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:300679ea9c6c797128bf9ec0ce4b9dbb nmdc:dobj-11-a323wp76 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-tk58tf31 +INFO:root:New activity id created for nmdc:omprc-11-tk58tf31 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-58qf6f18.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrqc-11-58qf6f18.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:611f15bbbecb10f9d403c0fda33ad586 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrqc-11-58qf6f18.1/nmdc_wfrqc-11-58qf6f18.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:611f15bbbecb10f9d403c0fda33ad586 nmdc:dobj-11-3m1avm97 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-58qf6f18.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2340045e00b9520168f34aada96862dc +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrqc-11-58qf6f18.1/nmdc_wfrqc-11-58qf6f18.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2340045e00b9520168f34aada96862dc nmdc:dobj-11-anb12b84 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-58qf6f18.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:faadcef69ec3b36ff6663e5728b488a2 nmdc:wfrqc-11-58qf6f18.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-tk58tf31 +INFO:root:New activity id created for nmdc:omprc-11-tk58tf31 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wjbz9w95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfmgas-11-wjbz9w95.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bee6a4c634bb81034586142ba2a3245c +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfmgas-11-wjbz9w95.1/nmdc_wfmgas-11-wjbz9w95.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bee6a4c634bb81034586142ba2a3245c nmdc:dobj-11-czcp8c63 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wjbz9w95.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b6111b1925ec73d39c0e98cbe706d94f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfmgas-11-wjbz9w95.1/nmdc_wfmgas-11-wjbz9w95.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6111b1925ec73d39c0e98cbe706d94f nmdc:dobj-11-z1hgfz66 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wjbz9w95.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5606e0e2cc098740eea9f3a4bd4d27b8 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfmgas-11-wjbz9w95.1/nmdc_wfmgas-11-wjbz9w95.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5606e0e2cc098740eea9f3a4bd4d27b8 nmdc:dobj-11-8x6q6k51 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfmgas-11-wjbz9w95.1/nmdc_wfmgas-11-wjbz9w95.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfbb7441b59591e7aaad58b6050ad442 nmdc:dobj-11-xaagsy12 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wjbz9w95.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:faadcef69ec3b36ff6663e5728b488a2 nmdc:wfmgas-11-wjbz9w95.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-tk58tf31 +INFO:root:New activity id created for nmdc:omprc-11-tk58tf31 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-am3r8e15.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrbt-11-am3r8e15.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a4d2ca949b7fee03281b9b7403470b8d +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrbt-11-am3r8e15.1/nmdc_wfrbt-11-am3r8e15.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4d2ca949b7fee03281b9b7403470b8d nmdc:dobj-11-krdd7k72 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-am3r8e15.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f4acdc20a91aa1c97331dcfcd0f2cb15 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrbt-11-am3r8e15.1/nmdc_wfrbt-11-am3r8e15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f4acdc20a91aa1c97331dcfcd0f2cb15 nmdc:dobj-11-wbn5mb88 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-am3r8e15.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d7ca3ffc4c631a0ac1f386c946adc00 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrbt-11-am3r8e15.1/nmdc_wfrbt-11-am3r8e15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d7ca3ffc4c631a0ac1f386c946adc00 nmdc:dobj-11-f8gh9y13 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-am3r8e15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:142d2e029f5a3409f691fff5d6079e42 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrbt-11-am3r8e15.1/nmdc_wfrbt-11-am3r8e15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:142d2e029f5a3409f691fff5d6079e42 nmdc:dobj-11-wee18z38 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-am3r8e15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16383216ecee71ba4698f75e0aac2f4c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrbt-11-am3r8e15.1/nmdc_wfrbt-11-am3r8e15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16383216ecee71ba4698f75e0aac2f4c nmdc:dobj-11-phgfjf77 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-tk58tf31 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+INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tk58tf31/nmdc:wfrbt-11-am3r8e15.1/nmdc_wfrbt-11-am3r8e15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22cd3a24372c4bcc010d0abb06305815 nmdc:dobj-11-eqmgwk70 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-tk58tf31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-am3r8e15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:faadcef69ec3b36ff6663e5728b488a2 nmdc:wfrbt-11-am3r8e15.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-tk58tf31 +INFO:root:omics_processing_id: nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f18fc28bca76ca35a5609dfc0f9ee0d nmdc:dobj-11-ayqzn418 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f117d55288f1df32049555de45c5385 nmdc:dobj-11-grprpp25 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc24572d356fe77fdab701ea18913606 nmdc:dobj-11-0g9tnt04 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-etmn8d77 +INFO:root:New activity id created for nmdc:omprc-11-etmn8d77 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5k0ay524.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrqc-11-5k0ay524.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:457e8c96ab308ffaf3472424e04b4d80 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrqc-11-5k0ay524.1/nmdc_wfrqc-11-5k0ay524.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:457e8c96ab308ffaf3472424e04b4d80 nmdc:dobj-11-7t9k2y96 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-etmn8d77 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrqc-11-jnpgac47.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7a5e1e529ebe1d41c9ccc84e6873a6ad +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrqc-11-jnpgac47.1/nmdc_wfrqc-11-jnpgac47.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7a5e1e529ebe1d41c9ccc84e6873a6ad nmdc:dobj-11-tb7zsq24 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jnpgac47.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e8c81de8ea76c577a9d83344e09d47f7 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrqc-11-jnpgac47.1/nmdc_wfrqc-11-jnpgac47.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8c81de8ea76c577a9d83344e09d47f7 nmdc:dobj-11-r7hxcn68 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-jnpgac47.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:63ebe0376f136f357c76e8452e4cb288 nmdc:wfrqc-11-jnpgac47.1 +INFO:root:New activity id created for nmdc:omprc-11-etmn8d77 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-c474af84.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrqc-11-c474af84.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73a599c900af364ca7a95e8c2c2eeb72 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrqc-11-c474af84.1/nmdc_wfrqc-11-c474af84.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73a599c900af364ca7a95e8c2c2eeb72 nmdc:dobj-11-jx5aw205 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created for nmdc:omprc-11-etmn8d77 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xbzhgt96.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfmgas-11-xbzhgt96.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f2be07c14f7972077a959823b051e1af +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfmgas-11-xbzhgt96.1/nmdc_wfmgas-11-xbzhgt96.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2be07c14f7972077a959823b051e1af nmdc:dobj-11-ddkdgx52 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xbzhgt96.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a3e365f322fa2defe4eb29e347c9981 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfmgas-11-xbzhgt96.1/nmdc_wfmgas-11-xbzhgt96.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a3e365f322fa2defe4eb29e347c9981 nmdc:dobj-11-nvqzd433 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xbzhgt96.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:833ef6731e94a267bc546b120b05fd86 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfmgas-11-xbzhgt96.1/nmdc_wfmgas-11-xbzhgt96.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:833ef6731e94a267bc546b120b05fd86 nmdc:dobj-11-yrbpg578 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xbzhgt96.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb7a5036f8f0b75a9b96f893f84fe41f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfmgas-11-xbzhgt96.1/nmdc_wfmgas-11-xbzhgt96.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb7a5036f8f0b75a9b96f893f84fe41f nmdc:dobj-11-devjnm76 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xbzhgt96.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36d47ce84123c42497196f4d4833f494 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfmgas-11-xbzhgt96.1/nmdc_wfmgas-11-xbzhgt96.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36d47ce84123c42497196f4d4833f494 nmdc:dobj-11-2fzach49 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nmdc_wfrbt-11-xq2b0y34.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b295847a6bf9d816a1a3e863ab795e37 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrbt-11-xq2b0y34.1/nmdc_wfrbt-11-xq2b0y34.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b295847a6bf9d816a1a3e863ab795e37 nmdc:dobj-11-00rkzg45 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xq2b0y34.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e35064ceba321f09132fad1ecfd84cb +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrbt-11-xq2b0y34.1/nmdc_wfrbt-11-xq2b0y34.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e35064ceba321f09132fad1ecfd84cb nmdc:dobj-11-fksa9e28 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xq2b0y34.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c30eaef4e19045f17160159181f9e8b5 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-etmn8d77/nmdc:wfrbt-11-xq2b0y34.1/nmdc_wfrbt-11-xq2b0y34.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c30eaef4e19045f17160159181f9e8b5 nmdc:dobj-11-gsf3qg43 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-etmn8d77 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xq2b0y34.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f0577ccc61b232c3ae1fc4623c54811c nmdc:wfrbt-11-xq2b0y34.1 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nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xypvnt78.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a99912bbc24fd6c29a1a1b28da85147a +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-xypvnt78.1/nmdc_wfrbt-11-xypvnt78.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a99912bbc24fd6c29a1a1b28da85147a nmdc:dobj-11-39ap1h81 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xypvnt78.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43c1b291fd5701c6b2d10ac0b35b86e8 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-xypvnt78.1/nmdc_wfrbt-11-xypvnt78.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43c1b291fd5701c6b2d10ac0b35b86e8 nmdc:dobj-11-jxzmcy77 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xypvnt78.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b9e4b9172ca6db5b2035797dba61058 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-xypvnt78.1/nmdc_wfrbt-11-xypvnt78.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b9e4b9172ca6db5b2035797dba61058 nmdc:dobj-11-szy2qv55 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xypvnt78.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b677a5a059e0214ef53ad6d743aabf0d +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-xypvnt78.1/nmdc_wfrbt-11-xypvnt78.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b677a5a059e0214ef53ad6d743aabf0d nmdc:dobj-11-79p1bq73 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xypvnt78.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7defebccddd43ac16bf8622f81cb7b73 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-xypvnt78.1/nmdc_wfrbt-11-xypvnt78.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7defebccddd43ac16bf8622f81cb7b73 nmdc:dobj-11-dtthhq52 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-xypvnt78.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:afeeec813929cbe40c84e372b2bd55f7 nmdc:wfrbt-11-xypvnt78.1 +INFO:root:New activity id created for nmdc:omprc-11-t5fy6291 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ehzsw341.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5112cf30b71cde173f1f5f5e10f7491 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5112cf30b71cde173f1f5f5e10f7491 nmdc:dobj-11-k838vz32 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7302f73c7d6950346c1728c38b481dc +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7302f73c7d6950346c1728c38b481dc nmdc:dobj-11-p4katt94 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7bd18575c4f7884711d3f5ea888898d2 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bd18575c4f7884711d3f5ea888898d2 nmdc:dobj-11-67f1x588 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e69e70191332d744832e83f3a8685a0 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e69e70191332d744832e83f3a8685a0 nmdc:dobj-11-6cmvy534 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:68ab52e2aae5d9b54b74f342318af9fd +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68ab52e2aae5d9b54b74f342318af9fd nmdc:dobj-11-5bqaps81 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db61fa5b9eef747f4233f62c33d71bf6 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db61fa5b9eef747f4233f62c33d71bf6 nmdc:dobj-11-jvagqb83 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1366ad5e228fad68bf3bd54a5d50082e +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1366ad5e228fad68bf3bd54a5d50082e nmdc:dobj-11-c19aw113 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f72d0799a8b556b25ca041804681f874 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f72d0799a8b556b25ca041804681f874 nmdc:dobj-11-1rbk0971 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c19ca15bfdb56c68dab4e684774b624 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-ehzsw341.1/nmdc_wfrbt-11-ehzsw341.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c19ca15bfdb56c68dab4e684774b624 nmdc:dobj-11-w42dvg18 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ehzsw341.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:45babdf91fa207caf000f8b4c0059056 nmdc:wfrbt-11-ehzsw341.1 +INFO:root:New activity id created for nmdc:omprc-11-t5fy6291 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8j67pz08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b12a37ebefa4b7c201e442bc67edea67 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b12a37ebefa4b7c201e442bc67edea67 nmdc:dobj-11-yzj02z19 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3a5b6741581f9fdf4cbda9409734479b +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a5b6741581f9fdf4cbda9409734479b nmdc:dobj-11-qgkjnb83 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cf083e9a0d1ede6d40e282405a470c75 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf083e9a0d1ede6d40e282405a470c75 nmdc:dobj-11-jqy79w09 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9917d6c484925c16f73ead276070363b +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9917d6c484925c16f73ead276070363b nmdc:dobj-11-hrz5s075 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9b6ea811c64cd3801878129c531b3e6 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9b6ea811c64cd3801878129c531b3e6 nmdc:dobj-11-427gcz22 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:babc07bfc532f87386257d6e47626987 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:babc07bfc532f87386257d6e47626987 nmdc:dobj-11-x5h0yp94 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:76f2c3c5dc2047d1e95452b57a9a5f60 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:76f2c3c5dc2047d1e95452b57a9a5f60 nmdc:dobj-11-7r84qf52 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:432057f22e325eaeeb567774842aa910 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:432057f22e325eaeeb567774842aa910 nmdc:dobj-11-7npcq193 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34966b1cef6208747a17384af9f2a500 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t5fy6291/nmdc:wfrbt-11-8j67pz08.1/nmdc_wfrbt-11-8j67pz08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34966b1cef6208747a17384af9f2a500 nmdc:dobj-11-xzhrdd16 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t5fy6291 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8j67pz08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a1d5b08d7a7d0f4821ae0bfff3c3bbaa nmdc:wfrbt-11-8j67pz08.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-t5fy6291 +INFO:root:omics_processing_id: nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d58b7394566de1ba629529c1d7545fa5 nmdc:dobj-11-4m0kc964 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-kphcv369 +INFO:root:New activity id created for nmdc:omprc-11-kphcv369 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-tx80wh44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrqc-11-tx80wh44.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40b0499260d9198c813a816dd3e40f1a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrqc-11-tx80wh44.1/nmdc_wfrqc-11-tx80wh44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40b0499260d9198c813a816dd3e40f1a nmdc:dobj-11-3axdg479 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tx80wh44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79f16f46c836c25380e6d400b98e9858 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrqc-11-tx80wh44.1/nmdc_wfrqc-11-tx80wh44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79f16f46c836c25380e6d400b98e9858 nmdc:dobj-11-a0tgwn02 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tx80wh44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8 nmdc:wfrqc-11-tx80wh44.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-kphcv369 +INFO:root:New activity id created for nmdc:omprc-11-kphcv369 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bvytc105.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfmgas-11-bvytc105.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d192d785a0254deea3627e0230347e9 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfmgas-11-bvytc105.1/nmdc_wfmgas-11-bvytc105.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d192d785a0254deea3627e0230347e9 nmdc:dobj-11-ytd3yw69 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bvytc105.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23eff1840ec4b84c6a91e731b4bf057e +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfmgas-11-bvytc105.1/nmdc_wfmgas-11-bvytc105.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23eff1840ec4b84c6a91e731b4bf057e nmdc:dobj-11-c6p3wy23 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bvytc105.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d1dda6b21de6729072117a2ea0eb93f4 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfmgas-11-bvytc105.1/nmdc_wfmgas-11-bvytc105.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1dda6b21de6729072117a2ea0eb93f4 nmdc:dobj-11-jn9txa78 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bvytc105.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d1112a308ed9f800905343e6be1dac06 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfmgas-11-bvytc105.1/nmdc_wfmgas-11-bvytc105.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1112a308ed9f800905343e6be1dac06 nmdc:dobj-11-q313ws91 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bvytc105.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ed451b729e11addde2f6c8c1d642c694 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfmgas-11-bvytc105.1/nmdc_wfmgas-11-bvytc105.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed451b729e11addde2f6c8c1d642c694 nmdc:dobj-11-nf3q4d41 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bvytc105.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8 nmdc:wfmgas-11-bvytc105.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-kphcv369 +INFO:root:New activity id created for nmdc:omprc-11-kphcv369 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-j9hwba93.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f4749d52a2c06534691a41fd7e0b146 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f4749d52a2c06534691a41fd7e0b146 nmdc:dobj-11-e6k99039 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:942e612f4daf7505edb6cb3327c7f0b4 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:942e612f4daf7505edb6cb3327c7f0b4 nmdc:dobj-11-h9nszg15 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f94c42b84a8d0c5b6bcb08158a34945 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f94c42b84a8d0c5b6bcb08158a34945 nmdc:dobj-11-g4e8a465 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a26774068f497dd87f83f9592fca33c5 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a26774068f497dd87f83f9592fca33c5 nmdc:dobj-11-hpgn1953 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1da4a661f1b4c22b4a22bb00dca5b075 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1da4a661f1b4c22b4a22bb00dca5b075 nmdc:dobj-11-kjw82e64 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a588822c169d60000d582fe9ee6cab55 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a588822c169d60000d582fe9ee6cab55 nmdc:dobj-11-k3e56595 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89d6e1165eba1c33f7a319e0481e6aea +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89d6e1165eba1c33f7a319e0481e6aea nmdc:dobj-11-k53wtq70 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8afef4bbf55f3be55ca1553d6b65e269 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8afef4bbf55f3be55ca1553d6b65e269 nmdc:dobj-11-1a8ayb91 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ddae2df48a77bfb96e9e195cd631b22f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-kphcv369/nmdc:wfrbt-11-j9hwba93.1/nmdc_wfrbt-11-j9hwba93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ddae2df48a77bfb96e9e195cd631b22f nmdc:dobj-11-q4kbhv23 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-kphcv369 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j9hwba93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fd6256c18ba1e63e6631f5b62c7ca6c8 nmdc:wfrbt-11-j9hwba93.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-kphcv369 +INFO:root:omics_processing_id: nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1b5fe57f2b143861c39cb24570e7768 nmdc:dobj-11-3e9vy662 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66c8ff5150fe7589a4f44c32ee85b6b2 nmdc:dobj-11-m0qd5x48 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:463bdac334608a92dd1d271af228b414 nmdc:dobj-11-fdccv043 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-x3dfq162 +INFO:root:New activity id created for nmdc:omprc-11-x3dfq162 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4txp0s06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrqc-11-4txp0s06.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72be943990e8a805cecf307c6dc978f9 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrqc-11-4txp0s06.1/nmdc_wfrqc-11-4txp0s06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72be943990e8a805cecf307c6dc978f9 nmdc:dobj-11-7a0ych08 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4txp0s06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94f45b373f14afe1f22ba29b4e568ca9 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrqc-11-4txp0s06.1/nmdc_wfrqc-11-4txp0s06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94f45b373f14afe1f22ba29b4e568ca9 nmdc:dobj-11-bjz4q889 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4txp0s06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:030d27b0b825c231aeea9bdd8b2b3f50 nmdc:wfrqc-11-4txp0s06.1 +INFO:root:New activity id created for nmdc:omprc-11-x3dfq162 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ex24ye78.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrqc-11-ex24ye78.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d40dc907041fdf212314b01d02b4a003 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrqc-11-ex24ye78.1/nmdc_wfrqc-11-ex24ye78.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d40dc907041fdf212314b01d02b4a003 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for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sbmnfw84.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02b01950d135a3915a4d648f7214d9e2 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-sbmnfw84.1/nmdc_wfrbt-11-sbmnfw84.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02b01950d135a3915a4d648f7214d9e2 nmdc:dobj-11-tw58pw20 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sbmnfw84.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d4065a2bb934351e3e875137748d6bf6 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-sbmnfw84.1/nmdc_wfrbt-11-sbmnfw84.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4065a2bb934351e3e875137748d6bf6 nmdc:dobj-11-kj2vz115 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sbmnfw84.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21b5e97529a2fdcf341c4cf38f69b3f3 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-sbmnfw84.1/nmdc_wfrbt-11-sbmnfw84.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21b5e97529a2fdcf341c4cf38f69b3f3 nmdc:dobj-11-vkk0tb64 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sbmnfw84.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a041a71ae5539540ff4e2c6b77a7087 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-sbmnfw84.1/nmdc_wfrbt-11-sbmnfw84.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a041a71ae5539540ff4e2c6b77a7087 nmdc:dobj-11-62h7v588 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-sbmnfw84.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6ff9c447edb9ab7ac019057063dd2002 nmdc:wfrbt-11-sbmnfw84.1 +INFO:root:New activity id created for nmdc:omprc-11-x3dfq162 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-g30w8850.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:070c7ea26581495fb3f3561a71b1bf5a +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:070c7ea26581495fb3f3561a71b1bf5a nmdc:dobj-11-etw5n631 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c9a38067266b7f59648b9c993a15e8b +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c9a38067266b7f59648b9c993a15e8b nmdc:dobj-11-9km71h94 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f335c4221d817a322a0200241f99fe80 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f335c4221d817a322a0200241f99fe80 nmdc:dobj-11-wha2vs31 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa810c1148588e93778a250e09f86ac5 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa810c1148588e93778a250e09f86ac5 nmdc:dobj-11-ys320k94 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fe46e479ccea4c18cf50249fb7405714 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fe46e479ccea4c18cf50249fb7405714 nmdc:dobj-11-6ddsb637 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ba90e7d79a95a1f6706004ad88947547 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ba90e7d79a95a1f6706004ad88947547 nmdc:dobj-11-qkds9r72 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6a5484fdc53b72226a5ae5a884b304f9 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6a5484fdc53b72226a5ae5a884b304f9 nmdc:dobj-11-c7mx7g71 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6499e6073520ea0908de4309613dbb4 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6499e6073520ea0908de4309613dbb4 nmdc:dobj-11-s4rtd862 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ac0c37816dcd1c17a818e13c60e2bb0 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x3dfq162/nmdc:wfrbt-11-g30w8850.1/nmdc_wfrbt-11-g30w8850.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ac0c37816dcd1c17a818e13c60e2bb0 nmdc:dobj-11-n9st8s43 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-x3dfq162 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g30w8850.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:57c981b1d9e2a7a7fee4181f7275a959 nmdc:wfrbt-11-g30w8850.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-x3dfq162 +INFO:root:omics_processing_id: nmdc:omprc-11-5bq15a15 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f4d81dc979c76aa85c945731b860fe06 nmdc:dobj-11-tgqj5j86 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5bq15a15 +INFO:root:New activity id created for nmdc:omprc-11-5bq15a15 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cb1fht57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5bq15a15/nmdc:wfrqc-11-cb1fht57.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6def84d06d5fa4d1afb3d64f4e78ea66 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5bq15a15/nmdc:wfrqc-11-cb1fht57.1/nmdc_wfrqc-11-cb1fht57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6def84d06d5fa4d1afb3d64f4e78ea66 nmdc:dobj-11-d30ws170 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5bq15a15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cb1fht57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9658bfdafd93917704b7b47213e6bc2b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5bq15a15/nmdc:wfrqc-11-cb1fht57.1/nmdc_wfrqc-11-cb1fht57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9658bfdafd93917704b7b47213e6bc2b nmdc:dobj-11-m1df0509 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5bq15a15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cb1fht57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4e93c4c6f4cea856e09c70184c1c316a nmdc:wfrqc-11-cb1fht57.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-5bq15a15 +INFO:root:New activity id created for nmdc:omprc-11-5bq15a15 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-je3ahk08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5bq15a15/nmdc:wfmgas-11-je3ahk08.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:34ce19375aed79e26b93d8baddc1f00f +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5bq15a15/nmdc:wfmgas-11-je3ahk08.1/nmdc_wfmgas-11-je3ahk08.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:34ce19375aed79e26b93d8baddc1f00f nmdc:dobj-11-mymybg32 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-5bq15a15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-je3ahk08.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c2c1a711aba3e2a96574617d5ef1936f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5bq15a15/nmdc:wfmgas-11-je3ahk08.1/nmdc_wfmgas-11-je3ahk08.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c2c1a711aba3e2a96574617d5ef1936f nmdc:dobj-11-f65ys850 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-5bq15a15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-je3ahk08.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c59e1ff09af28662ffcbe746903e3b6 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5bq15a15/nmdc:wfmgas-11-je3ahk08.1/nmdc_wfmgas-11-je3ahk08.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c59e1ff09af28662ffcbe746903e3b6 nmdc:dobj-11-sqyy2864 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-5bq15a15 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-je3ahk08.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60ce4eb61fd6d0d113121d11632f351e +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5bq15a15/nmdc:wfmgas-11-je3ahk08.1/nmdc_wfmgas-11-je3ahk08.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60ce4eb61fd6d0d113121d11632f351e nmdc:dobj-11-wjm3fa36 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nmdc:omprc-11-jfr88r66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b1vah777.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e92db7573090872c3f71406e45326f35 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jfr88r66/nmdc:wfrbt-11-b1vah777.1/nmdc_wfrbt-11-b1vah777.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e92db7573090872c3f71406e45326f35 nmdc:dobj-11-q1r19n37 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-jfr88r66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b1vah777.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58058f0451c33729bf3c13ef2ee4eb3a +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jfr88r66/nmdc:wfrbt-11-b1vah777.1/nmdc_wfrbt-11-b1vah777.1_gottcha2_krona.html 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nmdc:e9afe157684329797023ea5553aab13f +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jfr88r66/nmdc:wfrbt-11-b1vah777.1/nmdc_wfrbt-11-b1vah777.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9afe157684329797023ea5553aab13f nmdc:dobj-11-19ah1542 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-jfr88r66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b1vah777.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d16d65e84a625ca655d90288fbe5d68 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jfr88r66/nmdc:wfrbt-11-b1vah777.1/nmdc_wfrbt-11-b1vah777.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d16d65e84a625ca655d90288fbe5d68 nmdc:dobj-11-jdekre57 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-jfr88r66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b1vah777.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:828f7e7777a7b672eedf33c9e0039062 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jfr88r66/nmdc:wfrbt-11-b1vah777.1/nmdc_wfrbt-11-b1vah777.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:828f7e7777a7b672eedf33c9e0039062 nmdc:dobj-11-nntt9h03 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-jfr88r66 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-b1vah777.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e59cae2f597f759705cca1bf064e69ea +INFO:root:New file path computed for Kraken2 Classification Report: 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nmdc_wfrbt-11-b1vah777.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e49fc56b7541422d30be66df159d5b23 nmdc:wfrbt-11-b1vah777.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-jfr88r66 +INFO:root:omics_processing_id: nmdc:omprc-11-c9c08373 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:066c3c3445073cacfe100f368a54fc0a nmdc:dobj-11-x2ye3w89 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-c9c08373 +INFO:root:New activity id created for nmdc:omprc-11-c9c08373 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-j5pq3n40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c9c08373/nmdc:wfrqc-11-j5pq3n40.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:469bc9ded3d59b4e796642971c1f45d7 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c9c08373/nmdc:wfrqc-11-j5pq3n40.1/nmdc_wfrqc-11-j5pq3n40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:469bc9ded3d59b4e796642971c1f45d7 nmdc:dobj-11-fcx07t12 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-c9c08373 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j5pq3n40.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:209780ba9618f18d87f2c9f646ab00f5 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c9c08373/nmdc:wfrqc-11-j5pq3n40.1/nmdc_wfrqc-11-j5pq3n40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:209780ba9618f18d87f2c9f646ab00f5 nmdc:dobj-11-kybgma89 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-c9c08373 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j5pq3n40.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1da21238d9f677c4ef016e183e6370be nmdc:wfrqc-11-j5pq3n40.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-c9c08373 +INFO:root:New activity id created for nmdc:omprc-11-c9c08373 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wj5pw265.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c9c08373/nmdc:wfmgas-11-wj5pw265.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:643c564457387121c53423197b61c308 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c9c08373/nmdc:wfmgas-11-wj5pw265.1/nmdc_wfmgas-11-wj5pw265.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:643c564457387121c53423197b61c308 nmdc:dobj-11-z0d9ac84 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-c9c08373 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wj5pw265.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9ace9c51fbb7dc656e4f59b877bdaf5d +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c9c08373/nmdc:wfmgas-11-wj5pw265.1/nmdc_wfmgas-11-wj5pw265.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9ace9c51fbb7dc656e4f59b877bdaf5d nmdc:dobj-11-mcaw3h32 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-c9c08373 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wj5pw265.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3310966d9469bc6f39e01a6c1eac7417 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c9c08373/nmdc:wfmgas-11-wj5pw265.1/nmdc_wfmgas-11-wj5pw265.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3310966d9469bc6f39e01a6c1eac7417 nmdc:dobj-11-6gf6zt25 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9debj72/nmdc:wfrbt-11-bmhgrg46.1/nmdc_wfrbt-11-bmhgrg46.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8bf00c8de63e66867deb0b9cd9e35de nmdc:dobj-11-2j6ndv35 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-g9debj72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bmhgrg46.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a6c40c66df86d39a64cab61d397351d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9debj72/nmdc:wfrbt-11-bmhgrg46.1/nmdc_wfrbt-11-bmhgrg46.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a6c40c66df86d39a64cab61d397351d nmdc:dobj-11-gg5ze018 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-g9debj72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bmhgrg46.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:158578bf4e23dd875f02568bd3cfa6c2 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9debj72/nmdc:wfrbt-11-bmhgrg46.1/nmdc_wfrbt-11-bmhgrg46.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:158578bf4e23dd875f02568bd3cfa6c2 nmdc:dobj-11-qdn7r414 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-g9debj72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bmhgrg46.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07e95b5941f38bfb7bb19a62c8dfa263 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9debj72/nmdc:wfrbt-11-bmhgrg46.1/nmdc_wfrbt-11-bmhgrg46.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07e95b5941f38bfb7bb19a62c8dfa263 nmdc:dobj-11-wn1pds02 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g9debj72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bmhgrg46.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3285aeede7c7505f5eaf640bf378683 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9debj72/nmdc:wfrbt-11-bmhgrg46.1/nmdc_wfrbt-11-bmhgrg46.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3285aeede7c7505f5eaf640bf378683 nmdc:dobj-11-ny6bvm36 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g9debj72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bmhgrg46.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f113971aad6d5a4240cd91b072bb71f3 nmdc:wfrbt-11-bmhgrg46.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-g9debj72 +INFO:root:omics_processing_id: nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51b1d76881e7c5021686ea96b57f33e9 nmdc:dobj-11-s8s6pp50 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:041bc29a7e81b05f06e392538c6c29b4 nmdc:dobj-11-s2kpjy27 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-91xvx168 +INFO:root:New activity id created for nmdc:omprc-11-91xvx168 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-bb7qxv58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrqc-11-bb7qxv58.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8091256c2fc6d257e3fb16b03f006fa6 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrqc-11-bb7qxv58.1/nmdc_wfrqc-11-bb7qxv58.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8091256c2fc6d257e3fb16b03f006fa6 nmdc:dobj-11-vtk2tn69 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bb7qxv58.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7823250721a0fa2e679c05f8e56c5b3d +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrqc-11-bb7qxv58.1/nmdc_wfrqc-11-bb7qxv58.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7823250721a0fa2e679c05f8e56c5b3d nmdc:dobj-11-3krsrg03 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-bb7qxv58.1_filterStats.txt 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nmdc:3c431df78c016a6220bcff26fc4fca99 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrqc-11-nbnt5m94.1/nmdc_wfrqc-11-nbnt5m94.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c431df78c016a6220bcff26fc4fca99 nmdc:dobj-11-t87dkn84 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-nbnt5m94.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:21d298c0afad3fa6bf5f641ded09b208 nmdc:wfrqc-11-nbnt5m94.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-91xvx168 +INFO:root:New activity id created for nmdc:omprc-11-91xvx168 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-demp8c31.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-demp8c31.1 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scaffold fasta for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-demp8c31.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a4a64ba70ac1bf67cb2074fb80ac519 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-demp8c31.1/nmdc_wfmgas-11-demp8c31.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a4a64ba70ac1bf67cb2074fb80ac519 nmdc:dobj-11-6b7wv752 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-demp8c31.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f2059c1e45064402ca0be2ee7fd993e +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-demp8c31.1/nmdc_wfmgas-11-demp8c31.1_assembly.agp 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nmdc:wfmgas-11-demp8c31.1 +INFO:root:New activity id created for nmdc:omprc-11-91xvx168 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-zfk0dn20.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-zfk0dn20.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3474985232d1b5431f8c9ae24e74d136 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-zfk0dn20.1/nmdc_wfmgas-11-zfk0dn20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3474985232d1b5431f8c9ae24e74d136 nmdc:dobj-11-pnd9kn22 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zfk0dn20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7bd018e4d6eacb415b1c8886b1327667 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-zfk0dn20.1/nmdc_wfmgas-11-zfk0dn20.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7bd018e4d6eacb415b1c8886b1327667 nmdc:dobj-11-x0sx6034 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zfk0dn20.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ff00d682644eb162f572c7cf8847d46 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-zfk0dn20.1/nmdc_wfmgas-11-zfk0dn20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ff00d682644eb162f572c7cf8847d46 nmdc:dobj-11-08dbpe18 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zfk0dn20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f37d16eafebfe419d90ed55a9695f81 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-zfk0dn20.1/nmdc_wfmgas-11-zfk0dn20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f37d16eafebfe419d90ed55a9695f81 nmdc:dobj-11-tfxybd57 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-zfk0dn20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cfd98633f32026d1eac3e4c73dd5b6e6 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfmgas-11-zfk0dn20.1/nmdc_wfmgas-11-zfk0dn20.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfd98633f32026d1eac3e4c73dd5b6e6 nmdc:dobj-11-mcm97m56 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-32a9gg03.1/nmdc_wfrbt-11-32a9gg03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc968f11e2b018f2e501f43d2814a988 nmdc:dobj-11-j9p3b078 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32a9gg03.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8de3a0477af40de788ee66010c9e03e2 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-32a9gg03.1/nmdc_wfrbt-11-32a9gg03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8de3a0477af40de788ee66010c9e03e2 nmdc:dobj-11-cb2ebt73 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32a9gg03.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:209c751cf7bd4e9fb7b7b08d4ad82fb1 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-32a9gg03.1/nmdc_wfrbt-11-32a9gg03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:209c751cf7bd4e9fb7b7b08d4ad82fb1 nmdc:dobj-11-945gnr35 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32a9gg03.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59bad58b102dda832a77cf72284351c6 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-32a9gg03.1/nmdc_wfrbt-11-32a9gg03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59bad58b102dda832a77cf72284351c6 nmdc:dobj-11-d8tmbj93 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32a9gg03.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb84b729bc81890087a133f2871e26cf +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-32a9gg03.1/nmdc_wfrbt-11-32a9gg03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb84b729bc81890087a133f2871e26cf nmdc:dobj-11-0s4ean65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32a9gg03.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b230a53d2af9ec84d7abda88e8d91d49 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-32a9gg03.1/nmdc_wfrbt-11-32a9gg03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b230a53d2af9ec84d7abda88e8d91d49 nmdc:dobj-11-931b0989 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32a9gg03.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52f74233d1351f40440f96e91e675b7f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-32a9gg03.1/nmdc_wfrbt-11-32a9gg03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52f74233d1351f40440f96e91e675b7f nmdc:dobj-11-qa792g94 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-32a9gg03.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:aecf7a0e5596d067b62148092a757baa nmdc:wfrbt-11-32a9gg03.1 +INFO:root:New activity id created for nmdc:omprc-11-91xvx168 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-twg7fd38.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d7440667a19e8fc6a90fbfb3a054365d +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7440667a19e8fc6a90fbfb3a054365d nmdc:dobj-11-vbewmp19 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee58b22e0392e57035a715b72961c5e6 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee58b22e0392e57035a715b72961c5e6 nmdc:dobj-11-hj0s1192 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7ab03a39b6609ce278e0e3f51faa8a9 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7ab03a39b6609ce278e0e3f51faa8a9 nmdc:dobj-11-zpysh094 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4810c2632ca448e80de430599f0c46a5 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4810c2632ca448e80de430599f0c46a5 nmdc:dobj-11-vjb20b76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bff65ea2db1aae7a2625be499ddbb75b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bff65ea2db1aae7a2625be499ddbb75b nmdc:dobj-11-6d41a061 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f5aa84417520156844ef92ee30b2c9a9 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5aa84417520156844ef92ee30b2c9a9 nmdc:dobj-11-g5q9gb65 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65332c00375ddd1f226fb31ddecf921d +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65332c00375ddd1f226fb31ddecf921d nmdc:dobj-11-e697bf71 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3586fc9d6b40ff07f6c77724cfbabd9f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3586fc9d6b40ff07f6c77724cfbabd9f nmdc:dobj-11-qxqavr67 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96a58388650d043a1af887bb12760bba +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-91xvx168/nmdc:wfrbt-11-twg7fd38.1/nmdc_wfrbt-11-twg7fd38.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96a58388650d043a1af887bb12760bba nmdc:dobj-11-1t5eyq24 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-91xvx168 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-twg7fd38.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:21d298c0afad3fa6bf5f641ded09b208 nmdc:wfrbt-11-twg7fd38.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-91xvx168 +INFO:root:omics_processing_id: nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1d2ba3a263e6c9bff40183e75651066 nmdc:dobj-11-1qy3am95 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7cf722750e14a16a15ea62c1d2cfd737 nmdc:dobj-11-5c29jw48 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3c825c3b07ab6aece01113a9916a86f nmdc:dobj-11-3bdm6r30 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-5wjf9309 +INFO:root:New activity id created for nmdc:omprc-11-5wjf9309 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-z9zcft80.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrqc-11-z9zcft80.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d86f04e955eab8d091287ff8bf2df327 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrqc-11-z9zcft80.1/nmdc_wfrqc-11-z9zcft80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d86f04e955eab8d091287ff8bf2df327 nmdc:dobj-11-bjx98m90 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z9zcft80.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:163686eb30a0073cc74629b6dd418bb1 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrqc-11-z9zcft80.1/nmdc_wfrqc-11-z9zcft80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:163686eb30a0073cc74629b6dd418bb1 nmdc:dobj-11-jrp6j881 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z9zcft80.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1b3a54e2afd46ff9a395948182c814b6 nmdc:wfrqc-11-z9zcft80.1 +INFO:root:New activity id created for nmdc:omprc-11-5wjf9309 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-e8c48e04.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrqc-11-e8c48e04.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:905ddb243233969b03802d0a9230f42d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrqc-11-e8c48e04.1/nmdc_wfrqc-11-e8c48e04.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:905ddb243233969b03802d0a9230f42d nmdc:dobj-11-g97kte32 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file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-598mq285.1/nmdc_wfrbt-11-598mq285.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cde8b8f939eb9ba310535120fec74db7 nmdc:dobj-11-zrkfp604 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-598mq285.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bb80ae7b7e738929f901ff6373b2014 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-598mq285.1/nmdc_wfrbt-11-598mq285.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bb80ae7b7e738929f901ff6373b2014 nmdc:dobj-11-179qfn85 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-598mq285.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:163e3bdca3a56dbb1b9aa20e26689c97 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-598mq285.1/nmdc_wfrbt-11-598mq285.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:163e3bdca3a56dbb1b9aa20e26689c97 nmdc:dobj-11-3qc4j011 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-598mq285.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e8a102dd813653cff8b648e3c8fc75a4 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-598mq285.1/nmdc_wfrbt-11-598mq285.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e8a102dd813653cff8b648e3c8fc75a4 nmdc:dobj-11-y2dm2k74 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-598mq285.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82da9745685a46f705c317d22b184be9 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-598mq285.1/nmdc_wfrbt-11-598mq285.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82da9745685a46f705c317d22b184be9 nmdc:dobj-11-n26g3y64 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-598mq285.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7c25081792ffbafef3acac5419dc16e7 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-598mq285.1/nmdc_wfrbt-11-598mq285.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c25081792ffbafef3acac5419dc16e7 nmdc:dobj-11-fs4vr551 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-598mq285.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1b3a54e2afd46ff9a395948182c814b6 nmdc:wfrbt-11-598mq285.1 +INFO:root:New activity id created for nmdc:omprc-11-5wjf9309 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qbpj7w76.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bd00c989c359e3966a8cddd31da465e7 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bd00c989c359e3966a8cddd31da465e7 nmdc:dobj-11-zv67vc46 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f21e25b7c0f2e1bd6aea6f961cec41ca +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f21e25b7c0f2e1bd6aea6f961cec41ca nmdc:dobj-11-5sy12d32 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9f5cda71319189607a5b24f2e9b4471 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9f5cda71319189607a5b24f2e9b4471 nmdc:dobj-11-0jmv6q06 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d629d3b2d4002fc0fb8d7a47548ada6e +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d629d3b2d4002fc0fb8d7a47548ada6e nmdc:dobj-11-8v4r3y72 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a13d2162dce37c4abe10bf13844488c8 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a13d2162dce37c4abe10bf13844488c8 nmdc:dobj-11-zsxhyz38 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0a4f6f58d7f425236c2a05c94183b28 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0a4f6f58d7f425236c2a05c94183b28 nmdc:dobj-11-1f20x165 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d90a108d475f724aee38dd3fcc7bc6f0 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d90a108d475f724aee38dd3fcc7bc6f0 nmdc:dobj-11-qz1ets34 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92f943565899ecf21fdc4305eb521b6a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92f943565899ecf21fdc4305eb521b6a nmdc:dobj-11-s3w3ht92 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6a4b3dec36538d70b27c7f2729974a0 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-qbpj7w76.1/nmdc_wfrbt-11-qbpj7w76.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6a4b3dec36538d70b27c7f2729974a0 nmdc:dobj-11-d54h0846 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qbpj7w76.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e987de52be3e8e842b6748937c9973db nmdc:wfrbt-11-qbpj7w76.1 +INFO:root:New activity id created for nmdc:omprc-11-5wjf9309 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gbfns533.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18200c8efedee622567b44182e37ec36 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18200c8efedee622567b44182e37ec36 nmdc:dobj-11-22vgmy34 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a348979debd878f38951210042708d32 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a348979debd878f38951210042708d32 nmdc:dobj-11-dq6cvx22 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ad0bfbd04da84177feaa3e7e19fa4b4 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ad0bfbd04da84177feaa3e7e19fa4b4 nmdc:dobj-11-efv35792 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ee2d1a074e415167e2ca3f1d589aa40 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ee2d1a074e415167e2ca3f1d589aa40 nmdc:dobj-11-h9ry9x82 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9d681175937dea01ae87a7a853da397c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d681175937dea01ae87a7a853da397c nmdc:dobj-11-66tkgm54 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5abf0ba8ad7fe7d5cf5e698bbca5db0f +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5abf0ba8ad7fe7d5cf5e698bbca5db0f nmdc:dobj-11-0amc0703 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8d00334c550846456f48269dbc9f559 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8d00334c550846456f48269dbc9f559 nmdc:dobj-11-xpxv1w89 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbece988510780735dbdd03710b46694 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbece988510780735dbdd03710b46694 nmdc:dobj-11-xcq3tr87 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e19904324da296a063682288ee0091d4 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-5wjf9309/nmdc:wfrbt-11-gbfns533.1/nmdc_wfrbt-11-gbfns533.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e19904324da296a063682288ee0091d4 nmdc:dobj-11-5w4cx156 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-5wjf9309 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gbfns533.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1c975468ff948dbf6403b85f2cfd699f nmdc:wfrbt-11-gbfns533.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-5wjf9309 +INFO:root:omics_processing_id: nmdc:omprc-11-j3rye385 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9cacf6957f49114b827e06b029dff60b nmdc:dobj-11-nrdsd531 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-j3rye385 +INFO:root:New activity id created for nmdc:omprc-11-j3rye385 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-a32wb246.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j3rye385/nmdc:wfrqc-11-a32wb246.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3a089152b2e2003da7b1af59c8e0aac2 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j3rye385/nmdc:wfrqc-11-a32wb246.1/nmdc_wfrqc-11-a32wb246.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a089152b2e2003da7b1af59c8e0aac2 nmdc:dobj-11-a1aqjm16 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-j3rye385 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-a32wb246.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b66038361afb7826f34c7b266fbefdb5 +INFO:root:New file path computed for QC Statistics: 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2852d2d25440f6f2932adb6861e2b362 nmdc:dobj-11-h1xgc526 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7ce3975ea275d5110772ac8ab2317a0a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-x8h92w88.1/nmdc_wfrbt-11-x8h92w88.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7ce3975ea275d5110772ac8ab2317a0a nmdc:dobj-11-jjjd6597 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:112fe3ecc6c629dc25628243eb1f6827 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-x8h92w88.1/nmdc_wfrbt-11-x8h92w88.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:112fe3ecc6c629dc25628243eb1f6827 nmdc:dobj-11-ekk4nq73 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c721a9804331b479d2337fa77ad6995 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-x8h92w88.1/nmdc_wfrbt-11-x8h92w88.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c721a9804331b479d2337fa77ad6995 nmdc:dobj-11-w36k6859 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10b9122237d1e6d96e6e70be7893527c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-x8h92w88.1/nmdc_wfrbt-11-x8h92w88.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10b9122237d1e6d96e6e70be7893527c nmdc:dobj-11-ntk4xz70 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a627f8452624fa05f2e2b64fe3fab9aa +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-x8h92w88.1/nmdc_wfrbt-11-x8h92w88.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a627f8452624fa05f2e2b64fe3fab9aa nmdc:dobj-11-391fbp45 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45616c23ec7eb63c95c7fd494970eb1d +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-x8h92w88.1/nmdc_wfrbt-11-x8h92w88.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45616c23ec7eb63c95c7fd494970eb1d nmdc:dobj-11-dwm1pa97 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c9fcc91b69a4be70d070d8b75756eff +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-x8h92w88.1/nmdc_wfrbt-11-x8h92w88.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c9fcc91b69a4be70d070d8b75756eff nmdc:dobj-11-vra7va07 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:51122ca2ce050d13325b3055b119a42d +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-x8h92w88.1/nmdc_wfrbt-11-x8h92w88.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51122ca2ce050d13325b3055b119a42d nmdc:dobj-11-3ejrpw87 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-x8h92w88.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e252377bbf3f8a5aae8725f7316e73f3 nmdc:wfrbt-11-x8h92w88.1 +INFO:root:New activity id created for nmdc:omprc-11-w9eawn78 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-gsc49a14.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:045899a79d543e41d1d8b2e4fcef35e6 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:045899a79d543e41d1d8b2e4fcef35e6 nmdc:dobj-11-8zgtrr72 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d8210171378432a98ee381f9b98452c +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d8210171378432a98ee381f9b98452c nmdc:dobj-11-tjrrjz76 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:127e3b6688f9972f7e7c379ac9531ca7 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:127e3b6688f9972f7e7c379ac9531ca7 nmdc:dobj-11-w0y2hd85 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21a80ad36276d63324c54b894bfdf7dc +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21a80ad36276d63324c54b894bfdf7dc nmdc:dobj-11-nbfvpe31 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5a74caeb8f4ec6f8aeed1b59d42548e +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5a74caeb8f4ec6f8aeed1b59d42548e nmdc:dobj-11-qsh70h04 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26ec08800b0749088fe703ae30594a38 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26ec08800b0749088fe703ae30594a38 nmdc:dobj-11-h0kte229 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73e947f8585c86f4292c60461953e710 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73e947f8585c86f4292c60461953e710 nmdc:dobj-11-hvm4wj23 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab2417058d349cd84fa2afa0a2538060 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab2417058d349cd84fa2afa0a2538060 nmdc:dobj-11-h4f74972 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93fad0fd57e18bc4c8347bb739938271 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-w9eawn78/nmdc:wfrbt-11-gsc49a14.1/nmdc_wfrbt-11-gsc49a14.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93fad0fd57e18bc4c8347bb739938271 nmdc:dobj-11-5fgzpm27 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-w9eawn78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-gsc49a14.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b6f9ad118ca7d04f945cd432363ebc49 nmdc:wfrbt-11-gsc49a14.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-w9eawn78 +INFO:root:omics_processing_id: nmdc:omprc-11-f1n62c07 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae843613378d50d746e4287aa4253139 nmdc:dobj-11-7teksz95 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:308fcfbf30bfe8166b39c782a2a1b8b6 nmdc:dobj-11-sdvf2n48 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-f1n62c07 +INFO:root:New activity id created for nmdc:omprc-11-f1n62c07 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ynwvyr03.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-f1n62c07/nmdc:wfrqc-11-ynwvyr03.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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nmdc:a0018de01e4445021be4947075d97bf0 nmdc:dobj-11-jtd84d79 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-daxfqe83.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:757745e498cdb1e1620c4fab45ceea8f +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrqc-11-daxfqe83.1/nmdc_wfrqc-11-daxfqe83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:757745e498cdb1e1620c4fab45ceea8f nmdc:dobj-11-r34bte61 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-daxfqe83.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb nmdc:wfrqc-11-daxfqe83.1 +INFO:root:New activity id created for nmdc:omprc-11-t8z1cc46 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-v7tr2659.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrqc-11-v7tr2659.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d4df7df74816cb377a8d6d233064c2b7 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrqc-11-v7tr2659.1/nmdc_wfrqc-11-v7tr2659.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4df7df74816cb377a8d6d233064c2b7 nmdc:dobj-11-n9rd7n69 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-v7tr2659.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f53480149c65973073d3d0368df9bd6b +INFO:root:New file path computed for QC Statistics: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfmgas-11-4fgyen75.1/nmdc_wfmgas-11-4fgyen75.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3974e09bb2df03aa6286d00b83ec799 nmdc:dobj-11-k30zfd59 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4fgyen75.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d0766711e12c8e98f51808f1c79aed61 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfmgas-11-4fgyen75.1/nmdc_wfmgas-11-4fgyen75.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d0766711e12c8e98f51808f1c79aed61 nmdc:dobj-11-7pwgc810 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: 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scaffold fasta for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-exemkz12.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7c2cdf875292643a50a526e0e482af1 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfmgas-11-exemkz12.1/nmdc_wfmgas-11-exemkz12.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7c2cdf875292643a50a526e0e482af1 nmdc:dobj-11-05y78696 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-exemkz12.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b2dfa16817e72b1b304b9879364c064c +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfmgas-11-exemkz12.1/nmdc_wfmgas-11-exemkz12.1_assembly.agp 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nmdc_wfrbt-11-aszg7349.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c434666e12c23562b74d8e525f7c36ea +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-aszg7349.1/nmdc_wfrbt-11-aszg7349.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c434666e12c23562b74d8e525f7c36ea nmdc:dobj-11-xyv2yg72 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aszg7349.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f2027da994ce1731134a411c9e062e27 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-aszg7349.1/nmdc_wfrbt-11-aszg7349.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2027da994ce1731134a411c9e062e27 nmdc:dobj-11-csnppt47 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aszg7349.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ec33c797975678c3c2468722fadb416 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-aszg7349.1/nmdc_wfrbt-11-aszg7349.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ec33c797975678c3c2468722fadb416 nmdc:dobj-11-6d4sd929 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aszg7349.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:32e27928eb531e9b390e448886ceed80 nmdc:wfrbt-11-aszg7349.1 +INFO:root:New activity id 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file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-56jfck69.1/nmdc_wfrbt-11-56jfck69.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb94e0720b59a3938ab039019535f298 nmdc:dobj-11-7cyq7s78 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-56jfck69.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:409ffa43d4b3227f0628e986ce1b656a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-56jfck69.1/nmdc_wfrbt-11-56jfck69.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:409ffa43d4b3227f0628e986ce1b656a nmdc:dobj-11-snr9am46 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-56jfck69.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:774aa08abc2eb37eef76916c30698079 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-56jfck69.1/nmdc_wfrbt-11-56jfck69.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:774aa08abc2eb37eef76916c30698079 nmdc:dobj-11-m0v5jw24 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-56jfck69.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cbfdb4eb500d2a714053d6bb27cb7fbb nmdc:wfrbt-11-56jfck69.1 +INFO:root:New activity id created for nmdc:omprc-11-t8z1cc46 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-wmtayp42.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45f9d8f57ea61c6512d64a9b6f274c26 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45f9d8f57ea61c6512d64a9b6f274c26 nmdc:dobj-11-tbbsk887 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b29d18da528a1b449d0d556a63dbf458 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b29d18da528a1b449d0d556a63dbf458 nmdc:dobj-11-d1s3aw75 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89b84f8a034d789c0d4735688416c5d7 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89b84f8a034d789c0d4735688416c5d7 nmdc:dobj-11-sc4m7v38 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7da45b95b6fe2c3315a8d473d4c27ea4 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7da45b95b6fe2c3315a8d473d4c27ea4 nmdc:dobj-11-fy2xp609 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6bc3658388eacaa7bc3a0c4cf3dee77d +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6bc3658388eacaa7bc3a0c4cf3dee77d nmdc:dobj-11-v8havv39 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1bad7031ff7131a7ed084f255781d6f7 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bad7031ff7131a7ed084f255781d6f7 nmdc:dobj-11-yz839742 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b6a3d92913b3d5180fe3fff24bffbe0 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b6a3d92913b3d5180fe3fff24bffbe0 nmdc:dobj-11-pr8rpe08 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa43832d9fd049df8a919c9d609f6ce0 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa43832d9fd049df8a919c9d609f6ce0 nmdc:dobj-11-c0yef604 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3cd5fcc819ca4958ea9e988ade2d56f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-wmtayp42.1/nmdc_wfrbt-11-wmtayp42.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3cd5fcc819ca4958ea9e988ade2d56f nmdc:dobj-11-3xtxqy16 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wmtayp42.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fe5f0d8cee2d9ff0c8848447c1ea8fc5 nmdc:wfrbt-11-wmtayp42.1 +INFO:root:New activity id created for nmdc:omprc-11-t8z1cc46 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ekmce445.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2cb93afe95c8057c6a1fd696be743021 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2cb93afe95c8057c6a1fd696be743021 nmdc:dobj-11-9pyjbd81 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7444876a145f75227278f144ef5a8f0 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7444876a145f75227278f144ef5a8f0 nmdc:dobj-11-awjw2748 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:324fa3f128cf167174b4559521b174e5 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:324fa3f128cf167174b4559521b174e5 nmdc:dobj-11-jvtzdv11 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dad39a02a3dab8a48495693d0841525c +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dad39a02a3dab8a48495693d0841525c nmdc:dobj-11-8f4zm716 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be2eafcad85e819114e2462eb8d7b5f8 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be2eafcad85e819114e2462eb8d7b5f8 nmdc:dobj-11-zhw05a10 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4f9125483b8e0efd4e05fa5a7011adda +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f9125483b8e0efd4e05fa5a7011adda nmdc:dobj-11-b7z2jz52 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:35b286aed8e927456e5775e55eaf121f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35b286aed8e927456e5775e55eaf121f nmdc:dobj-11-payxpq29 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f36e79a4c22f9297c9ae036a12f38ae +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f36e79a4c22f9297c9ae036a12f38ae nmdc:dobj-11-yvpxst12 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:99180b2576473dc5081ec7db2182a1f7 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t8z1cc46/nmdc:wfrbt-11-ekmce445.1/nmdc_wfrbt-11-ekmce445.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99180b2576473dc5081ec7db2182a1f7 nmdc:dobj-11-hepvgp10 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-t8z1cc46 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ekmce445.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f93b8b137971c19a3c60e39d2e021e7e nmdc:wfrbt-11-ekmce445.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-t8z1cc46 +INFO:root:omics_processing_id: nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb803b18964c9370a4c2261d29a72fbb nmdc:dobj-11-chzg2q43 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43cf30fae24adfea08ad1b0abfcb73ce nmdc:dobj-11-gvfd2k06 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-75458r71 +INFO:root:New activity id created for nmdc:omprc-11-75458r71 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-d5kcgk97.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrqc-11-d5kcgk97.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7224a1f97b1df4c5987a31b3abf78ecc +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrqc-11-d5kcgk97.1/nmdc_wfrqc-11-d5kcgk97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7224a1f97b1df4c5987a31b3abf78ecc nmdc:dobj-11-cdc37t27 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d5kcgk97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5b67904aa25ed2306ae7cbf782b0978 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrqc-11-d5kcgk97.1/nmdc_wfrqc-11-d5kcgk97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5b67904aa25ed2306ae7cbf782b0978 nmdc:dobj-11-68s59539 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-d5kcgk97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e57a496e78e25188f86efc03e7fa59a9 nmdc:wfrqc-11-d5kcgk97.1 +INFO:root:New activity id created for nmdc:omprc-11-75458r71 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-1dqqtb95.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrqc-11-1dqqtb95.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ea4d4aa5b410af5b1b33d21b87cc9f75 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrqc-11-1dqqtb95.1/nmdc_wfrqc-11-1dqqtb95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ea4d4aa5b410af5b1b33d21b87cc9f75 nmdc:dobj-11-a5a7kg27 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-1dqqtb95.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82fcdc05b323b23874518fd0d960856a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrqc-11-1dqqtb95.1/nmdc_wfrqc-11-1dqqtb95.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82fcdc05b323b23874518fd0d960856a nmdc:dobj-11-cbsg7483 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: 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nmdc:0326f5531557c3c4ae1b1c43d54f8ade nmdc:dobj-11-htyp1311 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e74k3v26.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:117f42283c82414cdebe0d7be3f58e40 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfmgas-11-e74k3v26.1/nmdc_wfmgas-11-e74k3v26.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:117f42283c82414cdebe0d7be3f58e40 nmdc:dobj-11-997cy103 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-e74k3v26.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:851277deca003f476092bb74e140d12e +INFO:root:New file path computed for Assembly Coverage BAM: 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nmdc_wfrbt-11-1105k071.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d27a08c9e68aaea155f2c34310c24c43 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1105k071.1/nmdc_wfrbt-11-1105k071.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d27a08c9e68aaea155f2c34310c24c43 nmdc:dobj-11-142s5654 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1105k071.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bbcaea92f558288ba2495cc16598413a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1105k071.1/nmdc_wfrbt-11-1105k071.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bbcaea92f558288ba2495cc16598413a nmdc:dobj-11-x33rat13 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1105k071.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e64507b6932b63aa0b1e1ece9980da9c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1105k071.1/nmdc_wfrbt-11-1105k071.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e64507b6932b63aa0b1e1ece9980da9c nmdc:dobj-11-07m7e126 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1105k071.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5043d72cc886ce2e5d15f619ec124c9a nmdc:wfrbt-11-1105k071.1 +INFO:root:New activity id 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1zcq9d27.1/nmdc_wfrbt-11-1zcq9d27.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6106e5dcbf1b8e8b8094779f6d35f3ab nmdc:dobj-11-gbgxcn88 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zcq9d27.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad63f96e6f4b925759fdc2dedd315288 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1zcq9d27.1/nmdc_wfrbt-11-1zcq9d27.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad63f96e6f4b925759fdc2dedd315288 nmdc:dobj-11-v3qqhz71 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zcq9d27.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5373915e0565c0f676d20fd3b30e458 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1zcq9d27.1/nmdc_wfrbt-11-1zcq9d27.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5373915e0565c0f676d20fd3b30e458 nmdc:dobj-11-2dyfng09 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zcq9d27.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bff25ae2ce9d3eb8856a48f2b9253c0 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1zcq9d27.1/nmdc_wfrbt-11-1zcq9d27.1_centrifuge_report.tsv 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file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1zcq9d27.1/nmdc_wfrbt-11-1zcq9d27.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0d03fc4f6d489d2cbf6eeb6bf580e0fe nmdc:dobj-11-498hd076 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zcq9d27.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23842d82847a1b7bae2c5da7a5874f98 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1zcq9d27.1/nmdc_wfrbt-11-1zcq9d27.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23842d82847a1b7bae2c5da7a5874f98 nmdc:dobj-11-y573qf58 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zcq9d27.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eeda9248dd506b8c6546e5a3fbfdc548 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-75458r71/nmdc:wfrbt-11-1zcq9d27.1/nmdc_wfrbt-11-1zcq9d27.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eeda9248dd506b8c6546e5a3fbfdc548 nmdc:dobj-11-9pqkjz76 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-75458r71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1zcq9d27.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e57a496e78e25188f86efc03e7fa59a9 nmdc:wfrbt-11-1zcq9d27.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-75458r71 +INFO:root:omics_processing_id: nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f220ed505e0f9982125df283ae33406b nmdc:dobj-11-z86bw650 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad3e38f4880e471c4877452adc0512e1 nmdc:dobj-11-nrw0bg06 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zzzzv091 +INFO:root:New activity id created for nmdc:omprc-11-zzzzv091 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mxzhsv15.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrqc-11-mxzhsv15.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b1520ff3fb64a62d67f308dad4aabba +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrqc-11-mxzhsv15.1/nmdc_wfrqc-11-mxzhsv15.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b1520ff3fb64a62d67f308dad4aabba nmdc:dobj-11-shmx4n48 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfmgas-11-5w70ep47.1/nmdc_wfmgas-11-5w70ep47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d1f0b5d4a0de1abf454e09e03f4fde1 nmdc:dobj-11-apk4z850 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w70ep47.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee0e347a0da47d694f7aa36df8dfcd5b +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfmgas-11-5w70ep47.1/nmdc_wfmgas-11-5w70ep47.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee0e347a0da47d694f7aa36df8dfcd5b nmdc:dobj-11-x90h9v97 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-5w70ep47.1_scaffolds.fna 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nmdc_wfmgas-11-k9sb5p42.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6f581034a1ca9502571051655e7292f1 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfmgas-11-k9sb5p42.1/nmdc_wfmgas-11-k9sb5p42.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f581034a1ca9502571051655e7292f1 nmdc:dobj-11-jwtgqw05 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k9sb5p42.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b48a3c5e687f8e112b0e9bf39c9a3b62 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfmgas-11-k9sb5p42.1/nmdc_wfmgas-11-k9sb5p42.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b48a3c5e687f8e112b0e9bf39c9a3b62 nmdc:dobj-11-qg5afz72 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-k9sb5p42.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:ab98bd46f69852307d0ed36a6c73d0cf nmdc:wfmgas-11-k9sb5p42.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-zzzzv091 +INFO:root:New activity id created for nmdc:omprc-11-zzzzv091 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8by23s08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3991320eff418401ec4fb251dc669ca5 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3991320eff418401ec4fb251dc669ca5 nmdc:dobj-11-j4rhd920 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f77556b288d95857ccf7d804f466bacb +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f77556b288d95857ccf7d804f466bacb nmdc:dobj-11-mtt27449 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ee22ae195890d30de6074eceed78546 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ee22ae195890d30de6074eceed78546 nmdc:dobj-11-y4760k40 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:019767d99b12a80a24732e78005e11ea +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:019767d99b12a80a24732e78005e11ea nmdc:dobj-11-8zwatq19 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e1a5c91ef8084c7f2b1c0b6eba33f4ec +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e1a5c91ef8084c7f2b1c0b6eba33f4ec nmdc:dobj-11-gmb6rm02 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:820fc937d569d91afaed6e1ccac1bd72 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:820fc937d569d91afaed6e1ccac1bd72 nmdc:dobj-11-38ps2r47 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f327d1b9781ed9f697b6c0e90fc31c95 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f327d1b9781ed9f697b6c0e90fc31c95 nmdc:dobj-11-rfcrw252 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60d2513a51927685f8054eb4c1372d9b +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60d2513a51927685f8054eb4c1372d9b nmdc:dobj-11-wz21wx80 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:30cd69d221622ec094b294745b86eaf9 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-8by23s08.1/nmdc_wfrbt-11-8by23s08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:30cd69d221622ec094b294745b86eaf9 nmdc:dobj-11-3xx13w44 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8by23s08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ab98bd46f69852307d0ed36a6c73d0cf nmdc:wfrbt-11-8by23s08.1 +INFO:root:New activity id created for nmdc:omprc-11-zzzzv091 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-eh1nkt58.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:910458b277b9562364460e0171b4dd77 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:910458b277b9562364460e0171b4dd77 nmdc:dobj-11-jtrhqy56 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9dd589fa36e71ac58fb3086a1477846a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9dd589fa36e71ac58fb3086a1477846a nmdc:dobj-11-6gekrf25 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f6adf357acd3830132b8bf4e21f602ec +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f6adf357acd3830132b8bf4e21f602ec nmdc:dobj-11-a8ge4z73 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91894e0d8714da31b1284cdb0e1dcfa1 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91894e0d8714da31b1284cdb0e1dcfa1 nmdc:dobj-11-gneq9e14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb36d60da00c92fe6fa4f5bc680f94d0 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb36d60da00c92fe6fa4f5bc680f94d0 nmdc:dobj-11-z1bkqk76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e98779b6088b810a9185f8fabb796439 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e98779b6088b810a9185f8fabb796439 nmdc:dobj-11-3jt0v641 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a766cefe7aab89fd557af69bc4d509f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a766cefe7aab89fd557af69bc4d509f nmdc:dobj-11-7vrf8x90 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18dc61a731e2ee75707ef08932659d55 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18dc61a731e2ee75707ef08932659d55 nmdc:dobj-11-04nq9r87 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be741c34fe8702655a5ed93567766989 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zzzzv091/nmdc:wfrbt-11-eh1nkt58.1/nmdc_wfrbt-11-eh1nkt58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be741c34fe8702655a5ed93567766989 nmdc:dobj-11-q4e8ws62 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zzzzv091 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-eh1nkt58.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c246657aad02c3c78dca09ecee6f7e47 nmdc:wfrbt-11-eh1nkt58.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-zzzzv091 +INFO:root:omics_processing_id: nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9cd380614657f8bb1fa13674a77a4bc nmdc:dobj-11-06gtv646 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2bc8b8e0c2d076e24e6e920cc15d1576 nmdc:dobj-11-k2rkb927 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1785fea851d20737d5992696760ee722 nmdc:dobj-11-vgvw7d63 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-enfb5c62 +INFO:root:New activity id created for nmdc:omprc-11-enfb5c62 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2zw13z36.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfrqc-11-2zw13z36.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e4590864b9defe453e353193e5e6969 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfrqc-11-2zw13z36.1/nmdc_wfrqc-11-2zw13z36.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e4590864b9defe453e353193e5e6969 nmdc:dobj-11-yp2bbw75 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2zw13z36.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f853edbd2f9b7403fea6ad7e3ce2e45f +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfrqc-11-2zw13z36.1/nmdc_wfrqc-11-2zw13z36.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f853edbd2f9b7403fea6ad7e3ce2e45f nmdc:dobj-11-pda5x434 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2zw13z36.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:df9f601ef4e0eb13288c45886dae6df1 nmdc:wfrqc-11-2zw13z36.1 +INFO:root:New activity id created for nmdc:omprc-11-enfb5c62 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7fgqd707.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfrqc-11-7fgqd707.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ef8788067308145dcb3e9a371b7f654 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfrqc-11-7fgqd707.1/nmdc_wfrqc-11-7fgqd707.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ef8788067308145dcb3e9a371b7f654 nmdc:dobj-11-74zbc942 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7fgqd707.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6109b028da661758ad4ff643ea61d22 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfrqc-11-7fgqd707.1/nmdc_wfrqc-11-7fgqd707.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6109b028da661758ad4ff643ea61d22 nmdc:dobj-11-ze959590 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7fgqd707.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e8b699c98605cb29ea1f080f3273adb9 nmdc:wfrqc-11-7fgqd707.1 +INFO:root:New activity id created for nmdc:omprc-11-enfb5c62 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-q77wr147.1 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfmgas-11-mz3n9s40.1/nmdc_wfmgas-11-mz3n9s40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a9fd2278ed3f6eddb9d5820ce92861b nmdc:dobj-11-kyxm9h90 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mz3n9s40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0432d5c83346cc038651fe5abc2ec06f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfmgas-11-mz3n9s40.1/nmdc_wfmgas-11-mz3n9s40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0432d5c83346cc038651fe5abc2ec06f nmdc:dobj-11-xrwawh97 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mz3n9s40.1_scaffolds.fna 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfmgas-11-v2kkc124.1/nmdc_wfmgas-11-v2kkc124.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16278e2f4a87471b1da44fce4a58ed98 nmdc:dobj-11-d2211b54 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v2kkc124.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6bfd91d7590b6b6f7a577d62f248b66 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfmgas-11-v2kkc124.1/nmdc_wfmgas-11-v2kkc124.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6bfd91d7590b6b6f7a577d62f248b66 nmdc:dobj-11-g1ht2376 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v2kkc124.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6f3430081c2d7904cf4a0e336e7db807 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfmgas-11-v2kkc124.1/nmdc_wfmgas-11-v2kkc124.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f3430081c2d7904cf4a0e336e7db807 nmdc:dobj-11-ce8ekn75 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-enfb5c62 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v2kkc124.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5c3b462f3508005a92473fc4e1513f9 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-enfb5c62/nmdc:wfmgas-11-v2kkc124.1/nmdc_wfmgas-11-v2kkc124.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5c3b462f3508005a92473fc4e1513f9 nmdc:dobj-11-t1na8049 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nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvs81h45.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a21bf2495b9c930fb4b06f9e45bbe0f6 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-qvs81h45.1/nmdc_wfrbt-11-qvs81h45.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a21bf2495b9c930fb4b06f9e45bbe0f6 nmdc:dobj-11-x0jwz037 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvs81h45.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a9caa27e46d3c3ed9c0e8eb1903d8cb +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-qvs81h45.1/nmdc_wfrbt-11-qvs81h45.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a9caa27e46d3c3ed9c0e8eb1903d8cb nmdc:dobj-11-cfnyqs02 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvs81h45.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7945c95f3318ce2a83edccb103cb5c03 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-qvs81h45.1/nmdc_wfrbt-11-qvs81h45.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7945c95f3318ce2a83edccb103cb5c03 nmdc:dobj-11-f9zz6b46 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvs81h45.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03d63dfb5e121ef3a0e059fad8c2bb7e +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-qvs81h45.1/nmdc_wfrbt-11-qvs81h45.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03d63dfb5e121ef3a0e059fad8c2bb7e nmdc:dobj-11-xqeq6k38 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvs81h45.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ffb1d0e98a5918f7e1a71ee1070598ce +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-qvs81h45.1/nmdc_wfrbt-11-qvs81h45.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ffb1d0e98a5918f7e1a71ee1070598ce nmdc:dobj-11-yqdrtv18 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qvs81h45.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:f2ead36238e5cc6006966bb748240677 nmdc:wfrbt-11-qvs81h45.1 +INFO:root:New activity id created for nmdc:omprc-11-d5yqmn71 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-0vpfbz34.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:978f917ac376777d589688975b9d0c88 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:978f917ac376777d589688975b9d0c88 nmdc:dobj-11-y10djt34 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd73b5c27e21a1029d3aa4dffaa00963 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd73b5c27e21a1029d3aa4dffaa00963 nmdc:dobj-11-psfqht04 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b76cac1d4e17e3ae336bfbaf32555aa5 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b76cac1d4e17e3ae336bfbaf32555aa5 nmdc:dobj-11-t9nsfe59 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c85f4406ffa6b10b07ba5e02820143f3 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c85f4406ffa6b10b07ba5e02820143f3 nmdc:dobj-11-hmq9w913 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e47672bb1f51d2490da4a5cf440f099c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e47672bb1f51d2490da4a5cf440f099c nmdc:dobj-11-0nmgmy78 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:acb01d83e0ba7306d0b7df6686d4295c +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:acb01d83e0ba7306d0b7df6686d4295c nmdc:dobj-11-3jbygx14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:611665fab92327d5f5eba3a10a77b806 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:611665fab92327d5f5eba3a10a77b806 nmdc:dobj-11-00w90d16 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c474b0fea33f0ee8e47fffd93dd1757b +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c474b0fea33f0ee8e47fffd93dd1757b nmdc:dobj-11-w2damg60 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c50d1bebe368e78219573a7235345570 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d5yqmn71/nmdc:wfrbt-11-0vpfbz34.1/nmdc_wfrbt-11-0vpfbz34.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c50d1bebe368e78219573a7235345570 nmdc:dobj-11-m9zpg607 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-d5yqmn71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0vpfbz34.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1c6076bb35ad8ada919b62cb45cbfa04 nmdc:wfrbt-11-0vpfbz34.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-d5yqmn71 +INFO:root:omics_processing_id: nmdc:omprc-11-pt664b55 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2fdc546f98ca51e07f85f0c51d948b2e nmdc:dobj-11-9mbzt240 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2542db62b08df2adb9cf830b42eeba4 nmdc:dobj-11-b27pgx72 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-pt664b55 +INFO:root:New activity id created for nmdc:omprc-11-pt664b55 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-f1a3ce97.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pt664b55/nmdc:wfrqc-11-f1a3ce97.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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nmdc_wfrqc-11-vvke3p21.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae2edd75bddcaa72458a9e5001170a74 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pt664b55/nmdc:wfrqc-11-vvke3p21.1/nmdc_wfrqc-11-vvke3p21.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae2edd75bddcaa72458a9e5001170a74 nmdc:dobj-11-qp1j2n21 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-pt664b55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vvke3p21.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:97bbd249994f810a5375029e811c0da1 nmdc:wfrqc-11-vvke3p21.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-pt664b55 +INFO:root:New activity id created for nmdc:omprc-11-pt664b55 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-s66a3981.1 +INFO:root:Skipping directory creation for 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nmdc:dobj-11-p0x9vv90 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-pt664b55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s66a3981.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:455ede6787249315c9e1c40bde963ee9 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-pt664b55/nmdc:wfmgas-11-s66a3981.1/nmdc_wfmgas-11-s66a3981.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:455ede6787249315c9e1c40bde963ee9 nmdc:dobj-11-zv8es703 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-pt664b55 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-s66a3981.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b11c681f4550f7bc55290e7b251fbbd8 +INFO:root:New file path computed for Assembly AGP: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfmgas-11-z893pz69.1/nmdc_wfmgas-11-z893pz69.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d8c7d920fae962f95345cf6bf1b63ad nmdc:dobj-11-71j8wz24 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z893pz69.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:70d8ebba65edb7f6b11bad2531770a3d +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfmgas-11-z893pz69.1/nmdc_wfmgas-11-z893pz69.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:70d8ebba65edb7f6b11bad2531770a3d nmdc:dobj-11-g1bbyp19 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-z893pz69.1_assembly.agp 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scaffold fasta for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p674zf32.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a30035a2b97204209c5421f646f0b55 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfmgas-11-p674zf32.1/nmdc_wfmgas-11-p674zf32.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a30035a2b97204209c5421f646f0b55 nmdc:dobj-11-bfhhep43 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p674zf32.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18b07874bb038e8b36489351890b768b +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfmgas-11-p674zf32.1/nmdc_wfmgas-11-p674zf32.1_assembly.agp 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nmdc:wfmgas-11-p674zf32.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-g882jv95 +INFO:root:New activity id created for nmdc:omprc-11-g882jv95 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-2zgczh04.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ede5408e6348c51c6ec14375012e3fdd +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ede5408e6348c51c6ec14375012e3fdd nmdc:dobj-11-xaa06832 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22040cdd5b92a595f1f7162fc1d0e747 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22040cdd5b92a595f1f7162fc1d0e747 nmdc:dobj-11-hyctdm26 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:585d259b4b8a00826af403fbfcb2b8f7 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:585d259b4b8a00826af403fbfcb2b8f7 nmdc:dobj-11-xd9gxx08 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd117ac046c68bef1f7730a298dbed5e +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd117ac046c68bef1f7730a298dbed5e nmdc:dobj-11-2t4n8732 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a5ae1247869778c85220583b37b3307 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a5ae1247869778c85220583b37b3307 nmdc:dobj-11-s715xc38 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9410420dd3d38cd955a4fe0ff449185 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9410420dd3d38cd955a4fe0ff449185 nmdc:dobj-11-1qhm5k32 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebd796ba13737b7e19ba0191a8857791 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebd796ba13737b7e19ba0191a8857791 nmdc:dobj-11-fz4pg663 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:368f91e102c552bf8151c130ef17dc7d +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:368f91e102c552bf8151c130ef17dc7d nmdc:dobj-11-p8a8y621 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd336d650b8e3a4235eed1ae497636d3 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g882jv95/nmdc:wfrbt-11-2zgczh04.1/nmdc_wfrbt-11-2zgczh04.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd336d650b8e3a4235eed1ae497636d3 nmdc:dobj-11-sxsy5p35 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g882jv95 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2zgczh04.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c741e7ece6da4d44c85ccf65f83074e8 nmdc:wfrbt-11-2zgczh04.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-g882jv95 +INFO:root:omics_processing_id: nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9c2b74e4eca5464c22545e0c214752d nmdc:dobj-11-y0kef797 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb9059a947fe1a4ff8df6bc03cd501c9 nmdc:dobj-11-gzmcnn88 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-nf25mq76 +INFO:root:New activity id created for nmdc:omprc-11-nf25mq76 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-07p9qt35.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrqc-11-07p9qt35.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6766bada340e1152ba352a00acff57c8 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrqc-11-07p9qt35.1/nmdc_wfrqc-11-07p9qt35.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6766bada340e1152ba352a00acff57c8 nmdc:dobj-11-8jv4p363 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-07p9qt35.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2d799a89b763357f51cdee9ce601c48 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrqc-11-07p9qt35.1/nmdc_wfrqc-11-07p9qt35.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2d799a89b763357f51cdee9ce601c48 nmdc:dobj-11-xp313k16 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-07p9qt35.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a59eabd0e8db246276b42ecd0f4ed737 nmdc:wfrqc-11-07p9qt35.1 +INFO:root:New activity id created for nmdc:omprc-11-nf25mq76 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-kjzm4945.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrqc-11-kjzm4945.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bd5b7f86ccd9d4bdaf76fd31a90d15a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrqc-11-kjzm4945.1/nmdc_wfrqc-11-kjzm4945.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bd5b7f86ccd9d4bdaf76fd31a90d15a nmdc:dobj-11-889wqz53 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kjzm4945.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b85179748048f404ff96e65d45956bc +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrqc-11-kjzm4945.1/nmdc_wfrqc-11-kjzm4945.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b85179748048f404ff96e65d45956bc nmdc:dobj-11-23kb8x94 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-kjzm4945.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:b248efe793fc73739e82694dc7577dfd nmdc:wfrqc-11-kjzm4945.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-nf25mq76 +INFO:root:New activity id created for nmdc:omprc-11-nf25mq76 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-gsc6d112.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-gsc6d112.1 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scaffold fasta for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gsc6d112.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e0cd4e7944948623e47468273a3ff0ad +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-gsc6d112.1/nmdc_wfmgas-11-gsc6d112.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e0cd4e7944948623e47468273a3ff0ad nmdc:dobj-11-s363th07 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gsc6d112.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc2e278bbd1c1b32bc6638266ab88597 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-gsc6d112.1/nmdc_wfmgas-11-gsc6d112.1_assembly.agp 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nmdc:wfmgas-11-gsc6d112.1 +INFO:root:New activity id created for nmdc:omprc-11-nf25mq76 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-m1rvb431.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-m1rvb431.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7af123026f591ee063efd36ab8b75d75 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-m1rvb431.1/nmdc_wfmgas-11-m1rvb431.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7af123026f591ee063efd36ab8b75d75 nmdc:dobj-11-ekkqgr91 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m1rvb431.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77ddfcbc5c0b8302f75528488bc38d3c +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-m1rvb431.1/nmdc_wfmgas-11-m1rvb431.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77ddfcbc5c0b8302f75528488bc38d3c nmdc:dobj-11-px4rbe79 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m1rvb431.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4df408674128b6f288ce92e61373ee06 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-m1rvb431.1/nmdc_wfmgas-11-m1rvb431.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4df408674128b6f288ce92e61373ee06 nmdc:dobj-11-esn7tf04 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m1rvb431.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:889859a036cc1528ff7bae7b9df5eb3e +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-m1rvb431.1/nmdc_wfmgas-11-m1rvb431.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:889859a036cc1528ff7bae7b9df5eb3e nmdc:dobj-11-hmeaaq81 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-m1rvb431.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3632b3b9e1822d992731af0826a31b9 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfmgas-11-m1rvb431.1/nmdc_wfmgas-11-m1rvb431.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3632b3b9e1822d992731af0826a31b9 nmdc:dobj-11-e8h71a84 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad11b0f28e3b5f0f4a1e0007a4e56ee6 nmdc:dobj-11-yezz8d42 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b3cc4a82f3f85336ffaf55bb9fb4611 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrbt-11-nc82e809.1/nmdc_wfrbt-11-nc82e809.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b3cc4a82f3f85336ffaf55bb9fb4611 nmdc:dobj-11-rq4qzg84 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a86f535b671769b18518d89839ff5dca +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrbt-11-nc82e809.1/nmdc_wfrbt-11-nc82e809.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a86f535b671769b18518d89839ff5dca nmdc:dobj-11-67xn6w34 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c78cccc7712aa0c266d3900d01832eff +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrbt-11-nc82e809.1/nmdc_wfrbt-11-nc82e809.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c78cccc7712aa0c266d3900d01832eff nmdc:dobj-11-sd1g1872 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dbdd5e0998c863d3cf34a4eacfcb7a26 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrbt-11-nc82e809.1/nmdc_wfrbt-11-nc82e809.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dbdd5e0998c863d3cf34a4eacfcb7a26 nmdc:dobj-11-cv6apk02 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37853e49d8fbd27798ddd9562f8b0f0b +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrbt-11-nc82e809.1/nmdc_wfrbt-11-nc82e809.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37853e49d8fbd27798ddd9562f8b0f0b nmdc:dobj-11-2dxd2k57 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0aed81c0b6e16bd3718d4259eff27259 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrbt-11-nc82e809.1/nmdc_wfrbt-11-nc82e809.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0aed81c0b6e16bd3718d4259eff27259 nmdc:dobj-11-jes0yh22 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b10bcfffd53f2a4e935a263acc2ba465 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrbt-11-nc82e809.1/nmdc_wfrbt-11-nc82e809.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b10bcfffd53f2a4e935a263acc2ba465 nmdc:dobj-11-zchtr581 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c986bb4f41dcca0bf621d98a6f39d666 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-nf25mq76/nmdc:wfrbt-11-nc82e809.1/nmdc_wfrbt-11-nc82e809.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c986bb4f41dcca0bf621d98a6f39d666 nmdc:dobj-11-pg6e5n74 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-nf25mq76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nc82e809.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b248efe793fc73739e82694dc7577dfd nmdc:wfrbt-11-nc82e809.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-nf25mq76 +INFO:root:omics_processing_id: nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb49c788b02c91f5e797271546928553 nmdc:dobj-11-gkre5z53 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-t7yc2d58 +INFO:root:New activity id created for nmdc:omprc-11-t7yc2d58 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ky2fr284.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfrqc-11-ky2fr284.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:299cb8b39650d19b2c8a439a1aa94990 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfrqc-11-ky2fr284.1/nmdc_wfrqc-11-ky2fr284.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:299cb8b39650d19b2c8a439a1aa94990 nmdc:dobj-11-ezx4aq95 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ky2fr284.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d94ed0cb34ba5af9c51580746a5abc81 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfrqc-11-ky2fr284.1/nmdc_wfrqc-11-ky2fr284.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d94ed0cb34ba5af9c51580746a5abc81 nmdc:dobj-11-t0qprd51 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ky2fr284.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:87cef3b0e90086303369a22d8ef93840 nmdc:wfrqc-11-ky2fr284.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-t7yc2d58 +INFO:root:New activity id created for nmdc:omprc-11-t7yc2d58 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-9w9can77.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfmgas-11-9w9can77.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a4609f1a945b9419603a08f12c703df5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfmgas-11-9w9can77.1/nmdc_wfmgas-11-9w9can77.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4609f1a945b9419603a08f12c703df5 nmdc:dobj-11-8cysh330 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9w9can77.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab662bd5e1531a33befe5e35fc864ab9 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfmgas-11-9w9can77.1/nmdc_wfmgas-11-9w9can77.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab662bd5e1531a33befe5e35fc864ab9 nmdc:dobj-11-7c8fak13 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9w9can77.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0b3a09995c876dd7192e8dac8079a75 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfmgas-11-9w9can77.1/nmdc_wfmgas-11-9w9can77.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0b3a09995c876dd7192e8dac8079a75 nmdc:dobj-11-7nqbf595 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9w9can77.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:401760e30807b5f7083f93cc8a7afe36 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfmgas-11-9w9can77.1/nmdc_wfmgas-11-9w9can77.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:401760e30807b5f7083f93cc8a7afe36 nmdc:dobj-11-z481ka83 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9w9can77.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ab5139f0d73eed5a4baf4a93c947ebb8 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-t7yc2d58/nmdc:wfmgas-11-9w9can77.1/nmdc_wfmgas-11-9w9can77.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab5139f0d73eed5a4baf4a93c947ebb8 nmdc:dobj-11-e8sxbs21 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9w9can77.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:87cef3b0e90086303369a22d8ef93840 nmdc:wfmgas-11-9w9can77.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-t7yc2d58 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-t7yc2d58 +INFO:root:omics_processing_id: nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:473f58f1ab6280b300adf45019663601 nmdc:dobj-11-fv7evm10 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scaffold fasta for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8gg2xg88.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e07688535c422d78b48f08a1dab9dfc7 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfmgas-11-8gg2xg88.1/nmdc_wfmgas-11-8gg2xg88.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e07688535c422d78b48f08a1dab9dfc7 nmdc:dobj-11-qwvtas17 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8gg2xg88.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ee8a8559472ec4752d7fc5f1353e65f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfmgas-11-8gg2xg88.1/nmdc_wfmgas-11-8gg2xg88.1_assembly.agp 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nmdc_wfrbt-11-j51fcs05.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fdb062a3c1f0adc50544e1a9196cb7ef +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-j51fcs05.1/nmdc_wfrbt-11-j51fcs05.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdb062a3c1f0adc50544e1a9196cb7ef nmdc:dobj-11-z4mzwe39 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j51fcs05.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eca6ad1173296d6e9c964f9f5bdab916 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-j51fcs05.1/nmdc_wfrbt-11-j51fcs05.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eca6ad1173296d6e9c964f9f5bdab916 nmdc:dobj-11-s1gkg748 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j51fcs05.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5487958e8ad11f9ba0faef18726cd11 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-j51fcs05.1/nmdc_wfrbt-11-j51fcs05.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5487958e8ad11f9ba0faef18726cd11 nmdc:dobj-11-thp5xv80 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-j51fcs05.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1abbb2faf6f45ab89ca5f364833c4020 nmdc:wfrbt-11-j51fcs05.1 +INFO:root:New activity id 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nmdc_wfrbt-11-hrs82j61.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3edf791c8bb1e1dbd2b820de820ff2b +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-hrs82j61.1/nmdc_wfrbt-11-hrs82j61.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3edf791c8bb1e1dbd2b820de820ff2b nmdc:dobj-11-xyc2x861 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hrs82j61.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7c5b9a96c7a305d78c16ab8954c3cb0 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-hrs82j61.1/nmdc_wfrbt-11-hrs82j61.1_centrifuge_report.tsv 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nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hrs82j61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:81fce541fb457bc51e33fde8048bf4e3 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-hrs82j61.1/nmdc_wfrbt-11-hrs82j61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:81fce541fb457bc51e33fde8048bf4e3 nmdc:dobj-11-w7c2x881 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hrs82j61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fa44e86b0cd0646a44cbb116a7966932 nmdc:wfrbt-11-hrs82j61.1 +INFO:root:New activity id created for nmdc:omprc-11-a45knz19 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-51epev48.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac5947a5291f79f344ea638dfbcb54b0 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac5947a5291f79f344ea638dfbcb54b0 nmdc:dobj-11-5m9xd419 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73183cc428e2b062128517994681c81c +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73183cc428e2b062128517994681c81c nmdc:dobj-11-bbx18117 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac6f7a920edbaff4c13e5ba35ae0f157 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac6f7a920edbaff4c13e5ba35ae0f157 nmdc:dobj-11-ky860005 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5196ec0e821c81ff9e8fc20f28f59dfa +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5196ec0e821c81ff9e8fc20f28f59dfa nmdc:dobj-11-5ts08e06 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90af616b6d4a4deb155066d2d3893185 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90af616b6d4a4deb155066d2d3893185 nmdc:dobj-11-ph6rvn10 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1acae73389af5b10afe8892a92e501f4 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1acae73389af5b10afe8892a92e501f4 nmdc:dobj-11-6tvr0f04 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bf1b3c3b55909c2aee196a53a58042b +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bf1b3c3b55909c2aee196a53a58042b nmdc:dobj-11-83544979 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:edaf033d6dcb44365b1f615677195379 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:edaf033d6dcb44365b1f615677195379 nmdc:dobj-11-hb3bhe06 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f87518e05bad4c0186845612d0203be9 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-51epev48.1/nmdc_wfrbt-11-51epev48.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f87518e05bad4c0186845612d0203be9 nmdc:dobj-11-kzh2ay71 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-51epev48.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:09569ed1a3893ae1794594a607b3a533 nmdc:wfrbt-11-51epev48.1 +INFO:root:New activity id created for nmdc:omprc-11-a45knz19 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dj922986.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91241a3441221661499d49a875dc9668 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91241a3441221661499d49a875dc9668 nmdc:dobj-11-swh2fk05 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f33587bf961a9fa3d74e65b1e38bb939 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f33587bf961a9fa3d74e65b1e38bb939 nmdc:dobj-11-e20w6q09 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:faa6c8d896eea20426df420bd1df011f +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faa6c8d896eea20426df420bd1df011f nmdc:dobj-11-405kzb28 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d14578784d2e2cfa81e6a88e7fa40b7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d14578784d2e2cfa81e6a88e7fa40b7 nmdc:dobj-11-trpp1j12 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:428846c1cc124012f10a82b2437e130f +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:428846c1cc124012f10a82b2437e130f nmdc:dobj-11-9cbw3h20 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4574c77bffd5954ac1c6946d12a0833b +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4574c77bffd5954ac1c6946d12a0833b nmdc:dobj-11-n7b40s66 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:785fdcb2628153e77539a3419e4526b1 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:785fdcb2628153e77539a3419e4526b1 nmdc:dobj-11-7vysdb17 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f38ec84882ac41ed3696ebd438eb45e2 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f38ec84882ac41ed3696ebd438eb45e2 nmdc:dobj-11-pvcd5c98 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:514ff341732fb2537d330805a1e66e67 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-a45knz19/nmdc:wfrbt-11-dj922986.1/nmdc_wfrbt-11-dj922986.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:514ff341732fb2537d330805a1e66e67 nmdc:dobj-11-2evv8248 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-a45knz19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dj922986.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e84ddf639f384a465187790f912b9413 nmdc:wfrbt-11-dj922986.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-a45knz19 +INFO:root:omics_processing_id: nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:39b73cafb6476a8a45388fb7ea1cacfc nmdc:dobj-11-5xxheg33 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-rywm8f71 +INFO:root:New activity id created for nmdc:omprc-11-rywm8f71 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-p6stwx14.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrqc-11-p6stwx14.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:179db7858d72353b1a067cc4239c852c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrqc-11-p6stwx14.1/nmdc_wfrqc-11-p6stwx14.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:179db7858d72353b1a067cc4239c852c nmdc:dobj-11-4z8q7q88 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p6stwx14.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0968965db4f38b31ff41c68350741aff +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrqc-11-p6stwx14.1/nmdc_wfrqc-11-p6stwx14.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0968965db4f38b31ff41c68350741aff nmdc:dobj-11-dm9jvx42 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-p6stwx14.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fc86db3a92fe04c92523d1a883adacb4 nmdc:wfrqc-11-p6stwx14.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-rywm8f71 +INFO:root:New activity id created for nmdc:omprc-11-rywm8f71 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-sq1hqk10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfmgas-11-sq1hqk10.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93014ac73ae6b72053b8f5d61cf93987 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfmgas-11-sq1hqk10.1/nmdc_wfmgas-11-sq1hqk10.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93014ac73ae6b72053b8f5d61cf93987 nmdc:dobj-11-hky2j881 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sq1hqk10.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d6b9f79e997994f4b7563c6116342cc +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfmgas-11-sq1hqk10.1/nmdc_wfmgas-11-sq1hqk10.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d6b9f79e997994f4b7563c6116342cc nmdc:dobj-11-hr4md734 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sq1hqk10.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8460acbbbfb010be79ae976fff657987 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfmgas-11-sq1hqk10.1/nmdc_wfmgas-11-sq1hqk10.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8460acbbbfb010be79ae976fff657987 nmdc:dobj-11-bf58ev62 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-sq1hqk10.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f40376be50ce365eda4d6d3e71bd62d1 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfmgas-11-sq1hqk10.1/nmdc_wfmgas-11-sq1hqk10.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f40376be50ce365eda4d6d3e71bd62d1 nmdc:dobj-11-fns8ra52 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrbt-11-9x996895.1/nmdc_wfrbt-11-9x996895.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e00c0ae1355664bf5977fbf14d432d87 nmdc:dobj-11-rzp7js69 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9x996895.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:787791ae78d13ba436650c60ad590cc9 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrbt-11-9x996895.1/nmdc_wfrbt-11-9x996895.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:787791ae78d13ba436650c60ad590cc9 nmdc:dobj-11-3ypm4z54 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-rywm8f71 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrbt-11-9x996895.1/nmdc_wfrbt-11-9x996895.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:915f826d7128d9d05554897a77fe9d0f nmdc:dobj-11-xewjaz85 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9x996895.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f8a92229c0f67f242db307b234ef984 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrbt-11-9x996895.1/nmdc_wfrbt-11-9x996895.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f8a92229c0f67f242db307b234ef984 nmdc:dobj-11-qsmybg43 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9x996895.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3194acfd2cc0afe543addd11f4b8ad11 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrbt-11-9x996895.1/nmdc_wfrbt-11-9x996895.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3194acfd2cc0afe543addd11f4b8ad11 nmdc:dobj-11-k8jxt442 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9x996895.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c90fbed739e4d08902547e05819c14cf +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrbt-11-9x996895.1/nmdc_wfrbt-11-9x996895.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c90fbed739e4d08902547e05819c14cf nmdc:dobj-11-xp8z7046 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9x996895.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a853aef448a75780eeb3744297c0758b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rywm8f71/nmdc:wfrbt-11-9x996895.1/nmdc_wfrbt-11-9x996895.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a853aef448a75780eeb3744297c0758b nmdc:dobj-11-qwbe3g50 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-rywm8f71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-9x996895.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fc86db3a92fe04c92523d1a883adacb4 nmdc:wfrbt-11-9x996895.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-rywm8f71 +INFO:root:omics_processing_id: nmdc:omprc-11-jsd04s96 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa4e5b34cc9ce179d4a384965958c9d5 nmdc:dobj-11-2emj3j08 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f6f7718bdcc88c970570a05fba9cb81 nmdc:dobj-11-cjgx1a57 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-jsd04s96 +INFO:root:New activity id created for nmdc:omprc-11-jsd04s96 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-b7vmkg70.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jsd04s96/nmdc:wfrqc-11-b7vmkg70.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f2d1ca4660568e0a8d6a3f841599bcac +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jsd04s96/nmdc:wfrqc-11-b7vmkg70.1/nmdc_wfrqc-11-b7vmkg70.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2d1ca4660568e0a8d6a3f841599bcac nmdc:dobj-11-bct96w10 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-jsd04s96 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b7vmkg70.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:73775e4e61c83cf56d20aa4bd2955fcf +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jsd04s96/nmdc:wfrqc-11-b7vmkg70.1/nmdc_wfrqc-11-b7vmkg70.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:73775e4e61c83cf56d20aa4bd2955fcf nmdc:dobj-11-77gzyt76 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-jsd04s96 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b7vmkg70.1_filterStats.txt 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nmdc:6ac91b26a5f0686eb9ddbaf5c427a76a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jsd04s96/nmdc:wfrqc-11-wexj7y36.1/nmdc_wfrqc-11-wexj7y36.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ac91b26a5f0686eb9ddbaf5c427a76a nmdc:dobj-11-y08dbv86 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-jsd04s96 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wexj7y36.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d572edff3ea3494589a5b16e87aeca04 nmdc:wfrqc-11-wexj7y36.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-jsd04s96 +INFO:root:New activity id created for nmdc:omprc-11-jsd04s96 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8h7xtx18.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jsd04s96/nmdc:wfmgas-11-8h7xtx18.1 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file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-34xpn880/nmdc:wfrbt-11-0jh8h965.1/nmdc_wfrbt-11-0jh8h965.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:286ed2b5f832c8c5ed263b42916e529a nmdc:dobj-11-bk6d2t98 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-34xpn880 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0jh8h965.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65ff89f90b660ab72d4e3b2439f54c67 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-34xpn880/nmdc:wfrbt-11-0jh8h965.1/nmdc_wfrbt-11-0jh8h965.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65ff89f90b660ab72d4e3b2439f54c67 nmdc:dobj-11-zbnc0h98 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-34xpn880 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0jh8h965.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:092a15cf325d937662eaae27e568002d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-34xpn880/nmdc:wfrbt-11-0jh8h965.1/nmdc_wfrbt-11-0jh8h965.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:092a15cf325d937662eaae27e568002d nmdc:dobj-11-mfgra426 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-34xpn880 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0jh8h965.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:078a917192efc6b1c0d8ed09ba85c1e2 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: 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nmdc_wfrbt-11-0jh8h965.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c3717549e325835e27da439b43d12e3 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-34xpn880/nmdc:wfrbt-11-0jh8h965.1/nmdc_wfrbt-11-0jh8h965.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c3717549e325835e27da439b43d12e3 nmdc:dobj-11-b14bxe22 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-34xpn880 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0jh8h965.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:86ff61ecabbb7e9909006b2dd4e20702 nmdc:wfrbt-11-0jh8h965.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-34xpn880 +INFO:root:omics_processing_id: nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fdead54cfa9e0a4028cf5b083ce0ac96 nmdc:dobj-11-rxfzns13 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a9309513669d3c206b723520e884d35 nmdc:dobj-11-d8054j45 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-x55c0448 +INFO:root:New activity id created for nmdc:omprc-11-x55c0448 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-s7k7fg78.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrqc-11-s7k7fg78.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:29f317309051714b73745874499cb356 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrqc-11-s7k7fg78.1/nmdc_wfrqc-11-s7k7fg78.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:29f317309051714b73745874499cb356 nmdc:dobj-11-rsb1f530 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-s7k7fg78.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d25dbb1787a5da2ed8009e2d1a465074 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrqc-11-s7k7fg78.1/nmdc_wfrqc-11-s7k7fg78.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d25dbb1787a5da2ed8009e2d1a465074 nmdc:dobj-11-cpj81r58 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-s7k7fg78.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0921ec06c8cee6d6960b1dd3b67d7499 nmdc:wfrqc-11-s7k7fg78.1 +INFO:root:New activity id created for nmdc:omprc-11-x55c0448 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-05wjr859.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrqc-11-05wjr859.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d58f1225c461a7375a39c51d5473818 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrqc-11-05wjr859.1/nmdc_wfrqc-11-05wjr859.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d58f1225c461a7375a39c51d5473818 nmdc:dobj-11-mp4j2r59 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-05wjr859.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb5aba19439fb84c8a986e5034ee2076 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrqc-11-05wjr859.1/nmdc_wfrqc-11-05wjr859.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb5aba19439fb84c8a986e5034ee2076 nmdc:dobj-11-7h7fwh87 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-05wjr859.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bcd06db0a5a4b6dc636e1b2785304db9 nmdc:wfrqc-11-05wjr859.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-x55c0448 +INFO:root:New activity id created for nmdc:omprc-11-x55c0448 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7watzv85.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfmgas-11-7watzv85.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16a6ef078d2def794945ba75aa89e7e6 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfmgas-11-7watzv85.1/nmdc_wfmgas-11-7watzv85.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16a6ef078d2def794945ba75aa89e7e6 nmdc:dobj-11-8e2ftb87 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7watzv85.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b66d533844513678ed71c89bfe53a4cf +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfmgas-11-7watzv85.1/nmdc_wfmgas-11-7watzv85.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b66d533844513678ed71c89bfe53a4cf nmdc:dobj-11-kdq25n62 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7watzv85.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c6756ce52402752be5b84f0fc0fa3e11 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfmgas-11-7watzv85.1/nmdc_wfmgas-11-7watzv85.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c6756ce52402752be5b84f0fc0fa3e11 nmdc:dobj-11-4ky88f67 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7watzv85.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f512f4cb06f483a8355b0fd9fff03759 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfmgas-11-7watzv85.1/nmdc_wfmgas-11-7watzv85.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f512f4cb06f483a8355b0fd9fff03759 nmdc:dobj-11-8x9vhk61 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7watzv85.1_assembly.agp 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scaffold fasta for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9m7e0715.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43477c6185d4d8e46d7fe19a851f4136 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfmgas-11-9m7e0715.1/nmdc_wfmgas-11-9m7e0715.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43477c6185d4d8e46d7fe19a851f4136 nmdc:dobj-11-rk9c2q24 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-9m7e0715.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7af691cb976340daeb67a1f2c56eba57 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfmgas-11-9m7e0715.1/nmdc_wfmgas-11-9m7e0715.1_assembly.agp 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nmdc:wfmgas-11-9m7e0715.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-x55c0448 +INFO:root:New activity id created for nmdc:omprc-11-x55c0448 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-0nd9zc26.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:001ee58788a573c4615b858a465ffc9e +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:001ee58788a573c4615b858a465ffc9e nmdc:dobj-11-azfcez36 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:87d46408dc9b5fafc4065f905f1ce3f4 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:87d46408dc9b5fafc4065f905f1ce3f4 nmdc:dobj-11-ex6krs56 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a23a4f43550d3f8ef2f44002f26e5d12 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a23a4f43550d3f8ef2f44002f26e5d12 nmdc:dobj-11-x8xpn091 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46cdbafd47c3dcf75ee51e0a7d6e3202 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46cdbafd47c3dcf75ee51e0a7d6e3202 nmdc:dobj-11-q1mvfc07 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c73e6842d940d6fae85c1301cf1c2591 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c73e6842d940d6fae85c1301cf1c2591 nmdc:dobj-11-wwswbb46 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1134d70916578b1742117cafa6a1117 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1134d70916578b1742117cafa6a1117 nmdc:dobj-11-g3p6j083 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b4113a6cadf78aef37a31d65ff8a3e59 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b4113a6cadf78aef37a31d65ff8a3e59 nmdc:dobj-11-47vjaw16 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7c5c4410217df82d1a328ff731cf6c6 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7c5c4410217df82d1a328ff731cf6c6 nmdc:dobj-11-nh999022 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f814c23297d4a0161775c6919aea15aa +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-0nd9zc26.1/nmdc_wfrbt-11-0nd9zc26.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f814c23297d4a0161775c6919aea15aa nmdc:dobj-11-gt3jve61 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0nd9zc26.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0921ec06c8cee6d6960b1dd3b67d7499 nmdc:wfrbt-11-0nd9zc26.1 +INFO:root:New activity id created for nmdc:omprc-11-x55c0448 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-hmjxxp54.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-hmjxxp54.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3df0ce0c04a029220923d1555091cdb +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-hmjxxp54.1/nmdc_wfrbt-11-hmjxxp54.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3df0ce0c04a029220923d1555091cdb nmdc:dobj-11-679aph09 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hmjxxp54.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc0c8155b006cbd4c494a6dc8d4e1511 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-hmjxxp54.1/nmdc_wfrbt-11-hmjxxp54.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc0c8155b006cbd4c494a6dc8d4e1511 nmdc:dobj-11-0qctfd73 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hmjxxp54.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9071f38230f319801f497c8cdc5cca1d +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-hmjxxp54.1/nmdc_wfrbt-11-hmjxxp54.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9071f38230f319801f497c8cdc5cca1d nmdc:dobj-11-2xbt2337 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hmjxxp54.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40d561e189fe05d781b6b365edf04b65 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-hmjxxp54.1/nmdc_wfrbt-11-hmjxxp54.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40d561e189fe05d781b6b365edf04b65 nmdc:dobj-11-xxjtkn55 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hmjxxp54.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:95fd640e6025e281301ec0fd2a32edff +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-hmjxxp54.1/nmdc_wfrbt-11-hmjxxp54.1_centrifuge_report.tsv 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file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-hmjxxp54.1/nmdc_wfrbt-11-hmjxxp54.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:557f81503a3da8a9bb8b6aa2bb5c02e9 nmdc:dobj-11-vt6zdw67 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-x55c0448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hmjxxp54.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61ce3d9bb63fe24e9a9fcf4d7154f7d9 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x55c0448/nmdc:wfrbt-11-hmjxxp54.1/nmdc_wfrbt-11-hmjxxp54.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61ce3d9bb63fe24e9a9fcf4d7154f7d9 nmdc:dobj-11-ypev1k88 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7rcsbx13/nmdc:wfrbt-11-vbdkwp73.1/nmdc_wfrbt-11-vbdkwp73.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aef5e833c1e2162b79a6a6bd0e7e8919 nmdc:dobj-11-a1thec29 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-7rcsbx13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbdkwp73.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6fa40bf5f953c87289535fcf992a216c +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7rcsbx13/nmdc:wfrbt-11-vbdkwp73.1/nmdc_wfrbt-11-vbdkwp73.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fa40bf5f953c87289535fcf992a216c nmdc:dobj-11-b4f6kp77 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-7rcsbx13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbdkwp73.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7f1a3cd41ee560932207eb7cbd5b6b4d +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7rcsbx13/nmdc:wfrbt-11-vbdkwp73.1/nmdc_wfrbt-11-vbdkwp73.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f1a3cd41ee560932207eb7cbd5b6b4d nmdc:dobj-11-0p55pt76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-7rcsbx13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbdkwp73.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:055908b4c6f6325129e13b8c82056e1a +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7rcsbx13/nmdc:wfrbt-11-vbdkwp73.1/nmdc_wfrbt-11-vbdkwp73.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:055908b4c6f6325129e13b8c82056e1a nmdc:dobj-11-t8kz6f52 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-7rcsbx13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbdkwp73.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3d1c29fd96b731947fc13cfba9807d7 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7rcsbx13/nmdc:wfrbt-11-vbdkwp73.1/nmdc_wfrbt-11-vbdkwp73.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b3d1c29fd96b731947fc13cfba9807d7 nmdc:dobj-11-t2hv2f17 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-7rcsbx13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbdkwp73.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f9f67fcb12c9dc2f90b3ac8c5040ac61 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7rcsbx13/nmdc:wfrbt-11-vbdkwp73.1/nmdc_wfrbt-11-vbdkwp73.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f9f67fcb12c9dc2f90b3ac8c5040ac61 nmdc:dobj-11-aa6ebz86 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-7rcsbx13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbdkwp73.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21fc35f34ed56d42e7bd7b6f8c20f4c0 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7rcsbx13/nmdc:wfrbt-11-vbdkwp73.1/nmdc_wfrbt-11-vbdkwp73.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21fc35f34ed56d42e7bd7b6f8c20f4c0 nmdc:dobj-11-bc87hq67 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-7rcsbx13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vbdkwp73.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5d5d69db03bce43dbfee5a0d4c92389e nmdc:wfrbt-11-vbdkwp73.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-7rcsbx13 +INFO:root:omics_processing_id: nmdc:omprc-11-2y4qrr86 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:abd4e5c6d92c516e6f03388344dfdc3e nmdc:dobj-11-4tvrad08 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3fc0a844c61b2ac69cfa447b7a96a56 nmdc:dobj-11-1qwv5a04 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:28aec91bd850fa546e3fc73f35d85c09 nmdc:dobj-11-mdv3tp43 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-2y4qrr86 +INFO:root:New activity id created for nmdc:omprc-11-2y4qrr86 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5n63h090.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-5n63h090.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8395b927d5709ef41d1d7102616ec0a5 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-5n63h090.1/nmdc_wfrqc-11-5n63h090.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8395b927d5709ef41d1d7102616ec0a5 nmdc:dobj-11-621hdz34 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-2y4qrr86 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5n63h090.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46bbdfbb6a4871b59217eb2a6c0d9303 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-5n63h090.1/nmdc_wfrqc-11-5n63h090.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46bbdfbb6a4871b59217eb2a6c0d9303 nmdc:dobj-11-e341v209 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-2y4qrr86 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5n63h090.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:8554e95badc543f4d338c7368a3023da nmdc:wfrqc-11-5n63h090.1 +INFO:root:New activity id created for nmdc:omprc-11-2y4qrr86 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8ebera57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-8ebera57.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f222cfbf22df7b35aea146164ba6c742 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-8ebera57.1/nmdc_wfrqc-11-8ebera57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f222cfbf22df7b35aea146164ba6c742 nmdc:dobj-11-8kr6fe04 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-2y4qrr86 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8ebera57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56bdf4e9f0327ac72c45c71aa776bf9b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-8ebera57.1/nmdc_wfrqc-11-8ebera57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56bdf4e9f0327ac72c45c71aa776bf9b nmdc:dobj-11-b1y21182 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-2y4qrr86 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8ebera57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ba2ec926a19b7e68a3f581bf48cc48df nmdc:wfrqc-11-8ebera57.1 +INFO:root:New activity id created for nmdc:omprc-11-2y4qrr86 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-b8xshw88.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-b8xshw88.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f260d95a968629d937fbb0e11efa8b4d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-b8xshw88.1/nmdc_wfrqc-11-b8xshw88.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f260d95a968629d937fbb0e11efa8b4d nmdc:dobj-11-aaqm9g75 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-2y4qrr86 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-b8xshw88.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02eb9716b3a07f7c695749ebec90c8de +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2y4qrr86/nmdc:wfrqc-11-b8xshw88.1/nmdc_wfrqc-11-b8xshw88.1_filterStats.txt 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+INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p3ksqp19/nmdc:wfrbt-11-679k3e93.1/nmdc_wfrbt-11-679k3e93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:68220055de6cd58d4331452c14e5231d nmdc:dobj-11-0hds9p73 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-p3ksqp19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-679k3e93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fac015775c319cc8ca216d7d93804bea nmdc:wfrbt-11-679k3e93.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-p3ksqp19 +INFO:root:omics_processing_id: nmdc:omprc-11-4k7jyr13 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c82b94f34e1f3fb67754bcb1852f1ce1 nmdc:dobj-11-c5ppz936 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-4k7jyr13/nmdc:wfrqc-11-5mczdb30.1/nmdc_wfrqc-11-5mczdb30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53c67e834ddcad01bea5ee2369876dd6 nmdc:dobj-11-qwj8yr45 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4k7jyr13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5mczdb30.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:c1fc00c7c796fa2e8875a575bd534cb6 nmdc:wfrqc-11-5mczdb30.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-4k7jyr13 +INFO:root:New activity id created for nmdc:omprc-11-4k7jyr13 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8028a714.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4k7jyr13/nmdc:wfmgas-11-8028a714.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ccc299d9ee7ba3ea16de406e2cd0e7b +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4k7jyr13/nmdc:wfmgas-11-8028a714.1/nmdc_wfmgas-11-8028a714.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ccc299d9ee7ba3ea16de406e2cd0e7b nmdc:dobj-11-m1jtda47 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-4k7jyr13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8028a714.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59efca44139e1eb56f8e9b9bdc784776 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4k7jyr13/nmdc:wfmgas-11-8028a714.1/nmdc_wfmgas-11-8028a714.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59efca44139e1eb56f8e9b9bdc784776 nmdc:dobj-11-28dxn938 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-4k7jyr13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8028a714.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89c9956a057bdd41107cf34d32dac86e +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4k7jyr13/nmdc:wfmgas-11-8028a714.1/nmdc_wfmgas-11-8028a714.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89c9956a057bdd41107cf34d32dac86e nmdc:dobj-11-0fk3rv20 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-4k7jyr13 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8028a714.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b096bbd59b95ec086a8eb4efaf75544 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4k7jyr13/nmdc:wfmgas-11-8028a714.1/nmdc_wfmgas-11-8028a714.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b096bbd59b95ec086a8eb4efaf75544 nmdc:dobj-11-gppvbw31 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Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2wqcm476/nmdc:wfrqc-11-95twm927.1/nmdc_wfrqc-11-95twm927.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc19bb4a0108fd030520095848c9d432 nmdc:dobj-11-aav1c413 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-2wqcm476 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-95twm927.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d154bc27eedca791e3424b5515bd16c4 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2wqcm476/nmdc:wfrqc-11-95twm927.1/nmdc_wfrqc-11-95twm927.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d154bc27eedca791e3424b5515bd16c4 nmdc:dobj-11-03yx7368 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-2wqcm476 +INFO:nmdc_automation.re_iding.base:new_filename: 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contigs fasta for nmdc:omprc-11-2wqcm476 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bx3vcx11.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7b2160d831849d13e099e93ab970c60 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2wqcm476/nmdc:wfmgas-11-bx3vcx11.1/nmdc_wfmgas-11-bx3vcx11.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7b2160d831849d13e099e93ab970c60 nmdc:dobj-11-c5rj2596 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-2wqcm476 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bx3vcx11.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e0a4d36acfc83376f4eddb489ab0191 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2wqcm476/nmdc:wfmgas-11-bx3vcx11.1/nmdc_wfmgas-11-bx3vcx11.1_covstats.txt 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-49nftm85/nmdc:wfmgas-11-ntgq2n34.1/nmdc_wfmgas-11-ntgq2n34.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2151cbb356c5e90567a3b2e7b8615ccb nmdc:dobj-11-taentw86 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-49nftm85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ntgq2n34.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7a32878eb787ef7db81600894d608e4c +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-49nftm85/nmdc:wfmgas-11-ntgq2n34.1/nmdc_wfmgas-11-ntgq2n34.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7a32878eb787ef7db81600894d608e4c nmdc:dobj-11-2c76x978 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-49nftm85 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ntgq2n34.1_assembly.agp 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activity id created for nmdc:omprc-11-8qhsnz20 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-t2bd4m08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8qhsnz20/nmdc:wfrqc-11-t2bd4m08.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:87b6740e8f562ed20c8f283e90fab6a4 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8qhsnz20/nmdc:wfrqc-11-t2bd4m08.1/nmdc_wfrqc-11-t2bd4m08.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:87b6740e8f562ed20c8f283e90fab6a4 nmdc:dobj-11-ejn8ry18 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8qhsnz20 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-t2bd4m08.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac25eb3b209a812c48d254eb4210dea2 +INFO:root:New file path computed for QC Statistics: 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+INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46c40ab1535175f121438308bc58990e +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfmgas-11-gbac8k95.1/nmdc_wfmgas-11-gbac8k95.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46c40ab1535175f121438308bc58990e nmdc:dobj-11-yy7mzv27 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gbac8k95.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:08f80d16e8408d02f7e478c23c4802c9 nmdc:wfmgas-11-gbac8k95.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-gnbmya80 +INFO:root:New activity id created for nmdc:omprc-11-gnbmya80 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-h4kq0s69.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:33451bb9f09be92b0f5370e879979ba7 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33451bb9f09be92b0f5370e879979ba7 nmdc:dobj-11-jwsjmf51 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ab9ee60742d5d68ce596f17b2b75019 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ab9ee60742d5d68ce596f17b2b75019 nmdc:dobj-11-7pe60m50 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:631a43f9d2ce3372d4e08538cde1d99e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:631a43f9d2ce3372d4e08538cde1d99e nmdc:dobj-11-sdfq6014 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:271e5260588370dfe462533dbbf6dad4 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:271e5260588370dfe462533dbbf6dad4 nmdc:dobj-11-t8hqj618 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1e3653333f302a46c242924edff2789 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1e3653333f302a46c242924edff2789 nmdc:dobj-11-bxh3ka63 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:24297ac740e69945cfdbde621cc1b0bd +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24297ac740e69945cfdbde621cc1b0bd nmdc:dobj-11-09d7xd76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7fdbb7814b41e6c7bbe86e847e0b5ac0 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fdbb7814b41e6c7bbe86e847e0b5ac0 nmdc:dobj-11-szzv7e59 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26bc20c51f56b65521fd7eb813eb6108 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26bc20c51f56b65521fd7eb813eb6108 nmdc:dobj-11-sjx5xt49 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a751f6a6ae1cf4942268737a96a04e9f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-h4kq0s69.1/nmdc_wfrbt-11-h4kq0s69.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a751f6a6ae1cf4942268737a96a04e9f nmdc:dobj-11-jhe0ck29 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4kq0s69.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:451f8e2729c3146b5a81eafedc3b6519 nmdc:wfrbt-11-h4kq0s69.1 +INFO:root:New activity id created for nmdc:omprc-11-gnbmya80 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-0rvsxq41.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:55cbed467916f96bf8352d2f71259163 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:55cbed467916f96bf8352d2f71259163 nmdc:dobj-11-23tddj89 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2911be7d9ea006bf527b2d497ef5b9b3 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2911be7d9ea006bf527b2d497ef5b9b3 nmdc:dobj-11-f0dfhn63 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a36586e2554fb7e740f15936d2923fc7 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a36586e2554fb7e740f15936d2923fc7 nmdc:dobj-11-400f3m60 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4267770a04068851c98b7190bb6b5337 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4267770a04068851c98b7190bb6b5337 nmdc:dobj-11-n2wycm90 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91dd416472081c2563c414ff4e7d06f5 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91dd416472081c2563c414ff4e7d06f5 nmdc:dobj-11-x9rpk868 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94ddc7c2997475607fbe1445f81c7add +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94ddc7c2997475607fbe1445f81c7add nmdc:dobj-11-5na80v77 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b2b7cfeeba348396bfef0618aa04008 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b2b7cfeeba348396bfef0618aa04008 nmdc:dobj-11-zrb41c54 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09eb1af0ddbaaa2c0174445d9290950a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09eb1af0ddbaaa2c0174445d9290950a nmdc:dobj-11-g1efc648 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b757c6461a7f831399be56aceda391c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gnbmya80/nmdc:wfrbt-11-0rvsxq41.1/nmdc_wfrbt-11-0rvsxq41.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b757c6461a7f831399be56aceda391c nmdc:dobj-11-n7vxgg27 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gnbmya80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0rvsxq41.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:732105719c84f5c3f83413dd7a3414b7 nmdc:wfrbt-11-0rvsxq41.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gnbmya80 +INFO:root:omics_processing_id: nmdc:omprc-11-azk19n22 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18f3ec8f3650cdc2da476eb7b972fa0b nmdc:dobj-11-jsb61t77 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:97e70a9409f26e7809b24c754d103d31 nmdc:dobj-11-jtj85t20 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-azk19n22 +INFO:root:New activity id created for nmdc:omprc-11-azk19n22 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-54n3p532.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-azk19n22/nmdc:wfrqc-11-54n3p532.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3ac92ed44dcc7d0c7acfab5d2159be0 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-azk19n22/nmdc:wfrqc-11-54n3p532.1/nmdc_wfrqc-11-54n3p532.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3ac92ed44dcc7d0c7acfab5d2159be0 nmdc:dobj-11-3c5dm509 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-azk19n22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-54n3p532.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db7131b89f0d07222f133271a0209344 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-azk19n22/nmdc:wfrqc-11-54n3p532.1/nmdc_wfrqc-11-54n3p532.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db7131b89f0d07222f133271a0209344 nmdc:dobj-11-7weagy56 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-azk19n22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-54n3p532.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e3014fc8e57026e111e4c4edab3fb641 nmdc:wfrqc-11-54n3p532.1 +INFO:root:New activity id created for nmdc:omprc-11-azk19n22 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-85frrq37.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-azk19n22/nmdc:wfrqc-11-85frrq37.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a35785b1b34f0bf73e239c310f6d6392 +INFO:root:New file path 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a800e93838486648219e9d32a5ff8efe nmdc:dobj-11-q3xy1k33 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:911a69d1f6061327e2132680078c2432 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-ky2s1j42.1/nmdc_wfrbt-11-ky2s1j42.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:911a69d1f6061327e2132680078c2432 nmdc:dobj-11-1zxg2t93 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cf6406c4b1768cb6e3f8a380eb8a00b3 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-ky2s1j42.1/nmdc_wfrbt-11-ky2s1j42.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf6406c4b1768cb6e3f8a380eb8a00b3 nmdc:dobj-11-3r1drw94 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e14f2cb488f6671be46795bea6bd4f5 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-ky2s1j42.1/nmdc_wfrbt-11-ky2s1j42.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e14f2cb488f6671be46795bea6bd4f5 nmdc:dobj-11-1zy9hb80 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:93d12570655f80bc3f490f070c42e45f +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-ky2s1j42.1/nmdc_wfrbt-11-ky2s1j42.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93d12570655f80bc3f490f070c42e45f nmdc:dobj-11-nvg68220 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ef7655eb0d6dd15eebb4405d1a1f4705 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-ky2s1j42.1/nmdc_wfrbt-11-ky2s1j42.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef7655eb0d6dd15eebb4405d1a1f4705 nmdc:dobj-11-er986h59 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:143f9f11f841a3cf1e3beda1950b1032 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-ky2s1j42.1/nmdc_wfrbt-11-ky2s1j42.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:143f9f11f841a3cf1e3beda1950b1032 nmdc:dobj-11-ettrgf14 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d69eb454eb7c8680aac9865f02c797a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-ky2s1j42.1/nmdc_wfrbt-11-ky2s1j42.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d69eb454eb7c8680aac9865f02c797a nmdc:dobj-11-jy1x0z70 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3febf30ae89f0b746361b531070a894f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-ky2s1j42.1/nmdc_wfrbt-11-ky2s1j42.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3febf30ae89f0b746361b531070a894f nmdc:dobj-11-8s48va68 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ky2s1j42.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:101a13dc5d4028bb940eb79615b2f20d nmdc:wfrbt-11-ky2s1j42.1 +INFO:root:New activity id created for nmdc:omprc-11-9wk9qh61 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-fqnkj855.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d7f2b31993abdd317c2bd444283ce810 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7f2b31993abdd317c2bd444283ce810 nmdc:dobj-11-v5xkdg78 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:962a76012d44af19144ae0df83082ca3 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:962a76012d44af19144ae0df83082ca3 nmdc:dobj-11-9d4gy191 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:332884b0be2c6e82aaf234abfa100d2b +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:332884b0be2c6e82aaf234abfa100d2b nmdc:dobj-11-v3a4w223 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fc7ed022c253531c7fa5b39db03c7c7c +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc7ed022c253531c7fa5b39db03c7c7c nmdc:dobj-11-1c3r9v67 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1015b68652afd91624195dec75f53ab5 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1015b68652afd91624195dec75f53ab5 nmdc:dobj-11-xcmna751 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2ab3080d37763d5e517e7c0afb78afaf +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ab3080d37763d5e517e7c0afb78afaf nmdc:dobj-11-hwfbyp46 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a4b6d104860983344aeb5b17737577da +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4b6d104860983344aeb5b17737577da nmdc:dobj-11-akx4zf41 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a8f4dda2ccb7fb01c456de4d142a2ac +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a8f4dda2ccb7fb01c456de4d142a2ac nmdc:dobj-11-7kt6tt81 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22fba5080e723555c175fb60ab4189d3 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9wk9qh61/nmdc:wfrbt-11-fqnkj855.1/nmdc_wfrbt-11-fqnkj855.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22fba5080e723555c175fb60ab4189d3 nmdc:dobj-11-y6jmvn97 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9wk9qh61 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-fqnkj855.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:92374cfd64926c5d29f536d81bbdc519 nmdc:wfrbt-11-fqnkj855.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9wk9qh61 +INFO:root:omics_processing_id: nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b6eba56c97490c4635ab176144b4d192 nmdc:dobj-11-n5p30r85 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:87dd0c207c8d8ed5f2658cd6b61d60ad nmdc:dobj-11-bbaxt296 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0adf8dc96aa5e36af1c7b810ff99ad02 nmdc:dobj-11-024v3x88 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-3aqzmw69 +INFO:root:New activity id created for nmdc:omprc-11-3aqzmw69 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2kq6pj06.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrqc-11-2kq6pj06.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6efd237f6feb3a6687c42c51dbbb256 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrqc-11-2kq6pj06.1/nmdc_wfrqc-11-2kq6pj06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6efd237f6feb3a6687c42c51dbbb256 nmdc:dobj-11-k9aq1g18 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2kq6pj06.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad7ab80257c838bc7ce4cfbf6bbf0269 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrqc-11-2kq6pj06.1/nmdc_wfrqc-11-2kq6pj06.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad7ab80257c838bc7ce4cfbf6bbf0269 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file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-6gwck985.1/nmdc_wfrbt-11-6gwck985.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40da19a141f742a56ed8bfff9c482cff nmdc:dobj-11-50r6ma54 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6gwck985.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56cd89bf7d9c630a5825945a691840b2 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-6gwck985.1/nmdc_wfrbt-11-6gwck985.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56cd89bf7d9c630a5825945a691840b2 nmdc:dobj-11-nwxs0h95 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6gwck985.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c5a8fee9652bbcb2b427b6bc18e6f0cf +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-6gwck985.1/nmdc_wfrbt-11-6gwck985.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5a8fee9652bbcb2b427b6bc18e6f0cf nmdc:dobj-11-xkaarh84 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6gwck985.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:335a22eb8f27ada8774308627cbb116e +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-6gwck985.1/nmdc_wfrbt-11-6gwck985.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:335a22eb8f27ada8774308627cbb116e nmdc:dobj-11-ysh0pw05 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6gwck985.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4f70994613bdea3766d4bec6a00ef7c +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-6gwck985.1/nmdc_wfrbt-11-6gwck985.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4f70994613bdea3766d4bec6a00ef7c nmdc:dobj-11-kqtjq734 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6gwck985.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:245aa6dbb31a3da369da57df30f055b6 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-6gwck985.1/nmdc_wfrbt-11-6gwck985.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:245aa6dbb31a3da369da57df30f055b6 nmdc:dobj-11-r860ba15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6gwck985.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1489b6535192e8c1436826a5e48220f3 nmdc:wfrbt-11-6gwck985.1 +INFO:root:New activity id created for nmdc:omprc-11-3aqzmw69 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-0ypa8c68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-0ypa8c68.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a61c995d6b56ddeb99e109303d6da31 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-0ypa8c68.1/nmdc_wfrbt-11-0ypa8c68.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a61c995d6b56ddeb99e109303d6da31 nmdc:dobj-11-mnznns95 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0ypa8c68.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85273a9bef597d5666e3c405dc2a8e67 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-0ypa8c68.1/nmdc_wfrbt-11-0ypa8c68.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85273a9bef597d5666e3c405dc2a8e67 nmdc:dobj-11-ew60qc86 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0ypa8c68.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3305ec687437fff478ebbc7c3231e69d +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-0ypa8c68.1/nmdc_wfrbt-11-0ypa8c68.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3305ec687437fff478ebbc7c3231e69d nmdc:dobj-11-je0r2n79 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0ypa8c68.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9083db852d4fd4f295227c86a95e16ff +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-0ypa8c68.1/nmdc_wfrbt-11-0ypa8c68.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9083db852d4fd4f295227c86a95e16ff nmdc:dobj-11-6xd98804 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0ypa8c68.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2034f73be7fde17d510e474b3de9171b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-0ypa8c68.1/nmdc_wfrbt-11-0ypa8c68.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2034f73be7fde17d510e474b3de9171b nmdc:dobj-11-j2bjc285 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-3aqzmw69 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ed158f485bcf6da018a8fc265e5d8a22 nmdc:dobj-11-56hbpa21 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0ypa8c68.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:af8aba36084200fec11e52b723436530 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-0ypa8c68.1/nmdc_wfrbt-11-0ypa8c68.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:af8aba36084200fec11e52b723436530 nmdc:dobj-11-w9b13636 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0ypa8c68.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc41ec7cfba4f2367444c1f5c923abcb +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-0ypa8c68.1/nmdc_wfrbt-11-0ypa8c68.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cc41ec7cfba4f2367444c1f5c923abcb nmdc:dobj-11-kckh6602 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0ypa8c68.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:b28927e0d3d78bf25c06adb1473fc5b1 nmdc:wfrbt-11-0ypa8c68.1 +INFO:root:New activity id created for nmdc:omprc-11-3aqzmw69 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-t5vdw320.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-t5vdw320.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2782e9f68cf4fe5fe1bd25a6e9c7655e +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-t5vdw320.1/nmdc_wfrbt-11-t5vdw320.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2782e9f68cf4fe5fe1bd25a6e9c7655e nmdc:dobj-11-esz82c76 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t5vdw320.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:08a52a70c2ceaa0f9642b11c4785157c +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-t5vdw320.1/nmdc_wfrbt-11-t5vdw320.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:08a52a70c2ceaa0f9642b11c4785157c nmdc:dobj-11-qx6y4e87 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-3aqzmw69 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nmdc:574275d79f81d6466b45a1775e387e66 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-t5vdw320.1/nmdc_wfrbt-11-t5vdw320.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:574275d79f81d6466b45a1775e387e66 nmdc:dobj-11-gw7skd72 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-3aqzmw69 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t5vdw320.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:27c5f41151e3699680638db042fa6b8d +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-3aqzmw69/nmdc:wfrbt-11-t5vdw320.1/nmdc_wfrbt-11-t5vdw320.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27c5f41151e3699680638db042fa6b8d nmdc:dobj-11-3f21gz06 +INFO:nmdc_automation.re_iding.base:new_description: 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file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g1xssd06/nmdc:wfrbt-11-jw35tx60.1/nmdc_wfrbt-11-jw35tx60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66c32dd5bf05a4c0b3117a25c0986c4f nmdc:dobj-11-38a6kv60 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-g1xssd06 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jw35tx60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d0d754a71be76562788c0bedc049b71a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g1xssd06/nmdc:wfrbt-11-jw35tx60.1/nmdc_wfrbt-11-jw35tx60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d0d754a71be76562788c0bedc049b71a nmdc:dobj-11-03jfza42 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-g1xssd06 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jw35tx60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:87bd794dee2fb3f5d95e83025c6fe933 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g1xssd06/nmdc:wfrbt-11-jw35tx60.1/nmdc_wfrbt-11-jw35tx60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:87bd794dee2fb3f5d95e83025c6fe933 nmdc:dobj-11-vbgtzw56 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g1xssd06 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jw35tx60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:35eda01e9d60cdfa570a3594218ca53d nmdc:wfrbt-11-jw35tx60.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-g1xssd06 +INFO:root:omics_processing_id: nmdc:omprc-11-q8cv8x70 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jzmz6271/nmdc:wfrbt-11-2x67nd21.1/nmdc_wfrbt-11-2x67nd21.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0244678b8a3e0a7102b3b93730e45212 nmdc:dobj-11-d607sz30 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-jzmz6271 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2x67nd21.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad7513125ada76a9f097edb8c7589630 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jzmz6271/nmdc:wfrbt-11-2x67nd21.1/nmdc_wfrbt-11-2x67nd21.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad7513125ada76a9f097edb8c7589630 nmdc:dobj-11-0stef254 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-jzmz6271 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nmdc_wfrbt-11-2x67nd21.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7f57a317d6309c139c8d92e3790e2b6 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jzmz6271/nmdc:wfrbt-11-2x67nd21.1/nmdc_wfrbt-11-2x67nd21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7f57a317d6309c139c8d92e3790e2b6 nmdc:dobj-11-w0v1xx49 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-jzmz6271 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-2x67nd21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80c35b73602f8e504fea7d994f4ae36a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jzmz6271/nmdc:wfrbt-11-2x67nd21.1/nmdc_wfrbt-11-2x67nd21.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject 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file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jzmz6271/nmdc:wfrbt-11-4msjxa38.1/nmdc_wfrbt-11-4msjxa38.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:baae431babdd566ef5a97b9f503d13d2 nmdc:dobj-11-3xqbvh97 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-jzmz6271 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4msjxa38.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6db3fb337debea2050b2e94174d00b1d +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jzmz6271/nmdc:wfrbt-11-4msjxa38.1/nmdc_wfrbt-11-4msjxa38.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6db3fb337debea2050b2e94174d00b1d nmdc:dobj-11-tr1x2f82 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-jzmz6271 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4msjxa38.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5a4a3a35749e00a01f3f8d87bd866ed +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-jzmz6271/nmdc:wfrbt-11-4msjxa38.1/nmdc_wfrbt-11-4msjxa38.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5a4a3a35749e00a01f3f8d87bd866ed nmdc:dobj-11-6p26e634 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-jzmz6271 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4msjxa38.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7d4921c091736a97916f5e2d24730951 nmdc:wfrbt-11-4msjxa38.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-jzmz6271 +INFO:root:omics_processing_id: nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd0f350e3ce5c7589b9270271eaec619 nmdc:dobj-11-0x2an995 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-j8039c34 +INFO:root:New activity id created for nmdc:omprc-11-j8039c34 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2870x276.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrqc-11-2870x276.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36e420ca523418cda6008cc47241221f +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrqc-11-2870x276.1/nmdc_wfrqc-11-2870x276.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36e420ca523418cda6008cc47241221f nmdc:dobj-11-rp0v5230 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2870x276.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43f24b218fad596e83bd9f3a53a73c41 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrqc-11-2870x276.1/nmdc_wfrqc-11-2870x276.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43f24b218fad596e83bd9f3a53a73c41 nmdc:dobj-11-edy2q103 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2870x276.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:89d6d135010e55068c1e62f51df114b7 nmdc:wfrqc-11-2870x276.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-j8039c34 +INFO:root:New activity id created for nmdc:omprc-11-j8039c34 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wn0jty12.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfmgas-11-wn0jty12.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad9d37fd4ec5a647b40c61f561e39692 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfmgas-11-wn0jty12.1/nmdc_wfmgas-11-wn0jty12.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad9d37fd4ec5a647b40c61f561e39692 nmdc:dobj-11-86v63r67 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wn0jty12.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:223331a375dddde1360ea606ac5ab5f3 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfmgas-11-wn0jty12.1/nmdc_wfmgas-11-wn0jty12.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:223331a375dddde1360ea606ac5ab5f3 nmdc:dobj-11-red1k258 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wn0jty12.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50cf2ae224585cd107a1d35e744ec903 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfmgas-11-wn0jty12.1/nmdc_wfmgas-11-wn0jty12.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50cf2ae224585cd107a1d35e744ec903 nmdc:dobj-11-xk6gew17 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wn0jty12.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:941bce051475bf0771b6ed6a5b4509ed +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfmgas-11-wn0jty12.1/nmdc_wfmgas-11-wn0jty12.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:941bce051475bf0771b6ed6a5b4509ed nmdc:dobj-11-vhp3mf49 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wn0jty12.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad6c182500689538e3e021c2694d918f +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfmgas-11-wn0jty12.1/nmdc_wfmgas-11-wn0jty12.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad6c182500689538e3e021c2694d918f nmdc:dobj-11-59ghs041 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wn0jty12.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:89d6d135010e55068c1e62f51df114b7 nmdc:wfmgas-11-wn0jty12.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-j8039c34 +INFO:root:New activity id created for nmdc:omprc-11-j8039c34 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-qyham857.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60329707c759efa59ac861d1a2fb5fc2 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60329707c759efa59ac861d1a2fb5fc2 nmdc:dobj-11-87dvpt75 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e32151bd64ed5b8f5fc3b394fb984afa +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e32151bd64ed5b8f5fc3b394fb984afa nmdc:dobj-11-2cs19q52 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4881e51eaa3972d0dbe57abaae4e46a +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4881e51eaa3972d0dbe57abaae4e46a nmdc:dobj-11-7zpf0k29 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5cdea4fa5b92c1742802b4aa429cf19 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5cdea4fa5b92c1742802b4aa429cf19 nmdc:dobj-11-xwazwt86 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a11db17c58fc3829d0a7800223cb587d +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a11db17c58fc3829d0a7800223cb587d nmdc:dobj-11-ba22fq05 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86103c1db1ad3fa4d2b8f7e1a5706bdf +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86103c1db1ad3fa4d2b8f7e1a5706bdf nmdc:dobj-11-pk1jct64 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:00077b9d814de926dd293ccada05a551 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00077b9d814de926dd293ccada05a551 nmdc:dobj-11-j1dzat68 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:af517dd8a5f2338e83121a4928a7b671 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:af517dd8a5f2338e83121a4928a7b671 nmdc:dobj-11-z59x0m93 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d6c4de59f156a2b339fed8b37c1177c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j8039c34/nmdc:wfrbt-11-qyham857.1/nmdc_wfrbt-11-qyham857.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d6c4de59f156a2b339fed8b37c1177c nmdc:dobj-11-5jaxk224 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-j8039c34 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qyham857.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:89d6d135010e55068c1e62f51df114b7 nmdc:wfrbt-11-qyham857.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-j8039c34 +INFO:root:omics_processing_id: nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db88151fb4352c39b2d186af1d86593f nmdc:dobj-11-rzjktg78 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7569579396b6e7260592806978a23076 nmdc:dobj-11-g0qa3983 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:773ce209bd596562ccf16664d3f986cc nmdc:dobj-11-625hse22 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d4c0354357e501cc04b78d29f0d0f999 nmdc:dobj-11-gycn6q38 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-b6sr7v63 +INFO:root:New activity id created for nmdc:omprc-11-b6sr7v63 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-70t0zb87.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-70t0zb87.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:589c3d2de3303d20e9bccbcf31141b06 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-70t0zb87.1/nmdc_wfrqc-11-70t0zb87.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:589c3d2de3303d20e9bccbcf31141b06 nmdc:dobj-11-7nnqbn28 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-70t0zb87.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bdf626437ffd47a320ca17818919730d +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-70t0zb87.1/nmdc_wfrqc-11-70t0zb87.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bdf626437ffd47a320ca17818919730d nmdc:dobj-11-3832sf81 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-70t0zb87.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:eebd8ca2bff072bd226d823403e71f03 nmdc:wfrqc-11-70t0zb87.1 +INFO:root:New activity id created for nmdc:omprc-11-b6sr7v63 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cy7v5m41.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-cy7v5m41.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d713c3ea72fcc2b11e2a76c29d520d2f +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-cy7v5m41.1/nmdc_wfrqc-11-cy7v5m41.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d713c3ea72fcc2b11e2a76c29d520d2f nmdc:dobj-11-h42w9559 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cy7v5m41.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:228ca05ace2e4f026fc2bc600b1ec969 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-cy7v5m41.1/nmdc_wfrqc-11-cy7v5m41.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:228ca05ace2e4f026fc2bc600b1ec969 nmdc:dobj-11-1f3cv116 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cy7v5m41.1_filterStats.txt 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nmdc:514916ab12cd3259442fca1feec9a798 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-avn78359.1/nmdc_wfrqc-11-avn78359.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:514916ab12cd3259442fca1feec9a798 nmdc:dobj-11-f9b1d083 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-avn78359.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d2367fd701a924adc40a9f39eacf696c nmdc:wfrqc-11-avn78359.1 +INFO:root:New activity id created for nmdc:omprc-11-b6sr7v63 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-me6d5t51.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-me6d5t51.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3bf3cc39fcea83359d267fe071022f86 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-me6d5t51.1/nmdc_wfrqc-11-me6d5t51.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3bf3cc39fcea83359d267fe071022f86 nmdc:dobj-11-5crn3622 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-me6d5t51.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a42550f35311a4d92b96aaa519ac3c9e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrqc-11-me6d5t51.1/nmdc_wfrqc-11-me6d5t51.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a42550f35311a4d92b96aaa519ac3c9e nmdc:dobj-11-vp4x1w52 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-me6d5t51.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:1a10a8b4212d28a45ec0411141ea8588 nmdc:wfrqc-11-me6d5t51.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-b6sr7v63 +INFO:root:New activity id created for nmdc:omprc-11-b6sr7v63 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-gpdems20.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfmgas-11-gpdems20.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c9f05c82e532a178002405cd883144c3 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfmgas-11-gpdems20.1/nmdc_wfmgas-11-gpdems20.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c9f05c82e532a178002405cd883144c3 nmdc:dobj-11-r5mvvx96 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-b6sr7v63 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nmdc:6c1accc9f097b6fc9eb87220c8dcdecd nmdc:dobj-11-05p45d29 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gpdems20.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79ada2dc1d366bf0abaafd1efdaf3c75 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfmgas-11-gpdems20.1/nmdc_wfmgas-11-gpdems20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79ada2dc1d366bf0abaafd1efdaf3c75 nmdc:dobj-11-rx801z60 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-gpdems20.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7aee17f31766ef7075649727e58d9e43 +INFO:root:New file path computed for Assembly Coverage BAM: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfmgas-11-f7pd5w35.1/nmdc_wfmgas-11-f7pd5w35.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37343753bdc13fc34099c92dfaa36bd2 nmdc:dobj-11-2w50kw05 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-f7pd5w35.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50a9dbc703f5981f88e71409642020c0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfmgas-11-f7pd5w35.1/nmdc_wfmgas-11-f7pd5w35.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50a9dbc703f5981f88e71409642020c0 nmdc:dobj-11-m0gnz524 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-f7pd5w35.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1f03c0fc61d48637df5124693006e50 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfmgas-11-f7pd5w35.1/nmdc_wfmgas-11-f7pd5w35.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1f03c0fc61d48637df5124693006e50 nmdc:dobj-11-mbcdcc90 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-f7pd5w35.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:eebd8ca2bff072bd226d823403e71f03 nmdc:wfmgas-11-f7pd5w35.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-b6sr7v63 +INFO:root:New activity id created for nmdc:omprc-11-b6sr7v63 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vg15g202.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a67f2929268c5ceff913e52bf94c7f1b +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a67f2929268c5ceff913e52bf94c7f1b nmdc:dobj-11-3h8zmy97 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:892893400122d7b144f702341ec01143 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:892893400122d7b144f702341ec01143 nmdc:dobj-11-4c2v3c69 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de7516d955e4dccb0eac1a7e626e5a7e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de7516d955e4dccb0eac1a7e626e5a7e nmdc:dobj-11-zj68e166 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b27d19f34c7c3317c4edaedae7fb0638 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b27d19f34c7c3317c4edaedae7fb0638 nmdc:dobj-11-db5xnq61 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:04520ac6dd40f8bdb3c95d93579e1053 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:04520ac6dd40f8bdb3c95d93579e1053 nmdc:dobj-11-hjcv0903 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3f3588683e376146f87414524d46b214 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3f3588683e376146f87414524d46b214 nmdc:dobj-11-zhj45q44 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:853160e79cf9557666e84941086b2284 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:853160e79cf9557666e84941086b2284 nmdc:dobj-11-cvmjgp29 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0874acc644c264a6eda2692b17d66987 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0874acc644c264a6eda2692b17d66987 nmdc:dobj-11-5tpcgr12 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7ab1770a0ed0e784d98267d28326f9c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-vg15g202.1/nmdc_wfrbt-11-vg15g202.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7ab1770a0ed0e784d98267d28326f9c nmdc:dobj-11-8vr6z694 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vg15g202.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a5ad4717fd71d1cbd4c1958dc73dd1fc nmdc:wfrbt-11-vg15g202.1 +INFO:root:New activity id created for nmdc:omprc-11-b6sr7v63 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1tw5ev77.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3048b340bd286f81e5f73727282f9c4 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3048b340bd286f81e5f73727282f9c4 nmdc:dobj-11-fbsbrx77 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e29a57bb03fcdb0604e0d559752b869 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e29a57bb03fcdb0604e0d559752b869 nmdc:dobj-11-7x6gma56 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:19a6a2c0eb20aeee8b4dffdd07de7e58 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19a6a2c0eb20aeee8b4dffdd07de7e58 nmdc:dobj-11-ykn3r802 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ce08051bfda7ff0fcac5f7d360ac5b6 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ce08051bfda7ff0fcac5f7d360ac5b6 nmdc:dobj-11-9xr59416 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:01dc0f52651adb20ff27be6770d1e08f +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01dc0f52651adb20ff27be6770d1e08f nmdc:dobj-11-j7ktnc80 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fc5c7e4fe6d63c78ea89ca92149a7ea8 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc5c7e4fe6d63c78ea89ca92149a7ea8 nmdc:dobj-11-7taqy396 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:357bfd64db235f2aef9e1c9f7cf6a279 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:357bfd64db235f2aef9e1c9f7cf6a279 nmdc:dobj-11-1knvrp69 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94edfff7bdcedb55078eb8807f27781f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94edfff7bdcedb55078eb8807f27781f nmdc:dobj-11-nwd15a41 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:887be42e24cfc1ad45c1a500739fe439 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-b6sr7v63/nmdc:wfrbt-11-1tw5ev77.1/nmdc_wfrbt-11-1tw5ev77.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:887be42e24cfc1ad45c1a500739fe439 nmdc:dobj-11-mtq5fx13 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-b6sr7v63 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1tw5ev77.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:eebd8ca2bff072bd226d823403e71f03 nmdc:wfrbt-11-1tw5ev77.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-b6sr7v63 +INFO:root:omics_processing_id: nmdc:omprc-11-fsedet70 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1599297c0a3e797f3b8b97ba9ebe6893 nmdc:dobj-11-qyk5xw51 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-fsedet70 +INFO:root:New activity id created for nmdc:omprc-11-fsedet70 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-6r1f9t70.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fsedet70/nmdc:wfrqc-11-6r1f9t70.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3733ccfeb21e127f186f2c72f628fa7 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fsedet70/nmdc:wfrqc-11-6r1f9t70.1/nmdc_wfrqc-11-6r1f9t70.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b3733ccfeb21e127f186f2c72f628fa7 nmdc:dobj-11-n9b8hx66 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-fsedet70 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-6r1f9t70.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:84901405d63789b4d9c47f7c59cfe441 +INFO:root:New file path computed for QC Statistics: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fsedet70/nmdc:wfmgas-11-ft8r3b17.1/nmdc_wfmgas-11-ft8r3b17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1db64fb10a93548eaab510354b16759a nmdc:dobj-11-ffy6q880 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-fsedet70 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ft8r3b17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:676021bc154b6d11a15bc22a07518445 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-fsedet70/nmdc:wfmgas-11-ft8r3b17.1/nmdc_wfmgas-11-ft8r3b17.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:676021bc154b6d11a15bc22a07518445 nmdc:dobj-11-ndmasw70 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-fsedet70 +INFO:nmdc_automation.re_iding.base:new_filename: 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfbcc21dba03cab390a47e3b37314946 nmdc:dobj-11-s10y1j70 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0de3f5e445418aa678550e9751c5f12 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-aygvk977.1/nmdc_wfrbt-11-aygvk977.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0de3f5e445418aa678550e9751c5f12 nmdc:dobj-11-y8knc389 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d49fe2adb6a793ca816d31acae6d0584 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-aygvk977.1/nmdc_wfrbt-11-aygvk977.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d49fe2adb6a793ca816d31acae6d0584 nmdc:dobj-11-83maqw73 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a3273aa5ffa411774651cbe6fa34e56c +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-aygvk977.1/nmdc_wfrbt-11-aygvk977.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a3273aa5ffa411774651cbe6fa34e56c nmdc:dobj-11-c1syhc18 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9338ebb3c21a734cd55b09fafeb2bfd3 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-aygvk977.1/nmdc_wfrbt-11-aygvk977.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9338ebb3c21a734cd55b09fafeb2bfd3 nmdc:dobj-11-8jea9b98 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0075743f35a38ef33f5dc12faca571b9 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-aygvk977.1/nmdc_wfrbt-11-aygvk977.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0075743f35a38ef33f5dc12faca571b9 nmdc:dobj-11-r2h1j204 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:629ea929bb1a0766d6a348abcc3858e8 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-aygvk977.1/nmdc_wfrbt-11-aygvk977.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:629ea929bb1a0766d6a348abcc3858e8 nmdc:dobj-11-8n6z5992 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e361fee3cd946af28417ff1ee65b3215 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-aygvk977.1/nmdc_wfrbt-11-aygvk977.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e361fee3cd946af28417ff1ee65b3215 nmdc:dobj-11-5c3hnf12 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46a582d49db3ffaee42036e5bc188f3e +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-aygvk977.1/nmdc_wfrbt-11-aygvk977.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46a582d49db3ffaee42036e5bc188f3e nmdc:dobj-11-b0ykm569 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-aygvk977.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5c7dbe7883c4de3156d067584c0f07b8 nmdc:wfrbt-11-aygvk977.1 +INFO:root:New activity id created for nmdc:omprc-11-gg86mj11 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dez89q48.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:afff8c15ee07b1d35e40ba9058d31427 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afff8c15ee07b1d35e40ba9058d31427 nmdc:dobj-11-4wny6x79 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:259328571bc09098dab9bbf772fadfeb +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:259328571bc09098dab9bbf772fadfeb nmdc:dobj-11-t4m8db43 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b97aed60d834b2568fe9105f1d3b2c80 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b97aed60d834b2568fe9105f1d3b2c80 nmdc:dobj-11-8en4f104 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0e14720a481a9d102767022a77080cf +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0e14720a481a9d102767022a77080cf nmdc:dobj-11-9qbyqj97 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:890394a54e814762165fba7237976762 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:890394a54e814762165fba7237976762 nmdc:dobj-11-xf3pgz15 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f235810f93c0b5b2c5237b5c83c63345 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f235810f93c0b5b2c5237b5c83c63345 nmdc:dobj-11-x7rkv331 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a6a824b0260d240b3c1ae45b67b1ab7a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a6a824b0260d240b3c1ae45b67b1ab7a nmdc:dobj-11-hzgayw93 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60bd2eb983808eff315eb440fb971707 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60bd2eb983808eff315eb440fb971707 nmdc:dobj-11-z0ab0h58 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b802cedfc3cdf775e61f4611e0205e7 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gg86mj11/nmdc:wfrbt-11-dez89q48.1/nmdc_wfrbt-11-dez89q48.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b802cedfc3cdf775e61f4611e0205e7 nmdc:dobj-11-a7864y85 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gg86mj11 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dez89q48.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8f9c43526ea1d821cb77d060a9391a26 nmdc:wfrbt-11-dez89q48.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gg86mj11 +INFO:root:omics_processing_id: nmdc:omprc-11-q8rgev87 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c01a701579e935feb000dd58326161b nmdc:dobj-11-d7rjbf45 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a76db57a9c7c23a383abc0c038d55f8 nmdc:dobj-11-32eyb837 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8df75bcfcf3afcc9ebb15cfe70367478 nmdc:dobj-11-x9j2v009 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-q8rgev87 +INFO:root:New activity id created for nmdc:omprc-11-q8rgev87 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-49rgzf08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfrqc-11-49rgzf08.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f448af779b6ae17e0c47608afc5aeef4 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfrqc-11-49rgzf08.1/nmdc_wfrqc-11-49rgzf08.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f448af779b6ae17e0c47608afc5aeef4 nmdc:dobj-11-ky54qh42 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-q8rgev87 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-49rgzf08.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15fad4f99576b149b74d49e4826c1c89 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfrqc-11-49rgzf08.1/nmdc_wfrqc-11-49rgzf08.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15fad4f99576b149b74d49e4826c1c89 nmdc:dobj-11-a02mfe06 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-q8rgev87 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-49rgzf08.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ad819a915c7e51a8c43c117f09881589 nmdc:wfrqc-11-49rgzf08.1 +INFO:root:New activity id created for nmdc:omprc-11-q8rgev87 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hgshsa55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfrqc-11-hgshsa55.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f79c5c356aadf2e239a4f7acc540691f +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfrqc-11-hgshsa55.1/nmdc_wfrqc-11-hgshsa55.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f79c5c356aadf2e239a4f7acc540691f nmdc:dobj-11-2r4san59 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nmdc:MetagenomeAssembly: nmdc:wfmgas-11-pc09qa04.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfmgas-11-pc09qa04.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07a358e06573354610ee1d406ec2835f +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfmgas-11-pc09qa04.1/nmdc_wfmgas-11-pc09qa04.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07a358e06573354610ee1d406ec2835f nmdc:dobj-11-k3fha261 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-q8rgev87 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pc09qa04.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2c75206eb46ada6570f08b8e133ff64 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfmgas-11-pc09qa04.1/nmdc_wfmgas-11-pc09qa04.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2c75206eb46ada6570f08b8e133ff64 nmdc:dobj-11-abvsy308 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-q8rgev87 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pc09qa04.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eaca5c8e778f7f1bb2abf788b7cf481d +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfmgas-11-pc09qa04.1/nmdc_wfmgas-11-pc09qa04.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eaca5c8e778f7f1bb2abf788b7cf481d nmdc:dobj-11-pjea8a87 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-q8rgev87 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pc09qa04.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15291ac5f4202f205e15fa5f92a21985 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfmgas-11-pc09qa04.1/nmdc_wfmgas-11-pc09qa04.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15291ac5f4202f205e15fa5f92a21985 nmdc:dobj-11-sa1k9d21 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-q8rgev87 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pc09qa04.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fc14c3b92710d4545136ee0a5f1cd682 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q8rgev87/nmdc:wfmgas-11-pc09qa04.1/nmdc_wfmgas-11-pc09qa04.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc14c3b92710d4545136ee0a5f1cd682 nmdc:dobj-11-xw9k4672 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nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de4966f2188854d66c8a339cfb1f318a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x0n04t71/nmdc:wfrbt-11-5v63jy87.1/nmdc_wfrbt-11-5v63jy87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de4966f2188854d66c8a339cfb1f318a nmdc:dobj-11-7ws6aw37 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2dba303fa913ee1b0f7e431e045df605 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x0n04t71/nmdc:wfrbt-11-5v63jy87.1/nmdc_wfrbt-11-5v63jy87.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2dba303fa913ee1b0f7e431e045df605 nmdc:dobj-11-hk4qth09 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:87bbe405749b31bbebfbcbc5d3ae40e3 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x0n04t71/nmdc:wfrbt-11-5v63jy87.1/nmdc_wfrbt-11-5v63jy87.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:87bbe405749b31bbebfbcbc5d3ae40e3 nmdc:dobj-11-azjvcn27 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91b46085d5cc42c0f988298927b21037 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x0n04t71/nmdc:wfrbt-11-5v63jy87.1/nmdc_wfrbt-11-5v63jy87.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91b46085d5cc42c0f988298927b21037 nmdc:dobj-11-gftfe367 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:034fe2e0b93c2bddfbeab07338dc27f3 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x0n04t71/nmdc:wfrbt-11-5v63jy87.1/nmdc_wfrbt-11-5v63jy87.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:034fe2e0b93c2bddfbeab07338dc27f3 nmdc:dobj-11-rjbmxm54 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0a2e240a0b1cefb87a6dd62e9ae4eb6a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x0n04t71/nmdc:wfrbt-11-5v63jy87.1/nmdc_wfrbt-11-5v63jy87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a2e240a0b1cefb87a6dd62e9ae4eb6a nmdc:dobj-11-akxkk651 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:619ada62114158dfa0463038678061ce +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x0n04t71/nmdc:wfrbt-11-5v63jy87.1/nmdc_wfrbt-11-5v63jy87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:619ada62114158dfa0463038678061ce nmdc:dobj-11-2vq9yd78 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:636c760560ae210f0634a58911741683 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x0n04t71/nmdc:wfrbt-11-5v63jy87.1/nmdc_wfrbt-11-5v63jy87.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:636c760560ae210f0634a58911741683 nmdc:dobj-11-ne69wc91 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-x0n04t71 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5v63jy87.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:8a9b8d7e9352b76b70eae03ee4786df2 nmdc:wfrbt-11-5v63jy87.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-x0n04t71 +INFO:root:omics_processing_id: nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:57b6aeaf924e2e5f1c8ef379fbae3b59 nmdc:dobj-11-b520ff55 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4c6aa128600770fd27682f46fd81223 nmdc:dobj-11-5bwevc38 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:203ca4a223ce20f1cfa0f15d1a6c46ca nmdc:dobj-11-g3q3xx62 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75ca4c78d3a7b93f5d748e5bb772aebc nmdc:dobj-11-wz5c7175 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-q9secc05 +INFO:root:New activity id created for nmdc:omprc-11-q9secc05 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-x6d0ja78.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-x6d0ja78.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2660f5dd327dee0bf1dc2194d2f9d85e +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-x6d0ja78.1/nmdc_wfrqc-11-x6d0ja78.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2660f5dd327dee0bf1dc2194d2f9d85e nmdc:dobj-11-tqwh4d18 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x6d0ja78.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c37d1611e40b9b6b34fd69e698b7357 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-x6d0ja78.1/nmdc_wfrqc-11-x6d0ja78.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c37d1611e40b9b6b34fd69e698b7357 nmdc:dobj-11-3wn4yg80 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-x6d0ja78.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:079fd8a9106e3406748f8ab4fc88990a nmdc:wfrqc-11-x6d0ja78.1 +INFO:root:New activity id created for nmdc:omprc-11-q9secc05 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rjz7k186.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-rjz7k186.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:313aed366c000ab511b2babecad744e4 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-rjz7k186.1/nmdc_wfrqc-11-rjz7k186.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:313aed366c000ab511b2babecad744e4 nmdc:dobj-11-g5cm3328 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rjz7k186.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcaf188bfda91e8b9b6941ce632e06e5 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-rjz7k186.1/nmdc_wfrqc-11-rjz7k186.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcaf188bfda91e8b9b6941ce632e06e5 nmdc:dobj-11-vyed5606 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rjz7k186.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:ea49167c60f6c4f13ada23982e63605e nmdc:wfrqc-11-rjz7k186.1 +INFO:root:New activity id created for nmdc:omprc-11-q9secc05 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-51pc3p67.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-51pc3p67.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b10d5c93e9b7dec3daf1be557c283f1d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-51pc3p67.1/nmdc_wfrqc-11-51pc3p67.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b10d5c93e9b7dec3daf1be557c283f1d nmdc:dobj-11-v5mf3666 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-51pc3p67.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cfa0f5840310c7f741bbb596c1d6465b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-51pc3p67.1/nmdc_wfrqc-11-51pc3p67.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cfa0f5840310c7f741bbb596c1d6465b nmdc:dobj-11-497d1270 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-51pc3p67.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:63dfb5ec2084abaccb3f6fe34579f367 nmdc:wfrqc-11-51pc3p67.1 +INFO:root:New activity id created for nmdc:omprc-11-q9secc05 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-g440jt84.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-g440jt84.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80314daf96dc53948ccf0eff3faa4817 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-g440jt84.1/nmdc_wfrqc-11-g440jt84.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80314daf96dc53948ccf0eff3faa4817 nmdc:dobj-11-241mgk12 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g440jt84.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b20547340767b79583a9d3905b7d6e48 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrqc-11-g440jt84.1/nmdc_wfrqc-11-g440jt84.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b20547340767b79583a9d3905b7d6e48 nmdc:dobj-11-0czdqh04 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g440jt84.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fddd00cb2105984228f195c5ff6017c2 nmdc:wfrqc-11-g440jt84.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-q9secc05 +INFO:root:New activity id created for nmdc:omprc-11-q9secc05 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-hgtpdv12.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfmgas-11-hgtpdv12.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ccb94f03360654d71ac3fddd90f9e0d3 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfmgas-11-hgtpdv12.1/nmdc_wfmgas-11-hgtpdv12.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ccb94f03360654d71ac3fddd90f9e0d3 nmdc:dobj-11-yjfnpg52 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hgtpdv12.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e69dcbe54eba96643737f5d2c29220ee +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfmgas-11-hgtpdv12.1/nmdc_wfmgas-11-hgtpdv12.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e69dcbe54eba96643737f5d2c29220ee nmdc:dobj-11-x4tbt236 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-hgtpdv12.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ca708e3a61a6464599f467d285e41ff4 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfmgas-11-hgtpdv12.1/nmdc_wfmgas-11-hgtpdv12.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca708e3a61a6464599f467d285e41ff4 nmdc:dobj-11-94tprv94 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nmdc_wfrbt-11-1w5z5q22.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac761a484cb4bae703e3e6cd8adcaf50 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-1w5z5q22.1/nmdc_wfrbt-11-1w5z5q22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac761a484cb4bae703e3e6cd8adcaf50 nmdc:dobj-11-9qcfn111 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1w5z5q22.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:079fd8a9106e3406748f8ab4fc88990a nmdc:wfrbt-11-1w5z5q22.1 +INFO:root:New activity id created for nmdc:omprc-11-q9secc05 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-amyvhr93.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:da846717e891c0204039a22763005225 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:da846717e891c0204039a22763005225 nmdc:dobj-11-e2m8q050 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae2094baa8e3e2d145c3d9408679b753 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae2094baa8e3e2d145c3d9408679b753 nmdc:dobj-11-h362jw80 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:754f4393a2b99b55333df9019efcbe79 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:754f4393a2b99b55333df9019efcbe79 nmdc:dobj-11-ct9ws236 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ad55cd176926b3f02f496bb41b2a3ed +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ad55cd176926b3f02f496bb41b2a3ed nmdc:dobj-11-4amf6150 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1cd4392405ac9d2c8310654dd0901bb7 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1cd4392405ac9d2c8310654dd0901bb7 nmdc:dobj-11-qcm1dd39 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0c61da503e334fab4b84bc199585d816 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c61da503e334fab4b84bc199585d816 nmdc:dobj-11-p909vt14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5054fac65b4b00f842182695342df39a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5054fac65b4b00f842182695342df39a nmdc:dobj-11-6vfxmw61 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:097d04d108f350b2d3eda093abceef0f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:097d04d108f350b2d3eda093abceef0f nmdc:dobj-11-r1ybvp23 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:750e0a02f9fc35e2440bb0eda7c4258c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-amyvhr93.1/nmdc_wfrbt-11-amyvhr93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:750e0a02f9fc35e2440bb0eda7c4258c nmdc:dobj-11-x15d6170 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-amyvhr93.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:ea49167c60f6c4f13ada23982e63605e nmdc:wfrbt-11-amyvhr93.1 +INFO:root:New activity id created for nmdc:omprc-11-q9secc05 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-ppytzx96.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5233547519223c3d345033e2b0f7090 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5233547519223c3d345033e2b0f7090 nmdc:dobj-11-wwvdwq43 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a56cef4a1a65c617041fc853c869f62 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a56cef4a1a65c617041fc853c869f62 nmdc:dobj-11-gyz5xh11 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f4a88eaee66ee872cbc1f1592969a70 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f4a88eaee66ee872cbc1f1592969a70 nmdc:dobj-11-89grtp24 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:696d3ce7854c133a158670cd690e4e34 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:696d3ce7854c133a158670cd690e4e34 nmdc:dobj-11-p29y3y98 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9af18755ee716f2a1fb4e07e25bcd8c9 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9af18755ee716f2a1fb4e07e25bcd8c9 nmdc:dobj-11-gpkvfm91 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a820048508d359ef80a0e233a06ba3d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a820048508d359ef80a0e233a06ba3d nmdc:dobj-11-eb8np819 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74ad9e6d99407616806588819ad6f757 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74ad9e6d99407616806588819ad6f757 nmdc:dobj-11-vxgpsm10 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:836236a3e11d5fa280d41901dc47b39c +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:836236a3e11d5fa280d41901dc47b39c nmdc:dobj-11-ezmfbv47 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5969d1e114476d62f94bd2c60ab4e2c5 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-ppytzx96.1/nmdc_wfrbt-11-ppytzx96.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5969d1e114476d62f94bd2c60ab4e2c5 nmdc:dobj-11-cb0fk665 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ppytzx96.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fddd00cb2105984228f195c5ff6017c2 nmdc:wfrbt-11-ppytzx96.1 +INFO:root:New activity id created for nmdc:omprc-11-q9secc05 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-012ws042.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98a4e2f835025ec22922b1963fa075ef +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98a4e2f835025ec22922b1963fa075ef nmdc:dobj-11-s0s2w817 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40393eaaa8bf199fadbd356924d25e2a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40393eaaa8bf199fadbd356924d25e2a nmdc:dobj-11-t3nqxg14 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6adb38086f4fede8f90e75598bbba7bc +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6adb38086f4fede8f90e75598bbba7bc nmdc:dobj-11-t64vke39 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8cd97fe44bff22ab98e0519b9bc00a7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8cd97fe44bff22ab98e0519b9bc00a7 nmdc:dobj-11-x54dc244 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bc83fa46690db232060c33d203be373b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bc83fa46690db232060c33d203be373b nmdc:dobj-11-bzyfpg31 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4302c5a86faa1779cdb38c24614f7c06 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4302c5a86faa1779cdb38c24614f7c06 nmdc:dobj-11-rpw9qj63 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ecf333958bf25dbd2010fbc30448817f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ecf333958bf25dbd2010fbc30448817f nmdc:dobj-11-y7msnz20 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e9b855face397d461db4044af144d085 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e9b855face397d461db4044af144d085 nmdc:dobj-11-4nd6gc36 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79d0cd02c455d346bbb8a8a0397d3046 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q9secc05/nmdc:wfrbt-11-012ws042.1/nmdc_wfrbt-11-012ws042.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:79d0cd02c455d346bbb8a8a0397d3046 nmdc:dobj-11-rkcajv29 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-q9secc05 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-012ws042.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:63dfb5ec2084abaccb3f6fe34579f367 nmdc:wfrbt-11-012ws042.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-q9secc05 +INFO:root:omics_processing_id: nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4163b5fff34872b692edd3a93be2f50a nmdc:dobj-11-j08vc835 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f130c78ed8d4c5a8e49c9aa644fcb4c nmdc:dobj-11-kdqsfq26 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:93d5c4bed3b2bba7793910a403d5fea9 nmdc:dobj-11-pm8q2b37 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-491n9d74 +INFO:root:New activity id created for nmdc:omprc-11-491n9d74 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-r4b80y57.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-r4b80y57.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbbf1a61af1860556ebce966a90d3b9c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-r4b80y57.1/nmdc_wfrqc-11-r4b80y57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbbf1a61af1860556ebce966a90d3b9c nmdc:dobj-11-4r7h7910 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-r4b80y57.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a0d249b91b707662310a5369b3a372e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-r4b80y57.1/nmdc_wfrqc-11-r4b80y57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a0d249b91b707662310a5369b3a372e nmdc:dobj-11-gfqnja80 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-r4b80y57.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0fe970cf46d72718ed82777ddf0556d7 nmdc:wfrqc-11-r4b80y57.1 +INFO:root:New activity id created for nmdc:omprc-11-491n9d74 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xr8yqp25.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-xr8yqp25.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:31b2f117898e907ec940633c40a8aca1 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-xr8yqp25.1/nmdc_wfrqc-11-xr8yqp25.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:31b2f117898e907ec940633c40a8aca1 nmdc:dobj-11-mpzevq59 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xr8yqp25.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:459440d81c35f02f6acd742231c52668 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-xr8yqp25.1/nmdc_wfrqc-11-xr8yqp25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:459440d81c35f02f6acd742231c52668 nmdc:dobj-11-qrpw8150 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xr8yqp25.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2be77327a71d9ba04cba30015fd93fd0 nmdc:wfrqc-11-xr8yqp25.1 +INFO:root:New activity id created for nmdc:omprc-11-491n9d74 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xmqncc56.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-xmqncc56.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a9b36b00f956b8a5f524d4889368fa5 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-xmqncc56.1/nmdc_wfrqc-11-xmqncc56.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a9b36b00f956b8a5f524d4889368fa5 nmdc:dobj-11-d4gn5j39 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xmqncc56.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2214156f82711fe4d93b5d2ceb701698 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfrqc-11-xmqncc56.1/nmdc_wfrqc-11-xmqncc56.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2214156f82711fe4d93b5d2ceb701698 nmdc:dobj-11-vhqmyz27 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xmqncc56.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4bc7f8e0057b5c575b9f49fe4b235b61 nmdc:wfrqc-11-xmqncc56.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-491n9d74 +INFO:root:New activity id created for nmdc:omprc-11-491n9d74 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-87sxv482.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-87sxv482.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:adefa154673888182fdf954e99ef906b +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-87sxv482.1/nmdc_wfmgas-11-87sxv482.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:adefa154673888182fdf954e99ef906b nmdc:dobj-11-hbtfnv80 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-87sxv482.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec4c53c31a0ea73aa3c11ce4ea8c92cd +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-87sxv482.1/nmdc_wfmgas-11-87sxv482.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec4c53c31a0ea73aa3c11ce4ea8c92cd nmdc:dobj-11-851jv519 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-87sxv482.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd23cd3db6039a1610187ead456c4a8d +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-87sxv482.1/nmdc_wfmgas-11-87sxv482.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd23cd3db6039a1610187ead456c4a8d nmdc:dobj-11-v0vrk274 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-87sxv482.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:af42a42babe0fb22d7c31899871738f0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-87sxv482.1/nmdc_wfmgas-11-87sxv482.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:af42a42babe0fb22d7c31899871738f0 nmdc:dobj-11-h9xhdr52 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-87sxv482.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:75b5f2cfb3644adf458651991d71099c +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-87sxv482.1/nmdc_wfmgas-11-87sxv482.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:75b5f2cfb3644adf458651991d71099c nmdc:dobj-11-y5kzp870 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-87sxv482.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:4bc7f8e0057b5c575b9f49fe4b235b61 nmdc:wfmgas-11-87sxv482.1 +INFO:root:New activity id created for nmdc:omprc-11-491n9d74 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-mtjdjv08.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-mtjdjv08.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:204a5d1974843752df8a77b90fd11571 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-mtjdjv08.1/nmdc_wfmgas-11-mtjdjv08.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:204a5d1974843752df8a77b90fd11571 nmdc:dobj-11-ak738y14 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mtjdjv08.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b814105506fc0d74fb1b1543c8f3e6f6 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-mtjdjv08.1/nmdc_wfmgas-11-mtjdjv08.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b814105506fc0d74fb1b1543c8f3e6f6 nmdc:dobj-11-q1dtft40 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mtjdjv08.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0515568d021d2cdce0caad76fad5426d +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-mtjdjv08.1/nmdc_wfmgas-11-mtjdjv08.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0515568d021d2cdce0caad76fad5426d nmdc:dobj-11-bp1hsy10 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mtjdjv08.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8b0cd10beca4ca0caf49203426d06bd2 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-mtjdjv08.1/nmdc_wfmgas-11-mtjdjv08.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8b0cd10beca4ca0caf49203426d06bd2 nmdc:dobj-11-fjk1e548 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mtjdjv08.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:676384feceb3c26b909d6fd56e622ae8 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-mtjdjv08.1/nmdc_wfmgas-11-mtjdjv08.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:676384feceb3c26b909d6fd56e622ae8 nmdc:dobj-11-5z92xp83 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-6n4hxm97.1/nmdc_wfmgas-11-6n4hxm97.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd00bea279c2a51a550e26ee7fbf0119 nmdc:dobj-11-fpen4060 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6n4hxm97.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3860ac2853a52c90bff74111f1f9d1f6 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-491n9d74/nmdc:wfmgas-11-6n4hxm97.1/nmdc_wfmgas-11-6n4hxm97.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3860ac2853a52c90bff74111f1f9d1f6 nmdc:dobj-11-gj20rs24 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-491n9d74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-6n4hxm97.1_assembly.agp 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:69805d23cd10afb072304a923fdce6f4 nmdc:dobj-11-k1264p44 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18e2adf05a6c48085a1eb6b1130752e9 nmdc:dobj-11-mdzag830 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:55e5a00518787320e5d694c03e084ef2 nmdc:dobj-11-wf7edc23 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-4rfzth12 +INFO:root:New activity id created for nmdc:omprc-11-4rfzth12 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-brh95361.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrqc-11-brh95361.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:836a8cc29a2facf089faff0672a1a93c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrqc-11-brh95361.1/nmdc_wfrqc-11-brh95361.1_filtered.fastq.gz 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activity id created for nmdc:omprc-11-4rfzth12 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-9rpz6n97.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrqc-11-9rpz6n97.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d403edcada2f13fec939fa43c9c0a4a5 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrqc-11-9rpz6n97.1/nmdc_wfrqc-11-9rpz6n97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d403edcada2f13fec939fa43c9c0a4a5 nmdc:dobj-11-n9c4ww06 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9rpz6n97.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ff4e893e03a4c8547d6832493db739b0 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrqc-11-9rpz6n97.1/nmdc_wfrqc-11-9rpz6n97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff4e893e03a4c8547d6832493db739b0 nmdc:dobj-11-2vnfhm31 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-9rpz6n97.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:af462bea86d678e079f34be072b35cf9 nmdc:wfrqc-11-9rpz6n97.1 +INFO:root:New activity id created for nmdc:omprc-11-4rfzth12 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-65g9gy55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrqc-11-65g9gy55.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:35a7abc9d80c56bf7b334b63ee09b783 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrqc-11-65g9gy55.1/nmdc_wfrqc-11-65g9gy55.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:35a7abc9d80c56bf7b334b63ee09b783 nmdc:dobj-11-wctte166 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-65g9gy55.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:962b7d5229542806a26b103b02e8f86c +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrqc-11-65g9gy55.1/nmdc_wfrqc-11-65g9gy55.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:962b7d5229542806a26b103b02e8f86c nmdc:dobj-11-smn0rz80 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-65g9gy55.1_filterStats.txt 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nmdc_wfmgas-11-1n48zg84.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07d325817b48afc734273da5560818cc +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfmgas-11-1n48zg84.1/nmdc_wfmgas-11-1n48zg84.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07d325817b48afc734273da5560818cc nmdc:dobj-11-hkny6s40 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-1n48zg84.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb114a1ff3e03d6cae84f6029f5563a8 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfmgas-11-1n48zg84.1/nmdc_wfmgas-11-1n48zg84.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb114a1ff3e03d6cae84f6029f5563a8 nmdc:dobj-11-8r6fte17 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-t239yp50.1/nmdc_wfrbt-11-t239yp50.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b53a1a0705df980505afb092ad6990f2 nmdc:dobj-11-1za7c128 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t239yp50.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ec32f29fce5fe393b150cbd598e4d6a3 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-t239yp50.1/nmdc_wfrbt-11-t239yp50.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ec32f29fce5fe393b150cbd598e4d6a3 nmdc:dobj-11-tzdkn057 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-t239yp50.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:af462bea86d678e079f34be072b35cf9 nmdc:wfrbt-11-t239yp50.1 +INFO:root:New activity id created for nmdc:omprc-11-4rfzth12 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-180hp429.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a4703a709853810c4107d8309002c005 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4703a709853810c4107d8309002c005 nmdc:dobj-11-p5vk3269 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a7833ff3c63ac737976e7219efb6cadb +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7833ff3c63ac737976e7219efb6cadb nmdc:dobj-11-ctnxb417 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:12448300da7af60ca0444c1759c35fa2 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:12448300da7af60ca0444c1759c35fa2 nmdc:dobj-11-kc8qy418 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:930b7ea101497cc0afe305b8a27e2c65 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:930b7ea101497cc0afe305b8a27e2c65 nmdc:dobj-11-e4ff5338 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd5f17b8eaa54b5d89fff733a4c3f7de +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd5f17b8eaa54b5d89fff733a4c3f7de nmdc:dobj-11-9yb11c09 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bef56c02b339b8d4338b30d305281d39 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bef56c02b339b8d4338b30d305281d39 nmdc:dobj-11-ssydxa87 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:76103b2dea469becb18aff928edcba21 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:76103b2dea469becb18aff928edcba21 nmdc:dobj-11-hm3wyb22 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a0c7f5b5187dcfb05af51a9f99a71c6 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1a0c7f5b5187dcfb05af51a9f99a71c6 nmdc:dobj-11-wsrfce10 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4327c7c8dc43b652f3c4bced77acd79f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4rfzth12/nmdc:wfrbt-11-180hp429.1/nmdc_wfrbt-11-180hp429.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4327c7c8dc43b652f3c4bced77acd79f nmdc:dobj-11-gt64fw12 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-4rfzth12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-180hp429.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a5b0af9c16c1cbfac5aa85bc25956d35 nmdc:wfrbt-11-180hp429.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-4rfzth12 +INFO:root:omics_processing_id: nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6fa7a076755a394730e0f5074738a483 nmdc:dobj-11-0g5gf607 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b4d4845cee6093fbaf20d1b90f68ec25 nmdc:dobj-11-d2a92h46 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b3568d639719c3577625356dbc7adb1 nmdc:dobj-11-ajhdfz23 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gkk9ex26 +INFO:root:New activity id created for nmdc:omprc-11-gkk9ex26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-vhzsap44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-vhzsap44.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18a83573d9042b94542cf3dfb33464f3 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-vhzsap44.1/nmdc_wfrqc-11-vhzsap44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18a83573d9042b94542cf3dfb33464f3 nmdc:dobj-11-ac22p815 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vhzsap44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b1a1a06e3a9f6544201af8e198262c4 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-vhzsap44.1/nmdc_wfrqc-11-vhzsap44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b1a1a06e3a9f6544201af8e198262c4 nmdc:dobj-11-y7era522 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-vhzsap44.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:69a6dcfb9ab59097e7dbd9efdd54bd8c nmdc:wfrqc-11-vhzsap44.1 +INFO:root:New activity id created for nmdc:omprc-11-gkk9ex26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0ksd6z77.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-0ksd6z77.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:830f3c2d2ae846a7cb60a2f500f7a691 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-0ksd6z77.1/nmdc_wfrqc-11-0ksd6z77.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:830f3c2d2ae846a7cb60a2f500f7a691 nmdc:dobj-11-ddjnkh02 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0ksd6z77.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7143d83fc5034927cc6c4c802340761e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-0ksd6z77.1/nmdc_wfrqc-11-0ksd6z77.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7143d83fc5034927cc6c4c802340761e nmdc:dobj-11-zd0xvh81 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0ksd6z77.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5 nmdc:wfrqc-11-0ksd6z77.1 +INFO:root:New activity id created for nmdc:omprc-11-gkk9ex26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rkt7ac47.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-rkt7ac47.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6dca41515f0563d0892fc30fb5ef09b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-rkt7ac47.1/nmdc_wfrqc-11-rkt7ac47.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6dca41515f0563d0892fc30fb5ef09b nmdc:dobj-11-d50wyb09 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rkt7ac47.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ec78d24631dacb04f11d4ab5655bedf +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrqc-11-rkt7ac47.1/nmdc_wfrqc-11-rkt7ac47.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ec78d24631dacb04f11d4ab5655bedf nmdc:dobj-11-0wyssp33 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rkt7ac47.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:5e6cbe6e72f7fc084e08928994e51f80 nmdc:wfrqc-11-rkt7ac47.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gkk9ex26 +INFO:root:New activity id created for nmdc:omprc-11-gkk9ex26 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-5e9aq220.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfmgas-11-5e9aq220.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:149f2b5451358d62d7238b66c7270cc4 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfmgas-11-5e9aq220.1/nmdc_wfmgas-11-5e9aq220.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:149f2b5451358d62d7238b66c7270cc4 nmdc:dobj-11-cgdqdb39 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gkk9ex26 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nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d9178f8777e4b836454e001864531e4a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-e6wcn148.1/nmdc_wfrbt-11-e6wcn148.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d9178f8777e4b836454e001864531e4a nmdc:dobj-11-av5cvr87 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:704ea7f9c2f4803cf732fa87398054d9 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-e6wcn148.1/nmdc_wfrbt-11-e6wcn148.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:704ea7f9c2f4803cf732fa87398054d9 nmdc:dobj-11-dmhk2568 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fc99d050911c796d69c1475d44d53c42 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-e6wcn148.1/nmdc_wfrbt-11-e6wcn148.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc99d050911c796d69c1475d44d53c42 nmdc:dobj-11-pnz8g246 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d49613542a551d8159d6aabfda0f7505 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-e6wcn148.1/nmdc_wfrbt-11-e6wcn148.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d49613542a551d8159d6aabfda0f7505 nmdc:dobj-11-2efdsd03 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:192556d84646d8742bf15d2ea874d133 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-e6wcn148.1/nmdc_wfrbt-11-e6wcn148.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:192556d84646d8742bf15d2ea874d133 nmdc:dobj-11-nc21jy76 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:109e15c9b7add1c4700ef4d0aa5bfeb1 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-e6wcn148.1/nmdc_wfrbt-11-e6wcn148.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:109e15c9b7add1c4700ef4d0aa5bfeb1 nmdc:dobj-11-d5n8wd10 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3dfc6845aa126533f2079dc8c1597f12 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-e6wcn148.1/nmdc_wfrbt-11-e6wcn148.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3dfc6845aa126533f2079dc8c1597f12 nmdc:dobj-11-hrcvz923 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9001f80ce3265252556e2777f2d45a0b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-e6wcn148.1/nmdc_wfrbt-11-e6wcn148.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9001f80ce3265252556e2777f2d45a0b nmdc:dobj-11-8h1mdc26 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-e6wcn148.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fc3e4d0db3c1f0dc9a7e4a514e3387c5 nmdc:wfrbt-11-e6wcn148.1 +INFO:root:New activity id created for nmdc:omprc-11-gkk9ex26 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8jvwsk10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bed80531bf0df17b61a45179662eba6f +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bed80531bf0df17b61a45179662eba6f nmdc:dobj-11-q02erd98 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fb41563d65c56c2843752953a657ad31 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fb41563d65c56c2843752953a657ad31 nmdc:dobj-11-41jf2j49 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7b617542e9c966928a77072d53e5f9e5 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7b617542e9c966928a77072d53e5f9e5 nmdc:dobj-11-ncxctp75 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6ea8a8ed90966f6875d68365acc9fd4f +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ea8a8ed90966f6875d68365acc9fd4f nmdc:dobj-11-dyg0pp68 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91f6c53c986f8b58b659ee577e3a57e3 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91f6c53c986f8b58b659ee577e3a57e3 nmdc:dobj-11-7a3dgv85 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aff88d2245daa081b6b40b35b3a7a2d8 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aff88d2245daa081b6b40b35b3a7a2d8 nmdc:dobj-11-mc6pfj21 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4898369a38d864ee3b9a3314d5d996c9 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4898369a38d864ee3b9a3314d5d996c9 nmdc:dobj-11-mbr2b906 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e459bca71b3b2b21f6e76f91afa01645 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e459bca71b3b2b21f6e76f91afa01645 nmdc:dobj-11-22yhvx44 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10eac9e524b8581242cf44149e211581 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gkk9ex26/nmdc:wfrbt-11-8jvwsk10.1/nmdc_wfrbt-11-8jvwsk10.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10eac9e524b8581242cf44149e211581 nmdc:dobj-11-0hapkv04 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gkk9ex26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8jvwsk10.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5e6cbe6e72f7fc084e08928994e51f80 nmdc:wfrbt-11-8jvwsk10.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gkk9ex26 +INFO:root:omics_processing_id: nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aab32bc3c31de86e2a469cec09c8dbd4 nmdc:dobj-11-gvke4h68 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ab611c823ae881204ff7a3d392e1c8c1 nmdc:dobj-11-sz03rs26 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:159cdfe48288f97db31d9faafe0dd9c1 nmdc:dobj-11-ernx1t86 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e56253d3b762168c68c7f9a6f541a67d nmdc:dobj-11-vfnzme57 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8r9aq834 +INFO:root:New activity id created for nmdc:omprc-11-8r9aq834 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-z89gca53.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrqc-11-z89gca53.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:72eabf7d3eb1eced050247a800d6f01c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrqc-11-z89gca53.1/nmdc_wfrqc-11-z89gca53.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:72eabf7d3eb1eced050247a800d6f01c nmdc:dobj-11-2g01wr04 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z89gca53.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:33a92661e655803763bc83ade763e631 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrqc-11-z89gca53.1/nmdc_wfrqc-11-z89gca53.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33a92661e655803763bc83ade763e631 nmdc:dobj-11-3qexxw70 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z89gca53.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e4ae0b239de3c71d5f5b541a2e2add9c nmdc:wfrqc-11-z89gca53.1 +INFO:root:New activity id created for nmdc:omprc-11-8r9aq834 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-smacp834.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrqc-11-smacp834.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0eedc9538c9dc29f52f2f3d096c95361 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrqc-11-smacp834.1/nmdc_wfrqc-11-smacp834.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0eedc9538c9dc29f52f2f3d096c95361 nmdc:dobj-11-ey3f2a62 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8r9aq834 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-ydyajf17.1/nmdc_wfrbt-11-ydyajf17.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6238f9358f45b837bd661a09ac2f6d43 nmdc:dobj-11-13yt4a51 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ydyajf17.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bcc9d82ba42996a434182c100288c92f +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-ydyajf17.1/nmdc_wfrbt-11-ydyajf17.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bcc9d82ba42996a434182c100288c92f nmdc:dobj-11-ftpjw057 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ydyajf17.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a4040aaa947c5d14f76962847bef4ae +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-ydyajf17.1/nmdc_wfrbt-11-ydyajf17.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a4040aaa947c5d14f76962847bef4ae nmdc:dobj-11-grb6tq20 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ydyajf17.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:090f4c36028159211f76e1c0c37215df +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-ydyajf17.1/nmdc_wfrbt-11-ydyajf17.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:090f4c36028159211f76e1c0c37215df nmdc:dobj-11-chfz1503 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ydyajf17.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47282de9de2d20de2ae28f6a6c9a712f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-ydyajf17.1/nmdc_wfrbt-11-ydyajf17.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47282de9de2d20de2ae28f6a6c9a712f nmdc:dobj-11-1rbsv996 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ydyajf17.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4639e45fc3c714086ed06411325429e +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-ydyajf17.1/nmdc_wfrbt-11-ydyajf17.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4639e45fc3c714086ed06411325429e nmdc:dobj-11-zmytc933 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ydyajf17.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:edac51feea05a7654b9500fc00451326 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-ydyajf17.1/nmdc_wfrbt-11-ydyajf17.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:edac51feea05a7654b9500fc00451326 nmdc:dobj-11-rvvwz492 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ydyajf17.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e4ae0b239de3c71d5f5b541a2e2add9c nmdc:wfrbt-11-ydyajf17.1 +INFO:root:New activity id created for nmdc:omprc-11-8r9aq834 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-1yb0fw89.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-1yb0fw89.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0010d322942f8e0ed830b6d0600a0b90 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-1yb0fw89.1/nmdc_wfrbt-11-1yb0fw89.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0010d322942f8e0ed830b6d0600a0b90 nmdc:dobj-11-7p5t6g28 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1yb0fw89.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b7bfc4f8ce4aa2a748c3233ee123ce6 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-1yb0fw89.1/nmdc_wfrbt-11-1yb0fw89.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b7bfc4f8ce4aa2a748c3233ee123ce6 nmdc:dobj-11-yjew4543 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1yb0fw89.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa4b0c38e1ca714c2f2c3b3d56eb833e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-1yb0fw89.1/nmdc_wfrbt-11-1yb0fw89.1_gottcha2_krona.html 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HTML report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1yb0fw89.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e35e2140197b2018d95b290fa093b50 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8r9aq834/nmdc:wfrbt-11-1yb0fw89.1/nmdc_wfrbt-11-1yb0fw89.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e35e2140197b2018d95b290fa093b50 nmdc:dobj-11-gg2vgx31 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8r9aq834 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-1yb0fw89.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd20f7addef5eb78df7d6af462860525 +INFO:root:New file path computed for Kraken2 Classification Report: 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nmdc_wfrbt-11-1yb0fw89.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:86d73e42a0821f84b71576c86db5b3ef nmdc:wfrbt-11-1yb0fw89.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8r9aq834 +INFO:root:omics_processing_id: nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99d20bb2d5170eada8bc09733bffe2f7 nmdc:dobj-11-1hwg3r07 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77dc15ac74bc8682b189c1fff8f55a18 nmdc:dobj-11-39y5h005 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:51e2b134238ed340ff2a5198de6283c4 nmdc:dobj-11-z2617s51 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ff6e9db319d9530b3ec17a8cfa9519e5 nmdc:dobj-11-3k1q1c44 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-xf3qmp78 +INFO:root:New activity id created for nmdc:omprc-11-xf3qmp78 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4ve2b661.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-4ve2b661.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a404248a3acd1b68f2d409da5a834650 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-4ve2b661.1/nmdc_wfrqc-11-4ve2b661.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a404248a3acd1b68f2d409da5a834650 nmdc:dobj-11-zvmvgw25 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4ve2b661.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ece3bd67980774fb394a1b297c436cb0 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-4ve2b661.1/nmdc_wfrqc-11-4ve2b661.1_filterStats.txt 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nmdc:1ba2d52f1704a3969bd871493a51ad6a nmdc:dobj-11-qg5ngd91 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-t20xf676.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dbdc018d735a210a6fff23bafae77367 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-t20xf676.1/nmdc_wfrqc-11-t20xf676.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dbdc018d735a210a6fff23bafae77367 nmdc:dobj-11-18t6fs41 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-t20xf676.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2ef76f18e76a9ac379c1a21d6669aac3 nmdc:wfrqc-11-t20xf676.1 +INFO:root:New activity id created for nmdc:omprc-11-xf3qmp78 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-awwwn725.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-awwwn725.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ae3a027031793d93c04756fdacf3907d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-awwwn725.1/nmdc_wfrqc-11-awwwn725.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ae3a027031793d93c04756fdacf3907d nmdc:dobj-11-hb41r856 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-awwwn725.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b6f07242a2ea2c26b1989cb4d1130cf +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-awwwn725.1/nmdc_wfrqc-11-awwwn725.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b6f07242a2ea2c26b1989cb4d1130cf nmdc:dobj-11-gdphrg19 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-awwwn725.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e794e090c460de0d3255da21d1d5628e nmdc:wfrqc-11-awwwn725.1 +INFO:root:New activity id created for nmdc:omprc-11-xf3qmp78 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-2n7mtm37.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-2n7mtm37.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac40ab6cfd4420c7af0fbe8056c00f50 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-2n7mtm37.1/nmdc_wfrqc-11-2n7mtm37.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac40ab6cfd4420c7af0fbe8056c00f50 nmdc:dobj-11-914bbp65 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2n7mtm37.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:01f1ab942b6f98b2a2ec6556860523db +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrqc-11-2n7mtm37.1/nmdc_wfrqc-11-2n7mtm37.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:01f1ab942b6f98b2a2ec6556860523db nmdc:dobj-11-pfa3kt52 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-2n7mtm37.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a1d0f5db097bc014964d4e51b4ce60dc nmdc:wfrqc-11-2n7mtm37.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-xf3qmp78 +INFO:root:New activity id created for nmdc:omprc-11-xf3qmp78 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-dy6vbn93.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfmgas-11-dy6vbn93.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:41b036b64b8b84717e83d6c6bf92ffb5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfmgas-11-dy6vbn93.1/nmdc_wfmgas-11-dy6vbn93.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:41b036b64b8b84717e83d6c6bf92ffb5 nmdc:dobj-11-df8p4x86 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dy6vbn93.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1dac6277001801cf8dc16abbe75f3737 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfmgas-11-dy6vbn93.1/nmdc_wfmgas-11-dy6vbn93.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1dac6277001801cf8dc16abbe75f3737 nmdc:dobj-11-dq2m9j77 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dy6vbn93.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:017fc35ff598908f83ca5fb0fde9110b +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfmgas-11-dy6vbn93.1/nmdc_wfmgas-11-dy6vbn93.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:017fc35ff598908f83ca5fb0fde9110b nmdc:dobj-11-wywd9j57 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfmgas-11-dy6vbn93.1/nmdc_wfmgas-11-dy6vbn93.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d68a48fda84cf1372ec79b764a75224 nmdc:dobj-11-krsvhq02 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-dy6vbn93.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a1d0f5db097bc014964d4e51b4ce60dc nmdc:wfmgas-11-dy6vbn93.1 +INFO:root:New activity id created for nmdc:omprc-11-xf3qmp78 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-dpk82579.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfmgas-11-dpk82579.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:17da0a37b19ab29f2a787b23eb11d9ef +INFO:root:New file path computed for Assembly Contigs: 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file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-dpvyzx08.1/nmdc_wfrbt-11-dpvyzx08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f537c073ac18303f4d959567bc3152c7 nmdc:dobj-11-7yyz7764 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dpvyzx08.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:377d6ab7623774a1031cb27593ae8bb1 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-dpvyzx08.1/nmdc_wfrbt-11-dpvyzx08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:377d6ab7623774a1031cb27593ae8bb1 nmdc:dobj-11-gqw5dh56 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dpvyzx08.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c11a32f98beddc16dd23640032df8ed2 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-dpvyzx08.1/nmdc_wfrbt-11-dpvyzx08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c11a32f98beddc16dd23640032df8ed2 nmdc:dobj-11-qxf45e33 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dpvyzx08.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b839eb747ea238f57bc8bfb0de3861b6 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: 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nmdc_wfrbt-11-dpvyzx08.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:57c1f4ca1f2727ac1a9f3e5a12847b8f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-dpvyzx08.1/nmdc_wfrbt-11-dpvyzx08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:57c1f4ca1f2727ac1a9f3e5a12847b8f nmdc:dobj-11-qzwscy69 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dpvyzx08.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d36ce032cd7227f7ac1dd5f0b3686468 nmdc:wfrbt-11-dpvyzx08.1 +INFO:root:New activity id created for nmdc:omprc-11-xf3qmp78 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-pcs63k47.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-pcs63k47.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f8463edf36f651d39583d0ac8a584c7b +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-pcs63k47.1/nmdc_wfrbt-11-pcs63k47.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f8463edf36f651d39583d0ac8a584c7b nmdc:dobj-11-46sm3455 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pcs63k47.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1359eec1858ea0cd63ba9597ed87eb21 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-pcs63k47.1/nmdc_wfrbt-11-pcs63k47.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1359eec1858ea0cd63ba9597ed87eb21 nmdc:dobj-11-ma5mxx17 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pcs63k47.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46c605fe8c8540ffb2a181c49e41ccc4 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-pcs63k47.1/nmdc_wfrbt-11-pcs63k47.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46c605fe8c8540ffb2a181c49e41ccc4 nmdc:dobj-11-scprrr97 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-pcs63k47.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1d0f5f21efab48f0ab837e0071ee0249 +INFO:root:New file path computed for Centrifuge Taxonomic 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path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f752fb4feb919c85eb90a50eeed2ff5 nmdc:dobj-11-qtpbjv81 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:37948d1d94d8eab779ac7540e66f7512 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:37948d1d94d8eab779ac7540e66f7512 nmdc:dobj-11-j6np0b60 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:addbb8fb60d01b4bb126dbcacd8ebec0 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:addbb8fb60d01b4bb126dbcacd8ebec0 nmdc:dobj-11-3f0x5e58 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f7a04fa88eec21dfa7ef9f9ee5731b99 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7a04fa88eec21dfa7ef9f9ee5731b99 nmdc:dobj-11-k448jm85 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:752b8145f8b64cf2abe69c2bdb0b33f3 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:752b8145f8b64cf2abe69c2bdb0b33f3 nmdc:dobj-11-yfa20n64 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:570839a93cf805bc109113e9b9cecdea +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:570839a93cf805bc109113e9b9cecdea nmdc:dobj-11-avza6v39 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:225b6e28f7a6fdcbd1cbc0fe9a9c08b8 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:225b6e28f7a6fdcbd1cbc0fe9a9c08b8 nmdc:dobj-11-9armsz94 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:65e2fe9c3849efd71a9138b42999a696 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:65e2fe9c3849efd71a9138b42999a696 nmdc:dobj-11-7f69bm45 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e5df6df6b0cff667571a79a0b353f615 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-xf3qmp78/nmdc:wfrbt-11-h9qbd287.1/nmdc_wfrbt-11-h9qbd287.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e5df6df6b0cff667571a79a0b353f615 nmdc:dobj-11-cd9ztr10 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-xf3qmp78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h9qbd287.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a1d0f5db097bc014964d4e51b4ce60dc nmdc:wfrbt-11-h9qbd287.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-xf3qmp78 +INFO:root:omics_processing_id: nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f7f585f19c4c3d6001486f878c6abe70 nmdc:dobj-11-krm61r11 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f0aeca3324c59af528f6bece4fec4c6 nmdc:dobj-11-p04fqw89 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e5a209cb6bf2e452260e08bfb5a627d nmdc:dobj-11-fsjxm591 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8aec84ae63fc82462726575f5bc3a906 nmdc:dobj-11-hrz5tt95 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zpn99058 +INFO:root:New activity id created for nmdc:omprc-11-zpn99058 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-xhepg860.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-xhepg860.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:449d3c92d08e38839e9102b74136c951 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-xhepg860.1/nmdc_wfrqc-11-xhepg860.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:449d3c92d08e38839e9102b74136c951 nmdc:dobj-11-665zdj83 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xhepg860.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:16f8c28be7a3027c36ff5d8fc038e182 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-xhepg860.1/nmdc_wfrqc-11-xhepg860.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:16f8c28be7a3027c36ff5d8fc038e182 nmdc:dobj-11-g1kkve49 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-xhepg860.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:de944aa427548d7d8853f486b48a22de nmdc:wfrqc-11-xhepg860.1 +INFO:root:New activity id created for nmdc:omprc-11-zpn99058 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-4an5sq28.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-4an5sq28.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58a86dd494d076b43657337ec696b1f9 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-4an5sq28.1/nmdc_wfrqc-11-4an5sq28.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58a86dd494d076b43657337ec696b1f9 nmdc:dobj-11-5v3cja79 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4an5sq28.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b66b8e1559ae8630d80c3675f528b302 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-4an5sq28.1/nmdc_wfrqc-11-4an5sq28.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b66b8e1559ae8630d80c3675f528b302 nmdc:dobj-11-jrzbd746 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4an5sq28.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0260377e388537586dd4bc999b7d2430 nmdc:wfrqc-11-4an5sq28.1 +INFO:root:New activity id created for nmdc:omprc-11-zpn99058 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-yr38b663.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-yr38b663.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9383b248ebfaacfba1123aab53fdac5f +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-yr38b663.1/nmdc_wfrqc-11-yr38b663.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9383b248ebfaacfba1123aab53fdac5f nmdc:dobj-11-x78dpk86 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-yr38b663.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c56452cacd9a3e2dc8a63c0c0907069b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-yr38b663.1/nmdc_wfrqc-11-yr38b663.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c56452cacd9a3e2dc8a63c0c0907069b nmdc:dobj-11-fqtwqd21 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-yr38b663.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:38a36020de5449d0b6631dbf0f5c4143 nmdc:wfrqc-11-yr38b663.1 +INFO:root:New activity id created for nmdc:omprc-11-zpn99058 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-s5jv3445.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-s5jv3445.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f4bb9a589f74ee73e111699a7fddc18 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-s5jv3445.1/nmdc_wfrqc-11-s5jv3445.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f4bb9a589f74ee73e111699a7fddc18 nmdc:dobj-11-1wptyv17 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-s5jv3445.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b9e0939a073db76fea4a2fd5b616eca +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfrqc-11-s5jv3445.1/nmdc_wfrqc-11-s5jv3445.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b9e0939a073db76fea4a2fd5b616eca nmdc:dobj-11-6fqage42 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-s5jv3445.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bc2f8885b7a9398b2e145f6177f140e2 nmdc:wfrqc-11-s5jv3445.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zpn99058 +INFO:root:New activity id created for nmdc:omprc-11-zpn99058 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8bsr3b96.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-8bsr3b96.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd8f59eec1e5acf5269b001ffb42bc80 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-8bsr3b96.1/nmdc_wfmgas-11-8bsr3b96.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd8f59eec1e5acf5269b001ffb42bc80 nmdc:dobj-11-jmpwnn45 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8bsr3b96.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bfc4df7f56c86d4abf1b7d17a79dd16e +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-8bsr3b96.1/nmdc_wfmgas-11-8bsr3b96.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bfc4df7f56c86d4abf1b7d17a79dd16e nmdc:dobj-11-1f7rwn72 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8bsr3b96.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa1976ab2270e6d70c54355a9ad14cef +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-8bsr3b96.1/nmdc_wfmgas-11-8bsr3b96.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa1976ab2270e6d70c54355a9ad14cef nmdc:dobj-11-a5h2dz97 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8bsr3b96.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b680ed8dacb55212b4b05f72531a8f65 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-8bsr3b96.1/nmdc_wfmgas-11-8bsr3b96.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b680ed8dacb55212b4b05f72531a8f65 nmdc:dobj-11-nwhaab62 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-8sh80n31.1/nmdc_wfmgas-11-8sh80n31.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:856d49e0ca0b1e322d89482378d10c26 nmdc:dobj-11-ady6yb84 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8sh80n31.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2b028fcabe64e9a0d8cf0d59e5df527 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-8sh80n31.1/nmdc_wfmgas-11-8sh80n31.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2b028fcabe64e9a0d8cf0d59e5df527 nmdc:dobj-11-yd122552 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8sh80n31.1_assembly.agp 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scaffold fasta for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vdzyhn92.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:872afb7e4e6b708fe6cfb87647e1fe97 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-vdzyhn92.1/nmdc_wfmgas-11-vdzyhn92.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:872afb7e4e6b708fe6cfb87647e1fe97 nmdc:dobj-11-k5yqh943 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zpn99058 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vdzyhn92.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:906f21103f30fbaf46bb5dfee104e8ea +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zpn99058/nmdc:wfmgas-11-vdzyhn92.1/nmdc_wfmgas-11-vdzyhn92.1_assembly.agp 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Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7kr2jb76/nmdc:wfrqc-11-syzx1m20.1/nmdc_wfrqc-11-syzx1m20.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:165e606741698f3b4eed934cb4e3f23a nmdc:dobj-11-ry3tgq61 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-7kr2jb76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-syzx1m20.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:89173500fd64bc39898c4002cf245870 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7kr2jb76/nmdc:wfrqc-11-syzx1m20.1/nmdc_wfrqc-11-syzx1m20.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:89173500fd64bc39898c4002cf245870 nmdc:dobj-11-d17rb054 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-7kr2jb76 +INFO:nmdc_automation.re_iding.base:new_filename: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-7kr2jb76/nmdc:wfmgas-11-ccs9ry71.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b5c947e1de69696b10e14d6fdb9d7034 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7kr2jb76/nmdc:wfmgas-11-ccs9ry71.1/nmdc_wfmgas-11-ccs9ry71.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5c947e1de69696b10e14d6fdb9d7034 nmdc:dobj-11-qbpaaw17 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-7kr2jb76 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ccs9ry71.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7132570c2fae5b65fdb354e835ad5c8f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7kr2jb76/nmdc:wfmgas-11-ccs9ry71.1/nmdc_wfmgas-11-ccs9ry71.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7132570c2fae5b65fdb354e835ad5c8f 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scaffold fasta for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v54skn75.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebed2a8c8163dc0919454297b9c3b970 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfmgas-11-v54skn75.1/nmdc_wfmgas-11-v54skn75.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebed2a8c8163dc0919454297b9c3b970 nmdc:dobj-11-fstvg276 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v54skn75.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:947e919f45247175ee9d1ee8135fa15a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfmgas-11-v54skn75.1/nmdc_wfmgas-11-v54skn75.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:947e919f45247175ee9d1ee8135fa15a nmdc:dobj-11-b25t1m07 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v54skn75.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c36aacef7affe7d5670033c9473ed930 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfmgas-11-v54skn75.1/nmdc_wfmgas-11-v54skn75.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c36aacef7affe7d5670033c9473ed930 nmdc:dobj-11-mve2j376 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v54skn75.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:d83ebbdf8862678b161248d6e09f42bb nmdc:wfmgas-11-v54skn75.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-9nac0407 +INFO:root:New activity id created for nmdc:omprc-11-9nac0407 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-42kvtt81.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5b8889ecb1eab034fb3efe812ccddc7 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5b8889ecb1eab034fb3efe812ccddc7 nmdc:dobj-11-1s0r3q65 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb7f4d486999692b6f9f429b9a1bbdc7 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb7f4d486999692b6f9f429b9a1bbdc7 nmdc:dobj-11-cj0e6106 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d19c1fe2a816665b9460f60c8fc6192f +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d19c1fe2a816665b9460f60c8fc6192f nmdc:dobj-11-5zvg9579 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0a6138d30fd444652acc9839591cae96 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a6138d30fd444652acc9839591cae96 nmdc:dobj-11-h6caz897 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3634d54364df7664e980dfa25b7efb1 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b3634d54364df7664e980dfa25b7efb1 nmdc:dobj-11-8bj8ca91 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:40ef4bff468e07366b6956f06d95fca6 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:40ef4bff468e07366b6956f06d95fca6 nmdc:dobj-11-xeexsq11 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58c67eee51d86b08c6a8ce869515c255 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58c67eee51d86b08c6a8ce869515c255 nmdc:dobj-11-86ecg321 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b617083b6ac6daf5f3def6113dcbd3a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b617083b6ac6daf5f3def6113dcbd3a nmdc:dobj-11-zwtbey05 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:721f1d0d53a8a53621c41496831fe5af +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9nac0407/nmdc:wfrbt-11-42kvtt81.1/nmdc_wfrbt-11-42kvtt81.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:721f1d0d53a8a53621c41496831fe5af nmdc:dobj-11-jc6ce712 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9nac0407 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-42kvtt81.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d83ebbdf8862678b161248d6e09f42bb nmdc:wfrbt-11-42kvtt81.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9nac0407 +INFO:root:omics_processing_id: nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14e40127016da0ad47630a7092b9809f nmdc:dobj-11-4hh22t43 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c0c26f6d20b386e63b2b87af20dec27 nmdc:dobj-11-b0qdkn32 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4f6df0b7a2e9f4de37bf224b41bfc854 nmdc:dobj-11-jzk5qz85 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0dz0wj57 +INFO:root:New activity id created for nmdc:omprc-11-0dz0wj57 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-5c4wz182.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-5c4wz182.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a40acb6c7daf6318213d20824ec751b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-5c4wz182.1/nmdc_wfrqc-11-5c4wz182.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a40acb6c7daf6318213d20824ec751b nmdc:dobj-11-fx8cxp57 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5c4wz182.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2945166ff29153b24014d22dc2cc5c02 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-5c4wz182.1/nmdc_wfrqc-11-5c4wz182.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2945166ff29153b24014d22dc2cc5c02 nmdc:dobj-11-qr8w3165 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-5c4wz182.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:cd53d94cd24a985ad8b65ba22b946f85 nmdc:wfrqc-11-5c4wz182.1 +INFO:root:New activity id created for nmdc:omprc-11-0dz0wj57 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fz78tk39.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-fz78tk39.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f39963c8efedb0bc97db97110daf0b1a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-fz78tk39.1/nmdc_wfrqc-11-fz78tk39.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f39963c8efedb0bc97db97110daf0b1a nmdc:dobj-11-amj6s114 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fz78tk39.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5452473ed81feb515cfd5ec704b699a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-fz78tk39.1/nmdc_wfrqc-11-fz78tk39.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5452473ed81feb515cfd5ec704b699a nmdc:dobj-11-0zdgvk45 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fz78tk39.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee nmdc:wfrqc-11-fz78tk39.1 +INFO:root:New activity id created for nmdc:omprc-11-0dz0wj57 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-0wqqza21.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-0wqqza21.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:442945e6df29a49b2f5d6b40933e79b5 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-0wqqza21.1/nmdc_wfrqc-11-0wqqza21.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:442945e6df29a49b2f5d6b40933e79b5 nmdc:dobj-11-a0dfm390 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-0wqqza21.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:42fab0117c0ff4a7831ef82bb002645e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrqc-11-0wqqza21.1/nmdc_wfrqc-11-0wqqza21.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:42fab0117c0ff4a7831ef82bb002645e nmdc:dobj-11-8ym6bs38 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: 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nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ymvre994.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:cd53d94cd24a985ad8b65ba22b946f85 nmdc:wfrbt-11-ymvre994.1 +INFO:root:New activity id created for nmdc:omprc-11-0dz0wj57 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-4gjtgj48.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fde0776096f3d22e1574b84f94e19bc6 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fde0776096f3d22e1574b84f94e19bc6 nmdc:dobj-11-83begm23 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:213bef2bd82092b7e60ca18a5d1af87a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:213bef2bd82092b7e60ca18a5d1af87a nmdc:dobj-11-qn7rad05 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5cc382643c1758f88fe6695173c3430e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5cc382643c1758f88fe6695173c3430e nmdc:dobj-11-43qkz203 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b011b494ba9ed274dd25514f740b10ca +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b011b494ba9ed274dd25514f740b10ca nmdc:dobj-11-130hf609 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d39b38863b466f0ace948c0f8920079 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d39b38863b466f0ace948c0f8920079 nmdc:dobj-11-e9pczc35 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:25bb90615ae06c984e056e1ed385fa62 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:25bb90615ae06c984e056e1ed385fa62 nmdc:dobj-11-p2eshp52 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c3e5a06b8954b6595c4760dbe45ac62 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c3e5a06b8954b6595c4760dbe45ac62 nmdc:dobj-11-e7284f88 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a4a6f411642b47eae3d96f91421c8c8e +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a4a6f411642b47eae3d96f91421c8c8e nmdc:dobj-11-gfsnaq44 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:14aa790457029fc61ade6b5f5a548c96 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-4gjtgj48.1/nmdc_wfrbt-11-4gjtgj48.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:14aa790457029fc61ade6b5f5a548c96 nmdc:dobj-11-zn22b283 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4gjtgj48.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:e95cfb9e0c99e3fb0f1131ab255a46ee nmdc:wfrbt-11-4gjtgj48.1 +INFO:root:New activity id created for nmdc:omprc-11-0dz0wj57 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jnjhvk53.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ca5a7e7d03fac2281558643a9cbbe290 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ca5a7e7d03fac2281558643a9cbbe290 nmdc:dobj-11-qwfmyq76 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ed1f433440b4c79252d05559b99086b +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ed1f433440b4c79252d05559b99086b nmdc:dobj-11-msh32881 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:87e096f84a58bc4b8905fb595aa69ef2 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:87e096f84a58bc4b8905fb595aa69ef2 nmdc:dobj-11-36e02e45 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9849faf8adbe7826c91193a683f785b7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9849faf8adbe7826c91193a683f785b7 nmdc:dobj-11-5yz70j74 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:49483c1542a15742a84f20fb1bb14c31 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:49483c1542a15742a84f20fb1bb14c31 nmdc:dobj-11-gxph6b19 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:56ffe736ff9827753f90243b3c10e792 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:56ffe736ff9827753f90243b3c10e792 nmdc:dobj-11-s18ftx14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9b15c2ad5c37edf5fb8a01d0a15e7dab +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9b15c2ad5c37edf5fb8a01d0a15e7dab nmdc:dobj-11-578p4v91 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53b93e561324d6df84970e3d04ee6481 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53b93e561324d6df84970e3d04ee6481 nmdc:dobj-11-bjfhx447 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:666da95db8f2ccea3e82b20728766db0 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0dz0wj57/nmdc:wfrbt-11-jnjhvk53.1/nmdc_wfrbt-11-jnjhvk53.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:666da95db8f2ccea3e82b20728766db0 nmdc:dobj-11-h2msen55 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-0dz0wj57 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jnjhvk53.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2feeb1b123648e8f5393d943b723e78e nmdc:wfrbt-11-jnjhvk53.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-0dz0wj57 +INFO:root:omics_processing_id: nmdc:omprc-11-qjk04g21 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e63d328bc9bf66cdf6c51204cb941d46 nmdc:dobj-11-r3g2yh28 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19bd893f3b1d83c1a0c0aa1903f27de3 nmdc:dobj-11-k6pxcp32 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-qjk04g21 +INFO:root:New activity id created for nmdc:omprc-11-qjk04g21 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8phbf259.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qjk04g21/nmdc:wfrqc-11-8phbf259.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22a7439c1dff19b311665dcaefadd0db +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qjk04g21/nmdc:wfrqc-11-8phbf259.1/nmdc_wfrqc-11-8phbf259.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22a7439c1dff19b311665dcaefadd0db nmdc:dobj-11-qdd1wy92 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-qjk04g21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8phbf259.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bafbffcb53bbfdeb4d27a8960d248b81 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qjk04g21/nmdc:wfrqc-11-8phbf259.1/nmdc_wfrqc-11-8phbf259.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bafbffcb53bbfdeb4d27a8960d248b81 nmdc:dobj-11-7k6esa80 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-qjk04g21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8phbf259.1_filterStats.txt 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nmdc:5890d59f1d4631a2290d9e0a65dac9ed +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qjk04g21/nmdc:wfrbt-11-bv5gnr21.1/nmdc_wfrbt-11-bv5gnr21.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5890d59f1d4631a2290d9e0a65dac9ed nmdc:dobj-11-ah5aab31 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-qjk04g21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bv5gnr21.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fa8ece1882279e09fa43c61621cac967 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qjk04g21/nmdc:wfrbt-11-bv5gnr21.1/nmdc_wfrbt-11-bv5gnr21.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fa8ece1882279e09fa43c61621cac967 nmdc:dobj-11-8j22ce61 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-qjk04g21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bv5gnr21.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3205bc493c346711c619a7b3367a02de +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qjk04g21/nmdc:wfrbt-11-bv5gnr21.1/nmdc_wfrbt-11-bv5gnr21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3205bc493c346711c619a7b3367a02de nmdc:dobj-11-586wxm09 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-qjk04g21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bv5gnr21.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02dea50b50f4b3d3f88f39621020b7bf +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qjk04g21/nmdc:wfrbt-11-bv5gnr21.1/nmdc_wfrbt-11-bv5gnr21.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02dea50b50f4b3d3f88f39621020b7bf nmdc:dobj-11-enr06v55 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-qjk04g21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bv5gnr21.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:618dff9f6f7ba7268551b7a09c1ef62d +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-qjk04g21/nmdc:wfrbt-11-bv5gnr21.1/nmdc_wfrbt-11-bv5gnr21.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:618dff9f6f7ba7268551b7a09c1ef62d nmdc:dobj-11-89p0wr61 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-qjk04g21 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bv5gnr21.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fa880e6ce942e17e43322b7c61208af4 nmdc:wfrbt-11-bv5gnr21.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-qjk04g21 +INFO:root:omics_processing_id: nmdc:omprc-11-0hzy6t26 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20a7f00f17d4a251bb70b80bd109c8e7 nmdc:dobj-11-2j99rj45 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0hzy6t26 +INFO:root:New activity id created for nmdc:omprc-11-0hzy6t26 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-a6pw4489.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0hzy6t26/nmdc:wfrqc-11-a6pw4489.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eac9031563f8e64cc2a9808a76d07434 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0hzy6t26/nmdc:wfrqc-11-a6pw4489.1/nmdc_wfrqc-11-a6pw4489.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eac9031563f8e64cc2a9808a76d07434 nmdc:dobj-11-kd6y6x17 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0hzy6t26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-a6pw4489.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3843ceca122fa9fc4ca42d0afbccbb50 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0hzy6t26/nmdc:wfrqc-11-a6pw4489.1/nmdc_wfrqc-11-a6pw4489.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3843ceca122fa9fc4ca42d0afbccbb50 nmdc:dobj-11-9v85tj36 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0hzy6t26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-a6pw4489.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:539e08bbfd509979d50fb41dadf78bb0 nmdc:wfrqc-11-a6pw4489.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-0hzy6t26 +INFO:root:New activity id created for nmdc:omprc-11-0hzy6t26 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-4pj0w532.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0hzy6t26/nmdc:wfmgas-11-4pj0w532.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c06b4858c4fb2648aeb10001bfbb75c8 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0hzy6t26/nmdc:wfmgas-11-4pj0w532.1/nmdc_wfmgas-11-4pj0w532.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c06b4858c4fb2648aeb10001bfbb75c8 nmdc:dobj-11-7ejfea63 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-0hzy6t26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pj0w532.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:273a35962ef332ad610ee7c3c18e376c +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0hzy6t26/nmdc:wfmgas-11-4pj0w532.1/nmdc_wfmgas-11-4pj0w532.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:273a35962ef332ad610ee7c3c18e376c nmdc:dobj-11-yfj92d67 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-0hzy6t26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pj0w532.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3c4635af4af4f4853974686241575007 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0hzy6t26/nmdc:wfmgas-11-4pj0w532.1/nmdc_wfmgas-11-4pj0w532.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3c4635af4af4f4853974686241575007 nmdc:dobj-11-r6snvf04 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-0hzy6t26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pj0w532.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ad36832ac98d2007c42009c2081f918 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0hzy6t26/nmdc:wfmgas-11-4pj0w532.1/nmdc_wfmgas-11-4pj0w532.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ad36832ac98d2007c42009c2081f918 nmdc:dobj-11-6q3f3365 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-0hzy6t26 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-4pj0w532.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0561fd5503a94ece559bee6ddab1f66 +INFO:root:New file path computed for Assembly Coverage BAM: 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activity id created for nmdc:omprc-11-6z46yd72 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zkj6sn98.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrqc-11-zkj6sn98.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a23a1f97c2a11529afd5e2d370ef233f +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrqc-11-zkj6sn98.1/nmdc_wfrqc-11-zkj6sn98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a23a1f97c2a11529afd5e2d370ef233f nmdc:dobj-11-84xhcf17 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-zkj6sn98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:636a45d9f67e26d5b239fbdb2426f0fc +INFO:root:New file path computed for QC Statistics: 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+INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:610427862c6abc10e3171ef01e7cc6af +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-5rtbpw32.1/nmdc_wfrbt-11-5rtbpw32.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:610427862c6abc10e3171ef01e7cc6af nmdc:dobj-11-yq5fx837 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5rtbpw32.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:070f773c0d974aea9d739cff0ddd00f1 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-5rtbpw32.1/nmdc_wfrbt-11-5rtbpw32.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:070f773c0d974aea9d739cff0ddd00f1 nmdc:dobj-11-9mxrbg52 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5rtbpw32.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:741e47d4030dca5baf9f8fbc150fc1bc +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-5rtbpw32.1/nmdc_wfrbt-11-5rtbpw32.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:741e47d4030dca5baf9f8fbc150fc1bc nmdc:dobj-11-b8c73p53 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5rtbpw32.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:63a0e2e9df893439058e52913f606fb0 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-5rtbpw32.1/nmdc_wfrbt-11-5rtbpw32.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:63a0e2e9df893439058e52913f606fb0 nmdc:dobj-11-dwz3sh58 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5rtbpw32.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4821653fa4c20feb7454095a58ecef73 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-5rtbpw32.1/nmdc_wfrbt-11-5rtbpw32.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4821653fa4c20feb7454095a58ecef73 nmdc:dobj-11-z2evph93 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5rtbpw32.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7fcec264d26182cf4e2cf14d51a55c3f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-5rtbpw32.1/nmdc_wfrbt-11-5rtbpw32.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7fcec264d26182cf4e2cf14d51a55c3f nmdc:dobj-11-kxkf3w48 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5rtbpw32.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9021dc34f9542cc3364b753f05f9cd51 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-5rtbpw32.1/nmdc_wfrbt-11-5rtbpw32.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9021dc34f9542cc3364b753f05f9cd51 nmdc:dobj-11-fqdsbb90 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5rtbpw32.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:53827171a86f8ab2115a1ea8b2a9bd95 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-5rtbpw32.1/nmdc_wfrbt-11-5rtbpw32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53827171a86f8ab2115a1ea8b2a9bd95 nmdc:dobj-11-29gncd02 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-5rtbpw32.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:78e09701d462b85b6ae8787d0b3922c9 nmdc:wfrbt-11-5rtbpw32.1 +INFO:root:New activity id created for nmdc:omprc-11-6z46yd72 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-3eb83f90.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dcb247db8ea1150fcbf3f021677029c4 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1/nmdc_wfrbt-11-3eb83f90.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dcb247db8ea1150fcbf3f021677029c4 nmdc:dobj-11-6qwcjy89 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3eb83f90.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:044cb8936ee1373f20cf59f80d921c06 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1/nmdc_wfrbt-11-3eb83f90.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:044cb8936ee1373f20cf59f80d921c06 nmdc:dobj-11-73qqbe93 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3eb83f90.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7e5ae45dfdc60c2d018c9af460a0c920 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1/nmdc_wfrbt-11-3eb83f90.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7e5ae45dfdc60c2d018c9af460a0c920 nmdc:dobj-11-dfmewe62 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3eb83f90.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f18a65b6ca6ad68c723a28e94c35de75 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1/nmdc_wfrbt-11-3eb83f90.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f18a65b6ca6ad68c723a28e94c35de75 nmdc:dobj-11-sh17c135 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3eb83f90.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e104bb429efc3244e760be1aaed5d9b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1/nmdc_wfrbt-11-3eb83f90.1_centrifuge_report.tsv 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file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1/nmdc_wfrbt-11-3eb83f90.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a73dd41a7488a4b6d24d4a8f98356580 nmdc:dobj-11-zex1nh48 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3eb83f90.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c7a5c8621edb44e9541c26dacd199403 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1/nmdc_wfrbt-11-3eb83f90.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7a5c8621edb44e9541c26dacd199403 nmdc:dobj-11-nst2kd58 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3eb83f90.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96f32b6cd9ac6cc10a20b37ac17f4cec +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z46yd72/nmdc:wfrbt-11-3eb83f90.1/nmdc_wfrbt-11-3eb83f90.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96f32b6cd9ac6cc10a20b37ac17f4cec nmdc:dobj-11-3yhezv19 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-6z46yd72 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3eb83f90.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5feaf75791ef10ef1f0b7872734d9d91 nmdc:wfrbt-11-3eb83f90.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-6z46yd72 +INFO:root:omics_processing_id: nmdc:omprc-11-j6hha503 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:53afdcc2f537c18b3c4112386deb5f64 nmdc:dobj-11-16fweq95 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2ebf2fd9287cafe9925a74f51b69c510 nmdc:dobj-11-b9w35t82 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-j6hha503 +INFO:root:New activity id created for nmdc:omprc-11-j6hha503 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-gb5wvt44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j6hha503/nmdc:wfrqc-11-gb5wvt44.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:109159ee6dbd6898238d0e3da1d489e5 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j6hha503/nmdc:wfrqc-11-gb5wvt44.1/nmdc_wfrqc-11-gb5wvt44.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:109159ee6dbd6898238d0e3da1d489e5 nmdc:dobj-11-kw52vw82 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j6hha503/nmdc:wfrbt-11-msfna872.1/nmdc_wfrbt-11-msfna872.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:708b7cdb169f4795eaa572ea30d5abd5 nmdc:dobj-11-778fmh22 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-j6hha503 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-msfna872.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:465d9371050d42954bd20fc7e05722c7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j6hha503/nmdc:wfrbt-11-msfna872.1/nmdc_wfrbt-11-msfna872.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:465d9371050d42954bd20fc7e05722c7 nmdc:dobj-11-as71qa14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for 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for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tptb8f25/nmdc:wfrqc-11-4jm55655.1/nmdc_wfrqc-11-4jm55655.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8be517787347e73f42ed7d0ff73dfe38 nmdc:dobj-11-bxg51s10 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-tptb8f25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4jm55655.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0fad0153ad6a5f2a0bc4301d06a904d1 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tptb8f25/nmdc:wfrqc-11-4jm55655.1/nmdc_wfrqc-11-4jm55655.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0fad0153ad6a5f2a0bc4301d06a904d1 nmdc:dobj-11-xshb3125 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-tptb8f25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-4jm55655.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e nmdc:wfrqc-11-4jm55655.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-tptb8f25 +INFO:root:New activity id created for nmdc:omprc-11-tptb8f25 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-j2eh0f67.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tptb8f25/nmdc:wfmgas-11-j2eh0f67.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9da405c842e1c5dfe00896138dc7dee8 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tptb8f25/nmdc:wfmgas-11-j2eh0f67.1/nmdc_wfmgas-11-j2eh0f67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9da405c842e1c5dfe00896138dc7dee8 nmdc:dobj-11-04pez141 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-tptb8f25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2eh0f67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f42b85db76c5184c7618f7cf145d715a +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tptb8f25/nmdc:wfmgas-11-j2eh0f67.1/nmdc_wfmgas-11-j2eh0f67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f42b85db76c5184c7618f7cf145d715a nmdc:dobj-11-jwr6jc08 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tptb8f25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2eh0f67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d84d170d89488fca8d89ba8fec4d19da +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tptb8f25/nmdc:wfmgas-11-j2eh0f67.1/nmdc_wfmgas-11-j2eh0f67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d84d170d89488fca8d89ba8fec4d19da nmdc:dobj-11-q0pq5904 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-tptb8f25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2eh0f67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:928c991cb61b15a822919c3ca1172cc0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tptb8f25/nmdc:wfmgas-11-j2eh0f67.1/nmdc_wfmgas-11-j2eh0f67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:928c991cb61b15a822919c3ca1172cc0 nmdc:dobj-11-144smj44 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-tptb8f25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2eh0f67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:288d37079a050e97d582e73a249865d8 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tptb8f25/nmdc:wfmgas-11-j2eh0f67.1/nmdc_wfmgas-11-j2eh0f67.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:288d37079a050e97d582e73a249865d8 nmdc:dobj-11-73973411 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-tptb8f25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-j2eh0f67.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:10d0d0c2c908538db6d9b3de0d4fcb1e nmdc:wfmgas-11-j2eh0f67.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-tptb8f25 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-tptb8f25 +INFO:root:omics_processing_id: nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64f55af4ae6631117cfea17626fcebd7 nmdc:dobj-11-y5pw6241 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-edr8dc22 +INFO:root:New activity id created for nmdc:omprc-11-edr8dc22 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-fwcw6y77.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfrqc-11-fwcw6y77.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:540309d5ef126bfcb18ac6934740f626 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfrqc-11-fwcw6y77.1/nmdc_wfrqc-11-fwcw6y77.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:540309d5ef126bfcb18ac6934740f626 nmdc:dobj-11-6d9atc17 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fwcw6y77.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0ec9bf124301ae7b8bbdc1b375686f8 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfrqc-11-fwcw6y77.1/nmdc_wfrqc-11-fwcw6y77.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0ec9bf124301ae7b8bbdc1b375686f8 nmdc:dobj-11-7xdgck11 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-fwcw6y77.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:646232463a320f632905db3739ca9d3e nmdc:wfrqc-11-fwcw6y77.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-edr8dc22 +INFO:root:New activity id created for nmdc:omprc-11-edr8dc22 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vww6qq56.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfmgas-11-vww6qq56.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74dbce23fc112f9a0fc737ba9951dca1 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfmgas-11-vww6qq56.1/nmdc_wfmgas-11-vww6qq56.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74dbce23fc112f9a0fc737ba9951dca1 nmdc:dobj-11-ftxc7f80 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vww6qq56.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:15023cb60e06ba34b612e1bd4eda836e +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfmgas-11-vww6qq56.1/nmdc_wfmgas-11-vww6qq56.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:15023cb60e06ba34b612e1bd4eda836e nmdc:dobj-11-txknd764 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vww6qq56.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f3491ffa00b1a6b25768635b431ecf60 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfmgas-11-vww6qq56.1/nmdc_wfmgas-11-vww6qq56.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f3491ffa00b1a6b25768635b431ecf60 nmdc:dobj-11-31062j44 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vww6qq56.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c17dc03ad05a856566b26c3ae48d9d50 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfmgas-11-vww6qq56.1/nmdc_wfmgas-11-vww6qq56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c17dc03ad05a856566b26c3ae48d9d50 nmdc:dobj-11-4bc4tz51 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vww6qq56.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6ddee8b7406a51a92df0dc3712aa91e7 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-edr8dc22/nmdc:wfmgas-11-vww6qq56.1/nmdc_wfmgas-11-vww6qq56.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ddee8b7406a51a92df0dc3712aa91e7 nmdc:dobj-11-0q5y3b11 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vww6qq56.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:646232463a320f632905db3739ca9d3e nmdc:wfmgas-11-vww6qq56.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-edr8dc22 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-edr8dc22 +INFO:root:omics_processing_id: nmdc:omprc-11-c117p064 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23e5e4db9bc50bfe1f4c589ad132311e nmdc:dobj-11-ttft8a48 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a9bfef334c1803d2985e25dc52c2c9d nmdc:dobj-11-1n5seb98 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-c117p064 +INFO:root:New activity id created for nmdc:omprc-11-c117p064 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ct86c047.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c117p064/nmdc:wfrqc-11-ct86c047.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d52baf6f767835e4f5dcc3919573f1a5 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c117p064/nmdc:wfrqc-11-ct86c047.1/nmdc_wfrqc-11-ct86c047.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d52baf6f767835e4f5dcc3919573f1a5 nmdc:dobj-11-b0mrav98 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-c117p064 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ct86c047.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b83f43ddefbbe61bbad1533aaacc34e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c117p064/nmdc:wfrqc-11-ct86c047.1/nmdc_wfrqc-11-ct86c047.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b83f43ddefbbe61bbad1533aaacc34e nmdc:dobj-11-hydxjy54 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-c117p064 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-ct86c047.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:426ebdb57f0a26f83c50fc2e689487a7 nmdc:wfrqc-11-ct86c047.1 +INFO:root:New activity id created for nmdc:omprc-11-c117p064 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mfbtrp71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c117p064/nmdc:wfrqc-11-mfbtrp71.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e231a060707ff38894bc17cce4fa7ad4 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c117p064/nmdc:wfrqc-11-mfbtrp71.1/nmdc_wfrqc-11-mfbtrp71.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e231a060707ff38894bc17cce4fa7ad4 nmdc:dobj-11-pdnfmp12 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-c117p064 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mfbtrp71.1_filtered.fastq.gz 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-c117p064/nmdc:wfmgas-11-myw7z475.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5257deeab70745263e1d494588ec532 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c117p064/nmdc:wfmgas-11-myw7z475.1/nmdc_wfmgas-11-myw7z475.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5257deeab70745263e1d494588ec532 nmdc:dobj-11-rw18nr94 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-c117p064 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-myw7z475.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:927fc292a947b2ed8da367a6778d0c53 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-c117p064/nmdc:wfmgas-11-myw7z475.1/nmdc_wfmgas-11-myw7z475.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:927fc292a947b2ed8da367a6778d0c53 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file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-eb0yq579/nmdc:wfrbt-11-bnqj2830.1/nmdc_wfrbt-11-bnqj2830.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6c32651f291c5790737b364e52e17d32 nmdc:dobj-11-hezpqt40 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-eb0yq579 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bnqj2830.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a854114cf24a915628040fb1ce6424ba +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-eb0yq579/nmdc:wfrbt-11-bnqj2830.1/nmdc_wfrbt-11-bnqj2830.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a854114cf24a915628040fb1ce6424ba nmdc:dobj-11-4vsrj123 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for 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nmdc:5f88b1b03890deff2122ded25ff5fd0b +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epwrz448/nmdc:wfrbt-11-6ddczg96.1/nmdc_wfrbt-11-6ddczg96.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f88b1b03890deff2122ded25ff5fd0b nmdc:dobj-11-yt2mpe53 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-epwrz448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6ddczg96.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13f5731171b09cb90f38af39c736f87b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-epwrz448/nmdc:wfrbt-11-6ddczg96.1/nmdc_wfrbt-11-6ddczg96.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13f5731171b09cb90f38af39c736f87b nmdc:dobj-11-ny2p7a85 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-epwrz448 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-6ddczg96.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0b6d711f7a4d3a2bc02a2cfd868e83e0 nmdc:wfrbt-11-6ddczg96.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-epwrz448 +INFO:root:omics_processing_id: nmdc:omprc-11-tzpe8m19 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:863cb2b6a32feaab3048145ccd9538a9 nmdc:dobj-11-6g406t87 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02a063abfa0c3dabe61cc6b09cb88bb2 nmdc:dobj-11-a6hn8n33 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-tzpe8m19 +INFO:root:New activity id created for nmdc:omprc-11-tzpe8m19 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3t7ym715.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzpe8m19/nmdc:wfrqc-11-3t7ym715.1 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computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzpe8m19/nmdc:wfmgas-11-272eat84.1/nmdc_wfmgas-11-272eat84.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60f234bcf3ef75a61cc6d9bf3580cae7 nmdc:dobj-11-8b6a9a86 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-tzpe8m19 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-272eat84.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b274b471b5d453aaa2e1fa394d66ee3b +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzpe8m19/nmdc:wfmgas-11-272eat84.1/nmdc_wfmgas-11-272eat84.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b274b471b5d453aaa2e1fa394d66ee3b nmdc:dobj-11-g5hg8572 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-tzpe8m19 +INFO:nmdc_automation.re_iding.base:new_filename: 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nmdc:5b228ec634fc514f762c2553699269cd nmdc:dobj-11-096gmy23 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-1r9f1542 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k7rmbq24.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d8292961125b5b80428544c9caeba571 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1r9f1542/nmdc:wfrqc-11-k7rmbq24.1/nmdc_wfrqc-11-k7rmbq24.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d8292961125b5b80428544c9caeba571 nmdc:dobj-11-qy9vb669 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-1r9f1542 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k7rmbq24.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:851867da284c689c38acd222fe1b035f nmdc:wfrqc-11-k7rmbq24.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-1r9f1542/nmdc:wfmgas-11-8dphab69.1/nmdc_wfmgas-11-8dphab69.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f23df86f93ccd4a0b1ba82f1553302be nmdc:dobj-11-emqte746 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-1r9f1542 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8dphab69.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3318e16f1c0fe19af1efa3b6ff052f9 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1r9f1542/nmdc:wfmgas-11-8dphab69.1/nmdc_wfmgas-11-8dphab69.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3318e16f1c0fe19af1efa3b6ff052f9 nmdc:dobj-11-mpxhh591 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-1r9f1542 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8dphab69.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b168b12efd9f6bc00d9bc68f6b34201 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1r9f1542/nmdc:wfmgas-11-8dphab69.1/nmdc_wfmgas-11-8dphab69.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b168b12efd9f6bc00d9bc68f6b34201 nmdc:dobj-11-yhsbv537 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-1r9f1542 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8dphab69.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb97ce6cd70c5a87ac90b9600b5d5f40 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1r9f1542/nmdc:wfmgas-11-8dphab69.1/nmdc_wfmgas-11-8dphab69.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb97ce6cd70c5a87ac90b9600b5d5f40 nmdc:dobj-11-ffeq6h07 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path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rjqhxm24/nmdc:wfrbt-11-hya6fk59.1/nmdc_wfrbt-11-hya6fk59.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4fd183dade7dbaae399428daffb39763 nmdc:dobj-11-sfgr1m96 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-rjqhxm24 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hya6fk59.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78a2fd68b9524f26c8b84562b873a271 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rjqhxm24/nmdc:wfrbt-11-hya6fk59.1/nmdc_wfrbt-11-hya6fk59.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78a2fd68b9524f26c8b84562b873a271 nmdc:dobj-11-20yx2b08 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-rjqhxm24 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hya6fk59.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92cce9576da32f2671732d6b2f21b7f7 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rjqhxm24/nmdc:wfrbt-11-hya6fk59.1/nmdc_wfrbt-11-hya6fk59.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92cce9576da32f2671732d6b2f21b7f7 nmdc:dobj-11-h0dh2d51 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-rjqhxm24 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hya6fk59.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:684ef10c2e74daeb02da6b4706aa7438 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rjqhxm24/nmdc:wfrbt-11-hya6fk59.1/nmdc_wfrbt-11-hya6fk59.1_centrifuge_classification.tsv 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nmdc:c34d79269433c487027fbe2c53cc05a9 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rjqhxm24/nmdc:wfrbt-11-hya6fk59.1/nmdc_wfrbt-11-hya6fk59.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c34d79269433c487027fbe2c53cc05a9 nmdc:dobj-11-p898gw81 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-rjqhxm24 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hya6fk59.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80c62ece72a1abad5f0accfbae97a10f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rjqhxm24/nmdc:wfrbt-11-hya6fk59.1/nmdc_wfrbt-11-hya6fk59.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80c62ece72a1abad5f0accfbae97a10f nmdc:dobj-11-jdk8w215 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-rjqhxm24 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hya6fk59.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1bad181cf58b3c8cc5701980db3dccb5 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rjqhxm24/nmdc:wfrbt-11-hya6fk59.1/nmdc_wfrbt-11-hya6fk59.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1bad181cf58b3c8cc5701980db3dccb5 nmdc:dobj-11-3d44f823 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-rjqhxm24 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hya6fk59.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0ba498c353d26f7688c3a281ad460b68 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rjqhxm24/nmdc:wfrbt-11-hya6fk59.1/nmdc_wfrbt-11-hya6fk59.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0ba498c353d26f7688c3a281ad460b68 nmdc:dobj-11-94vcrw19 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-rjqhxm24 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-hya6fk59.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d16144d105493e156a97132b64038655 nmdc:wfrbt-11-hya6fk59.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-rjqhxm24 +INFO:root:omics_processing_id: nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b859a0a1bc47e8791d46a2c1f880bdad nmdc:dobj-11-a5x5v463 +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf51206466348a697e9b7aeaa34745f4 nmdc:dobj-11-4fgfhd10 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zr6p9y23 +INFO:root:New activity id created for nmdc:omprc-11-zr6p9y23 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-j6dhb967.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrqc-11-j6dhb967.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46b70715c85ad936f0939ae31d6684be +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrqc-11-j6dhb967.1/nmdc_wfrqc-11-j6dhb967.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46b70715c85ad936f0939ae31d6684be nmdc:dobj-11-gh0k5210 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j6dhb967.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:30b57b37f1dee0d230bac1957275e7cf +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrqc-11-j6dhb967.1/nmdc_wfrqc-11-j6dhb967.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:30b57b37f1dee0d230bac1957275e7cf nmdc:dobj-11-nv3ybf50 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j6dhb967.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:855c29efad3c6dfeecbebb5a3828aa3f nmdc:wfrqc-11-j6dhb967.1 +INFO:root:New activity id created for nmdc:omprc-11-zr6p9y23 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-zgef3x81.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrqc-11-zgef3x81.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b57a7232abc790c81cfe9568c56a2af3 +INFO:root:New file path computed for Filtered Sequencing Reads: 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nmdc:omprc-11-zr6p9y23 +INFO:root:New activity id created for nmdc:omprc-11-zr6p9y23 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dwgz8663.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5d957ff1f4f5b653595e538ee75d9140 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1/nmdc_wfrbt-11-dwgz8663.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5d957ff1f4f5b653595e538ee75d9140 nmdc:dobj-11-fnhcnx76 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwgz8663.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a125789a7525f8f0b9b3e91b15bdbd78 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1/nmdc_wfrbt-11-dwgz8663.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a125789a7525f8f0b9b3e91b15bdbd78 nmdc:dobj-11-x1e64v58 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwgz8663.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4dfc712e2b75d15e5cb652fc2a5db67a +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1/nmdc_wfrbt-11-dwgz8663.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4dfc712e2b75d15e5cb652fc2a5db67a nmdc:dobj-11-apd5np94 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zr6p9y23 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1/nmdc_wfrbt-11-dwgz8663.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:196be2a65e4f93a80016c0ba1f33da29 nmdc:dobj-11-tvxycc39 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwgz8663.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bd20b9cd17c3fc22ec26058f8d664cd +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1/nmdc_wfrbt-11-dwgz8663.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bd20b9cd17c3fc22ec26058f8d664cd nmdc:dobj-11-mxbgz639 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwgz8663.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7494124724254afd8efac7c99e634149 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1/nmdc_wfrbt-11-dwgz8663.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7494124724254afd8efac7c99e634149 nmdc:dobj-11-vt1w1q92 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwgz8663.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8cfe9b371d4cd68655e1ffa6f203ce2 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1/nmdc_wfrbt-11-dwgz8663.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8cfe9b371d4cd68655e1ffa6f203ce2 nmdc:dobj-11-hjeb5e74 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwgz8663.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a23d15e3d9ee6c6476d4f499f516623a +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-dwgz8663.1/nmdc_wfrbt-11-dwgz8663.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a23d15e3d9ee6c6476d4f499f516623a nmdc:dobj-11-akw3re48 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dwgz8663.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:855c29efad3c6dfeecbebb5a3828aa3f nmdc:wfrbt-11-dwgz8663.1 +INFO:root:New activity id 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-nrj7s140.1/nmdc_wfrbt-11-nrj7s140.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47248c291f63f7cc7eda85f9290a2610 nmdc:dobj-11-gte2n761 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nrj7s140.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07d57d215bd0350dace8ade28ad1960e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-nrj7s140.1/nmdc_wfrbt-11-nrj7s140.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07d57d215bd0350dace8ade28ad1960e nmdc:dobj-11-me95a137 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nrj7s140.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a5037c4742997b89c46a90f728c9dbeb +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-nrj7s140.1/nmdc_wfrbt-11-nrj7s140.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5037c4742997b89c46a90f728c9dbeb nmdc:dobj-11-nptbvq87 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nrj7s140.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80eaf53642482c2f1247ee35f255f11d +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-nrj7s140.1/nmdc_wfrbt-11-nrj7s140.1_centrifuge_report.tsv 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file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-nrj7s140.1/nmdc_wfrbt-11-nrj7s140.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44ab319a9bd5e6f28c426d0a2b34c18f nmdc:dobj-11-h7mntj52 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zr6p9y23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-nrj7s140.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:def32bb9957912c76366916b444ea92d +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zr6p9y23/nmdc:wfrbt-11-nrj7s140.1/nmdc_wfrbt-11-nrj7s140.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:def32bb9957912c76366916b444ea92d nmdc:dobj-11-8vhs9f81 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee31a9282e5448f9498a5d3344b0c791 nmdc:dobj-11-1wcyx558 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-amsezt94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-weyg4a83.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9956242c40e6c6842c6e0a2e86687cdd +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-amsezt94/nmdc:wfrbt-11-weyg4a83.1/nmdc_wfrbt-11-weyg4a83.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9956242c40e6c6842c6e0a2e86687cdd nmdc:dobj-11-d7brjv88 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-amsezt94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-weyg4a83.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c48f5e6e9b182fca953cd76f8a2c405 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-amsezt94/nmdc:wfrbt-11-weyg4a83.1/nmdc_wfrbt-11-weyg4a83.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c48f5e6e9b182fca953cd76f8a2c405 nmdc:dobj-11-zmpfre22 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-amsezt94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-weyg4a83.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fea336f0c85e7f453ca97c1268ef340d +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-amsezt94/nmdc:wfrbt-11-weyg4a83.1/nmdc_wfrbt-11-weyg4a83.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fea336f0c85e7f453ca97c1268ef340d nmdc:dobj-11-4eygm179 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-amsezt94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-weyg4a83.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:3509b24340cc6523c6f202ad54e3d8c8 nmdc:wfrbt-11-weyg4a83.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-amsezt94 +INFO:root:Writing 79 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-547rwq94_re_ided_record_dump.json +INFO:root:Elapsed time: 1701.778904914856 diff --git a/nmdc_automation/re_iding/scripts/nmdc:sty-11-dcqce727_extract_records.log b/nmdc_automation/re_iding/scripts/nmdc:sty-11-dcqce727_extract_records.log new file mode 100644 index 00000000..73d6ce00 --- /dev/null +++ b/nmdc_automation/re_iding/scripts/nmdc:sty-11-dcqce727_extract_records.log @@ -0,0 +1,6337 @@ +/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/urllib3/__init__.py:34: NotOpenSSLWarning: urllib3 v2 only supports OpenSSL 1.1.1+, currently the 'ssl' module is compiled with 'LibreSSL 2.8.3'. See: https://github.com/urllib3/urllib3/issues/3020 + warnings.warn( +INFO:root:Extracting workflow records for study_id: nmdc:sty-11-dcqce727 +INFO:root:study_id: nmdc:sty-11-dcqce727 +INFO:root:Retrieved 737 OmicsProcessing records for study nmdc:sty-11-dcqce727 +INFO:root:omics_processing_record: nmdc:omprc-11-2b4p5w74 +INFO:root:legacy_id: gold:Gp0321263 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-2b4p5w74 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b869964d0b3516a5f4f4c +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321263 +INFO:root:found 1 records +INFO:root:record: nmdc:34dbd761ee939aa0babda34c056cbd4b, Read QC Activity for nmdc:mga0t30k86 +INFO:root:PassingDataObject: nmdc:c0e9d3889c9fdbb46f0e281deec24b8e +INFO:root:PassingDataObject: nmdc:3c8c16878df4682bb74802288ca0353f +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321263 +INFO:root:found 1 records +INFO:root:record: nmdc:34dbd761ee939aa0babda34c056cbd4b, ReadBased Analysis Activity for nmdc:mga0t30k86 +INFO:root:PassingDataObject: nmdc:4f31d14ada72534e0bc0e1eee5c70b3c +INFO:root:PassingDataObject: nmdc:3d8d194540a9abfac94681786bc7b5f3 +INFO:root:PassingDataObject: nmdc:1895b3f4b933d6079e699106f340a212 +INFO:root:PassingDataObject: nmdc:fcb9df5e57c95ba28c9a5b23f771253b +INFO:root:PassingDataObject: nmdc:5e2d153e2e66724705658507aa773fc4 +INFO:root:PassingDataObject: nmdc:8bd8e7f3afac1a3f7582a7603f26e13a +INFO:root:PassingDataObject: nmdc:dcfb58cadf0182e243bc47f82639f3e5 +INFO:root:PassingDataObject: nmdc:37e1d9a7b5f2500952a25613b2f2d327 +INFO:root:PassingDataObject: nmdc:921626b3e129cef6f68145bbccd85a36 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321263 +INFO:root:found 1 records +INFO:root:record: nmdc:34dbd761ee939aa0babda34c056cbd4b, Assembly Activity for nmdc:mga0t30k86 +INFO:root:PassingDataObject: nmdc:8f703cd22df1fffbd8f510b466566e39 +INFO:root:PassingDataObject: nmdc:c0d59ccab41cd3e301b1faece017d8ca +INFO:root:PassingDataObject: nmdc:8e890d681fa5d2f864b2df8a0e0ddaef +INFO:root:PassingDataObject: nmdc:375620f19a28aac1e603758c6062337f +INFO:root:PassingDataObject: nmdc:358fd0533f80b4aec30e25c4e72c9aa0 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321263 +INFO:root:found 1 records +INFO:root:record: nmdc:34dbd761ee939aa0babda34c056cbd4b, Annotation Activity for nmdc:mga0t30k86 +INFO:root:PassingDataObject: nmdc:753e6cc163f9242f1bbb0574fcd327be +INFO:root:PassingDataObject: nmdc:40d4ae87742bd4dc782e3dff340a920e +INFO:root:PassingDataObject: nmdc:d35f346846ecafdbb2ed53cea320011f +INFO:root:PassingDataObject: nmdc:f52b2f507cca1ed5f17ef0fd49d1a8ac +INFO:root:PassingDataObject: nmdc:4906ae7ade3808c486bedb476d44e592 +INFO:root:PassingDataObject: nmdc:8c67f142a399e597cf01ee66eb0ec983 +INFO:root:PassingDataObject: nmdc:0896e568bcac25934caa5ee687bc5179 +INFO:root:PassingDataObject: nmdc:4d7734c974d41799d3d0e9dcb9df700e +INFO:root:PassingDataObject: nmdc:0626452d92d014a8956261ede30ae598 +INFO:root:PassingDataObject: nmdc:ef2c1de0c50d356b63dfc41867a5b6e5 +INFO:root:PassingDataObject: nmdc:4214371fd769e8bc7c2a672fb73fa818 +INFO:root:PassingDataObject: nmdc:a292c87254962946ce7e5b667a67e427 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321263 +INFO:root:found 1 records +INFO:root:record: nmdc:34dbd761ee939aa0babda34c056cbd4b, MAGs Analysis Activity for nmdc:mga0t30k86 +INFO:root:PassingDataObject: nmdc:f8f77ffd24e01ee042132023d7c4149a +INFO:root:PassingDataObject: nmdc:212caffa73a5b1663ac75f235d1dcfb4 +INFO:root:PassingDataObject: nmdc:1ee0c561ab644999620dd7f7b9033bd1 +INFO:root:PassingDataObject: nmdc:e3486e2c9772c766ff6e76c08cae4fc8 +INFO:root:PassingDataObject: nmdc:a1c78adb4692bf0e59a7211fdd2771d0 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:34dbd761ee939aa0babda34c056cbd4b +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:34dbd761ee939aa0babda34c056cbd4b, MAGs Analysis Activity for nmdc:mga0t30k86 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321263 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-c8aj0c39 +INFO:root:legacy_id: gold:Gp0321267 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-c8aj0c39 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86b364d0b3516a5f4f53 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321267 +INFO:root:found 1 records +INFO:root:record: nmdc:9daae34cdca40402b0a61bc4c3158982, Read QC Activity for nmdc:mga0m2km37 +INFO:root:PassingDataObject: nmdc:1ef957abf7e6d5984d206eb20d082373 +INFO:root:PassingDataObject: nmdc:9afe88946f7a98b3208dc999018bd76b +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321267 +INFO:root:found 1 records +INFO:root:record: nmdc:9daae34cdca40402b0a61bc4c3158982, ReadBased Analysis Activity for nmdc:mga0m2km37 +INFO:root:PassingDataObject: nmdc:baca8518ea27b9812881fe815c4dd364 +INFO:root:PassingDataObject: nmdc:0a77d009e0b84d083b72d13c36d1e7cb +INFO:root:PassingDataObject: nmdc:fb27f0e7a7c1382eb2c4e2eef2fa90b5 +INFO:root:PassingDataObject: nmdc:d3a61804bb8c1345ec9fc3b352062250 +INFO:root:PassingDataObject: nmdc:72b7e2767f340df0210c3e5e3d54f8dc +INFO:root:PassingDataObject: nmdc:6e890ce94266c75e90921a2bec524f79 +INFO:root:PassingDataObject: nmdc:bfd423008de148f1009064bd7b2a9353 +INFO:root:PassingDataObject: nmdc:5879b038324c008d8fe29e971c2f326c +INFO:root:PassingDataObject: nmdc:6fb51d6ca012a5b0889a844b61cd7d05 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321267 +INFO:root:found 1 records +INFO:root:record: nmdc:9daae34cdca40402b0a61bc4c3158982, Assembly Activity for nmdc:mga0m2km37 +INFO:root:PassingDataObject: nmdc:77d207905487d03440ffae08bbba118b +INFO:root:PassingDataObject: nmdc:ba1d5e4bcf54cd3d4767e504fb88a09c +INFO:root:PassingDataObject: nmdc:04a984792fc11e2720a9d8d7f9f73cb5 +INFO:root:PassingDataObject: nmdc:ccc1937d80f59270ada562be6451a86b +INFO:root:PassingDataObject: nmdc:c4f7178541f53d936ef72f7511c3314f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321267 +INFO:root:found 1 records +INFO:root:record: nmdc:9daae34cdca40402b0a61bc4c3158982, Annotation Activity for nmdc:mga0m2km37 +INFO:root:PassingDataObject: nmdc:424525351573eb4da5fa6db102e5ac0c +INFO:root:PassingDataObject: nmdc:a4bd609c18022fa42048334d36743cd4 +INFO:root:PassingDataObject: nmdc:6f89a830efc93c15516e151b0af83012 +INFO:root:PassingDataObject: nmdc:fdf5a47be0d0c05c4c9a24ec51950d38 +INFO:root:PassingDataObject: nmdc:3948f8b66f1ddb7a2977f5f289b3d242 +INFO:root:PassingDataObject: nmdc:61386cf451267c1775246679960dedc6 +INFO:root:PassingDataObject: nmdc:61635ae336ec03f596a2914226e35933 +INFO:root:PassingDataObject: nmdc:7b7820a6ad4b28f71c24ff0d43bf2590 +INFO:root:PassingDataObject: nmdc:c1343182afd31b43c5068d6323b13d9a +INFO:root:PassingDataObject: nmdc:cc51c5145e0f2a2e836b581045414b5e +INFO:root:PassingDataObject: nmdc:c3efee577ae2bdc5ee23276cbe873001 +INFO:root:PassingDataObject: nmdc:b067e5d5e20fc5833b8289cad7b79c07 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321267 +INFO:root:found 1 records +INFO:root:record: nmdc:9daae34cdca40402b0a61bc4c3158982, MAGs Analysis Activity for nmdc:mga0m2km37 +INFO:root:PassingDataObject: nmdc:91722ceaf76d518dd4dd080fbb069eb4 +INFO:root:PassingDataObject: nmdc:a47011256b626c6b9b06e99ce6e2c0e1 +INFO:root:PassingDataObject: nmdc:956c5648ab7f52d6a7a399a95bc03e7b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:9daae34cdca40402b0a61bc4c3158982 +ERROR:root:FailedDataObject: nmdc:7ea73b6088594317588fc409e34ed2e3, +ERROR:root:FailedDataObject: nmdc:4d37ea962d5efae513eda5df68dc4874, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:9daae34cdca40402b0a61bc4c3158982, MAGs Analysis Activity for nmdc:mga0m2km37 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321267 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-73zj8f68 +INFO:root:legacy_id: gold:Gp0321269 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-73zj8f68 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86c064d0b3516a5f4f57 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321269 +INFO:root:found 1 records +INFO:root:record: nmdc:aed6288d24e0efe01fe77e883beefcdd, Read QC Activity for nmdc:mga0483864 +INFO:root:PassingDataObject: nmdc:9911ea72aca9fcffee651edf7e34d322 +INFO:root:PassingDataObject: nmdc:543423363b364683505767feae904b74 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321269 +INFO:root:found 1 records +INFO:root:record: nmdc:aed6288d24e0efe01fe77e883beefcdd, ReadBased Analysis Activity for nmdc:mga0483864 +INFO:root:PassingDataObject: nmdc:53c7aca3eec5fe4b8b336e06c978d583 +INFO:root:PassingDataObject: nmdc:328b29f16f4206fc0b68e60f8c767e69 +INFO:root:PassingDataObject: nmdc:2c8ddc2b1a70fd7c57e44a7c6db15ac1 +INFO:root:PassingDataObject: nmdc:c2b27e081f897da87cb426c366a9189e +INFO:root:PassingDataObject: nmdc:0a6731b1dcce68c11babe70c269a54ca +INFO:root:PassingDataObject: nmdc:e130c6bb31789051ea7fb718fece4810 +INFO:root:PassingDataObject: nmdc:f2389fb98701dbd1e02406b56a11ef96 +INFO:root:PassingDataObject: nmdc:e7a0f2bf148f52a80f0bf8e1304f1ce9 +INFO:root:PassingDataObject: nmdc:091210a53aee442afa483bacd74bf693 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321269 +INFO:root:found 1 records +INFO:root:record: nmdc:aed6288d24e0efe01fe77e883beefcdd, Assembly Activity for nmdc:mga0483864 +INFO:root:PassingDataObject: nmdc:5d6e463e78e2be3c0ca11efbf52a0444 +INFO:root:PassingDataObject: nmdc:eaec89a4452c1d3142d064e8fd699e8a +INFO:root:PassingDataObject: nmdc:a31e19f57fbff29473ca4a7f6a498ff3 +INFO:root:PassingDataObject: nmdc:3f9c1e5066e5ac41e2c56ab2424380b2 +INFO:root:PassingDataObject: nmdc:25e6c19dc8eb68836a951a2da7014a8b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321269 +INFO:root:found 1 records +INFO:root:record: nmdc:aed6288d24e0efe01fe77e883beefcdd, Annotation Activity for nmdc:mga0483864 +INFO:root:PassingDataObject: nmdc:f9ff2361c0da6424778301cb517bd197 +INFO:root:PassingDataObject: nmdc:ffc118158539fe1e38b7116930403dcc +INFO:root:PassingDataObject: nmdc:a251e8139cec2e062b080d8feba4eb17 +INFO:root:PassingDataObject: nmdc:8d7345b8a541635f69bf9b77ed94e0d9 +INFO:root:PassingDataObject: nmdc:539a9cdfb7cd854f21346d604c1f5435 +INFO:root:PassingDataObject: nmdc:074406416164901b180d984b43c59354 +INFO:root:PassingDataObject: nmdc:1687c5a2e762dcf1d243f3966ef86270 +INFO:root:PassingDataObject: nmdc:9dd884f799040d35ac2edafe8ba43540 +INFO:root:PassingDataObject: nmdc:6e312ed0bade489d20ecc7d93f74409f +INFO:root:PassingDataObject: nmdc:fe8d1f4b490e80f9a584e52f2b016fc8 +INFO:root:PassingDataObject: nmdc:a70ae9ebe3141ccbf6471d6e501b9ef3 +INFO:root:PassingDataObject: nmdc:8f478b387c2d0bf5eb3a89aac319d387 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321269 +INFO:root:found 1 records +INFO:root:record: nmdc:aed6288d24e0efe01fe77e883beefcdd, MAGs Analysis Activity for nmdc:mga0483864 +INFO:root:PassingDataObject: nmdc:977a723a19f847e88e446a3cb049b664 +INFO:root:PassingDataObject: nmdc:694e44885683fa95c0997e10139cafa8 +INFO:root:PassingDataObject: nmdc:81ff85cfda4b027f4f8772eb713979da +INFO:root:PassingDataObject: nmdc:1a992fa35a7236c801d886c91466ccc3 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:aed6288d24e0efe01fe77e883beefcdd +ERROR:root:FailedDataObject: nmdc:41c2e3ed9a874583cbca4cb6def90a63, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:aed6288d24e0efe01fe77e883beefcdd, MAGs Analysis Activity for nmdc:mga0483864 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321269 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-d09vf280 +INFO:root:legacy_id: gold:Gp0321266 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-d09vf280 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86ad64d0b3516a5f4f52 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321266 +INFO:root:found 1 records +INFO:root:record: nmdc:5ddc7a733aaa7e5a03d70ba2b3368345, Read QC Activity for nmdc:mga020qn69 +INFO:root:PassingDataObject: nmdc:a72992147fab2ab7581f6c8e38191e21 +INFO:root:PassingDataObject: nmdc:ef5667c6f2fd489fa4bd80eae4164153 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321266 +INFO:root:found 1 records +INFO:root:record: nmdc:5ddc7a733aaa7e5a03d70ba2b3368345, ReadBased Analysis Activity for nmdc:mga020qn69 +INFO:root:PassingDataObject: nmdc:22fc353001e8416959972ba0955dd937 +INFO:root:PassingDataObject: nmdc:d42a298582fce33437ede0933249a584 +INFO:root:PassingDataObject: nmdc:9606f82d551ac68c3c3c856f0e743551 +INFO:root:PassingDataObject: nmdc:fc7e1a180571c1686297f4ab302e7358 +INFO:root:PassingDataObject: nmdc:47469435f57faba231148bc7fc13f95c +INFO:root:PassingDataObject: nmdc:6d25b59e0eb409d1c41f5fee3026d51a +INFO:root:PassingDataObject: nmdc:4b2e6874e87e29cb06208820e088907c +INFO:root:PassingDataObject: nmdc:eb1c9efdbc933d7cf8191d0b25e78e90 +INFO:root:PassingDataObject: nmdc:c3d217e5caf1b9a4a536e00d780cd44d +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321266 +INFO:root:found 1 records +INFO:root:record: nmdc:5ddc7a733aaa7e5a03d70ba2b3368345, Assembly Activity for nmdc:mga020qn69 +INFO:root:PassingDataObject: nmdc:4eb84f1c9818ff73c74af5729c428682 +INFO:root:PassingDataObject: nmdc:bbb99df5de5d6ebdc071fcd3f8a0585e +INFO:root:PassingDataObject: nmdc:813d7b2eb9c30a8d6d79822e3078923b +INFO:root:PassingDataObject: nmdc:5eca345d18398c4e2e7f424c0e1ff1ff +INFO:root:PassingDataObject: nmdc:c1f87cf8a6e87dc933bdd6822f52b43a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321266 +INFO:root:found 1 records +INFO:root:record: nmdc:5ddc7a733aaa7e5a03d70ba2b3368345, Annotation Activity for nmdc:mga020qn69 +INFO:root:PassingDataObject: nmdc:d9cebb1da94169b69f52c52f83087ee0 +INFO:root:PassingDataObject: nmdc:1a80bbcf479a2dc99fe20992ce8254a5 +INFO:root:PassingDataObject: nmdc:beb2304226294e11ba001856118b1c08 +INFO:root:PassingDataObject: nmdc:9c95e8db1476cd603c775f17f22e936c +INFO:root:PassingDataObject: nmdc:16e8f16aebf37e4eae8df4515fbbe08f +INFO:root:PassingDataObject: nmdc:78ca56b464cffddff50bc71967985b01 +INFO:root:PassingDataObject: nmdc:7f3ec671857fdf3785a795804848d572 +INFO:root:PassingDataObject: nmdc:27c92283a23a51a779d9a536b52154b0 +INFO:root:PassingDataObject: nmdc:e8195c24a9ac036dbed4d7649bd98e70 +INFO:root:PassingDataObject: nmdc:1fabfa23d35f188714e9d7f589ecd0fb +INFO:root:PassingDataObject: nmdc:12da08589f8c9e5f19d1813ec70fbee8 +INFO:root:PassingDataObject: nmdc:a80e4ab0a47325e21955c5d7dcbfb8f1 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321266 +INFO:root:found 1 records +INFO:root:record: nmdc:5ddc7a733aaa7e5a03d70ba2b3368345, MAGs Analysis Activity for nmdc:mga020qn69 +INFO:root:PassingDataObject: nmdc:d0f4484800deb7b5664f7283fb5c7041 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5ddc7a733aaa7e5a03d70ba2b3368345 +ERROR:root:FailedDataObject: nmdc:ea7ef1b26cdf56a0556a38d6c8e4115d, +ERROR:root:FailedDataObject: nmdc:1944e9bc23eeace030949363c2e3e9ad, +ERROR:root:FailedDataObject: nmdc:200cdac52f098e36c36c5ebd91ab5ccb, +ERROR:root:FailedDataObject: nmdc:062865a0bf08f7900b962b2e92c78d04, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5ddc7a733aaa7e5a03d70ba2b3368345, MAGs Analysis Activity for nmdc:mga020qn69 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321266 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-1wva5e80 +INFO:root:legacy_id: gold:Gp0321264 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-1wva5e80 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86a064d0b3516a5f4f4e +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321264 +INFO:root:found 1 records +INFO:root:record: nmdc:42bde508cfceec40d3320554543edce6, Read QC Activity for nmdc:mga0wn3d15 +INFO:root:PassingDataObject: nmdc:13ba8c328d405dcd6e7606d0bf5c5f5c +INFO:root:PassingDataObject: nmdc:c42175a3db24c5a38025acb50689c9d4 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321264 +INFO:root:found 1 records +INFO:root:record: nmdc:42bde508cfceec40d3320554543edce6, ReadBased Analysis Activity for nmdc:mga0wn3d15 +INFO:root:PassingDataObject: nmdc:4a88c36d8505f63aebac422b95157bc2 +INFO:root:PassingDataObject: nmdc:50de8e1f2c7c27c1ec52f5ecf5b59a58 +INFO:root:PassingDataObject: nmdc:8dce35efdc8ab7ae4be935ee3ad6c6ef +INFO:root:PassingDataObject: nmdc:728e41bbb05b496d46a69648a9817157 +INFO:root:PassingDataObject: nmdc:43594a3666ac0bf08826db2c9191f35f +INFO:root:PassingDataObject: nmdc:7cc91a8c1179b0ccbffbd8c3752ba289 +INFO:root:PassingDataObject: nmdc:17c14adeb5744536ab40ca7073573fcc +INFO:root:PassingDataObject: nmdc:cb333e04e270bdbf67df14c020f3e182 +INFO:root:PassingDataObject: nmdc:1cd859b8d8ec1d08536aeb3acc6a2b46 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321264 +INFO:root:found 1 records +INFO:root:record: nmdc:42bde508cfceec40d3320554543edce6, Assembly Activity for nmdc:mga0wn3d15 +INFO:root:PassingDataObject: nmdc:7160e3471a2270f14ccc067c6318b4c0 +INFO:root:PassingDataObject: nmdc:67b631ae48f1352d37a0604029bd3efe +INFO:root:PassingDataObject: nmdc:4c607ed9df3d474c03bd98f1f435c34c +INFO:root:PassingDataObject: nmdc:dd3e339f8cb3ed17f0a98992f51df447 +INFO:root:PassingDataObject: nmdc:3fc70cf9ceecefc8680577020c3dbbd9 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321264 +INFO:root:found 1 records +INFO:root:record: nmdc:42bde508cfceec40d3320554543edce6, Annotation Activity for nmdc:mga0wn3d15 +INFO:root:PassingDataObject: nmdc:e46c774e8501d0e936f5d5b3a5f13f13 +INFO:root:PassingDataObject: nmdc:ab6a2e835cfceb11f89d769897e3bcdf +INFO:root:PassingDataObject: nmdc:59eadcf92864e105b0672de17954fee9 +INFO:root:PassingDataObject: nmdc:b0f42daecb0ef1cfc491da4547d3f343 +INFO:root:PassingDataObject: nmdc:0850e3f6b24fbe7fcf8af2d5884d7c86 +INFO:root:PassingDataObject: nmdc:e1283022c7535c7755f46d56c6a20989 +INFO:root:PassingDataObject: nmdc:10a874c0b91227a238b5736745710e4d +INFO:root:PassingDataObject: nmdc:048fb79ca91376efc2b9d6388610192e +INFO:root:PassingDataObject: nmdc:9768687d0c04bfbe1eaa8c4f8b8caa30 +INFO:root:PassingDataObject: nmdc:8276a0a0f7e550ff7021e3f831a0a859 +INFO:root:PassingDataObject: nmdc:b0ac0f3bb1fec106021cd1e6a9b6fb02 +INFO:root:PassingDataObject: nmdc:b597dd51047ea1845c235820f169fed2 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321264 +INFO:root:found 1 records +INFO:root:record: nmdc:42bde508cfceec40d3320554543edce6, MAGs Analysis Activity for nmdc:mga0wn3d15 +INFO:root:PassingDataObject: nmdc:910b13998102d5af2faad5b7e58317aa +INFO:root:PassingDataObject: nmdc:497c358939fa3ee5ad72037a92fdcb61 +INFO:root:PassingDataObject: nmdc:5faee0e9566383aa6329460ea1cc78db +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:42bde508cfceec40d3320554543edce6 +ERROR:root:FailedDataObject: nmdc:535633a3b3cb9ad0f78d10989b03ec6b, +ERROR:root:FailedDataObject: nmdc:a06e875e98faea86ceb610545ed29771, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:42bde508cfceec40d3320554543edce6, MAGs Analysis Activity for nmdc:mga0wn3d15 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321264 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-8gwr1y12 +INFO:root:legacy_id: gold:Gp0321276 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-8gwr1y12 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86f164d0b3516a5f4f66 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321276 +INFO:root:found 1 records +INFO:root:record: nmdc:4bcfd096cb916513d2d4ace59d03e049, Read QC Activity for nmdc:mga0qj3a46 +INFO:root:PassingDataObject: nmdc:edeaf6791ecfdac886292c5ccb20fd1a +INFO:root:PassingDataObject: nmdc:9b064384a2445dd070ddb0081fd17e3c +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321276 +INFO:root:found 1 records +INFO:root:record: nmdc:4bcfd096cb916513d2d4ace59d03e049, ReadBased Analysis Activity for nmdc:mga0qj3a46 +INFO:root:PassingDataObject: nmdc:f4e88e3ff3289eae2c4583820dbca047 +INFO:root:PassingDataObject: nmdc:22a44731006904ef2477c5c7fda3d9bb +INFO:root:PassingDataObject: nmdc:2799ee21fc5aec7422fe5c04644d61d7 +INFO:root:PassingDataObject: nmdc:58a3bb28ee9977308c0950ffe57296b2 +INFO:root:PassingDataObject: nmdc:f41882068c73b4bf07da61e5ebbbb9a7 +INFO:root:PassingDataObject: nmdc:5493c867250faf5c72466811850e2b53 +INFO:root:PassingDataObject: nmdc:cc3a841614ff6dace0b7d891d1a07812 +INFO:root:PassingDataObject: nmdc:04776441adb7c03f15b12aea328e8604 +INFO:root:PassingDataObject: nmdc:c5605ee5127183e2ddfca7fa6e1e6648 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321276 +INFO:root:found 1 records +INFO:root:record: nmdc:4bcfd096cb916513d2d4ace59d03e049, Assembly Activity for nmdc:mga0qj3a46 +INFO:root:PassingDataObject: nmdc:a6d38ec6f8731c9b9064652e13369ae5 +INFO:root:PassingDataObject: nmdc:21752d36424fe652fb8762857253e0fb +INFO:root:PassingDataObject: nmdc:52fa91d55e00bc7c0e934a34becce79b +INFO:root:PassingDataObject: nmdc:4c8d3f1814db0a0d8d826a5a8038811a +INFO:root:PassingDataObject: nmdc:0c34c11869e0c8c905481f409c668ffc +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321276 +INFO:root:found 1 records +INFO:root:record: nmdc:4bcfd096cb916513d2d4ace59d03e049, Annotation Activity for nmdc:mga0qj3a46 +INFO:root:PassingDataObject: nmdc:143467fe3af278f930eb4ef7d7c049e2 +INFO:root:PassingDataObject: nmdc:17f3d99cf4345b7d62275568b0269830 +INFO:root:PassingDataObject: nmdc:8be9be9d60a74a21ea1e747fb9a6142a +INFO:root:PassingDataObject: nmdc:e7971f30525b9db72c26f6323aab0be7 +INFO:root:PassingDataObject: nmdc:9e44c2eed980761109dbabce0ba31b7a +INFO:root:PassingDataObject: nmdc:c9bc5856e5acaf653f838b57ddfd97d9 +INFO:root:PassingDataObject: nmdc:aa016a60a458b3d9adcd53143353aa94 +INFO:root:PassingDataObject: nmdc:db717b9c841aaca18e35e1772b8a13d1 +INFO:root:PassingDataObject: nmdc:dbae74dc98d34d5490358a63cb67f407 +INFO:root:PassingDataObject: nmdc:3179917a7f9115162dad04e06cddb948 +INFO:root:PassingDataObject: nmdc:7c1e2d8e7d50ce6226a2432df7a06671 +INFO:root:PassingDataObject: nmdc:c54baebf7185e83215b53faf8ccb605f +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321276 +INFO:root:found 1 records +INFO:root:record: nmdc:4bcfd096cb916513d2d4ace59d03e049, MAGs Analysis Activity for nmdc:mga0qj3a46 +INFO:root:PassingDataObject: nmdc:1b443655baa026eefd4e338b0c2a07a2 +INFO:root:PassingDataObject: nmdc:6be537ad1a49f68ac260f9b9bc780e86 +INFO:root:PassingDataObject: nmdc:001ddebab5afd882816906553c7b97c6 +INFO:root:PassingDataObject: nmdc:0c418399fe6c920aa1634120e7b13952 +INFO:root:PassingDataObject: nmdc:9f9bed29212b84f765ae486b00467de3 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:4bcfd096cb916513d2d4ace59d03e049 +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4bcfd096cb916513d2d4ace59d03e049, MAGs Analysis Activity for nmdc:mga0qj3a46 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321276 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-zf0v3n42 +INFO:root:legacy_id: gold:Gp0321279 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zf0v3n42 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b870164d0b3516a5f4f6b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321279 +INFO:root:found 1 records +INFO:root:record: nmdc:bd873c28ea7329369b5bc77bd4b89884, Read QC Activity for nmdc:mga0dnw142 +INFO:root:PassingDataObject: nmdc:1a41cb69314f0d9e7cc4fe07ec87329d +INFO:root:PassingDataObject: nmdc:4b2f584fdc3e07e7a1c1f3007250f57a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321279 +INFO:root:found 1 records +INFO:root:record: nmdc:bd873c28ea7329369b5bc77bd4b89884, ReadBased Analysis Activity for nmdc:mga0dnw142 +INFO:root:PassingDataObject: nmdc:7642e5c8b9ff67abcd9ff50174c0af61 +INFO:root:PassingDataObject: nmdc:9f5a4a694f7b83f97797273da5f48b60 +INFO:root:PassingDataObject: nmdc:f33cced1d08af9dfcf6ceff857258a1f +INFO:root:PassingDataObject: nmdc:034b19f185aa5e3aa6ee31667dd3a186 +INFO:root:PassingDataObject: nmdc:85bc08d165a0504412658bfb905d0065 +INFO:root:PassingDataObject: nmdc:e34f386ac25ade0fb118d1e36f84a1be +INFO:root:PassingDataObject: nmdc:5e1803b787451fe95dae66562d4aedd2 +INFO:root:PassingDataObject: nmdc:a823a72e12e428cfaf512c4fe3149025 +INFO:root:PassingDataObject: nmdc:010c170740ee67fdeffa43969abc82e6 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321279 +INFO:root:found 1 records +INFO:root:record: nmdc:bd873c28ea7329369b5bc77bd4b89884, Assembly Activity for nmdc:mga0dnw142 +INFO:root:PassingDataObject: nmdc:6e83bfb829646994cb4fe830bca8117b +INFO:root:PassingDataObject: nmdc:6fc69ff183791a93cbfbb1b1952e2c00 +INFO:root:PassingDataObject: nmdc:6ac9fa6cb8c3f8074a157321c6e50c8a +INFO:root:PassingDataObject: nmdc:9f94ea7496992dd2aa298b106020b745 +INFO:root:PassingDataObject: nmdc:9fc434b56fa935a9246d64ae191aa559 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321279 +INFO:root:found 1 records +INFO:root:record: nmdc:bd873c28ea7329369b5bc77bd4b89884, Annotation Activity for nmdc:mga0dnw142 +INFO:root:PassingDataObject: nmdc:8877946bfdd1f7bcba3aa0c6960ed5d3 +INFO:root:PassingDataObject: nmdc:5cf485046113197e5644641c2ae03af8 +INFO:root:PassingDataObject: nmdc:97b071a6f77cf7900b332f3f0e46c908 +INFO:root:PassingDataObject: nmdc:9678b7c28b8ea3b46d51447812322a87 +INFO:root:PassingDataObject: nmdc:28509c217dbef8daa157ed898244db16 +INFO:root:PassingDataObject: nmdc:790cd92dff8e136b428649494101350a +INFO:root:PassingDataObject: nmdc:d52bdab00f19f7b19a29b6ec1a948ce7 +INFO:root:PassingDataObject: nmdc:69eace6c955ca17423bda02834bb4b9b +INFO:root:PassingDataObject: nmdc:770c734aa69f8a4d988a32f0a205b47f +INFO:root:PassingDataObject: nmdc:f229b09dc0c88df3fc9266ad9a37e49f +INFO:root:PassingDataObject: nmdc:ccd2eb69726c6b06ebdc039365319c0c +INFO:root:PassingDataObject: nmdc:952cb4b4ebbf4d1c240d3398300c5d21 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321279 +INFO:root:found 1 records +INFO:root:record: nmdc:bd873c28ea7329369b5bc77bd4b89884, MAGs Analysis Activity for nmdc:mga0dnw142 +INFO:root:PassingDataObject: nmdc:315da343245f253a3fbf4e6d9fcf921f +INFO:root:PassingDataObject: nmdc:b281df1c4b35758d0763c83986fffef9 +INFO:root:PassingDataObject: nmdc:51428bb540b95cc5798736db1167065e +INFO:root:PassingDataObject: nmdc:9362777698c44a321e65ab9279f47cc7 +INFO:root:PassingDataObject: nmdc:cf2c7414dc5890e8c87032c46ea72442 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:bd873c28ea7329369b5bc77bd4b89884 +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bd873c28ea7329369b5bc77bd4b89884, MAGs Analysis Activity for nmdc:mga0dnw142 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321279 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-8n61h723 +INFO:root:legacy_id: gold:Gp0321268 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-8n61h723 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86bb64d0b3516a5f4f56 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321268 +INFO:root:found 1 records +INFO:root:record: nmdc:a9b856016e98a9adf43cd8947b78c430, Read QC Activity for nmdc:mga0194153 +INFO:root:PassingDataObject: nmdc:18eeefd0c066fef1581944c0a1ab660b +INFO:root:PassingDataObject: nmdc:8887676e1c9622171f0f96702b9d9006 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321268 +INFO:root:found 1 records +INFO:root:record: nmdc:a9b856016e98a9adf43cd8947b78c430, ReadBased Analysis Activity for nmdc:mga0194153 +INFO:root:PassingDataObject: nmdc:ebaca54025c3b9e0d21bb751883e8280 +INFO:root:PassingDataObject: nmdc:b2498351dda7711385f27f36dc7b5b58 +INFO:root:PassingDataObject: nmdc:66336811a748796f07d4b704eb06c186 +INFO:root:PassingDataObject: nmdc:0b880ab7c7d16b5671d6ee8c9ba1710f +INFO:root:PassingDataObject: nmdc:6d4f90b0c39c1f00152e1975f6241ad0 +INFO:root:PassingDataObject: nmdc:9cc2420bdaacbdf3faf867f8a19ff36b +INFO:root:PassingDataObject: nmdc:e6fb55f9ae7ce82335c6b6a017ba6881 +INFO:root:PassingDataObject: nmdc:df21a8659e9a8d927658dddcd4990a4d +INFO:root:PassingDataObject: nmdc:dfe841e8a330e7e44cbdfb72e0e9b758 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321268 +INFO:root:found 1 records +INFO:root:record: nmdc:a9b856016e98a9adf43cd8947b78c430, Assembly Activity for nmdc:mga0194153 +INFO:root:PassingDataObject: nmdc:a392f7b38a25c3f0d292cc1296954779 +INFO:root:PassingDataObject: nmdc:9f819691d8cc271c9a20a764982176a8 +INFO:root:PassingDataObject: nmdc:8aae650d164fb5d7d4f563589016bd6d +INFO:root:PassingDataObject: nmdc:a0600b646a25c1e4dbed0664ddcc877e +INFO:root:PassingDataObject: nmdc:018cadc70b5ad51e086218dc464fe0a5 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321268 +INFO:root:found 1 records +INFO:root:record: nmdc:a9b856016e98a9adf43cd8947b78c430, Annotation Activity for nmdc:mga0194153 +INFO:root:PassingDataObject: nmdc:39299be38a6f488173e5293f277bfb9c +INFO:root:PassingDataObject: nmdc:97d9cb8fefbe7893b3db6a311d623a1c +INFO:root:PassingDataObject: nmdc:89752de42591993080ede934eef5a1dc +INFO:root:PassingDataObject: nmdc:d65d3a16c1096033b8a3b5c4684ca9d1 +INFO:root:PassingDataObject: nmdc:625122eb45f660226eb97161c0bdaef7 +INFO:root:PassingDataObject: nmdc:b51ccd07290a717e80a3410671cbef15 +INFO:root:PassingDataObject: nmdc:5504754b7aaf217cf12028ec80b3c5a7 +INFO:root:PassingDataObject: nmdc:94d731345225ad04555cd133ee3f9038 +INFO:root:PassingDataObject: nmdc:97c8b1cf6ed46b491e45433c15c95fd4 +INFO:root:PassingDataObject: nmdc:ec9092a04b55e11fe3ff6d6e37cee59f +INFO:root:PassingDataObject: nmdc:ac13b6dce668a17407abec0239aff46c +INFO:root:PassingDataObject: nmdc:b49430355667ac520137aca2fbdd7dc3 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321268 +INFO:root:found 1 records +INFO:root:record: nmdc:a9b856016e98a9adf43cd8947b78c430, MAGs Analysis Activity for nmdc:mga0194153 +INFO:root:PassingDataObject: nmdc:6b413c3f99b3d23e73a4626d619a50bd +INFO:root:PassingDataObject: nmdc:5d7850a4c83cbb9ec88e8133e7763332 +INFO:root:PassingDataObject: nmdc:338184375276775995b1093cdf2b1e0d +INFO:root:PassingDataObject: nmdc:8a3a7ffab8106469a609e59f3d58c49f +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a9b856016e98a9adf43cd8947b78c430 +ERROR:root:FailedDataObject: nmdc:23a01b39253f2325cd4139ca8841eae3, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a9b856016e98a9adf43cd8947b78c430, MAGs Analysis Activity for nmdc:mga0194153 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321268 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-x7kvdr37 +INFO:root:legacy_id: gold:Gp0321278 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-x7kvdr37 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86fc64d0b3516a5f4f69 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321278 +INFO:root:found 1 records +INFO:root:record: nmdc:51dc1a161ec54d3efa11858102890dfa, Read QC Activity for nmdc:mga017te69 +INFO:root:PassingDataObject: nmdc:a15775d4847c0b939e0e01f5af56610f +INFO:root:PassingDataObject: nmdc:de18fcca30ee3db3035a3510a8db41d9 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321278 +INFO:root:found 1 records +INFO:root:record: nmdc:51dc1a161ec54d3efa11858102890dfa, ReadBased Analysis Activity for nmdc:mga017te69 +INFO:root:PassingDataObject: nmdc:f93e026443c4d1b7d62be0f360b6260d +INFO:root:PassingDataObject: nmdc:1c860c7fc46efe6a1fc830ce28c7c9a1 +INFO:root:PassingDataObject: nmdc:81ab9daf702fb7f06a97203406df065f +INFO:root:PassingDataObject: nmdc:48cb89adb85e69c59cb086893a0cd9ac +INFO:root:PassingDataObject: nmdc:b87604e33b8f601ed3560e607079c4d5 +INFO:root:PassingDataObject: nmdc:0776cc8c74e7c3121ede909a74784eee +INFO:root:PassingDataObject: nmdc:4994cc6acbb8d371927c7cf92d054fd1 +INFO:root:PassingDataObject: nmdc:f5677fac5c1c95844dc7dc0efef57220 +INFO:root:PassingDataObject: nmdc:8abea70d210b656ad91e557bd7357a13 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321278 +INFO:root:found 1 records +INFO:root:record: nmdc:51dc1a161ec54d3efa11858102890dfa, Assembly Activity for nmdc:mga017te69 +INFO:root:PassingDataObject: nmdc:80e8e5c705305669c0e1156dbc246eb1 +INFO:root:PassingDataObject: nmdc:2a615e5291994cb91e9b7d2d6ccbdad5 +INFO:root:PassingDataObject: nmdc:88ae8d3d718bdf4ee6a076be2f7bc8f1 +INFO:root:PassingDataObject: nmdc:f1c2af140aabc8c8b89f0385db71be61 +INFO:root:PassingDataObject: nmdc:7cfdb4086178edf1937be82825bdbb28 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321278 +INFO:root:found 1 records +INFO:root:record: nmdc:51dc1a161ec54d3efa11858102890dfa, Annotation Activity for nmdc:mga017te69 +INFO:root:PassingDataObject: nmdc:9f7da0e3f5bad91cfa834fefa6f0a077 +INFO:root:PassingDataObject: nmdc:17e525c7f4df0411f012d862217baebc +INFO:root:PassingDataObject: nmdc:f9c1781c1735a30f2cde7e94ab2cef70 +INFO:root:PassingDataObject: nmdc:7318cc7e422d8ff00d8d05d4314248e3 +INFO:root:PassingDataObject: nmdc:d2b65f46ce0325212a324aca09b12015 +INFO:root:PassingDataObject: nmdc:b717df977c2623f61fa776a86f023ece +INFO:root:PassingDataObject: nmdc:372719dded630e11c9f3f18f5c3a3760 +INFO:root:PassingDataObject: nmdc:e529965aca29bad34025a6e00e80001c +INFO:root:PassingDataObject: nmdc:5a44f8b2f6e5ee4e1bc4dc15ba195392 +INFO:root:PassingDataObject: nmdc:8945b10e8b30158e3485b10ee8456d2b +INFO:root:PassingDataObject: nmdc:7e432164b3882fdf1b55ddbd749d84a8 +INFO:root:PassingDataObject: nmdc:3d9c17b6b96bcb2c2645f63389239806 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321278 +INFO:root:found 1 records +INFO:root:record: nmdc:51dc1a161ec54d3efa11858102890dfa, MAGs Analysis Activity for nmdc:mga017te69 +INFO:root:PassingDataObject: nmdc:8ef5816de3eb45c2a83857bd7c30475f +INFO:root:PassingDataObject: nmdc:25ed242f8eae10e9a793ce93f08e49b1 +INFO:root:PassingDataObject: nmdc:b8bf8dfde57d9177dfa20a9ff24f55df +INFO:root:PassingDataObject: nmdc:7b3e0501495739464bae7f9aa63567f2 +INFO:root:PassingDataObject: nmdc:db961ce9101cb90ea85d1518d306fff1 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:51dc1a161ec54d3efa11858102890dfa +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:51dc1a161ec54d3efa11858102890dfa, MAGs Analysis Activity for nmdc:mga017te69 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321278 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-p57kmg31 +INFO:root:legacy_id: gold:Gp0321271 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-p57kmg31 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86cd64d0b3516a5f4f5b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321271 +INFO:root:found 1 records +INFO:root:record: nmdc:0fe003b11eef4ba0c616b561ab0d684c, Read QC Activity for nmdc:mga09q8m07 +INFO:root:PassingDataObject: nmdc:5611928999d2d6f3cd14e2654a4e8a7f +INFO:root:PassingDataObject: nmdc:de6e5f32fe9e57c5bd37cbeeb93f1d0f +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321271 +INFO:root:found 1 records +INFO:root:record: nmdc:0fe003b11eef4ba0c616b561ab0d684c, ReadBased Analysis Activity for nmdc:mga09q8m07 +INFO:root:PassingDataObject: nmdc:f0056f30a9d6b00046b8abb48620e823 +INFO:root:PassingDataObject: nmdc:4d55479f0ab47fcdb4597b2a7e12edd3 +INFO:root:PassingDataObject: nmdc:24f202cba1505c335baca962816824bd +INFO:root:PassingDataObject: nmdc:6704fd18071507e6124debd8695b1ee3 +INFO:root:PassingDataObject: nmdc:4cfebc341906940fc19a1ff38101f9c0 +INFO:root:PassingDataObject: nmdc:e2f13cf2834a58940bce536dbadc9860 +INFO:root:PassingDataObject: nmdc:d6c3d2061f170770ea254bd73831c1a0 +INFO:root:PassingDataObject: nmdc:247d607736d1d745b4938a44ea8a0ec0 +INFO:root:PassingDataObject: nmdc:f83687da95e20aeff16ac41dce588c7f +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321271 +INFO:root:found 1 records +INFO:root:record: nmdc:0fe003b11eef4ba0c616b561ab0d684c, Assembly Activity for nmdc:mga09q8m07 +INFO:root:PassingDataObject: nmdc:1b27d6445f752d4400570d8d3665cca7 +INFO:root:PassingDataObject: nmdc:70f44195d91cde68beacf06955160b71 +INFO:root:PassingDataObject: nmdc:f412aaa501444f1b3ef249a21a418373 +INFO:root:PassingDataObject: nmdc:44f455919fa4828ab0d3e1dd3a18afd1 +INFO:root:PassingDataObject: nmdc:f69c8d310cafd704c1411a4dd29a3be2 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321271 +INFO:root:found 1 records +INFO:root:record: nmdc:0fe003b11eef4ba0c616b561ab0d684c, Annotation Activity for nmdc:mga09q8m07 +INFO:root:PassingDataObject: nmdc:dde8eb36b4e053c0734b07ffeb273964 +INFO:root:PassingDataObject: nmdc:ef5df59e7c54447f48fe3ccfdb795ef9 +INFO:root:PassingDataObject: nmdc:a50f59c38cccd3a1218ef386af262620 +INFO:root:PassingDataObject: nmdc:e0dea6b0f21fa56efdce395507161adc +INFO:root:PassingDataObject: nmdc:75f02e5fe527c169aa7080a4386b1412 +INFO:root:PassingDataObject: nmdc:1633f669ba060b07a656d35407c5a654 +INFO:root:PassingDataObject: nmdc:cd0110c75c24eca8f50e092fb602ccaa +INFO:root:PassingDataObject: nmdc:cf578a11b15a97a770c30418df62d945 +INFO:root:PassingDataObject: nmdc:c73c9e26c7f931ac241a1c41f2611ade +INFO:root:PassingDataObject: nmdc:cea09adbdce7b872a8d1b13863b1b25f +INFO:root:PassingDataObject: nmdc:de5cabb33f3f7948c4f580c056a75879 +INFO:root:PassingDataObject: nmdc:8fe128a28dfa87991d02af637d56cc6d +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321271 +INFO:root:found 1 records +INFO:root:record: nmdc:0fe003b11eef4ba0c616b561ab0d684c, MAGs Analysis Activity for nmdc:mga09q8m07 +INFO:root:PassingDataObject: nmdc:77bb221a38b1dc44efd44d72b5b7a870 +INFO:root:PassingDataObject: nmdc:9b1c46350c2917659b2606312932088f +INFO:root:PassingDataObject: nmdc:beb46d6a07cffd930630060175d43814 +INFO:root:PassingDataObject: nmdc:9aa3ee843777a2cec1815a06931b68c2 +INFO:root:PassingDataObject: nmdc:ee27630f9850a889966d58a5bec0a515 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0fe003b11eef4ba0c616b561ab0d684c +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0fe003b11eef4ba0c616b561ab0d684c, MAGs Analysis Activity for nmdc:mga09q8m07 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321271 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-dy188w64 +INFO:root:legacy_id: gold:Gp0321282 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-dy188w64 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b871464d0b3516a5f4f71 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321282 +INFO:root:found 1 records +INFO:root:record: nmdc:534d3ee21e05a7fe6b324082568cd114, Read QC Activity for nmdc:mga0fe9z11 +INFO:root:PassingDataObject: nmdc:c8360ef341ebe4483c83e8ea5b4956bc +INFO:root:PassingDataObject: nmdc:8025a36fb88013662528bf2a838976a3 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321282 +INFO:root:found 1 records +INFO:root:record: nmdc:534d3ee21e05a7fe6b324082568cd114, ReadBased Analysis Activity for nmdc:mga0fe9z11 +INFO:root:PassingDataObject: nmdc:d82607013c1773ee42d791fde66dc535 +INFO:root:PassingDataObject: nmdc:1cbab6359554ad63477f8fc5ccba8209 +INFO:root:PassingDataObject: nmdc:6d2c564f22536394f9abf42ea57c21fc +INFO:root:PassingDataObject: nmdc:580abbca2b1b425674a04a1bc428c026 +INFO:root:PassingDataObject: nmdc:996795aef0e43b7ec3c585cada9249cf +INFO:root:PassingDataObject: nmdc:cd83dbd354a01359c28fe8163ea02ad7 +INFO:root:PassingDataObject: nmdc:d0bec6925350f5aec4220940cb2e28de +INFO:root:PassingDataObject: nmdc:977cf97cb2c02d171c7699c69097c66f +INFO:root:PassingDataObject: nmdc:de33bbdbdc4afbf63064c15051a311f5 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321282 +INFO:root:found 1 records +INFO:root:record: nmdc:534d3ee21e05a7fe6b324082568cd114, Assembly Activity for nmdc:mga0fe9z11 +INFO:root:PassingDataObject: nmdc:5b402195a08d9dacf61c033693a260bf +INFO:root:PassingDataObject: nmdc:ebd0ef6fc863a0c73941b8d48e30cdd7 +INFO:root:PassingDataObject: nmdc:96c1f47da538ad25b7d8bc51c406540d +INFO:root:PassingDataObject: nmdc:34ffdca6c1d56087bd538f84afc95e6c +INFO:root:PassingDataObject: nmdc:d2d1677aba14003c6cb39f4527dcda44 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321282 +INFO:root:found 1 records +INFO:root:record: nmdc:534d3ee21e05a7fe6b324082568cd114, Annotation Activity for nmdc:mga0fe9z11 +INFO:root:PassingDataObject: nmdc:865d866fa453d74f1f3f98831239607a +INFO:root:PassingDataObject: nmdc:f1fbca7b558ce4ba11ebc5a450d50b56 +INFO:root:PassingDataObject: nmdc:d73fcbbb7f3ffc000497ebdd81464f86 +INFO:root:PassingDataObject: nmdc:78009d51acf979a4bd4025a7f2e31df6 +INFO:root:PassingDataObject: nmdc:7de29a2ef89f11abdc6b91420ad310fe +INFO:root:PassingDataObject: nmdc:d4fd3d798907eb77631e217eb5df80c3 +INFO:root:PassingDataObject: nmdc:3b344e2daf847ab1c46872ea16e47bb0 +INFO:root:PassingDataObject: nmdc:f0159e9278182a9537ab31b38bea4424 +INFO:root:PassingDataObject: nmdc:cd70f50717d82b50af4635a8cad222a9 +INFO:root:PassingDataObject: nmdc:98a82f0a9d6a75c473e434a8c854c869 +INFO:root:PassingDataObject: nmdc:2d88dec334e71e3d8e7852784c1c3014 +INFO:root:PassingDataObject: nmdc:22f5be3152e841194dfa221e47373f1b +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321282 +INFO:root:found 1 records +INFO:root:record: nmdc:534d3ee21e05a7fe6b324082568cd114, MAGs Analysis Activity for nmdc:mga0fe9z11 +INFO:root:PassingDataObject: nmdc:e38e72f5e7d13ff6828dc7523953d299 +INFO:root:PassingDataObject: nmdc:d2442a77e1ce168a45e8e4d95b55e6e6 +INFO:root:PassingDataObject: nmdc:9c50817fc6e958c7beb0020948e32744 +INFO:root:PassingDataObject: nmdc:9d6341b354dd9c6a3ccda5d05f402d52 +INFO:root:PassingDataObject: nmdc:b65c1a51fbe14105800e0e1dccfd59c6 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:534d3ee21e05a7fe6b324082568cd114 +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:534d3ee21e05a7fe6b324082568cd114, MAGs Analysis Activity for nmdc:mga0fe9z11 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321282 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-r2t38w78 +INFO:root:legacy_id: gold:Gp0321281 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-r2t38w78 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b870f64d0b3516a5f4f70 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321281 +INFO:root:found 1 records +INFO:root:record: nmdc:5d7d96366bfdc04c13d0d459ec44d9d6, Read QC Activity for nmdc:mga0wkf778 +INFO:root:PassingDataObject: nmdc:dfa7518337746ce80f46b466ef167f6b +INFO:root:PassingDataObject: nmdc:acd7731f8f5bb1162d7115243c00713c +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321281 +INFO:root:found 1 records +INFO:root:record: nmdc:5d7d96366bfdc04c13d0d459ec44d9d6, ReadBased Analysis Activity for nmdc:mga0wkf778 +INFO:root:PassingDataObject: nmdc:9fe5462aa892257c897ebcbafe9a04c9 +INFO:root:PassingDataObject: nmdc:45989b72c7b23db3ea9d76addb1e53f8 +INFO:root:PassingDataObject: nmdc:74b6c27f1f054e7c5b84afe637ac5606 +INFO:root:PassingDataObject: nmdc:69b9b2ee0c4f7429884ada5182cb1106 +INFO:root:PassingDataObject: nmdc:169236e8f023b7bf42939bd9ac7205ea +INFO:root:PassingDataObject: nmdc:13412c117e3ce8de570d782db4dc32a7 +INFO:root:PassingDataObject: nmdc:7a37c0da9c318e5529ff7c1db26097e7 +INFO:root:PassingDataObject: nmdc:6035b2bfc3e25248836c14facca571e1 +INFO:root:PassingDataObject: nmdc:a0231d0e1a05a9ae40dd2c670c734341 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321281 +INFO:root:found 1 records +INFO:root:record: nmdc:5d7d96366bfdc04c13d0d459ec44d9d6, Assembly Activity for nmdc:mga0wkf778 +INFO:root:PassingDataObject: nmdc:d6c3c419e158e9a4f1646b1a89150a5f +INFO:root:PassingDataObject: nmdc:8f1367c23dc814bf5900506c90643cf5 +INFO:root:PassingDataObject: nmdc:b7841dbb5e0500e9e45a39811bf3268c +INFO:root:PassingDataObject: nmdc:fba72d3d3ea977ece45929e616bcc83c +INFO:root:PassingDataObject: nmdc:b184079cfca21704fe8034e458d91564 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321281 +INFO:root:found 1 records +INFO:root:record: nmdc:5d7d96366bfdc04c13d0d459ec44d9d6, Annotation Activity for nmdc:mga0wkf778 +INFO:root:PassingDataObject: nmdc:691336efe6469c48e135ace31832f9b8 +INFO:root:PassingDataObject: nmdc:72e6dfb4ed277234030eb65e1ba427b1 +INFO:root:PassingDataObject: nmdc:21df0aa26d344a734f35f0ba65effc12 +INFO:root:PassingDataObject: nmdc:617185280875df6f88a90a24d18f35b6 +INFO:root:PassingDataObject: nmdc:6b86e19b0c5d01ddf335b2886715ac75 +INFO:root:PassingDataObject: nmdc:3e1c2f8dd6af29273bf6d26cf9ba2ff0 +INFO:root:PassingDataObject: nmdc:46e1b50d06219eb1831803ce6f1537ca +INFO:root:PassingDataObject: nmdc:9b4ababd39d2fb7603bf0c987b9b5136 +INFO:root:PassingDataObject: nmdc:723bf1d321ab365029f5dfb50195c4f0 +INFO:root:PassingDataObject: nmdc:cb1d1132d82ac9c3b3c95b433ad73c0f +INFO:root:PassingDataObject: nmdc:9cb31b050a3ba2efb29c69c5832de2d3 +INFO:root:PassingDataObject: nmdc:301612cc77aa7c5bc6cb8c3c1f3e8dce +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321281 +INFO:root:found 1 records +INFO:root:record: nmdc:5d7d96366bfdc04c13d0d459ec44d9d6, MAGs Analysis Activity for nmdc:mga0wkf778 +INFO:root:PassingDataObject: nmdc:1a8d73463df64f71a3253bc719543354 +INFO:root:PassingDataObject: nmdc:b87ce069960dbf382beb05ef27081b7e +INFO:root:PassingDataObject: nmdc:eac8838210d2e7d85956d5b06003c3d5 +INFO:root:PassingDataObject: nmdc:d8a9820d612b662f0b74996cb57641e8 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5d7d96366bfdc04c13d0d459ec44d9d6 +ERROR:root:FailedDataObject: nmdc:e2c027dd97b777c073ed0588adf27012, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5d7d96366bfdc04c13d0d459ec44d9d6, MAGs Analysis Activity for nmdc:mga0wkf778 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321281 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-86c56h25 +INFO:root:legacy_id: gold:Gp0321277 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-86c56h25 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86f764d0b3516a5f4f68 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321277 +INFO:root:found 1 records +INFO:root:record: nmdc:a8a526ad1e5caef313473e3d595ab9f1, Read QC Activity for nmdc:mga01enr64 +INFO:root:PassingDataObject: nmdc:246989e0258e3bdddd6c91f155cec622 +INFO:root:PassingDataObject: nmdc:7dd465cd8c96447a3686d90599d56f85 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321277 +INFO:root:found 1 records +INFO:root:record: nmdc:a8a526ad1e5caef313473e3d595ab9f1, ReadBased Analysis Activity for nmdc:mga01enr64 +INFO:root:PassingDataObject: nmdc:67430f517455fb764c05f9cd498ae2f5 +INFO:root:PassingDataObject: nmdc:fd5709fe302af965a7c6aa0f5f555468 +INFO:root:PassingDataObject: nmdc:9186340af39bc24532e43b8b0ff3ba3e +INFO:root:PassingDataObject: nmdc:0f9d0489760934541c8f1df5a13cb6ee +INFO:root:PassingDataObject: nmdc:f38f42312292f41f660b9c0cfd1e7459 +INFO:root:PassingDataObject: nmdc:f2842de0bce44e6e856b7b572d6ef920 +INFO:root:PassingDataObject: nmdc:f61305896b29dbf6d5bcf3126ff21c83 +INFO:root:PassingDataObject: nmdc:8fc7c025e5229364abcb17dad0fedd4e +INFO:root:PassingDataObject: nmdc:e935b7683e6cb871d3b1753c7dab9b13 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321277 +INFO:root:found 1 records +INFO:root:record: nmdc:a8a526ad1e5caef313473e3d595ab9f1, Assembly Activity for nmdc:mga01enr64 +INFO:root:PassingDataObject: nmdc:bec4388105bf4399fd26c8a2d0a7c741 +INFO:root:PassingDataObject: nmdc:07c603212da8fcc06587d41ffdcb8ff2 +INFO:root:PassingDataObject: nmdc:86548c8dfa7ad5284deab8eaade1500c +INFO:root:PassingDataObject: nmdc:dcfc76642e7e873ba578a0968b443029 +INFO:root:PassingDataObject: nmdc:faeb0dcac0283d46ecf40fe51081b84c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321277 +INFO:root:found 1 records +INFO:root:record: nmdc:a8a526ad1e5caef313473e3d595ab9f1, Annotation Activity for nmdc:mga01enr64 +INFO:root:PassingDataObject: nmdc:372836d666856dc472ae0de28b0ae9e5 +INFO:root:PassingDataObject: nmdc:3f72e4b0909d8f02cee16d15a13a26f6 +INFO:root:PassingDataObject: nmdc:5867c5c0c4baa6cf67a711d5229ea5c9 +INFO:root:PassingDataObject: nmdc:820d451dc877308a42682ad5bbde1bb5 +INFO:root:PassingDataObject: nmdc:7ecd66464b46b27f0aa283e56251472d +INFO:root:PassingDataObject: nmdc:0fa303a0225520f7cd7b4ec5138c5c7b +INFO:root:PassingDataObject: nmdc:d825155d5c972f1e18900b6091b714ce +INFO:root:PassingDataObject: nmdc:56a754cfcd0b3e5bbac19cf2e69caf58 +INFO:root:PassingDataObject: nmdc:8ebb3fca1a5cfeb370fb4831a97ee3d2 +INFO:root:PassingDataObject: nmdc:0645b83962e4f72b9f13ebf720d1f899 +INFO:root:PassingDataObject: nmdc:b14c39f9b1cf8bb2babfb108c0cba8aa +INFO:root:PassingDataObject: nmdc:b349ea5b793432d5a26dc3ca17a6a0ec +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321277 +INFO:root:found 1 records +INFO:root:record: nmdc:a8a526ad1e5caef313473e3d595ab9f1, MAGs Analysis Activity for nmdc:mga01enr64 +INFO:root:PassingDataObject: nmdc:78fb6e5993b46cff8da066ae50c533c1 +INFO:root:PassingDataObject: nmdc:5905bbab587dfa7d30b17bf81a301225 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a8a526ad1e5caef313473e3d595ab9f1 +ERROR:root:FailedDataObject: nmdc:7c4ac08a51c2f990dbcfaf8c245c8b82, +ERROR:root:FailedDataObject: nmdc:c65ece41fc5213787336288f3ac967dc, +ERROR:root:FailedDataObject: nmdc:338532067440b6407f95ff8313a95645, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a8a526ad1e5caef313473e3d595ab9f1, MAGs Analysis Activity for nmdc:mga01enr64 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321277 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-cytf1e18 +INFO:root:legacy_id: gold:Gp0321280 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-cytf1e18 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b870864d0b3516a5f4f6d +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321280 +INFO:root:found 1 records +INFO:root:record: nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d, Read QC Activity for nmdc:mga0qt4z46 +INFO:root:PassingDataObject: nmdc:1490a548f47b564bfd24d7b17b844787 +INFO:root:PassingDataObject: nmdc:de054a731a09863cefc28342d7c39c13 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321280 +INFO:root:found 1 records +INFO:root:record: nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d, ReadBased Analysis Activity for nmdc:mga0qt4z46 +INFO:root:PassingDataObject: nmdc:b3a6bfdfecf2097052553bb3dda27c24 +INFO:root:PassingDataObject: nmdc:7432ffe0160ea08c4be19d5f72cb3b07 +INFO:root:PassingDataObject: nmdc:2616ce39000fae4ca07c820a73b45bd2 +INFO:root:PassingDataObject: nmdc:09dbb2d990b0af34a993c7369d02e2da +INFO:root:PassingDataObject: nmdc:c15529b4911e8615a291149e38d49d72 +INFO:root:PassingDataObject: nmdc:2e9cb60bfc458a1a10aae8f058b54e10 +INFO:root:PassingDataObject: nmdc:cf8b3e0b9e4f8af8cfb9fa4ca5bf64e6 +INFO:root:PassingDataObject: nmdc:ddc1c1f5c250a91863eb20e3d9f5dd98 +INFO:root:PassingDataObject: nmdc:a0141802a58de34696e7ce82da3d11dd +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321280 +INFO:root:found 1 records +INFO:root:record: nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d, Assembly Activity for nmdc:mga0qt4z46 +INFO:root:PassingDataObject: nmdc:61b5086227bbe92eb4e4765244c6c447 +INFO:root:PassingDataObject: nmdc:1b23aba5b089bf6862dbaee1029b20e5 +INFO:root:PassingDataObject: nmdc:52f17dff1da3f6323128aa05ef3e7c24 +INFO:root:PassingDataObject: nmdc:91b73e393baca9d298fa21761ad41d0b +INFO:root:PassingDataObject: nmdc:040acbd366202e9a89228c6619e6dd0a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321280 +INFO:root:found 1 records +INFO:root:record: nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d, Annotation Activity for nmdc:mga0qt4z46 +INFO:root:PassingDataObject: nmdc:38bf1574bf5e43698da98b87f5f24914 +INFO:root:PassingDataObject: nmdc:ca43eeec94b923f07549c355322d8b32 +INFO:root:PassingDataObject: nmdc:16fcc04d7a50cf4126e672afe4ff9b3b +INFO:root:PassingDataObject: nmdc:46ee34c9d812ec0e35b6a3ed85440540 +INFO:root:PassingDataObject: nmdc:4f07866abfe99131f294807c00cd1e54 +INFO:root:PassingDataObject: nmdc:768fb53dbd0dd2c76297196594bd1e15 +INFO:root:PassingDataObject: nmdc:eeb144dbde808478c41e0a6241d9b8d7 +INFO:root:PassingDataObject: nmdc:e37e6064d765d3d53dd0ab2fdf872940 +INFO:root:PassingDataObject: nmdc:a9b314e465fc84a4b12d1be5124425c2 +INFO:root:PassingDataObject: nmdc:22fd86f82a883724179c8b1624253436 +INFO:root:PassingDataObject: nmdc:c3986784c82cd738e64a1bf470eb263c +INFO:root:PassingDataObject: nmdc:017076607e72e44f5071bf45b545ce4f +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321280 +INFO:root:found 1 records +INFO:root:record: nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d, MAGs Analysis Activity for nmdc:mga0qt4z46 +INFO:root:PassingDataObject: nmdc:716f5a7193a9c231ef69f5d1488d062d +INFO:root:PassingDataObject: nmdc:2f2f207eb7dcd065b9f3de8681034a5b +INFO:root:PassingDataObject: nmdc:4042e89edfd364d4a25f7faf8c0474c3 +INFO:root:PassingDataObject: nmdc:fcb2008bf3f7c5ff2d9bcf0ab0068eb4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d +ERROR:root:FailedDataObject: nmdc:53c45f99a11932252f2acf2407e45274, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d, MAGs Analysis Activity for nmdc:mga0qt4z46 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321280 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-m0fem526 +INFO:root:legacy_id: gold:Gp0321283 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-m0fem526 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b871d64d0b3516a5f4f74 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321283 +INFO:root:found 1 records +INFO:root:record: nmdc:60eb5be289ff86d24e3fc88054f62e47, Read QC Activity for nmdc:mga02kzm09 +INFO:root:PassingDataObject: nmdc:61a27d21f40e4c66db176be315aac38e +INFO:root:PassingDataObject: nmdc:2d5eedf143c8143a52dc7e56894c9925 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321283 +INFO:root:found 1 records +INFO:root:record: nmdc:60eb5be289ff86d24e3fc88054f62e47, ReadBased Analysis Activity for nmdc:mga02kzm09 +INFO:root:PassingDataObject: nmdc:69b1de9fbd7504ae46c158bdca2a19f8 +INFO:root:PassingDataObject: nmdc:82a6ca11a4123806498e234abe4b2029 +INFO:root:PassingDataObject: nmdc:aee8566921d09ddead3a4594c3c06ef1 +INFO:root:PassingDataObject: nmdc:23373a05b8edb00eed25390537b3032a +INFO:root:PassingDataObject: nmdc:8ecd4644a922a29076de36a48ee3fe5f +INFO:root:PassingDataObject: nmdc:5371ba26d3ba739db5756434d80f4902 +INFO:root:PassingDataObject: nmdc:8700b800f5a6990e57c345b91d877daa +INFO:root:PassingDataObject: nmdc:3817d8a9ad06854638d87d959366fdf8 +INFO:root:PassingDataObject: nmdc:feee4f7b84c20fca930d918f71747287 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321283 +INFO:root:found 1 records +INFO:root:record: nmdc:60eb5be289ff86d24e3fc88054f62e47, Assembly Activity for nmdc:mga02kzm09 +INFO:root:PassingDataObject: nmdc:e6b843ab51d9592431a2bab88c247540 +INFO:root:PassingDataObject: nmdc:92ef36906affdfac2b6245ccb8c650da +INFO:root:PassingDataObject: nmdc:eddb313a82c34061e76b9ce7b2226d6c +INFO:root:PassingDataObject: nmdc:2b1b8f77377612facefa23e68c78cb89 +INFO:root:PassingDataObject: nmdc:e0f1a3af362a7e8845c8a405412978f5 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321283 +INFO:root:found 1 records +INFO:root:record: nmdc:60eb5be289ff86d24e3fc88054f62e47, Annotation Activity for nmdc:mga02kzm09 +INFO:root:PassingDataObject: nmdc:b26678c579067fadd0f307e639004170 +INFO:root:PassingDataObject: nmdc:45ef5952b2144b2453f80bde7d27bc01 +INFO:root:PassingDataObject: nmdc:5911a9c67ef47c22b6acfa3b76e9c8f6 +INFO:root:PassingDataObject: nmdc:6105de138481dcd8340614887bf92caa +INFO:root:PassingDataObject: nmdc:c1f0d88db95dc4165c14bc5757dcbb49 +INFO:root:PassingDataObject: nmdc:7a139750fd898f76ecfce0bc63aa0e6c +INFO:root:PassingDataObject: nmdc:8cf9a34acda9a5e33017199caabca359 +INFO:root:PassingDataObject: nmdc:24fb793141432a3ca3d2c675834e7521 +INFO:root:PassingDataObject: nmdc:142424dc4df5473559272c1acb1ff3e6 +INFO:root:PassingDataObject: nmdc:3111f8ccc68c17198c2becbd4ed51142 +INFO:root:PassingDataObject: nmdc:17a62b47687889a8742cc0592c791d01 +INFO:root:PassingDataObject: nmdc:037331e664c4cd01dd09b84353007702 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321283 +INFO:root:found 1 records +INFO:root:record: nmdc:60eb5be289ff86d24e3fc88054f62e47, MAGs Analysis Activity for nmdc:mga02kzm09 +INFO:root:PassingDataObject: nmdc:2a7661010f2340216933dc88531aa7c5 +INFO:root:PassingDataObject: nmdc:4151928e6faaa5e3da36d5eb53f805ac +INFO:root:PassingDataObject: nmdc:c06039dc43953a44ab0ed94968e7c3a6 +INFO:root:PassingDataObject: nmdc:6e975264e8ea1c419c49ddc9ea18c984 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:60eb5be289ff86d24e3fc88054f62e47 +ERROR:root:FailedDataObject: nmdc:b1eae7de9053e12a4cf7cabaa82e84f8, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:60eb5be289ff86d24e3fc88054f62e47, MAGs Analysis Activity for nmdc:mga02kzm09 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321283 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-4kznfd65 +INFO:root:legacy_id: gold:Gp0321284 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-4kznfd65 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b872264d0b3516a5f4f75 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321284 +INFO:root:found 1 records +INFO:root:record: nmdc:a4390cc0018042fc45d5bc312bd09d3d, Read QC Activity for nmdc:mga0x3mj77 +INFO:root:PassingDataObject: nmdc:8e97d689e715b4fa8a84b521b18a868c +INFO:root:PassingDataObject: nmdc:161cd3ebf36d45dc9ae2bfffd1ab157e +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321284 +INFO:root:found 1 records +INFO:root:record: nmdc:a4390cc0018042fc45d5bc312bd09d3d, ReadBased Analysis Activity for nmdc:mga0x3mj77 +INFO:root:PassingDataObject: nmdc:59c89b629101fbc84ce35b5e52ef6fe9 +INFO:root:PassingDataObject: nmdc:9f8322e37b59281bcb8f8cc8afb4cf27 +INFO:root:PassingDataObject: nmdc:7355c08996fd58b93d3799b55a4ed3e7 +INFO:root:PassingDataObject: nmdc:e6521f9d55e6690258870604c49be45b +INFO:root:PassingDataObject: nmdc:df91d2d46863fa9354337d20161915cd +INFO:root:PassingDataObject: nmdc:7642cd121d1b10a7a767fdcb453d4fb1 +INFO:root:PassingDataObject: nmdc:4c523329c748e522d31b71e61b606536 +INFO:root:PassingDataObject: nmdc:4d0ed072b8b62455c8449b8cf042ca3f +INFO:root:PassingDataObject: nmdc:a288ba2bae5a3439362ea723ea02f1e6 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321284 +INFO:root:found 1 records +INFO:root:record: nmdc:a4390cc0018042fc45d5bc312bd09d3d, Assembly Activity for nmdc:mga0x3mj77 +INFO:root:PassingDataObject: nmdc:5598121509ca0507ca3f292ca69e103a +INFO:root:PassingDataObject: nmdc:afc7fc277552ff99c757d5e2dff3b66c +INFO:root:PassingDataObject: nmdc:a2407b08f94d6447d28d099f7d45d6e8 +INFO:root:PassingDataObject: nmdc:3121416548698ac3a8b8aebb20762b24 +INFO:root:PassingDataObject: nmdc:7c490fa0ce466b60320e4faae0cd5333 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321284 +INFO:root:found 1 records +INFO:root:record: nmdc:a4390cc0018042fc45d5bc312bd09d3d, Annotation Activity for nmdc:mga0x3mj77 +INFO:root:PassingDataObject: nmdc:12bae9171680e9bfd0b3d5deb0d3b1f7 +INFO:root:PassingDataObject: nmdc:e67dd3fbd0d09810f73770083281a34a +INFO:root:PassingDataObject: nmdc:fcdfef609a942fa2dd9312f141d1d6e9 +INFO:root:PassingDataObject: nmdc:b46d48318bcf24a163fb0f82414cced1 +INFO:root:PassingDataObject: nmdc:71e6d4b6ff6323a337bb534f657933b2 +INFO:root:PassingDataObject: nmdc:c63939e2acb4224500a0781f3b6f2eb2 +INFO:root:PassingDataObject: nmdc:f1c396c99a7d7bfb3af7f57b3eb6f792 +INFO:root:PassingDataObject: nmdc:288b5fde9088c218153f636d243b7a26 +INFO:root:PassingDataObject: nmdc:65ca80a4721645d0fac1aa55cef14bd0 +INFO:root:PassingDataObject: nmdc:7ecfd9463310391ce7becfc1fe481c06 +INFO:root:PassingDataObject: nmdc:090ec0af10c79cedb217ecdb775063d2 +INFO:root:PassingDataObject: nmdc:538136f7c71803fc7502e9dd4eab4bfb +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321284 +INFO:root:found 1 records +INFO:root:record: nmdc:a4390cc0018042fc45d5bc312bd09d3d, MAGs Analysis Activity for nmdc:mga0x3mj77 +INFO:root:PassingDataObject: nmdc:5723e997a25d5154e9f57243a54be64b +INFO:root:PassingDataObject: nmdc:870885de3ed9586c86c9a8b0e60ea909 +INFO:root:PassingDataObject: nmdc:b49238fb0c7f1c41bc3a3b67f840d1f4 +INFO:root:PassingDataObject: nmdc:de8328a0c04d2c3093514a8ee54e02f6 +INFO:root:PassingDataObject: nmdc:7b0cf7c9631007cf3097995eef1fd9f0 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a4390cc0018042fc45d5bc312bd09d3d +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a4390cc0018042fc45d5bc312bd09d3d, MAGs Analysis Activity for nmdc:mga0x3mj77 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321284 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-rbz91067 +INFO:root:legacy_id: gold:Gp0321285 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-rbz91067 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b872764d0b3516a5f4f77 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321285 +INFO:root:found 1 records +INFO:root:record: nmdc:cf8fa9baf49f77cfa34b94cdcdb04c71, Read QC Activity for nmdc:mga0xz8h91 +INFO:root:PassingDataObject: nmdc:4280f5bd913db920fc740bce8a44e740 +INFO:root:PassingDataObject: nmdc:4102d90bf1f0d9de388de0c7c3e3e80c +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321285 +INFO:root:found 1 records +INFO:root:record: nmdc:cf8fa9baf49f77cfa34b94cdcdb04c71, ReadBased Analysis Activity for nmdc:mga0xz8h91 +INFO:root:PassingDataObject: nmdc:c507304976b0ae1ad3b70d9cb8818751 +INFO:root:PassingDataObject: nmdc:a095cf01d022907390444e03adb45698 +INFO:root:PassingDataObject: nmdc:138dd89f5ff113a27e6f01ddb3508d59 +INFO:root:PassingDataObject: nmdc:51cb6af211a9f216ab37feb550adfe62 +INFO:root:PassingDataObject: nmdc:3afa6c79ed038fd0ce9a1de6170e0699 +INFO:root:PassingDataObject: nmdc:63ef79aa95c485b5ed22ded4cd6b648f +INFO:root:PassingDataObject: nmdc:32e6a4c1669af02ecb2f92a1e8c2bd06 +INFO:root:PassingDataObject: nmdc:43f61b921fa2f9ea05d6dc00fa25ef88 +INFO:root:PassingDataObject: nmdc:de9b9423990450f2dbd43d8155998515 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321285 +INFO:root:found 1 records +INFO:root:record: nmdc:cf8fa9baf49f77cfa34b94cdcdb04c71, Assembly Activity for nmdc:mga0xz8h91 +INFO:root:PassingDataObject: nmdc:ab91d651931f1eb581ac3844b16ad425 +INFO:root:PassingDataObject: nmdc:2c956ebf898b5d095d9e70c1a4a9805b +INFO:root:PassingDataObject: nmdc:62b9c7c60a9012ffd7e766d16723ed06 +INFO:root:PassingDataObject: nmdc:72b632969f05a33031aed4fa4cb70510 +INFO:root:PassingDataObject: nmdc:a3aae829393993f0c8bf9164ba752954 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321285 +INFO:root:found 1 records +INFO:root:record: nmdc:cf8fa9baf49f77cfa34b94cdcdb04c71, Annotation Activity for nmdc:mga0xz8h91 +INFO:root:PassingDataObject: nmdc:add64443aa99916814099238c846758a +INFO:root:PassingDataObject: nmdc:1557987ec15bd696634b62a84127d5c2 +INFO:root:PassingDataObject: nmdc:5cb52145d2f58ed7214778bae6aa82db +INFO:root:PassingDataObject: nmdc:4ba23acc67f2f7f2e1b368e46536dbb2 +INFO:root:PassingDataObject: nmdc:50889a647fdbf3c8dfe3c959a653a641 +INFO:root:PassingDataObject: nmdc:366ba23aabd0d68f97f30b901581f3d9 +INFO:root:PassingDataObject: nmdc:d2a3175a8d384981e9e10142dbe1a98a +INFO:root:PassingDataObject: nmdc:bafeb738e26d8bca659ba3e33adccd30 +INFO:root:PassingDataObject: nmdc:9a98ce3ec6fd08ecd45f2feed236751d +INFO:root:PassingDataObject: nmdc:37db6c9bfb2c0f47c58dea7ae2943c2c +INFO:root:PassingDataObject: nmdc:69d10297f7de5e525b4c8f6975521e41 +INFO:root:PassingDataObject: nmdc:d1d66bb7c745f507ae2cbb76b390b695 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321285 +INFO:root:found 1 records +INFO:root:record: nmdc:cf8fa9baf49f77cfa34b94cdcdb04c71, MAGs Analysis Activity for nmdc:mga0xz8h91 +INFO:root:PassingDataObject: nmdc:aa585e7ca35fe19d4efabf8766f13467 +INFO:root:PassingDataObject: nmdc:b4d170d315f6f70669a6aac6f3d6db98 +INFO:root:PassingDataObject: nmdc:276b238bd54bb6fa8c481f4f95b3ac67 +INFO:root:PassingDataObject: nmdc:f19ec52280200441d8a7567fc0027402 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:cf8fa9baf49f77cfa34b94cdcdb04c71 +ERROR:root:FailedDataObject: nmdc:0e7471a27bc0128573a23e9af444c157, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:cf8fa9baf49f77cfa34b94cdcdb04c71, MAGs Analysis Activity for nmdc:mga0xz8h91 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321285 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-8wq76j90 +INFO:root:legacy_id: gold:Gp0321287 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-8wq76j90 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b879064d0b3516a5f4f9c +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321287 +INFO:root:found 1 records +INFO:root:record: nmdc:1b1e727ee5bf8e6f8750f3a606b3acfc, Read QC Activity for nmdc:mga0vcq217 +INFO:root:PassingDataObject: nmdc:4a84c78fcde8d88905e9e360145c09fb +INFO:root:PassingDataObject: nmdc:b2a11516f5565a53769c1fb0c1230c51 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321287 +INFO:root:found 1 records +INFO:root:record: nmdc:1b1e727ee5bf8e6f8750f3a606b3acfc, ReadBased Analysis Activity for nmdc:mga0vcq217 +INFO:root:PassingDataObject: nmdc:24b65ad4eab875edeb9cd3f4ddde2f7b +INFO:root:PassingDataObject: nmdc:32db943343b22284c61a9b2a40800415 +INFO:root:PassingDataObject: nmdc:77df9750aff14e729d726ff532ed3802 +INFO:root:PassingDataObject: nmdc:e3eb902e9b5378e095bac88050d5fb98 +INFO:root:PassingDataObject: nmdc:b25cc63505927c25af14195c794d0801 +INFO:root:PassingDataObject: nmdc:890f98f3a9e66a92b316379f8abde2ce +INFO:root:PassingDataObject: nmdc:d819920ce3f6e07df48ec284fde5fcf8 +INFO:root:PassingDataObject: nmdc:45cb37d9084982b71f014f99430e896e +INFO:root:PassingDataObject: nmdc:3931ecc9193cdc049cfcca8c6d477540 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321287 +INFO:root:found 1 records +INFO:root:record: nmdc:1b1e727ee5bf8e6f8750f3a606b3acfc, Assembly Activity for nmdc:mga0vcq217 +INFO:root:PassingDataObject: nmdc:d1d74de6468fa00aa88f11c1fb1c8ee8 +INFO:root:PassingDataObject: nmdc:b5421ea79390384c4f088ff6d149b35e +INFO:root:PassingDataObject: nmdc:3bde469728dcd1b1522cd1dbf8a46527 +INFO:root:PassingDataObject: nmdc:e99670106daf2e15284b20a9af57d468 +INFO:root:PassingDataObject: nmdc:d14a0674ff611157803be76882ae83bd +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321287 +INFO:root:found 1 records +INFO:root:record: nmdc:1b1e727ee5bf8e6f8750f3a606b3acfc, Annotation Activity for nmdc:mga0vcq217 +INFO:root:PassingDataObject: nmdc:8869946c67505ff6a6ba3d0dcbcfb529 +INFO:root:PassingDataObject: nmdc:f21d35775e4252ce1671285f0b2859ed +INFO:root:PassingDataObject: nmdc:6cd9eef61cbcb04e5c071cf257032b72 +INFO:root:PassingDataObject: nmdc:8b96ab4865c564c736eb4b7a7a18267d +INFO:root:PassingDataObject: nmdc:be686681e8f70e6040f7d90c809543c7 +INFO:root:PassingDataObject: nmdc:d63667358d5a79920fd9861186b86ab6 +INFO:root:PassingDataObject: nmdc:11b42752d4e34316f67cf529c4b5e0f5 +INFO:root:PassingDataObject: nmdc:d8066c82fd03ea710c72b917a80433ac +INFO:root:PassingDataObject: nmdc:a38cfc6f76f7ba140155a9cc4af23e4e +INFO:root:PassingDataObject: nmdc:4c4f25e0c3a216d9033fb429c3a08bad +INFO:root:PassingDataObject: nmdc:9f73290c551b347962a2cb884f2056d8 +INFO:root:PassingDataObject: nmdc:1a677b1223332fc26473af9242d2e000 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321287 +INFO:root:found 1 records +INFO:root:record: nmdc:1b1e727ee5bf8e6f8750f3a606b3acfc, MAGs Analysis Activity for nmdc:mga0vcq217 +INFO:root:PassingDataObject: nmdc:42a8252ecbd8efd491c0dc2a49a13365 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:1b1e727ee5bf8e6f8750f3a606b3acfc +ERROR:root:FailedDataObject: nmdc:d8b9ecdb7a5b0d60abb7b39c288aa31c, +ERROR:root:FailedDataObject: nmdc:251e7f978d6542bdbba72b1c2b37f7b7, +ERROR:root:FailedDataObject: nmdc:f5b1041e939a586f31aa10b03ab240db, +ERROR:root:FailedDataObject: nmdc:e9b4f09699ca23d482eada4e0294ce2f, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:1b1e727ee5bf8e6f8750f3a606b3acfc, MAGs Analysis Activity for nmdc:mga0vcq217 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321287 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-vkp93136 +INFO:root:legacy_id: gold:Gp0321270 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-vkp93136 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86c764d0b3516a5f4f59 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321270 +INFO:root:found 1 records +INFO:root:record: nmdc:72379f13da6e6f7f7da7dd5a40bfcb79, Read QC Activity for nmdc:mga0xpmn94 +INFO:root:PassingDataObject: nmdc:9ab8ab017fcd4992b4a8efe8c8f1a318 +INFO:root:PassingDataObject: nmdc:f4be1bcf8d834bef32cd34f31855c332 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321270 +INFO:root:found 1 records +INFO:root:record: nmdc:72379f13da6e6f7f7da7dd5a40bfcb79, ReadBased Analysis Activity for nmdc:mga0xpmn94 +INFO:root:PassingDataObject: nmdc:4e972b5545dff18b7bdf67547a541e81 +INFO:root:PassingDataObject: nmdc:6cad1fd9688ec7be8c2bed7f2763f02e +INFO:root:PassingDataObject: nmdc:d5b6c4d596c10c53a456519628e12df6 +INFO:root:PassingDataObject: nmdc:5bb7e40513976b4aae92224f6e01361a +INFO:root:PassingDataObject: nmdc:f0db901bbb8435f0fb9663b96d9daeca +INFO:root:PassingDataObject: nmdc:e591fab1d80ce7a772f0aee372d97cad +INFO:root:PassingDataObject: nmdc:348be0b55dd8fd8b138c1096f70f5ed6 +INFO:root:PassingDataObject: nmdc:defb48da588fbf203b7719ba4bdc887f +INFO:root:PassingDataObject: nmdc:e776f2b3d9895c17e525a455e3ecd8f2 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321270 +INFO:root:found 1 records +INFO:root:record: nmdc:72379f13da6e6f7f7da7dd5a40bfcb79, Assembly Activity for nmdc:mga0xpmn94 +INFO:root:PassingDataObject: nmdc:21235046d8ab17cf3ac65d56f3849195 +INFO:root:PassingDataObject: nmdc:d28ce8b98ecdfec49ab83b0a8cac526b +INFO:root:PassingDataObject: nmdc:fc3848f4bc9f7bd7582a92160513adc2 +INFO:root:PassingDataObject: nmdc:d76a29341f59f138ec059215613a9931 +INFO:root:PassingDataObject: nmdc:659da7b0ed38a6fd97c0f9904e0f3404 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321270 +INFO:root:found 1 records +INFO:root:record: nmdc:72379f13da6e6f7f7da7dd5a40bfcb79, Annotation Activity for nmdc:mga0xpmn94 +INFO:root:PassingDataObject: nmdc:992214f0fba9f877951588a1170df242 +INFO:root:PassingDataObject: nmdc:3453ef97321124f6c144bdd50c2f794f +INFO:root:PassingDataObject: nmdc:13225b1c68b419a2c3f134300ff1cf95 +INFO:root:PassingDataObject: nmdc:269ba0bf764ac41f5aadf024c4f0cfd6 +INFO:root:PassingDataObject: nmdc:f0e620b1ad34ca564b81810ff65f30e6 +INFO:root:PassingDataObject: nmdc:ced392a874508d46f83ecc7b7163e9dc +INFO:root:PassingDataObject: nmdc:3afd3e24c11a563657b79144082c6213 +INFO:root:PassingDataObject: nmdc:d373c5a7d27aab238a5b8ce78febabf0 +INFO:root:PassingDataObject: nmdc:c58f1e55cad560f44b6bb92d8ad22541 +INFO:root:PassingDataObject: nmdc:49cb3244806577b407e03f48c7f1851f +INFO:root:PassingDataObject: nmdc:a5a758eea88ef50b9887aacef570fb22 +INFO:root:PassingDataObject: nmdc:b9b62c08b619390c22ff25502aad332c +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321270 +INFO:root:found 1 records +INFO:root:record: nmdc:72379f13da6e6f7f7da7dd5a40bfcb79, MAGs Analysis Activity for nmdc:mga0xpmn94 +INFO:root:PassingDataObject: nmdc:c451113d71a9484d145586649a31f99b +INFO:root:PassingDataObject: nmdc:7745be8dcf11d07d304690699b1cfb5b +INFO:root:PassingDataObject: nmdc:609bc21840712b5cb54ab7bd6ddb16e4 +INFO:root:PassingDataObject: nmdc:72a54f6e9e7b0789beaaa49ead8d177d +INFO:root:PassingDataObject: nmdc:be8820dbca136c0cff9d102471191a06 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:72379f13da6e6f7f7da7dd5a40bfcb79 +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:72379f13da6e6f7f7da7dd5a40bfcb79, MAGs Analysis Activity for nmdc:mga0xpmn94 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321270 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-gjr6tz30 +INFO:root:legacy_id: gold:Gp0321286 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gjr6tz30 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b872d64d0b3516a5f4f79 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321286 +INFO:root:found 1 records +INFO:root:record: nmdc:691437b2b7c3ac72441d48c7acb23ea6, Read QC Activity for nmdc:mga01ak297 +INFO:root:PassingDataObject: nmdc:7753efcc799660d8636d8e352a9f12df +INFO:root:PassingDataObject: nmdc:33149b76e2ab3e474926c424d92efd59 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321286 +INFO:root:found 1 records +INFO:root:record: nmdc:691437b2b7c3ac72441d48c7acb23ea6, ReadBased Analysis Activity for nmdc:mga01ak297 +INFO:root:PassingDataObject: nmdc:fbb6191d67adce909062f63ff9daeb37 +INFO:root:PassingDataObject: nmdc:0c9f0fd4dcfd1a0cdd4284bc0725e2c2 +INFO:root:PassingDataObject: nmdc:1570a3b175dd9b376193a25b7e0522e8 +INFO:root:PassingDataObject: nmdc:ce0d14ff5848625b582af41739fd79a0 +INFO:root:PassingDataObject: nmdc:d0769a24e88b721b3d49b24ddac605ba +INFO:root:PassingDataObject: nmdc:ddcae2407fa5011316b24276297489ec +INFO:root:PassingDataObject: nmdc:86831cf3d71a02b0ed8644357163a107 +INFO:root:PassingDataObject: nmdc:0c6ff517eec49ba175b3e54e9b67f824 +INFO:root:PassingDataObject: nmdc:77892f62900fae13c60d56558cebde24 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321286 +INFO:root:found 1 records +INFO:root:record: nmdc:691437b2b7c3ac72441d48c7acb23ea6, Assembly Activity for nmdc:mga01ak297 +INFO:root:PassingDataObject: nmdc:4849f2905ee842b8b6bb13058facc9d9 +INFO:root:PassingDataObject: nmdc:be4c223bc796289bcf10779bb2c12484 +INFO:root:PassingDataObject: nmdc:6be863e0b5fdc9756c669b4bed6cac26 +INFO:root:PassingDataObject: nmdc:9740eabfb21fdf93023600c23a807f86 +INFO:root:PassingDataObject: nmdc:2a77564a82ae69d4e23fc3e1c3fb7e31 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321286 +INFO:root:found 1 records +INFO:root:record: nmdc:691437b2b7c3ac72441d48c7acb23ea6, Annotation Activity for nmdc:mga01ak297 +INFO:root:PassingDataObject: nmdc:8f450d3205c844ac57c6dedd115cd217 +INFO:root:PassingDataObject: nmdc:5637e1c38a5aeb4ba68904319c6833fb +INFO:root:PassingDataObject: nmdc:d266cce482135638aee297870356db73 +INFO:root:PassingDataObject: nmdc:5abd4fcc668e19ac02c3711af88f780d +INFO:root:PassingDataObject: nmdc:2766666f3fd05c2422237d118aa649ee +INFO:root:PassingDataObject: nmdc:36ae933ade6bae0520a7c200f71e47fc +INFO:root:PassingDataObject: nmdc:6d095854610cc79e7308d15b1a872954 +INFO:root:PassingDataObject: nmdc:e677447dfca5639ec6432b764f03e751 +INFO:root:PassingDataObject: nmdc:cab78936d8ac9b5c8c1ebb5719ee5628 +INFO:root:PassingDataObject: nmdc:00ef4a4a8ce93264dfb35d12dee7d608 +INFO:root:PassingDataObject: nmdc:e44614a6c11a8668f054437ff9924350 +INFO:root:PassingDataObject: nmdc:a36231926a4971672ee8c62c0430e8b5 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321286 +INFO:root:found 1 records +INFO:root:record: nmdc:691437b2b7c3ac72441d48c7acb23ea6, MAGs Analysis Activity for nmdc:mga01ak297 +INFO:root:PassingDataObject: nmdc:8ba225b06ef2ba58bae9e5182264d61b +INFO:root:PassingDataObject: nmdc:1970aab75d12c8d3a166468d8187b66d +INFO:root:PassingDataObject: nmdc:0c8b876f7bf7f53fdbaedb4ee22081f5 +INFO:root:PassingDataObject: nmdc:136f455d9520973bb16feb197f1106da +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:691437b2b7c3ac72441d48c7acb23ea6 +ERROR:root:FailedDataObject: nmdc:74435a764ce42700c9c650a4e1ea4747, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:691437b2b7c3ac72441d48c7acb23ea6, MAGs Analysis Activity for nmdc:mga01ak297 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321286 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-9c749r88 +INFO:root:legacy_id: gold:Gp0321288 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9c749r88 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b879764d0b3516a5f4f9e +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321288 +INFO:root:found 1 records +INFO:root:record: nmdc:c4f3f8a15d9081e8586ab6fe9c070239, Read QC Activity for nmdc:mga0kdca67 +INFO:root:PassingDataObject: nmdc:35905683a93f9cba9d2be0914e497ff9 +INFO:root:PassingDataObject: nmdc:1c5c42f6c406e47cc950eb18a4abc22c +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321288 +INFO:root:found 1 records +INFO:root:record: nmdc:c4f3f8a15d9081e8586ab6fe9c070239, ReadBased Analysis Activity for nmdc:mga0kdca67 +INFO:root:PassingDataObject: nmdc:c1b9b69457325cffbd58be7b00118afe +INFO:root:PassingDataObject: nmdc:2298d54c63333c8862a50b25cc192ba7 +INFO:root:PassingDataObject: nmdc:4a6db8ede68d95f892ed25626f1c40bd +INFO:root:PassingDataObject: nmdc:8654430a7db995c1df3a4dad1cd149a3 +INFO:root:PassingDataObject: nmdc:70f1b2c21b921c86b7015664efe3eac5 +INFO:root:PassingDataObject: nmdc:d64e5e9c2b672072c6e5c95873507905 +INFO:root:PassingDataObject: nmdc:d1bcf29bb4efadf13251df6ac3128af2 +INFO:root:PassingDataObject: nmdc:1f02ec8315d938c9c6ebb333aadf1d1d +INFO:root:PassingDataObject: nmdc:19545582a02f22aa4485414727a78fcc +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321288 +INFO:root:found 1 records +INFO:root:record: nmdc:c4f3f8a15d9081e8586ab6fe9c070239, Assembly Activity for nmdc:mga0kdca67 +INFO:root:PassingDataObject: nmdc:b9acd28989e47f46e947d388426be2a4 +INFO:root:PassingDataObject: nmdc:3f16f543aca0a782039cdeacfdc2fd1b +INFO:root:PassingDataObject: nmdc:e1d38dde99fa6d77c65b1c7346d01c67 +INFO:root:PassingDataObject: nmdc:48a77f876d9e2f2405578e82cd73e8df +INFO:root:PassingDataObject: nmdc:e3bd6567c015e8b03be8af4803052cd3 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321288 +INFO:root:found 1 records +INFO:root:record: nmdc:c4f3f8a15d9081e8586ab6fe9c070239, Annotation Activity for nmdc:mga0kdca67 +INFO:root:PassingDataObject: nmdc:9488e15b6517b8cb99f96b8bc897b7f2 +INFO:root:PassingDataObject: nmdc:67cba928644d4550afbba9b4eb11c41a +INFO:root:PassingDataObject: nmdc:c087f0868ca32391e96a8c92ffce43e0 +INFO:root:PassingDataObject: nmdc:1db5c14355d25bd8db6fcba34dae9f84 +INFO:root:PassingDataObject: nmdc:abd475811996b16fc22803d1cb1aaac7 +INFO:root:PassingDataObject: nmdc:3ea578f8a90b29e8fd24c7011c8a598d +INFO:root:PassingDataObject: nmdc:dabea0cbbe8eff2f54cd374582348e21 +INFO:root:PassingDataObject: nmdc:6cda9574dcaa07c8fec9f2c2519d7fc0 +INFO:root:PassingDataObject: nmdc:9664cba800286b9d2790e2577891284a +INFO:root:PassingDataObject: nmdc:adec77a0770c2e26cd4c983a425dede0 +INFO:root:PassingDataObject: nmdc:80631533f6ddadac48e8c1a34471493e +INFO:root:PassingDataObject: nmdc:d38bac837c3a56690ac83445b59d1baf +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321288 +INFO:root:found 1 records +INFO:root:record: nmdc:c4f3f8a15d9081e8586ab6fe9c070239, MAGs Analysis Activity for nmdc:mga0kdca67 +INFO:root:PassingDataObject: nmdc:c77a4c98616bb4aa69b699a16ab20e9f +INFO:root:PassingDataObject: nmdc:3d0c8c3097b470f89ceceb600ec3d51e +INFO:root:PassingDataObject: nmdc:b75439b5abd0d4c7ff4ec4e9dee563e4 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:c4f3f8a15d9081e8586ab6fe9c070239 +ERROR:root:FailedDataObject: nmdc:1549ebff32494a594d7ed1155141ce6f, +ERROR:root:FailedDataObject: nmdc:5a12597af96c1f44d48a2af4796e5e0b, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c4f3f8a15d9081e8586ab6fe9c070239, MAGs Analysis Activity for nmdc:mga0kdca67 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321288 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-zsbm5782 +INFO:root:legacy_id: gold:Gp0321290 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zsbm5782 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87a264d0b3516a5f4fa1 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321290 +INFO:root:found 1 records +INFO:root:record: nmdc:a798064b8c51fd4cd87663ee4276646c, Read QC Activity for nmdc:mga0fght98 +INFO:root:PassingDataObject: nmdc:641fcb775ea37f548401537f8e0720ba +INFO:root:PassingDataObject: nmdc:360431e74ee8818091569bc1fa5fb787 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321290 +INFO:root:found 1 records +INFO:root:record: nmdc:a798064b8c51fd4cd87663ee4276646c, ReadBased Analysis Activity for nmdc:mga0fght98 +INFO:root:PassingDataObject: nmdc:edf89c963591996f782ecf4931690fa4 +INFO:root:PassingDataObject: nmdc:5a77b2cd2b63b0d1df30744db4754b9b +INFO:root:PassingDataObject: nmdc:81654266eec858811a30a3e03def8166 +INFO:root:PassingDataObject: nmdc:055052444623abf3c0dab1109dc1e4c4 +INFO:root:PassingDataObject: nmdc:37508b0022762aa4ec522759dcf640b0 +INFO:root:PassingDataObject: nmdc:6616339e853b32b2ad85e7e44e031332 +INFO:root:PassingDataObject: nmdc:ad7a978292b68eca822f27eb028196df +INFO:root:PassingDataObject: nmdc:d85ddb3e0b3fea756bedc4f2ce224913 +INFO:root:PassingDataObject: nmdc:f7b6740ba52c5719927ec0ee7acaed0d +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321290 +INFO:root:found 1 records +INFO:root:record: nmdc:a798064b8c51fd4cd87663ee4276646c, Assembly Activity for nmdc:mga0fght98 +INFO:root:PassingDataObject: nmdc:5575b0771cbef6fc218016691949332a +INFO:root:PassingDataObject: nmdc:23b30f6392045c51e216a5408faa08df +INFO:root:PassingDataObject: nmdc:b2a445b5583d1df1db1ae8cda694003b +INFO:root:PassingDataObject: nmdc:44d8559cc7491a72ddfedfc8e6eca867 +INFO:root:PassingDataObject: nmdc:db294ab78c8be6c96555ba785cc795fa +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321290 +INFO:root:found 1 records +INFO:root:record: nmdc:a798064b8c51fd4cd87663ee4276646c, Annotation Activity for nmdc:mga0fght98 +INFO:root:PassingDataObject: nmdc:1903faa3602efad45436baa899ac76fb +INFO:root:PassingDataObject: nmdc:596e664018fd00512c727a10eac26fb2 +INFO:root:PassingDataObject: nmdc:36f304b51ad01165db6316dc04c0e352 +INFO:root:PassingDataObject: nmdc:cc7e78e4763f045195470622e6562efe +INFO:root:PassingDataObject: nmdc:93e1e4588969530faba0079204144673 +INFO:root:PassingDataObject: nmdc:a9f68cfcb761c8d12880c06b84ab79b0 +INFO:root:PassingDataObject: nmdc:041a5ef8bfd64e0eb2fad6fee5ffd7bd +INFO:root:PassingDataObject: nmdc:296af1b65ae809520faab8cadddc0da5 +INFO:root:PassingDataObject: nmdc:00b273f6a711622697666a64347af020 +INFO:root:PassingDataObject: nmdc:476cdcaee6fdcccbce136587d94451c7 +INFO:root:PassingDataObject: nmdc:8f3d62fbc3fcefc0b5075b74de5b8eb4 +INFO:root:PassingDataObject: nmdc:65ca67132478cfeab545f1b37e530996 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321290 +INFO:root:found 1 records +INFO:root:record: nmdc:a798064b8c51fd4cd87663ee4276646c, MAGs Analysis Activity for nmdc:mga0fght98 +INFO:root:PassingDataObject: nmdc:4c078b7237e5648cd4e896da7762ada7 +INFO:root:PassingDataObject: nmdc:b55b3f8b715c6c1060a5d64b357419cb +INFO:root:PassingDataObject: nmdc:42a23efd86fd08b1262db97dcc7f1846 +INFO:root:PassingDataObject: nmdc:bb5a1a36660fedb11b2d5b036d56a3d9 +INFO:root:PassingDataObject: nmdc:dd76d1e33f42daa27f2518418cf12baa +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a798064b8c51fd4cd87663ee4276646c +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a798064b8c51fd4cd87663ee4276646c, MAGs Analysis Activity for nmdc:mga0fght98 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321290 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-mzk6by23 +INFO:root:legacy_id: gold:Gp0321289 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-mzk6by23 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b879d64d0b3516a5f4fa0 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321289 +INFO:root:found 1 records +INFO:root:record: nmdc:0280232355359cb9fd10451f5c3327f2, Read QC Activity for nmdc:mga0dtmv19 +INFO:root:PassingDataObject: nmdc:9db5cb8590315638516eab33c2aebd57 +INFO:root:PassingDataObject: nmdc:a5e996652e6f3e6d91a8dfcfcb77f02f +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321289 +INFO:root:found 1 records +INFO:root:record: nmdc:0280232355359cb9fd10451f5c3327f2, ReadBased Analysis Activity for nmdc:mga0dtmv19 +INFO:root:PassingDataObject: nmdc:661467c7cebff6749908a1fa70730369 +INFO:root:PassingDataObject: nmdc:26fd95004c18a7b4f2839560b37e677b +INFO:root:PassingDataObject: nmdc:f739e144f64edc59b0a26ea842d9abbc +INFO:root:PassingDataObject: nmdc:c53c3c50d29c30ce8f738bca2bf14647 +INFO:root:PassingDataObject: nmdc:250cb573e87f7e9cd6cd5e9fc98cf543 +INFO:root:PassingDataObject: nmdc:4afbef65b107f5d408fcfdff29b36f5d +INFO:root:PassingDataObject: nmdc:054528de152dffec86f2777689c9ab59 +INFO:root:PassingDataObject: nmdc:dba2057d5e361b3347f0ee29d36b4ef3 +INFO:root:PassingDataObject: nmdc:0630af0353bc72d9d2a0a9eada238345 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321289 +INFO:root:found 1 records +INFO:root:record: nmdc:0280232355359cb9fd10451f5c3327f2, Assembly Activity for nmdc:mga0dtmv19 +INFO:root:PassingDataObject: nmdc:71a1d49f97ceb8977b9d8aebb9303153 +INFO:root:PassingDataObject: nmdc:242cfdf4b326e7a1d69d738cbcce2236 +INFO:root:PassingDataObject: nmdc:de958223583a8ff4c1d526149075f4fa +INFO:root:PassingDataObject: nmdc:dc30889ba26996291b91e872b72d1faa +INFO:root:PassingDataObject: nmdc:7e26054cfc9d2c9b3f37e134c0291890 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321289 +INFO:root:found 1 records +INFO:root:record: nmdc:0280232355359cb9fd10451f5c3327f2, Annotation Activity for nmdc:mga0dtmv19 +INFO:root:PassingDataObject: nmdc:faf2fa143954a1b3af3bae0d7ebceca3 +INFO:root:PassingDataObject: nmdc:efe06b382e840875af399fe53aa44fb4 +INFO:root:PassingDataObject: nmdc:48833a940a6ac531f3e19445078f9d40 +INFO:root:PassingDataObject: nmdc:0605d1c67d71359425dcbc11475a76e4 +INFO:root:PassingDataObject: nmdc:f1ff7849909711dcd99413fe76fe3f4a +INFO:root:PassingDataObject: nmdc:4bf5d5789c2c3cfbecc3105442a727a2 +INFO:root:PassingDataObject: nmdc:557f3b6ede4daede08047be0f34094bd +INFO:root:PassingDataObject: nmdc:d0642db5fcd0cca6798002f0d74d076a +INFO:root:PassingDataObject: nmdc:3a3f5510ad80783c64da8644d5ad0ba2 +INFO:root:PassingDataObject: nmdc:3030a95ef7b65ed8b2e864d253de7014 +INFO:root:PassingDataObject: nmdc:14d50d6fb2327c0d01a5f6404e65b5a6 +INFO:root:PassingDataObject: nmdc:e76cf80331faca836b7637f168bbea25 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321289 +INFO:root:found 1 records +INFO:root:record: nmdc:0280232355359cb9fd10451f5c3327f2, MAGs Analysis Activity for nmdc:mga0dtmv19 +INFO:root:PassingDataObject: nmdc:ee5105db807bf3e6044a360e2f4b0200 +INFO:root:PassingDataObject: nmdc:f3993cfc1aeeb4beefe9e611a35e837e +INFO:root:PassingDataObject: nmdc:df21e42c589414ddef7aa3eca1235ce5 +INFO:root:PassingDataObject: nmdc:b5ec84d8b62af772f633c8b331db5a11 +INFO:root:PassingDataObject: nmdc:1952465aa17d46ba76d054ccff319a35 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:0280232355359cb9fd10451f5c3327f2 +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0280232355359cb9fd10451f5c3327f2, MAGs Analysis Activity for nmdc:mga0dtmv19 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321289 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-khgaac94 +INFO:root:legacy_id: gold:Gp0321291 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-khgaac94 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87aa64d0b3516a5f4fa4 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321291 +INFO:root:found 1 records +INFO:root:record: nmdc:bff1ad6f01056c624761521883e250a2, Read QC Activity for nmdc:mga0ghbe20 +INFO:root:PassingDataObject: nmdc:ac07bea7e5b31c365266d2244969fb1d +INFO:root:PassingDataObject: nmdc:27c47bd6f9abd55c89427d552310e983 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321291 +INFO:root:found 1 records +INFO:root:record: nmdc:bff1ad6f01056c624761521883e250a2, ReadBased Analysis Activity for nmdc:mga0ghbe20 +INFO:root:PassingDataObject: nmdc:d2034340b5af3d68effd9cc54143bff5 +INFO:root:PassingDataObject: nmdc:8d90dd78442ccaf29ac535ca39669d14 +INFO:root:PassingDataObject: nmdc:bda75de08d593e338cf0964eff722d39 +INFO:root:PassingDataObject: nmdc:2100a08e510be54a74e16862a86834d2 +INFO:root:PassingDataObject: nmdc:a8b78bb750855d0f132b3aa79e0a5319 +INFO:root:PassingDataObject: nmdc:cebbd0a5cd108a40db64a3d8b7ccf532 +INFO:root:PassingDataObject: nmdc:43dfc51d1c3a55d985594cd1cc8c7d11 +INFO:root:PassingDataObject: nmdc:cab6f72ccb985a47b6b3b739563fdb5d +INFO:root:PassingDataObject: nmdc:6b5e716ed72935137a306b714d670362 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321291 +INFO:root:found 1 records +INFO:root:record: nmdc:bff1ad6f01056c624761521883e250a2, Assembly Activity for nmdc:mga0ghbe20 +INFO:root:PassingDataObject: nmdc:20f68c15dd397b960a77f149326b63fe +INFO:root:PassingDataObject: nmdc:46fce2e759e2fb050a325f2aed995d12 +INFO:root:PassingDataObject: nmdc:de9ef5a344ffc1cdc49cfe34eedea78c +INFO:root:PassingDataObject: nmdc:eff2bb184ddf83addd436dfc18f86a5f +INFO:root:PassingDataObject: nmdc:c3574a21cb4ecb5cc79abee1a1a73300 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321291 +INFO:root:found 1 records +INFO:root:record: nmdc:bff1ad6f01056c624761521883e250a2, Annotation Activity for nmdc:mga0ghbe20 +INFO:root:PassingDataObject: nmdc:5521c54f792c09475d90eca6b41dbc5c +INFO:root:PassingDataObject: nmdc:8b932a17a3b1a9491fd73d1fbf4dc2c0 +INFO:root:PassingDataObject: nmdc:e36bf0bbca25766635065897f6bb7d23 +INFO:root:PassingDataObject: nmdc:d9bf9cfced749739f7e071039e4cd23a +INFO:root:PassingDataObject: nmdc:f55353bc9587c73d2dfff081adda15a7 +INFO:root:PassingDataObject: nmdc:00c8aa37c61d3c6952d15ce8d4342056 +INFO:root:PassingDataObject: nmdc:0021720ca5a1c30c3e983e87b0520503 +INFO:root:PassingDataObject: nmdc:413ce288f1dbd2af4304bf52c0189fbd +INFO:root:PassingDataObject: nmdc:35fc2c5dc087779ac08b99e14a2148f4 +INFO:root:PassingDataObject: nmdc:2ce7f6aee26c77eefd82748301ddabee +INFO:root:PassingDataObject: nmdc:99dc0b1900b744e5a3b032326c9c4448 +INFO:root:PassingDataObject: nmdc:b296200c21edec6dd5a6509c18083e8d +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321291 +INFO:root:found 1 records +INFO:root:record: nmdc:bff1ad6f01056c624761521883e250a2, MAGs Analysis Activity for nmdc:mga0ghbe20 +INFO:root:PassingDataObject: nmdc:ba1fc42e095bbe4ec0b15f927986f9e5 +INFO:root:PassingDataObject: nmdc:5d2ef68f028384489e12bcb14780699c +INFO:root:PassingDataObject: nmdc:1d1f444ce977d1deaaee785e7ff33b43 +INFO:root:PassingDataObject: nmdc:93758d6a09148b37f35ae27a047cd276 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:bff1ad6f01056c624761521883e250a2 +ERROR:root:FailedDataObject: nmdc:353d46732e41b8d72d14d735ef188087, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bff1ad6f01056c624761521883e250a2, MAGs Analysis Activity for nmdc:mga0ghbe20 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321291 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-m00yak64 +INFO:root:legacy_id: gold:Gp0321292 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-m00yak64 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87af64d0b3516a5f4fa5 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321292 +INFO:root:found 1 records +INFO:root:record: nmdc:9e7b128c73ad788f62ec52aea24febf2, Read QC Activity for nmdc:mga0d0xp84 +INFO:root:PassingDataObject: nmdc:61ef361a293f0ad45044144cf29f5fd5 +INFO:root:PassingDataObject: nmdc:8ac3d430b9b1edd97bf3f3d30d9bb72b +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321292 +INFO:root:found 1 records +INFO:root:record: nmdc:9e7b128c73ad788f62ec52aea24febf2, ReadBased Analysis Activity for nmdc:mga0d0xp84 +INFO:root:PassingDataObject: nmdc:733f0d9b1bc5adce174338caca17e47f +INFO:root:PassingDataObject: nmdc:82f90ea597869d6c52c36d33ec0d52e6 +INFO:root:PassingDataObject: nmdc:262cd7350e5b90ff64cb6e418879ee67 +INFO:root:PassingDataObject: nmdc:4ebbd2bb63b6f6419474964e77ee3cdc +INFO:root:PassingDataObject: nmdc:f493541e50ff3fd48ffe42ba0f75ff11 +INFO:root:PassingDataObject: nmdc:6b2f87f0bf5b5bfc8639c7019e409435 +INFO:root:PassingDataObject: nmdc:9a852a74473e0eca026995f84887a37b +INFO:root:PassingDataObject: nmdc:eb6fb77b167a40976a1e9cb5895c0032 +INFO:root:PassingDataObject: nmdc:d46b36f1debe3dd62f905554e169a49c +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321292 +INFO:root:found 1 records +INFO:root:record: nmdc:9e7b128c73ad788f62ec52aea24febf2, Assembly Activity for nmdc:mga0d0xp84 +INFO:root:PassingDataObject: nmdc:b8c05eb7585674fed2bf494b33b653a8 +INFO:root:PassingDataObject: nmdc:32d7ff803371f29acc09586aecd10522 +INFO:root:PassingDataObject: nmdc:4c2410d0acaa0e0f9b23c6dc5a6c6404 +INFO:root:PassingDataObject: nmdc:2803cb6079919601bdca9f5ecf2c6b7d +INFO:root:PassingDataObject: nmdc:111f2b740bb06ac5a570d8cc5e806565 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321292 +INFO:root:found 1 records +INFO:root:record: nmdc:9e7b128c73ad788f62ec52aea24febf2, Annotation Activity for nmdc:mga0d0xp84 +INFO:root:PassingDataObject: nmdc:affed2b9a799ee64792f4f194ee17257 +INFO:root:PassingDataObject: nmdc:b2748093c420572372c530fae69c21f3 +INFO:root:PassingDataObject: nmdc:ed9f6ee42b45ea675a9c4c644398b816 +INFO:root:PassingDataObject: nmdc:d5ceb996ecccd0b7b48cb2c3d2ecc861 +INFO:root:PassingDataObject: nmdc:8a19190313f30c98dccac1987e3d3024 +INFO:root:PassingDataObject: nmdc:f8e9268c902e765f701c1118bd8df28d +INFO:root:PassingDataObject: nmdc:e981528b83ce19a2dc8ba4da12813dc9 +INFO:root:PassingDataObject: nmdc:29140f9db23d291ef1924ce27e195287 +INFO:root:PassingDataObject: nmdc:fc3aa6405b9f174527a0e313cf2f6b3d +INFO:root:PassingDataObject: nmdc:54a33755efe7728b16ced481a4196835 +INFO:root:PassingDataObject: nmdc:311db1a12b14dffb0b56fab0edf296e9 +INFO:root:PassingDataObject: nmdc:e0e16b7c952477ccf592aaada5927f02 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321292 +INFO:root:found 1 records +INFO:root:record: nmdc:9e7b128c73ad788f62ec52aea24febf2, MAGs Analysis Activity for nmdc:mga0d0xp84 +INFO:root:PassingDataObject: nmdc:b16f27f683aea04e7e9b524b61f931dd +INFO:root:PassingDataObject: nmdc:ca9ac2e078586ac2473ff3d2fb649de1 +INFO:root:PassingDataObject: nmdc:bb3724b7831695761f813a1a61481f83 +INFO:root:PassingDataObject: nmdc:fa29f6affa109be304d902af0dca3bf5 +INFO:root:PassingDataObject: nmdc:aefd1d4a2ef126c8102e2710823a16cb +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:9e7b128c73ad788f62ec52aea24febf2 +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:9e7b128c73ad788f62ec52aea24febf2, MAGs Analysis Activity for nmdc:mga0d0xp84 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321292 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-v4rgxw98 +INFO:root:legacy_id: gold:Gp0321274 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-v4rgxw98 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86e564d0b3516a5f4f62 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321274 +INFO:root:found 1 records +INFO:root:record: nmdc:29afabd73ba8023e17d73923392f2e96, Read QC Activity for nmdc:mga0kxk034 +INFO:root:PassingDataObject: nmdc:b779954aebf7bb9fad29ee05905944f1 +INFO:root:PassingDataObject: nmdc:a9457902a473d1f5c218846222ea0d10 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321274 +INFO:root:found 1 records +INFO:root:record: nmdc:29afabd73ba8023e17d73923392f2e96, ReadBased Analysis Activity for nmdc:mga0kxk034 +INFO:root:PassingDataObject: nmdc:5258264f975bf48082783a25556b957e +INFO:root:PassingDataObject: nmdc:6faaecfad62bb2a4df8a9523134b7ba6 +INFO:root:PassingDataObject: nmdc:081329836d7f9f5027a068b58706a19e +INFO:root:PassingDataObject: nmdc:10f8b3ccd601ed80ecbd1cc565fa4cad +INFO:root:PassingDataObject: nmdc:78a6e598ce521cae8f3cb8ef1670374c +INFO:root:PassingDataObject: nmdc:b732bbf269aedf0dd972f62b663e712e +INFO:root:PassingDataObject: nmdc:86581ce4e36f4e295bc0ff99ffaeb03b +INFO:root:PassingDataObject: nmdc:7966c4971623433fb3eac159593e0b1b +INFO:root:PassingDataObject: nmdc:9d8ea04b823faa60f86793512279f108 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321274 +INFO:root:found 1 records +INFO:root:record: nmdc:29afabd73ba8023e17d73923392f2e96, Assembly Activity for nmdc:mga0kxk034 +INFO:root:PassingDataObject: nmdc:b44f4a7e2ae9df7652faa9b71e60e681 +INFO:root:PassingDataObject: nmdc:4447f9f54be19281b1514d6a6d20967a +INFO:root:PassingDataObject: nmdc:1ef33b75e70ad9125f49a28cc7da61ef +INFO:root:PassingDataObject: nmdc:99e63c7c499c0b0330d1b52ede9905f6 +INFO:root:PassingDataObject: nmdc:6638949f95bea541fc2988f3d2cb90f5 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321274 +INFO:root:found 1 records +INFO:root:record: nmdc:29afabd73ba8023e17d73923392f2e96, Annotation Activity for nmdc:mga0kxk034 +INFO:root:PassingDataObject: nmdc:807a1eede47c8ebd82855c2215ae82e1 +INFO:root:PassingDataObject: nmdc:c0b4780f916eec7280c6c4c3ed10f9f3 +INFO:root:PassingDataObject: nmdc:53fb72a3db1aaab4d5f5d2cc05a2928b +INFO:root:PassingDataObject: nmdc:5e1d7a6a8e9934e031c23fdf64ead6c2 +INFO:root:PassingDataObject: nmdc:50ebd65622592abe6eda0e9b1737145f +INFO:root:PassingDataObject: nmdc:b664181c1c3ef8832254a3fba7d3af77 +INFO:root:PassingDataObject: nmdc:6f5e11eb0297b7bee1845cab898d048e +INFO:root:PassingDataObject: nmdc:981bc256f22c3e593a749adb546970a1 +INFO:root:PassingDataObject: nmdc:789ce2d8bcfc2f0f6a77c8c4d743c72c +INFO:root:PassingDataObject: nmdc:b375401d0cc90981ca438f67b25f9fac +INFO:root:PassingDataObject: nmdc:1a2d2e1d49f56e40ad84a9c11f6a2ade +INFO:root:PassingDataObject: nmdc:2da056dd0cfe16ac4a9fb82bb95072e1 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321274 +INFO:root:found 1 records +INFO:root:record: nmdc:29afabd73ba8023e17d73923392f2e96, MAGs Analysis Activity for nmdc:mga0kxk034 +INFO:root:PassingDataObject: nmdc:99a82788cf686f00914a57761e58b547 +INFO:root:PassingDataObject: nmdc:044461422788396c3f7df43019524343 +INFO:root:PassingDataObject: nmdc:529409878191b018390f935d7fd6074e +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:29afabd73ba8023e17d73923392f2e96 +ERROR:root:FailedDataObject: nmdc:e43166c664f75b0d85d8c562aab2be9a, +ERROR:root:FailedDataObject: nmdc:a69f429a634edfbf3187ee557fbfbeff, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:29afabd73ba8023e17d73923392f2e96, MAGs Analysis Activity for nmdc:mga0kxk034 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321274 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-p9tfam59 +INFO:root:legacy_id: gold:Gp0321293 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-p9tfam59 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87b764d0b3516a5f4fa8 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321293 +INFO:root:found 1 records +INFO:root:record: nmdc:fcfbf8a3c6be76506f5e46683e0a6435, Read QC Activity for nmdc:mga07tz563 +INFO:root:PassingDataObject: nmdc:a782f673c7927e4b1ed6ff0f8de79f0d +INFO:root:PassingDataObject: nmdc:6d2837f047c5b3f9f07e75f16d1c519e +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321293 +INFO:root:found 1 records +INFO:root:record: nmdc:fcfbf8a3c6be76506f5e46683e0a6435, ReadBased Analysis Activity for nmdc:mga07tz563 +INFO:root:PassingDataObject: nmdc:6bb73362844b14c1d0f53135face3e0f +INFO:root:PassingDataObject: nmdc:a615781957d75535ef15f5eb4c4b631d +INFO:root:PassingDataObject: nmdc:f18530a05f07e09b177f876b3b648ddf +INFO:root:PassingDataObject: nmdc:bf74dc09be7b799dd5da0a96717406f8 +INFO:root:PassingDataObject: nmdc:02810564e4debf7cdeae327de83e34e2 +INFO:root:PassingDataObject: nmdc:aab8a9dca1d0554d24974b22acc019ea +INFO:root:PassingDataObject: nmdc:5fccefd7c831d804cd7a72f8c25a915c +INFO:root:PassingDataObject: nmdc:91eb9892f9191e8d9434c20c93fd18b9 +INFO:root:PassingDataObject: nmdc:337e2b5cf9b20e2a292c1d0942b0d5f4 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321293 +INFO:root:found 1 records +INFO:root:record: nmdc:fcfbf8a3c6be76506f5e46683e0a6435, Assembly Activity for nmdc:mga07tz563 +INFO:root:PassingDataObject: nmdc:7feeaa2ffba08f39b922dc154dc286bc +INFO:root:PassingDataObject: nmdc:aa229fd80137a13d8a27036c0cbbb30e +INFO:root:PassingDataObject: nmdc:7d5e52f41560c0f39c382b48cbdc410d +INFO:root:PassingDataObject: nmdc:545085d85d5171d44c6dd0b64796b135 +INFO:root:PassingDataObject: nmdc:aaa2e881896f7ab7614e860b201262bb +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321293 +INFO:root:found 1 records +INFO:root:record: nmdc:fcfbf8a3c6be76506f5e46683e0a6435, Annotation Activity for nmdc:mga07tz563 +INFO:root:PassingDataObject: nmdc:40c5441ea35948ecff3ac6458333380a +INFO:root:PassingDataObject: nmdc:77814c542438721f0536db34821ab432 +INFO:root:PassingDataObject: nmdc:b33bccf343da1c9b0e4ae40bcc1f38a4 +INFO:root:PassingDataObject: nmdc:f38d8434f6496caa30415beb24a286fb +INFO:root:PassingDataObject: nmdc:f88f279b4ea581ba7b6f5a053906e1ff +INFO:root:PassingDataObject: nmdc:e7af41153f43f05418999acaa0ff49fe +INFO:root:PassingDataObject: nmdc:90d7f9dea3bf586fb891fe2a47e9fa19 +INFO:root:PassingDataObject: nmdc:760babb0a82d788f3a5ec9887d65abee +INFO:root:PassingDataObject: nmdc:59d37ead05a79098720d1aad05708909 +INFO:root:PassingDataObject: nmdc:cb701aaabc38343a5cb0588126714f9d +INFO:root:PassingDataObject: nmdc:602fa90ec84ada01b5bf157d8457f67e +INFO:root:PassingDataObject: nmdc:dd1516330991473498faed78738f9b31 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321293 +INFO:root:found 1 records +INFO:root:record: nmdc:fcfbf8a3c6be76506f5e46683e0a6435, MAGs Analysis Activity for nmdc:mga07tz563 +INFO:root:PassingDataObject: nmdc:c690843d2c5402bcfcb1e3957b311dfa +INFO:root:PassingDataObject: nmdc:7d816def7476773383237e76be2d5b9b +INFO:root:PassingDataObject: nmdc:f73dbe22e49192f90415477c8ea57b3e +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:fcfbf8a3c6be76506f5e46683e0a6435 +ERROR:root:FailedDataObject: nmdc:b13751bedce9c558f1badaf1c6a4d1ac, +ERROR:root:FailedDataObject: nmdc:143d80592496bc7e3857d6f5c6540e37, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fcfbf8a3c6be76506f5e46683e0a6435, MAGs Analysis Activity for nmdc:mga07tz563 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321293 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-zvtmqd80 +INFO:root:legacy_id: gold:Gp0321294 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zvtmqd80 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87bd64d0b3516a5f4faa +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321294 +INFO:root:found 1 records +INFO:root:record: nmdc:4a9d1ae5eef8c33bdc6843e9e423a474, Read QC Activity for nmdc:mga01dmr31 +INFO:root:PassingDataObject: nmdc:6bbb095dbcf74b0b18e5e550abcc9389 +INFO:root:PassingDataObject: nmdc:c8a90e801a983697a4d3388d6fe816b7 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321294 +INFO:root:found 1 records +INFO:root:record: nmdc:4a9d1ae5eef8c33bdc6843e9e423a474, ReadBased Analysis Activity for nmdc:mga01dmr31 +INFO:root:PassingDataObject: nmdc:62004dfd44ce113077c788a81a47cce1 +INFO:root:PassingDataObject: nmdc:9ad2d6c509955cc39e45ed88ed500669 +INFO:root:PassingDataObject: nmdc:35c80484a9fe573e151a24c420d0344e +INFO:root:PassingDataObject: nmdc:8445457463191ff4ead2d3ead0f41db8 +INFO:root:PassingDataObject: nmdc:d3368419acd5e7e088fbf7c9d2cd4d1f +INFO:root:PassingDataObject: nmdc:39966127d067b7455e494316241cca16 +INFO:root:PassingDataObject: nmdc:b9bb11b75139045dc8c5824fc3d68d1d +INFO:root:PassingDataObject: nmdc:79c11d55a5e5bc1b584ae253d3d257e9 +INFO:root:PassingDataObject: nmdc:ea71733e17e0a2900e403251d12e0e3f +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321294 +INFO:root:found 1 records +INFO:root:record: nmdc:4a9d1ae5eef8c33bdc6843e9e423a474, Assembly Activity for nmdc:mga01dmr31 +INFO:root:PassingDataObject: nmdc:9e5a49a487b6e954ba5f9a10b7fff2af +INFO:root:PassingDataObject: nmdc:c4c8c0eeb4f25cde76403ad20fda51fd +INFO:root:PassingDataObject: nmdc:04913917b5bd6b5b5306d9211ceae115 +INFO:root:PassingDataObject: nmdc:1cba7fad374014aca84d100e85b51344 +INFO:root:PassingDataObject: nmdc:f0f47a1627bb4da05888e56df9ef8b6f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321294 +INFO:root:found 1 records +INFO:root:record: nmdc:4a9d1ae5eef8c33bdc6843e9e423a474, Annotation Activity for nmdc:mga01dmr31 +INFO:root:PassingDataObject: nmdc:935ca3409ac2f4220468470bf26d671d +INFO:root:PassingDataObject: nmdc:3df04dea00385dd849d23ec23739a82a +INFO:root:PassingDataObject: nmdc:9369c9b13f7a761221460a89d57b2efa +INFO:root:PassingDataObject: nmdc:b9d6108615767bc5cdb644ca0be2684c +INFO:root:PassingDataObject: nmdc:3895770d4ed362c336f517ec9bccff5c +INFO:root:PassingDataObject: nmdc:99dfa0436961b95acd63da7444f212ac +INFO:root:PassingDataObject: nmdc:9cbcde8fda7786135e4c169684969000 +INFO:root:PassingDataObject: nmdc:4763669bb718d9d88d957bb2e45b9fd2 +INFO:root:PassingDataObject: nmdc:bc54173b04ad07358ce50de33c96abaf +INFO:root:PassingDataObject: nmdc:132efec15a59bcba57c8ef4e1a6af9c3 +INFO:root:PassingDataObject: nmdc:3fe77c0659664b797f8967dcc6493b41 +INFO:root:PassingDataObject: nmdc:f84cbcb47421251b1192443e989dd721 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321294 +INFO:root:found 1 records +INFO:root:record: nmdc:4a9d1ae5eef8c33bdc6843e9e423a474, MAGs Analysis Activity for nmdc:mga01dmr31 +INFO:root:PassingDataObject: nmdc:8ed0e520f83f1487eb9aa3c54b77a0ee +INFO:root:PassingDataObject: nmdc:867968ccf7b3b5bab6d671ef559eb484 +INFO:root:PassingDataObject: nmdc:7dee8eec23a5819727c42de270a1860e +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:4a9d1ae5eef8c33bdc6843e9e423a474 +ERROR:root:FailedDataObject: nmdc:22e11642c7594860da6154d8212bd501, +ERROR:root:FailedDataObject: nmdc:a2476ea4e6b0effff5a672092bee8065, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4a9d1ae5eef8c33bdc6843e9e423a474, MAGs Analysis Activity for nmdc:mga01dmr31 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321294 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-7keedq73 +INFO:root:legacy_id: gold:Gp0321265 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-7keedq73 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86a564d0b3516a5f4f4f +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321265 +INFO:root:found 1 records +INFO:root:record: nmdc:5be8577a376c7dec956ad257a385125b, Read QC Activity for nmdc:mga0bm6d38 +INFO:root:PassingDataObject: nmdc:2167c6c6d6c4317117bf75b486be88ef +INFO:root:PassingDataObject: nmdc:de10b63f9e7b663c06ca4a78aebd1cb2 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321265 +INFO:root:found 1 records +INFO:root:record: nmdc:5be8577a376c7dec956ad257a385125b, ReadBased Analysis Activity for nmdc:mga0bm6d38 +INFO:root:PassingDataObject: nmdc:3a11a29f40628d4d53bb894d20fb8e2d +INFO:root:PassingDataObject: nmdc:a9e1647a28b098cf269d5e154b43fa3c +INFO:root:PassingDataObject: nmdc:f88c7b38bcbf175a3116d762833faebe +INFO:root:PassingDataObject: nmdc:c70423dc5b92f4c74ed4178dde179f59 +INFO:root:PassingDataObject: nmdc:36543581a3d7ad606ed293691e8bec10 +INFO:root:PassingDataObject: nmdc:4d64a6ff557dd72a5a22557cd8a7a32e +INFO:root:PassingDataObject: nmdc:0e1c0ea373e7513b319a516358a6b216 +INFO:root:PassingDataObject: nmdc:e6fa5b3755e460f7547c44ce645397d3 +INFO:root:PassingDataObject: nmdc:6ac8711e28d251ca351e4da4af6ffed5 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321265 +INFO:root:found 1 records +INFO:root:record: nmdc:5be8577a376c7dec956ad257a385125b, Assembly Activity for nmdc:mga0bm6d38 +INFO:root:PassingDataObject: nmdc:e59a7ad0b531c4791450019a8aadbc42 +INFO:root:PassingDataObject: nmdc:ee9f177ab7385365d32272bb2713fd4e +INFO:root:PassingDataObject: nmdc:5ec0113d1df6e2adc5e3f59e433b15b6 +INFO:root:PassingDataObject: nmdc:07536ba9d3ba71dc777db9f20a9082ef +INFO:root:PassingDataObject: nmdc:3b708f327946ad1957a111c2aa1d3011 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321265 +INFO:root:found 1 records +INFO:root:record: nmdc:5be8577a376c7dec956ad257a385125b, Annotation Activity for nmdc:mga0bm6d38 +INFO:root:PassingDataObject: nmdc:2fd7fe1070428f633cd4d7507f493d40 +INFO:root:PassingDataObject: nmdc:f57caf8df00837472017d85c98e26b6f +INFO:root:PassingDataObject: nmdc:0ef9a05a914c2829af1dc0f5aab25045 +INFO:root:PassingDataObject: nmdc:763b48e098e0cea05edd8a15f5001fb5 +INFO:root:PassingDataObject: nmdc:e9cc208e4437c66cf58124a1356afd0b +INFO:root:PassingDataObject: nmdc:54043c691267d7c4adafef812103c693 +INFO:root:PassingDataObject: nmdc:9479e6f68a6150f58d7fae378ddb092a +INFO:root:PassingDataObject: nmdc:59cf243e63696eb37ff8abb63d17af69 +INFO:root:PassingDataObject: nmdc:2348a58929c5547ecba4381c35782c07 +INFO:root:PassingDataObject: nmdc:079306a6416ef7111821e930b56de06e +INFO:root:PassingDataObject: nmdc:df782cdfb81420a8d66372422abb0e2b +INFO:root:PassingDataObject: nmdc:04e7b63dd70ac640ae9b53c6ac5ad0d8 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321265 +INFO:root:found 1 records +INFO:root:record: nmdc:5be8577a376c7dec956ad257a385125b, MAGs Analysis Activity for nmdc:mga0bm6d38 +INFO:root:PassingDataObject: nmdc:5a5d484010d73048dd328422a4aab52e +INFO:root:PassingDataObject: nmdc:e33fdf474baf5e5d8b338b3d97194675 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5be8577a376c7dec956ad257a385125b +ERROR:root:FailedDataObject: nmdc:b1c3957b53bd96b2a2c00161eb283cf7, +ERROR:root:FailedDataObject: nmdc:20505d819238207ac4872847017f99a0, +ERROR:root:FailedDataObject: nmdc:a67c6f04b428965037d270e192cd3a3f, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5be8577a376c7dec956ad257a385125b, MAGs Analysis Activity for nmdc:mga0bm6d38 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321265 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-03ayck44 +INFO:root:legacy_id: gold:Gp0321295 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-03ayck44 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87c164d0b3516a5f4fab +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321295 +INFO:root:found 1 records +INFO:root:record: nmdc:6156ca2868babc1b9596546b81e4351f, Read QC Activity for nmdc:mga0h21f66 +INFO:root:PassingDataObject: nmdc:9deab80a76ea5d0e6b42b42145c3dc9f +INFO:root:PassingDataObject: nmdc:3080f7421a1ae1f2277cbaa9e3c2f4b2 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321295 +INFO:root:found 1 records +INFO:root:record: nmdc:6156ca2868babc1b9596546b81e4351f, ReadBased Analysis Activity for nmdc:mga0h21f66 +INFO:root:PassingDataObject: nmdc:1337e91758d8ea4ad68e558b938d03ef +INFO:root:PassingDataObject: nmdc:98c37d62972a3f792cd4dd9b05b321d3 +INFO:root:PassingDataObject: nmdc:06f4b9a813fca36b978ce496e95c5d6f +INFO:root:PassingDataObject: nmdc:e3ee630974cb8742e15337894de0bf16 +INFO:root:PassingDataObject: nmdc:5f2339d5eee1e8e9e6723e317ff4e2c7 +INFO:root:PassingDataObject: nmdc:5bab9ac33adeaccfd7332f7798a677d2 +INFO:root:PassingDataObject: nmdc:e665f102c86e84ae337464b05b0892ee +INFO:root:PassingDataObject: nmdc:4668fb19499d7c49a3fbd1d98c854711 +INFO:root:PassingDataObject: nmdc:e492825f92855c1332485edccd97409d +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321295 +INFO:root:found 1 records +INFO:root:record: nmdc:6156ca2868babc1b9596546b81e4351f, Assembly Activity for nmdc:mga0h21f66 +INFO:root:PassingDataObject: nmdc:22a38ecea9527d1117fb81706365c4a4 +INFO:root:PassingDataObject: nmdc:7f981111356f72b6c6342cd9324dfc51 +INFO:root:PassingDataObject: nmdc:1229b6920742c35834f1975304cce8a7 +INFO:root:PassingDataObject: nmdc:afeb9654bd0dcb0cc7bcd090fea321a9 +INFO:root:PassingDataObject: nmdc:05421fb3b2f8590b8cf8a4f910983e6f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321295 +INFO:root:found 1 records +INFO:root:record: nmdc:6156ca2868babc1b9596546b81e4351f, Annotation Activity for nmdc:mga0h21f66 +INFO:root:PassingDataObject: nmdc:36e15d536d4a117204cc60c447e78da0 +INFO:root:PassingDataObject: nmdc:cba60ca653631d0bc83749d8c09b0220 +INFO:root:PassingDataObject: nmdc:f348ce63dc31459708274982c8f803e1 +INFO:root:PassingDataObject: nmdc:783642cda13a33b68a3301cc901788d8 +INFO:root:PassingDataObject: nmdc:477e55e6ef6a9c519d0b33b67d88124a +INFO:root:PassingDataObject: nmdc:d78f4a922d81fb45a7c061db5c8aa42a +INFO:root:PassingDataObject: nmdc:cf8ab593443527595e00b45d730b59de +INFO:root:PassingDataObject: nmdc:1f7d8ee64c01b1d647536f1eeb7c9dd2 +INFO:root:PassingDataObject: nmdc:98dab895710a45d92d42cb4cd8fd9c51 +INFO:root:PassingDataObject: nmdc:0b81a8f7b9d03b4ff708fc4e9b7069e8 +INFO:root:PassingDataObject: nmdc:1e8fcfbfbf92674aeac492beafe425dd +INFO:root:PassingDataObject: nmdc:34ab33fc15c65ee5d7a3a1d85214a02b +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321295 +INFO:root:found 1 records +INFO:root:record: nmdc:6156ca2868babc1b9596546b81e4351f, MAGs Analysis Activity for nmdc:mga0h21f66 +INFO:root:PassingDataObject: nmdc:6c0c897129cfe4f635cbe5c76c231d95 +INFO:root:PassingDataObject: nmdc:a2e773a41d0d412959911f3099b521ad +INFO:root:PassingDataObject: nmdc:36fc5a3813d47e077e63297eaba19bc1 +INFO:root:PassingDataObject: nmdc:746ea66686c80c69c8a7da41312d2f34 +INFO:root:PassingDataObject: nmdc:c532bcf0e8cc2c299cafe66841a02636 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:6156ca2868babc1b9596546b81e4351f +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:6156ca2868babc1b9596546b81e4351f, MAGs Analysis Activity for nmdc:mga0h21f66 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321295 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-g9npvr79 +INFO:root:legacy_id: gold:Gp0321273 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-g9npvr79 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86dc64d0b3516a5f4f5f +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321273 +INFO:root:found 1 records +INFO:root:record: nmdc:4116632707c28903a4d804f68a7b0365, Read QC Activity for nmdc:mga0ae8d85 +INFO:root:PassingDataObject: nmdc:688237405acd3cf4f0319b562a512700 +INFO:root:PassingDataObject: nmdc:3cd40e2572881e4c6a228b23db3ca41a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321273 +INFO:root:found 1 records +INFO:root:record: nmdc:4116632707c28903a4d804f68a7b0365, ReadBased Analysis Activity for nmdc:mga0ae8d85 +INFO:root:PassingDataObject: nmdc:6f281c347572f8e361c87cb0deac10df +INFO:root:PassingDataObject: nmdc:6f53c5ec13b270aa8fd2b7ad75f5843c +INFO:root:PassingDataObject: nmdc:094ff744578ba19a6834008c6a4f14ce +INFO:root:PassingDataObject: nmdc:c71cf685b3c224949af63e6d466ff647 +INFO:root:PassingDataObject: nmdc:0070cd052383bd43875882a35e8ea735 +INFO:root:PassingDataObject: nmdc:1639a7067141067dd2eafb4bf4e11988 +INFO:root:PassingDataObject: nmdc:b4161bd78899205f1498b58012979ecb +INFO:root:PassingDataObject: nmdc:22f3dbbc06edc74973638324d5bb6d2d +INFO:root:PassingDataObject: nmdc:90aa477af978c22072ec6fa9e2a44fd6 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321273 +INFO:root:found 1 records +INFO:root:record: nmdc:4116632707c28903a4d804f68a7b0365, Assembly Activity for nmdc:mga0ae8d85 +INFO:root:PassingDataObject: nmdc:1cec9e7ffa9bcc2ed1ead941f2a4249f +INFO:root:PassingDataObject: nmdc:7fa558a5645205fa09786d53b7b453c8 +INFO:root:PassingDataObject: nmdc:c3bdd512990c6d3eb5705322061d7231 +INFO:root:PassingDataObject: nmdc:9e84736eeb95ee67e6623033efb09560 +INFO:root:PassingDataObject: nmdc:1f8a03c81b395526f3ac95ce1437e9ef +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321273 +INFO:root:found 1 records +INFO:root:record: nmdc:4116632707c28903a4d804f68a7b0365, Annotation Activity for nmdc:mga0ae8d85 +INFO:root:PassingDataObject: nmdc:1c22ac3a53f9973cae74dd1904ea0e9e +INFO:root:PassingDataObject: nmdc:d2a35f49d2ac8da47c9371f2851ac550 +INFO:root:PassingDataObject: nmdc:7e479cbb4f6c5094468c280271efb76c +INFO:root:PassingDataObject: nmdc:382d7b3fff9278b50c0361a7670cd6c1 +INFO:root:PassingDataObject: nmdc:7d5b4d5f7ff78807550930f9287b3f63 +INFO:root:PassingDataObject: nmdc:7f3db57d925ea2410ba3e84409381614 +INFO:root:PassingDataObject: nmdc:2854c1441abc4119ba348851ffb4378b +INFO:root:PassingDataObject: nmdc:ee8731c64398b73ef67c746d2cf9998d +INFO:root:PassingDataObject: nmdc:d04c2a1da3737688c37f0a04db171942 +INFO:root:PassingDataObject: nmdc:3090769d6b788fb6c7247bc337b21e50 +INFO:root:PassingDataObject: nmdc:039f080977a761e650534e2e32bb7983 +INFO:root:PassingDataObject: nmdc:77641739f13fad1163b24da4a9b5ef23 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321273 +INFO:root:found 1 records +INFO:root:record: nmdc:4116632707c28903a4d804f68a7b0365, MAGs Analysis Activity for nmdc:mga0ae8d85 +INFO:root:PassingDataObject: nmdc:489c7ee3593da7a53e659e9314fc291d +INFO:root:PassingDataObject: nmdc:2390235c022a80379b8f07dbd1e5e299 +INFO:root:PassingDataObject: nmdc:b2134a8c5c67b3a81e145c41bdf0e3dd +INFO:root:PassingDataObject: nmdc:d348f7d2bbce2f7059603a8617dfe7cc +INFO:root:PassingDataObject: nmdc:0e997f39fa79e177f3dd293ded6c6507 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:4116632707c28903a4d804f68a7b0365 +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4116632707c28903a4d804f68a7b0365, MAGs Analysis Activity for nmdc:mga0ae8d85 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321273 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-abj20g75 +INFO:root:legacy_id: gold:Gp0321300 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-abj20g75 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87e264d0b3516a5f4fb6 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321300 +INFO:root:found 1 records +INFO:root:record: nmdc:21d523e4045c130c1c62404601ff11f5, Read QC Activity for nmdc:mga0fdw091 +INFO:root:PassingDataObject: nmdc:73b3cd55d0d8f097cad130e00f1584cd +INFO:root:PassingDataObject: nmdc:816d883eaffef39ff399fe2da81be117 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321300 +INFO:root:found 1 records +INFO:root:record: nmdc:21d523e4045c130c1c62404601ff11f5, ReadBased Analysis Activity for nmdc:mga0fdw091 +INFO:root:PassingDataObject: nmdc:a8336f7c0eb697b99ed370669ae8e8f2 +INFO:root:PassingDataObject: nmdc:50e9a88743f78376b6078e80197ad0d9 +INFO:root:PassingDataObject: nmdc:477f007059dc8e94ccab2640358540d8 +INFO:root:PassingDataObject: nmdc:55f7614d10baad4234cc0b4562470b4a +INFO:root:PassingDataObject: nmdc:d048f1ea9425299040a51f271220e019 +INFO:root:PassingDataObject: nmdc:0f0010934d120aba6a2a915a06edde82 +INFO:root:PassingDataObject: nmdc:691f25aa40cb3dfff7897f48c3996e48 +INFO:root:PassingDataObject: nmdc:890662b712d8590ef72598ead0b8646e +INFO:root:PassingDataObject: nmdc:a7bc08e95abaf614dd44e340d4c3f559 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321300 +INFO:root:found 1 records +INFO:root:record: nmdc:21d523e4045c130c1c62404601ff11f5, Assembly Activity for nmdc:mga0fdw091 +INFO:root:PassingDataObject: nmdc:98e497b81f00d5791b9ebe414350e93e +INFO:root:PassingDataObject: nmdc:a5b181dfed4e930d6c68f65a17d53e5b +INFO:root:PassingDataObject: nmdc:2600d0741334b6e7b59e34a983b87a18 +INFO:root:PassingDataObject: nmdc:8fe50480a06791d759b49c47c06b7ef3 +INFO:root:PassingDataObject: nmdc:b15c97c71149d41c880e46c842ec6af6 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321300 +INFO:root:found 1 records +INFO:root:record: nmdc:21d523e4045c130c1c62404601ff11f5, Annotation Activity for nmdc:mga0fdw091 +INFO:root:PassingDataObject: nmdc:8aec202aea70c04186b6c1a6a309715a +INFO:root:PassingDataObject: nmdc:2ef60b7d3f251cb272ab42d3e2a734de +INFO:root:PassingDataObject: nmdc:7812da6d1b50972960c1c280baefd07e +INFO:root:PassingDataObject: nmdc:49eec1d14cc1735d5bc3e91bc5b75c07 +INFO:root:PassingDataObject: nmdc:f96e7a588986d9364a261f7a86f105d2 +INFO:root:PassingDataObject: nmdc:a86477541c0d030a320182b630bad879 +INFO:root:PassingDataObject: nmdc:e22799ab31d01c6ca120dc0eb0eb815d +INFO:root:PassingDataObject: nmdc:d4cea477dae05273093aabc0209b5f3c +INFO:root:PassingDataObject: nmdc:0dc50a4957fae9d6b1fa83089010d591 +INFO:root:PassingDataObject: nmdc:e90e5e3353c45dd42d2ce5752071e868 +INFO:root:PassingDataObject: nmdc:4209b72f8adc8d83fc5c4183f6661e6a +INFO:root:PassingDataObject: nmdc:2aaa8a1d0b48e125e6848f4188587708 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321300 +INFO:root:found 1 records +INFO:root:record: nmdc:21d523e4045c130c1c62404601ff11f5, MAGs Analysis Activity for nmdc:mga0fdw091 +INFO:root:PassingDataObject: nmdc:b76e68c36dc844648b1c7b0a0ff98cfb +INFO:root:PassingDataObject: nmdc:271627554ffefee4d004fad3960ee192 +INFO:root:PassingDataObject: nmdc:bb5d82e11357c320ce90e525ac8c0727 +INFO:root:PassingDataObject: nmdc:91e65503b694b6e9ddab94c9f8ed9737 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:21d523e4045c130c1c62404601ff11f5 +ERROR:root:FailedDataObject: nmdc:5a753379f90a286939f06a083fb0d9e2, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:21d523e4045c130c1c62404601ff11f5, MAGs Analysis Activity for nmdc:mga0fdw091 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321300 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-6z3pwp16 +INFO:root:legacy_id: gold:Gp0321272 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-6z3pwp16 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86d664d0b3516a5f4f5e +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321272 +INFO:root:found 1 records +INFO:root:record: nmdc:882054466780d767f32534923f0e598b, Read QC Activity for nmdc:mga00yx311 +INFO:root:PassingDataObject: nmdc:04d70de64490246e214d764ffb380353 +INFO:root:PassingDataObject: nmdc:2c0ce563a7935379532cfdcfa63a187b +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321272 +INFO:root:found 1 records +INFO:root:record: nmdc:882054466780d767f32534923f0e598b, ReadBased Analysis Activity for nmdc:mga00yx311 +INFO:root:PassingDataObject: nmdc:f80175ef97f65b404d45f742fe6bbb1a +INFO:root:PassingDataObject: nmdc:2f0ddf9ef26a73b50bbf454bae48dfa0 +INFO:root:PassingDataObject: nmdc:4f887883e4a160a3e7388bde259ae0a4 +INFO:root:PassingDataObject: nmdc:bc06b1ea120ca3c1109047a71268d837 +INFO:root:PassingDataObject: nmdc:743a1217c6217f96951e8ddb7a52b1c0 +INFO:root:PassingDataObject: nmdc:71f859fd698ee5a92bbd6f42fe20b04d +INFO:root:PassingDataObject: nmdc:2b75b4a888b242c778a973bc28a70d1c +INFO:root:PassingDataObject: nmdc:e26add9972db3a209464ea4b4c07ca65 +INFO:root:PassingDataObject: nmdc:751aabbc0408b874f967308cc57c076b +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321272 +INFO:root:found 1 records +INFO:root:record: nmdc:882054466780d767f32534923f0e598b, Assembly Activity for nmdc:mga00yx311 +INFO:root:PassingDataObject: nmdc:a0c1413211c416c9e0bbe06c3cdbbf4c +INFO:root:PassingDataObject: nmdc:1d2fee55d925e1021234ae6e14cc4d9b +INFO:root:PassingDataObject: nmdc:58143aa3bdae270998ea70dc51dcba05 +INFO:root:PassingDataObject: nmdc:e4db6f9e965e844511d808747a434184 +INFO:root:PassingDataObject: nmdc:922918505ffe3ec0f02a12039feb9c90 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321272 +INFO:root:found 1 records +INFO:root:record: nmdc:882054466780d767f32534923f0e598b, Annotation Activity for nmdc:mga00yx311 +INFO:root:PassingDataObject: nmdc:05340f043a72d063810deea754c28227 +INFO:root:PassingDataObject: nmdc:f0407dcd970895ac878cd50059c9a0a0 +INFO:root:PassingDataObject: nmdc:2b3965007806666fa4d71d87405c52b5 +INFO:root:PassingDataObject: nmdc:9dfe905ee004293c6ab9b7161c3062fb +INFO:root:PassingDataObject: nmdc:6a3200a1f042d15a89dfb3e4301dacce +INFO:root:PassingDataObject: nmdc:cc14ba06504a827429db851b3bc17e52 +INFO:root:PassingDataObject: nmdc:b3f8e56f687a975e7419830b3d3a1594 +INFO:root:PassingDataObject: nmdc:6dd18c3c60903b3b4277a4edfa746419 +INFO:root:PassingDataObject: nmdc:3ad7568daa05c934d449a0bee7877f49 +INFO:root:PassingDataObject: nmdc:d102e15620b9e47b26c3ec9c24558c79 +INFO:root:PassingDataObject: nmdc:2b41bc37d126be7e098048a6852fbe49 +INFO:root:PassingDataObject: nmdc:880e55af1cf6c15305e14942960036b5 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321272 +INFO:root:found 1 records +INFO:root:record: nmdc:882054466780d767f32534923f0e598b, MAGs Analysis Activity for nmdc:mga00yx311 +INFO:root:PassingDataObject: nmdc:9937fdd842285d1f582ec695164f9784 +INFO:root:PassingDataObject: nmdc:6e05d94f5b66b62c8807713b6c401d80 +INFO:root:PassingDataObject: nmdc:f5a6c5795d552941489d2ddcd2e27be8 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:882054466780d767f32534923f0e598b +ERROR:root:FailedDataObject: nmdc:f8ce476a647f439c830ac0ffb39b8e1e, +ERROR:root:FailedDataObject: nmdc:c77008c86aa5dbeec0ad0127696d488c, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:882054466780d767f32534923f0e598b, MAGs Analysis Activity for nmdc:mga00yx311 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321272 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-keenj824 +INFO:root:legacy_id: gold:Gp0321297 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-keenj824 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87ce64d0b3516a5f4fb0 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321297 +INFO:root:found 1 records +INFO:root:record: nmdc:2e0118504a4a8a5f3b1ffcf90010acd3, Read QC Activity for nmdc:mga0sjqj53 +INFO:root:PassingDataObject: nmdc:aa5de59dac5e4d4ae34b404d684c6061 +INFO:root:PassingDataObject: nmdc:2765385b3e36cb006a570c43230ef424 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321297 +INFO:root:found 1 records +INFO:root:record: nmdc:2e0118504a4a8a5f3b1ffcf90010acd3, ReadBased Analysis Activity for nmdc:mga0sjqj53 +INFO:root:PassingDataObject: nmdc:5fe233e83aef43c8d744036a84df5bc5 +INFO:root:PassingDataObject: nmdc:738d650512ef7034c9a5344d22ae50a3 +INFO:root:PassingDataObject: nmdc:dc417684dddd7409929448da514302b3 +INFO:root:PassingDataObject: nmdc:f90a305886de117277c0535b81b3f0e1 +INFO:root:PassingDataObject: nmdc:5a19d6d17cc7e17520da5610eb85a852 +INFO:root:PassingDataObject: nmdc:de4b92b05885775dc8c52710a81381b3 +INFO:root:PassingDataObject: nmdc:e3b0278fe5f980c03ead17c0c3f383b7 +INFO:root:PassingDataObject: nmdc:675462f5a47b0b01cced16c4cf0f488f +INFO:root:PassingDataObject: nmdc:9fb0d1465d38dcbfa647b17b860ee24b +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321297 +INFO:root:found 1 records +INFO:root:record: nmdc:2e0118504a4a8a5f3b1ffcf90010acd3, Assembly Activity for nmdc:mga0sjqj53 +INFO:root:PassingDataObject: nmdc:bb05431da059d5afc35245a0dfa0bee8 +INFO:root:PassingDataObject: nmdc:f84210a0a991576d3f6590a7958fc0b5 +INFO:root:PassingDataObject: nmdc:1f36c33c12545e0946bf749eb39660d0 +INFO:root:PassingDataObject: nmdc:8d9bfcb2c90d135cd5fed99c0c6c41e0 +INFO:root:PassingDataObject: nmdc:e42099e3110b4348ca3ffc7fe5d779d6 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321297 +INFO:root:found 1 records +INFO:root:record: nmdc:2e0118504a4a8a5f3b1ffcf90010acd3, Annotation Activity for nmdc:mga0sjqj53 +INFO:root:PassingDataObject: nmdc:f3f205fbfe85af6f0f6edc3cfffef141 +INFO:root:PassingDataObject: nmdc:0b65f4b7566ddbfc5f04c923296203c3 +INFO:root:PassingDataObject: nmdc:a433c2fa7ca60bc8ce12fcd9ecdffefa +INFO:root:PassingDataObject: nmdc:13bc9df21458b0cc9594d3079b9229b1 +INFO:root:PassingDataObject: nmdc:e8e6e84cf351c7dc8a63215a4ef5beb8 +INFO:root:PassingDataObject: nmdc:bbac18cffce0470273415d92562225cc +INFO:root:PassingDataObject: nmdc:1c0430270a998f90c63dbb407008126d +INFO:root:PassingDataObject: nmdc:026e8a3388d1cface7132ae40f949280 +INFO:root:PassingDataObject: nmdc:c0f67640b9e946dcd26912952cef92b6 +INFO:root:PassingDataObject: nmdc:1e2cc3af2b155f90ad76f82e1e0005dc +INFO:root:PassingDataObject: nmdc:2165ca7c015a4146bce1d45ef109a9b7 +INFO:root:PassingDataObject: nmdc:7c93d61e31b74788ef7f08fe11a96d82 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321297 +INFO:root:found 1 records +INFO:root:record: nmdc:2e0118504a4a8a5f3b1ffcf90010acd3, MAGs Analysis Activity for nmdc:mga0sjqj53 +INFO:root:PassingDataObject: nmdc:48a3c432a55a85fedfa2c025f5fe1434 +INFO:root:PassingDataObject: nmdc:063772176d863c135ff40e609a8c5492 +INFO:root:PassingDataObject: nmdc:de88de9a4d8ce7242493c3c0229c50d9 +INFO:root:PassingDataObject: nmdc:ab1176618101c972726136430dfaac2b +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:2e0118504a4a8a5f3b1ffcf90010acd3 +ERROR:root:FailedDataObject: nmdc:3c42f0e15806328d4399f2072abc2d47, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2e0118504a4a8a5f3b1ffcf90010acd3, MAGs Analysis Activity for nmdc:mga0sjqj53 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321297 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-0t04n652 +INFO:root:legacy_id: gold:Gp0321301 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-0t04n652 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87e964d0b3516a5f4fb8 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321301 +INFO:root:found 1 records +INFO:root:record: nmdc:7d0ce07a66c5014b082272573e2f3916, Read QC Activity for nmdc:mga0r8rs47 +INFO:root:PassingDataObject: nmdc:9c7a946f604fe887ec7905c9b36b9913 +INFO:root:PassingDataObject: nmdc:315c0ab22dd71c0f78f87770d71eb965 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321301 +INFO:root:found 1 records +INFO:root:record: nmdc:7d0ce07a66c5014b082272573e2f3916, ReadBased Analysis Activity for nmdc:mga0r8rs47 +INFO:root:PassingDataObject: nmdc:64737f5b87f3fa93bf15ddb7efe04846 +INFO:root:PassingDataObject: nmdc:e00dedcdd76d1101cfd015d788d58e5a +INFO:root:PassingDataObject: nmdc:5bbee01099b522ce8cd790b2d5fc246b +INFO:root:PassingDataObject: nmdc:f993ec5d96b2f457eb4d46f3c663fef4 +INFO:root:PassingDataObject: nmdc:3e7b65da8c837474e94119109ad306ee +INFO:root:PassingDataObject: nmdc:5a0b755f1d0eabdc2c0a723799889925 +INFO:root:PassingDataObject: nmdc:3c8650b585f4d24a1eae000535155afb +INFO:root:PassingDataObject: nmdc:97cd1440a95259107b2cb905c7b5a978 +INFO:root:PassingDataObject: nmdc:c17e299a40e4a2da8f1d1045a9d941db +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321301 +INFO:root:found 1 records +INFO:root:record: nmdc:7d0ce07a66c5014b082272573e2f3916, Assembly Activity for nmdc:mga0r8rs47 +INFO:root:PassingDataObject: nmdc:13147cf4d9fadd24c1eb10fcb10afdbc +INFO:root:PassingDataObject: nmdc:e1e35b5c895dd5430963900e62303b01 +INFO:root:PassingDataObject: nmdc:ef48498d273398a1030698f0ebd3d442 +INFO:root:PassingDataObject: nmdc:4ac5cdc037548d27cb0f2b4c43814f4a +INFO:root:PassingDataObject: nmdc:90b6c3a34089fbc2dbfe056fcbcea0da +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321301 +INFO:root:found 1 records +INFO:root:record: nmdc:7d0ce07a66c5014b082272573e2f3916, Annotation Activity for nmdc:mga0r8rs47 +INFO:root:PassingDataObject: nmdc:591ad46a5d04eb022ed8d636669c4222 +INFO:root:PassingDataObject: nmdc:03d44b9d61de85976bdd81fdd6ca5119 +INFO:root:PassingDataObject: nmdc:4abe486631f3abe5d3ae8a2b8583dbc3 +INFO:root:PassingDataObject: nmdc:83b54aae75bc4e57e48bf6f65b1515e6 +INFO:root:PassingDataObject: nmdc:08e28e1b2d168bf126de50fefb369e8c +INFO:root:PassingDataObject: nmdc:827b49c06aea4596b0946d0f11df4e91 +INFO:root:PassingDataObject: nmdc:402e2631a3fcc700cf3222cf77560ce8 +INFO:root:PassingDataObject: nmdc:ad37af8e87edc2ec1245606f98a0c803 +INFO:root:PassingDataObject: nmdc:0899fad7d01361c6f8cca753187c17d8 +INFO:root:PassingDataObject: nmdc:0a8212b22d5a786bf817e53134f0e120 +INFO:root:PassingDataObject: nmdc:a8f1d39a90cf1f8403129587cd203eb7 +INFO:root:PassingDataObject: nmdc:9aeb59207e3faa41a0056c10f1a8fbe7 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321301 +INFO:root:found 1 records +INFO:root:record: nmdc:7d0ce07a66c5014b082272573e2f3916, MAGs Analysis Activity for nmdc:mga0r8rs47 +INFO:root:PassingDataObject: nmdc:e22998c78681393f858a6b925f0ae5c1 +INFO:root:PassingDataObject: nmdc:848ed6bcf273b2296f6f232cbe7117bb +INFO:root:PassingDataObject: nmdc:b6f16fd546beb87e95ded5b9693aa282 +INFO:root:PassingDataObject: nmdc:4aca5e328cc6edb08d3d03cc1f0b2093 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:7d0ce07a66c5014b082272573e2f3916 +ERROR:root:FailedDataObject: nmdc:898d7bed3ab9aff059bc276cb6c07831, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7d0ce07a66c5014b082272573e2f3916, MAGs Analysis Activity for nmdc:mga0r8rs47 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321301 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-9bvyt264 +INFO:root:legacy_id: gold:Gp0321296 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9bvyt264 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87c864d0b3516a5f4fae +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321296 +INFO:root:found 1 records +INFO:root:record: nmdc:bfccdfaf9ea4406c2ca88c34de7d9d17, Read QC Activity for nmdc:mga0zqhd61 +INFO:root:PassingDataObject: nmdc:4f72967f0d073120f33f1a2d1be20480 +INFO:root:PassingDataObject: nmdc:0e9979fd80ba797f2d8b2a5285954531 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321296 +INFO:root:found 1 records +INFO:root:record: nmdc:bfccdfaf9ea4406c2ca88c34de7d9d17, ReadBased Analysis Activity for nmdc:mga0zqhd61 +INFO:root:PassingDataObject: nmdc:066eac9f691a4834336c507c9c1a2e83 +INFO:root:PassingDataObject: nmdc:78f2dbbbdc09de1b40861c3235492f9a +INFO:root:PassingDataObject: nmdc:1f9e5ec20d049a6e19492c57791c3066 +INFO:root:PassingDataObject: nmdc:26872bb18a960245b0c170749e63dd5c +INFO:root:PassingDataObject: nmdc:2d7df0a1224df7863aa7cbaaf577e3ae +INFO:root:PassingDataObject: nmdc:d49f53a153801ca788fe37982a9e38d7 +INFO:root:PassingDataObject: nmdc:d3e544fc85629ef33bd05c4c2fe7e070 +INFO:root:PassingDataObject: nmdc:ee058616c3553df5fb42b094a6db044a +INFO:root:PassingDataObject: nmdc:d3a881fc2810136279586efc69ad9407 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321296 +INFO:root:found 1 records +INFO:root:record: nmdc:bfccdfaf9ea4406c2ca88c34de7d9d17, Assembly Activity for nmdc:mga0zqhd61 +INFO:root:PassingDataObject: nmdc:7542f1732b51a5ab42a73ef80124b96e +INFO:root:PassingDataObject: nmdc:f1b1be4fddfb9205d1769d25ec8691ec +INFO:root:PassingDataObject: nmdc:9948ba550000a37cf042fd726c40982f +INFO:root:PassingDataObject: nmdc:367a31413e9248dae917568b44c05224 +INFO:root:PassingDataObject: nmdc:35a2ba6abbe337753b511789213dd7e3 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321296 +INFO:root:found 1 records +INFO:root:record: nmdc:bfccdfaf9ea4406c2ca88c34de7d9d17, Annotation Activity for nmdc:mga0zqhd61 +INFO:root:PassingDataObject: nmdc:380fba5153050e651476a8a8f9f283aa +INFO:root:PassingDataObject: nmdc:cc2b5c74db3653849a7b27e11abb571c +INFO:root:PassingDataObject: nmdc:05b35adef1c7a0ef63980823277d2b2d +INFO:root:PassingDataObject: nmdc:768a4b835495d00f4f7e0610b1190751 +INFO:root:PassingDataObject: nmdc:24d75ee08bff9300ed59c03bae200ce1 +INFO:root:PassingDataObject: nmdc:37e9ae1f2282e49dd0ad67edaa3f0fe1 +INFO:root:PassingDataObject: nmdc:496c996fe42d6fb8d4d53a431462bdbb +INFO:root:PassingDataObject: nmdc:8cfefcd0af58efbc664ea44769859747 +INFO:root:PassingDataObject: nmdc:ae9655120fc5ccc9b98d7f669742de20 +INFO:root:PassingDataObject: nmdc:6337b9f35e32c013d188984b023bca82 +INFO:root:PassingDataObject: nmdc:b97c3dc07ab77b45c2e77c29772a4dbc +INFO:root:PassingDataObject: nmdc:02d146394c0d3fe8d2847c8200d4193a +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321296 +INFO:root:found 1 records +INFO:root:record: nmdc:bfccdfaf9ea4406c2ca88c34de7d9d17, MAGs Analysis Activity for nmdc:mga0zqhd61 +INFO:root:PassingDataObject: nmdc:4a002cf190775aaaf95dd079d5d33210 +INFO:root:PassingDataObject: nmdc:e4c0213a08ad3655417f41231fdff363 +INFO:root:PassingDataObject: nmdc:bdac77f5778ebf7ca9fa4c0e3a1fd6d4 +INFO:root:PassingDataObject: nmdc:d0ff40db26477624892c57a9045d6b59 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:bfccdfaf9ea4406c2ca88c34de7d9d17 +ERROR:root:FailedDataObject: nmdc:0c84da0b91ee5d90343e6c1b012b2783, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bfccdfaf9ea4406c2ca88c34de7d9d17, MAGs Analysis Activity for nmdc:mga0zqhd61 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321296 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-q17x6w88 +INFO:root:legacy_id: gold:Gp0321298 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-q17x6w88 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87d564d0b3516a5f4fb2 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321298 +INFO:root:found 1 records +INFO:root:record: nmdc:a10b9b9e42d2a8510eb23f1a813b3411, Read QC Activity for nmdc:mga0zfd907 +INFO:root:PassingDataObject: nmdc:bde363304a610489ba1b3c4cadcd2b8a +INFO:root:PassingDataObject: nmdc:cd5fb82f4c628f27c60dfb3f72547eb5 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321298 +INFO:root:found 1 records +INFO:root:record: nmdc:a10b9b9e42d2a8510eb23f1a813b3411, ReadBased Analysis Activity for nmdc:mga0zfd907 +INFO:root:PassingDataObject: nmdc:78496384b2453cccf13ba578074c1b07 +INFO:root:PassingDataObject: nmdc:ce75d556e0ebc55bbd898a738f173de5 +INFO:root:PassingDataObject: nmdc:f32d6fcb6ed9e74072defd64894341c8 +INFO:root:PassingDataObject: nmdc:c7a6cc4cd4c145206ecff43aa20ea94c +INFO:root:PassingDataObject: nmdc:6dc7fdb6fe37ca500f872f514413316c +INFO:root:PassingDataObject: nmdc:dd6bb76f141c8ed336c15935b070f8f6 +INFO:root:PassingDataObject: nmdc:605264ada400223732abb42f917d28f4 +INFO:root:PassingDataObject: nmdc:96f26b3ece86aae67d2a03f8f950630a +INFO:root:PassingDataObject: nmdc:ddae851827e48c9c881f9d3bbc5c0147 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321298 +INFO:root:found 1 records +INFO:root:record: nmdc:a10b9b9e42d2a8510eb23f1a813b3411, Assembly Activity for nmdc:mga0zfd907 +INFO:root:PassingDataObject: nmdc:e3aece778fb5b2fb200aed2c300b81f1 +INFO:root:PassingDataObject: nmdc:897e36a4d60af112502840e058e41abe +INFO:root:PassingDataObject: nmdc:87a83c6496b32c9c09c88b0bf2323203 +INFO:root:PassingDataObject: nmdc:5c123914f4a1bbdd69643e9337b5d525 +INFO:root:PassingDataObject: nmdc:e0f6bd3ef0fd5aabcd272dc68a14cbb5 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321298 +INFO:root:found 1 records +INFO:root:record: nmdc:a10b9b9e42d2a8510eb23f1a813b3411, Annotation Activity for nmdc:mga0zfd907 +INFO:root:PassingDataObject: nmdc:ed416a46ff5e7b6834f12eebdb89336f +INFO:root:PassingDataObject: nmdc:4c0ee11ac3ee674109ab48404e8fa893 +INFO:root:PassingDataObject: nmdc:aef514f7844eb2796f7108f7a7e1d35a +INFO:root:PassingDataObject: nmdc:f953a47768cfd07deefabbd9b3bf1907 +INFO:root:PassingDataObject: nmdc:c6f8ad5fc38524d9f6202122eaa8dfff +INFO:root:PassingDataObject: nmdc:038e25ebd5465c755f6e17df24ec407b +INFO:root:PassingDataObject: nmdc:142b3706418f7d479ba7fa5bb9bd82b4 +INFO:root:PassingDataObject: nmdc:585aa34ed97d075302cfe8ad526cf739 +INFO:root:PassingDataObject: nmdc:4d879ef6d2b375cd6e0ae28a177e0315 +INFO:root:PassingDataObject: nmdc:066472d57230c56b37e2554ba545bfad +INFO:root:PassingDataObject: nmdc:c7c9b254780bb054a1f80f0077f49d2d +INFO:root:PassingDataObject: nmdc:b2c3ec02390b7b4e6918e80c46638d06 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321298 +INFO:root:found 1 records +INFO:root:record: nmdc:a10b9b9e42d2a8510eb23f1a813b3411, MAGs Analysis Activity for nmdc:mga0zfd907 +INFO:root:PassingDataObject: nmdc:cffcc9abadf279d58e66a0187a70a3a3 +INFO:root:PassingDataObject: nmdc:ebe0e8f02c5b55d80359c750f98f4775 +INFO:root:PassingDataObject: nmdc:6e1c215b00689271342662b05c6ae896 +INFO:root:PassingDataObject: nmdc:24fc8d8ed9c33f94717802247d694f83 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:a10b9b9e42d2a8510eb23f1a813b3411 +ERROR:root:FailedDataObject: nmdc:81e52ea39b2381ea8b24b1fd0323f629, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:a10b9b9e42d2a8510eb23f1a813b3411, MAGs Analysis Activity for nmdc:mga0zfd907 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321298 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-09vha881 +INFO:root:legacy_id: gold:Gp0321303 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-09vha881 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87f464d0b3516a5f4fbb +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321303 +INFO:root:found 1 records +INFO:root:record: nmdc:fab16be0d832a30e82eec1d822330507, Read QC Activity for nmdc:mga08kx682 +INFO:root:PassingDataObject: nmdc:f8d6bc052b33a65aacea0586c73bc8d3 +INFO:root:PassingDataObject: nmdc:d7721bcedefdc31b34a23aa450ce6fbd +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321303 +INFO:root:found 1 records +INFO:root:record: nmdc:fab16be0d832a30e82eec1d822330507, ReadBased Analysis Activity for nmdc:mga08kx682 +INFO:root:PassingDataObject: nmdc:59791c9992f5580d827216936c8e58b5 +INFO:root:PassingDataObject: nmdc:d55a47adcec03ae22f1346ac5d623092 +INFO:root:PassingDataObject: nmdc:346f49e2ae1926b55640fb0f32178e8b +INFO:root:PassingDataObject: nmdc:8a1f269f56a920c1dbd4fe57c702831f +INFO:root:PassingDataObject: nmdc:e0e03fa7c99c10eda7ad07d0aad03245 +INFO:root:PassingDataObject: nmdc:9a082b9deadebb8c5b0aabcfb96d62fc +INFO:root:PassingDataObject: nmdc:4d0ad031d3f083bcb1edc987fbeba5ff +INFO:root:PassingDataObject: nmdc:2119c38c38069cf853fc8a354b11c68a +INFO:root:PassingDataObject: nmdc:3dc4c4f0930c1d9b1bdb55f732efd65e +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321303 +INFO:root:found 1 records +INFO:root:record: nmdc:fab16be0d832a30e82eec1d822330507, Assembly Activity for nmdc:mga08kx682 +INFO:root:PassingDataObject: nmdc:45f0338d4157326b2c314f2894e42a51 +INFO:root:PassingDataObject: nmdc:5f81381fdbc26c3303c5493f07374d93 +INFO:root:PassingDataObject: nmdc:729963faeed235806bab1359cdcc1e62 +INFO:root:PassingDataObject: nmdc:3ea6464eab8d30d88bed60d7b61923d3 +INFO:root:PassingDataObject: nmdc:94e554d3299cfe1f8083afaf6d06de4c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321303 +INFO:root:found 1 records +INFO:root:record: nmdc:fab16be0d832a30e82eec1d822330507, Annotation Activity for nmdc:mga08kx682 +INFO:root:PassingDataObject: nmdc:fa5c23ee5622092f1b45c7b644b91a08 +INFO:root:PassingDataObject: nmdc:93a015bc171c31ab4e91fb1ddc5e0c85 +INFO:root:PassingDataObject: nmdc:fbbb4e05ac981bf80e47515d333aecb1 +INFO:root:PassingDataObject: nmdc:b0d54a3e0970df24844b06a8ca5997c1 +INFO:root:PassingDataObject: nmdc:fc63adae55620361a468efbad6f8b037 +INFO:root:PassingDataObject: nmdc:8728a74171b6d1b08726f376dc25dbe9 +INFO:root:PassingDataObject: nmdc:1346fbccff43840981b3e060a174c0bc +INFO:root:PassingDataObject: nmdc:c792318357d1352f789bee73363f2f20 +INFO:root:PassingDataObject: nmdc:34aef3d5f9482eda04234a91c09dec13 +INFO:root:PassingDataObject: nmdc:e45ea1249bfca6326a75dfd03b1be9e0 +INFO:root:PassingDataObject: nmdc:014e6d31ea066576968b62cdb2c12783 +INFO:root:PassingDataObject: nmdc:67f30b3319406c999e68947bf6bb5366 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321303 +INFO:root:found 1 records +INFO:root:record: nmdc:fab16be0d832a30e82eec1d822330507, MAGs Analysis Activity for nmdc:mga08kx682 +INFO:root:PassingDataObject: nmdc:700fd7053e8cd61dda2297436188d53f +INFO:root:PassingDataObject: nmdc:d9cc4aa73d3ec0734fd435d6d214f1f6 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321303 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-yp178c35 +INFO:root:legacy_id: gold:Gp0321302 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-yp178c35 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87ef64d0b3516a5f4fba +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321302 +INFO:root:found 1 records +INFO:root:record: nmdc:52befc9a6ede621ad9134d09e2c51be5, Read QC Activity for nmdc:mga0rjtf11 +INFO:root:PassingDataObject: nmdc:00980ec0a65c67b1958a0f375b1d1e21 +INFO:root:PassingDataObject: nmdc:560218b92247b7f705aa20e6d99546ef +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321302 +INFO:root:found 1 records +INFO:root:record: nmdc:52befc9a6ede621ad9134d09e2c51be5, ReadBased Analysis Activity for nmdc:mga0rjtf11 +INFO:root:PassingDataObject: nmdc:a0df53a6bf6e6c260e02514f0e8f5a3a +INFO:root:PassingDataObject: nmdc:5c8c3fbaef715b535fb0bc2d9d31d263 +INFO:root:PassingDataObject: nmdc:e7a7841f9c1fc5e8e13e838bf7293daa +INFO:root:PassingDataObject: nmdc:1945e70150c16ba746cf158e0ea8f25a +INFO:root:PassingDataObject: nmdc:32ed53912f10592902adbf9b2e4a79e7 +INFO:root:PassingDataObject: nmdc:09e771f86dfe22003dcbae30519aecdc +INFO:root:PassingDataObject: nmdc:2aea1394e661f21860e35c0781a9b1b9 +INFO:root:PassingDataObject: nmdc:85588072bf0a00f4fe81b0d6f379357e +INFO:root:PassingDataObject: nmdc:85cda98b61fa57f4c8456a80847b07aa +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321302 +INFO:root:found 1 records +INFO:root:record: nmdc:52befc9a6ede621ad9134d09e2c51be5, Assembly Activity for nmdc:mga0rjtf11 +INFO:root:PassingDataObject: nmdc:723b0dc7fc99e7b676a6cb4d5b1a33a7 +INFO:root:PassingDataObject: nmdc:eb4806155d767bba66bb2fbf4bc6680f +INFO:root:PassingDataObject: nmdc:2e8a133d40ccfbb988ffa5d70d231e6e +INFO:root:PassingDataObject: nmdc:324184891203953d1b761e5e86a04439 +INFO:root:PassingDataObject: nmdc:0e1ccb18f7cbb3bd66e750ac3c12a4bc +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321302 +INFO:root:found 1 records +INFO:root:record: nmdc:52befc9a6ede621ad9134d09e2c51be5, Annotation Activity for nmdc:mga0rjtf11 +INFO:root:PassingDataObject: nmdc:0db8d74b87f95c924a2f46727c984656 +INFO:root:PassingDataObject: nmdc:361c98aaf9ead800ee93e7acfcf76ab4 +INFO:root:PassingDataObject: nmdc:208d516bc4d64d953aa028c78afb1c7a +INFO:root:PassingDataObject: nmdc:64be523dcaf9d0892f3a5ed5488c152d +INFO:root:PassingDataObject: nmdc:7f57232e179f1e431bf5d15818315535 +INFO:root:PassingDataObject: nmdc:76bbdbaa59a1887fdeecd3bd05a71cad +INFO:root:PassingDataObject: nmdc:de38722d799e14bb7a335fdfe1e8e878 +INFO:root:PassingDataObject: nmdc:be95556afc42f24d149eb1ba1b7c41ac +INFO:root:PassingDataObject: nmdc:8802248c2586fbb18bfb4386b23950f6 +INFO:root:PassingDataObject: nmdc:30f498d1a363b042145d8866b26caf93 +INFO:root:PassingDataObject: nmdc:4d9f6d404eee7be6beac46874ce1c3c0 +INFO:root:PassingDataObject: nmdc:8a5da363f31f7ab2f36a5307d0f8b2be +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321302 +INFO:root:found 1 records +INFO:root:record: nmdc:52befc9a6ede621ad9134d09e2c51be5, MAGs Analysis Activity for nmdc:mga0rjtf11 +INFO:root:PassingDataObject: nmdc:acbb71507785d6162b6a32d278497f4d +INFO:root:PassingDataObject: nmdc:74884e6a3078a5089cb644ed2ce2a1f8 +INFO:root:PassingDataObject: nmdc:8358522b00afe400ac1241530fda0f03 +INFO:root:PassingDataObject: nmdc:0b2e835d47f250d5c739634d99741f69 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:52befc9a6ede621ad9134d09e2c51be5 +ERROR:root:FailedDataObject: nmdc:9426f499d605e1c39bcdca9167fcecb6, +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:52befc9a6ede621ad9134d09e2c51be5, MAGs Analysis Activity for nmdc:mga0rjtf11 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321302 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-9jw2cy65 +INFO:root:legacy_id: gold:Gp0321305 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9jw2cy65 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b880264d0b3516a5f4fc0 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321305 +INFO:root:found 1 records +INFO:root:record: nmdc:d42cfd254896d482d2e3f38ded28fbbf, Read QC Activity for nmdc:mga076j492 +INFO:root:PassingDataObject: nmdc:bcb7757bc3799bc678c4783981fa786a +INFO:root:PassingDataObject: nmdc:bcb807a9994c453654f505dbc583e580 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321305 +INFO:root:found 1 records +INFO:root:record: nmdc:d42cfd254896d482d2e3f38ded28fbbf, ReadBased Analysis Activity for nmdc:mga076j492 +INFO:root:PassingDataObject: nmdc:2506551e9e3bface93d0d7139a6c9f48 +INFO:root:PassingDataObject: nmdc:4ee4d74870dad7bef3210cc9a159e0c4 +INFO:root:PassingDataObject: nmdc:b9cf37662d0278e2ef419475a51b5f34 +INFO:root:PassingDataObject: nmdc:0bd5dbcc2984a8e3fefdbb8745017f78 +INFO:root:PassingDataObject: nmdc:84a544dd58055b997210f6087c8bb18d +INFO:root:PassingDataObject: nmdc:47ce18d1684a11aaa57a4e884872b41e +INFO:root:PassingDataObject: nmdc:a19f7f7321ef1855deb4f5e0b85a1f0b +INFO:root:PassingDataObject: nmdc:fa665c82eb81d62b3095acd2ff4a5bd3 +INFO:root:PassingDataObject: nmdc:6d74da85a7f7ecc7f75a8826e62ba815 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321305 +INFO:root:found 1 records +INFO:root:record: nmdc:d42cfd254896d482d2e3f38ded28fbbf, Assembly Activity for nmdc:mga076j492 +INFO:root:PassingDataObject: nmdc:abc4e801db5eb153ea611c79c6714f8f +INFO:root:PassingDataObject: nmdc:63ae76c4baca3231aae7a9948995bc03 +INFO:root:PassingDataObject: nmdc:11cbb49f14c3c9b26894e7555fc0a800 +INFO:root:PassingDataObject: nmdc:a808f73b836ab7b758363161ab122419 +INFO:root:PassingDataObject: nmdc:be6df318769d3bf9fa548d3af3c04317 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321305 +INFO:root:found 1 records +INFO:root:record: nmdc:d42cfd254896d482d2e3f38ded28fbbf, Annotation Activity for nmdc:mga076j492 +INFO:root:PassingDataObject: nmdc:45fc6ae3819e21dbaebb865f19ef0397 +INFO:root:PassingDataObject: nmdc:8f4a18424e955513c7de1cacd47610e0 +INFO:root:PassingDataObject: nmdc:503a938711e209870eee54d80bdc8071 +INFO:root:PassingDataObject: nmdc:ae2aee284b1e8fa24eb212536c92a6bc +INFO:root:PassingDataObject: nmdc:c72b7fed71b2b23403c219c01114ee79 +INFO:root:PassingDataObject: nmdc:a630dcb86f36414bc1aa26159f8cc64d +INFO:root:PassingDataObject: nmdc:b312439cab437bd4c46d587725234804 +INFO:root:PassingDataObject: nmdc:1af3384923d1db590bd718b2cf7ff73a +INFO:root:PassingDataObject: nmdc:63265a1efab8985ef5e3368957929e9b +INFO:root:PassingDataObject: nmdc:2b16af69bf02f66286764463b7f4c71a +INFO:root:PassingDataObject: nmdc:b6ffabeebd4a4f77e8f55a41b31b22bd +INFO:root:PassingDataObject: nmdc:c016b8ab34178077bdd4e2c4987e1e7e +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321305 +INFO:root:found 1 records +INFO:root:record: nmdc:d42cfd254896d482d2e3f38ded28fbbf, MAGs Analysis Activity for nmdc:mga076j492 +INFO:root:PassingDataObject: nmdc:fbfa50ce07f7024a673a0994e6937ae1 +INFO:root:PassingDataObject: nmdc:911e99ee33debe970b8aba9cdfe1d6bc +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321305 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-zaxsm356 +INFO:root:legacy_id: gold:Gp0321307 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-zaxsm356 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b881064d0b3516a5f4fc8 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321307 +INFO:root:found 1 records +INFO:root:record: nmdc:0413a8d75657c3b560e9366414b0c4ff, Read QC Activity for nmdc:mga0v5kb53 +INFO:root:PassingDataObject: nmdc:5b50eb12ade75e8808034365f176a897 +INFO:root:PassingDataObject: nmdc:634714bba73881fd251c9d7748bc6276 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321307 +INFO:root:found 1 records +INFO:root:record: nmdc:0413a8d75657c3b560e9366414b0c4ff, ReadBased Analysis Activity for nmdc:mga0v5kb53 +INFO:root:PassingDataObject: nmdc:c1afa96f0d8910a8b0f8db7a75d4b88f +INFO:root:PassingDataObject: nmdc:82bc6f3a4917e8faa32902fe66688858 +INFO:root:PassingDataObject: nmdc:62eb2cc638f66a3d425092d332e259eb +INFO:root:PassingDataObject: nmdc:574a73f61937bf4aa0e89afe6833bf39 +INFO:root:PassingDataObject: nmdc:b7b29c648599a1e7e93ab88bb7ccdfdd +INFO:root:PassingDataObject: nmdc:3ed73cab0fc3a3bb52c485a9dd3ecc91 +INFO:root:PassingDataObject: nmdc:a61309a8f493e148724ae61437be074c +INFO:root:PassingDataObject: nmdc:c0cc759108fd03c082b286ee028c2926 +INFO:root:PassingDataObject: nmdc:5dc96d3529d375efec94ce25d188af6f +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321307 +INFO:root:found 1 records +INFO:root:record: nmdc:0413a8d75657c3b560e9366414b0c4ff, Assembly Activity for nmdc:mga0v5kb53 +INFO:root:PassingDataObject: nmdc:c09583c81d172d8c0c66eb0620c6ff0b +INFO:root:PassingDataObject: nmdc:39bbbd727cb4f0f482ce781b600b1200 +INFO:root:PassingDataObject: nmdc:03c9616ec2c6bacd4f8d145b68d8c963 +INFO:root:PassingDataObject: nmdc:b1dbcfe9f989d350e93cc5159784abf1 +INFO:root:PassingDataObject: nmdc:eaaed48092071825b1c81b62eff59cb1 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321307 +INFO:root:found 1 records +INFO:root:record: nmdc:0413a8d75657c3b560e9366414b0c4ff, Annotation Activity for nmdc:mga0v5kb53 +INFO:root:PassingDataObject: nmdc:be68bec9551b47cb5c5e6d540f04caf7 +INFO:root:PassingDataObject: nmdc:60ebb41d1fef4fc6e8015bf84b33d8dc +INFO:root:PassingDataObject: nmdc:fbd10b6a8ef9e0312c61773e81e86df9 +INFO:root:PassingDataObject: nmdc:5baba909d0721196d8eed5db6372916a +INFO:root:PassingDataObject: nmdc:ce94f16deac49f3b9750229968d77f0e +INFO:root:PassingDataObject: nmdc:cfc3d34f3aba60667a4289d42ed67665 +INFO:root:PassingDataObject: nmdc:9ad4625eb43a17e4ee58b550bcecd1a5 +INFO:root:PassingDataObject: nmdc:0669db479ee6eb664578fabd7bfef784 +INFO:root:PassingDataObject: nmdc:5534619f5db851167fc7f3462fa31efc +INFO:root:PassingDataObject: nmdc:12cc77b466ccff5ff30de323a7ea92c3 +INFO:root:PassingDataObject: nmdc:f8b1985537d1581f25718adde49b3118 +INFO:root:PassingDataObject: nmdc:60a2ecf869504c85ec202ff55511f05f +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321307 +INFO:root:found 1 records +INFO:root:record: nmdc:0413a8d75657c3b560e9366414b0c4ff, MAGs Analysis Activity for nmdc:mga0v5kb53 +INFO:root:PassingDataObject: nmdc:cd6ce1b68833913596a1faec6101ab39 +INFO:root:PassingDataObject: nmdc:9b40a534074358982bc2bbdbf313fbe3 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321307 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-ht6zfn30 +INFO:root:legacy_id: gold:Gp0321309 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-ht6zfn30 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b881c64d0b3516a5f4fcd +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321309 +INFO:root:found 1 records +INFO:root:record: nmdc:8751b0c2d69286b3c0999de98659702b, Read QC Activity for nmdc:mga0r3w742 +INFO:root:PassingDataObject: nmdc:c08fe81476b67614924c7fd170b257d8 +INFO:root:PassingDataObject: nmdc:294d235e6ea64fe8e1488cbb258f1750 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321309 +INFO:root:found 1 records +INFO:root:record: nmdc:42e77a8c00af42b03349a2ed4b26a3e2, ReadBased Analysis Activity for nmdc:mga0r3w742 +INFO:root:PassingDataObject: nmdc:ae7d7d2e2996f218b4a445b7637cc52d +INFO:root:PassingDataObject: nmdc:4d0788b7eeecb26b0e5a4f15d2ec460c +INFO:root:PassingDataObject: nmdc:141cf0b3528f27d6f888723548ad6473 +INFO:root:PassingDataObject: nmdc:5a0d2d965d619385c389defc26792134 +INFO:root:PassingDataObject: nmdc:a49049d8c4d9e3d1a8b2dd02beeffce7 +INFO:root:PassingDataObject: nmdc:692f07cb67230174326ff2db9d3175d4 +INFO:root:PassingDataObject: nmdc:3b567185b87e59c4c4bff9de58f18f72 +INFO:root:PassingDataObject: nmdc:ed11cf5a72cd38d2e7d7f520257589a3 +INFO:root:PassingDataObject: nmdc:293c0f5e7dc7a0cdbe8eed1cae21d67a +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321309 +INFO:root:found 1 records +INFO:root:record: nmdc:42e77a8c00af42b03349a2ed4b26a3e2, Assembly Activity for nmdc:mga0r3w742 +INFO:root:PassingDataObject: nmdc:fd6c21b21063a208d19fba19be2fb54c +INFO:root:PassingDataObject: nmdc:ed52399126034f33f24af0e68b49749f +INFO:root:PassingDataObject: nmdc:c92cd3fe38b671c5c6def5dce8134c2f +INFO:root:PassingDataObject: nmdc:2dfcc8c80afd39e9d4edf12a1ca2c955 +INFO:root:PassingDataObject: nmdc:d6b2b5aba37c6454eb755c9669be8ba0 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321309 +INFO:root:found 1 records +INFO:root:record: nmdc:42e77a8c00af42b03349a2ed4b26a3e2, Annotation Activity for nmdc:mga0r3w742 +INFO:root:PassingDataObject: nmdc:20362b52f203a876e564e83e99a34f5d +INFO:root:PassingDataObject: nmdc:45ea2bfc3478b662ccb160c98679cd9f +INFO:root:PassingDataObject: nmdc:c5ac5844a21b458bc8810bba85c34c35 +INFO:root:PassingDataObject: nmdc:4d49c3614b5b37bd70f6d00698dc8f05 +INFO:root:PassingDataObject: nmdc:24a8ecaeadd4fd7fbc3f4364c6630eae +INFO:root:PassingDataObject: nmdc:b76539ed3a6eaceac5b53c7e5523cfa1 +INFO:root:PassingDataObject: nmdc:8cbf88bb1e4de3ec5f477ba183d531d9 +INFO:root:PassingDataObject: nmdc:5e4ab142b63ae099fd5ce255aef2d291 +INFO:root:PassingDataObject: nmdc:8d82e753ff953314704a825cf0405fe9 +INFO:root:PassingDataObject: nmdc:a19207ecd158ab1395560db3c6731dcd +INFO:root:PassingDataObject: nmdc:91f4f1fbb3338b69ef8c8aae39a7f536 +INFO:root:PassingDataObject: nmdc:ff8a21c2899cc728561dd8c64786c7d2 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321309 +INFO:root:found 1 records +INFO:root:record: nmdc:42e77a8c00af42b03349a2ed4b26a3e2, MAGs Analysis Activity for nmdc:mga0r3w742 +INFO:root:PassingDataObject: nmdc:51b0ae1ffbf4ca084d99b64481124507 +INFO:root:PassingDataObject: nmdc:b256da833778f8f077215c08566a806a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321309 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-szqrn945 +INFO:root:legacy_id: gold:Gp0321308 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-szqrn945 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b881464d0b3516a5f4fca +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321308 +INFO:root:found 1 records +INFO:root:record: nmdc:397d09d100dd3e38fe0a720510d8eb8b, Read QC Activity for nmdc:mga021f738 +INFO:root:PassingDataObject: nmdc:4ebf10c034e4970965f53673be1ef13a +INFO:root:PassingDataObject: nmdc:d0e91ab3f95dc52be37c14bf2f73b282 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321308 +INFO:root:found 1 records +INFO:root:record: nmdc:397d09d100dd3e38fe0a720510d8eb8b, ReadBased Analysis Activity for nmdc:mga021f738 +INFO:root:PassingDataObject: nmdc:ad1a29bda7d865052db0ab1c5aa2e1ba +INFO:root:PassingDataObject: nmdc:0718b7ea86ca78d74d41159f475380fb +INFO:root:PassingDataObject: nmdc:1600304180cf40ff95c93387f77966ff +INFO:root:PassingDataObject: nmdc:82ce3584ca0df0b64c53f50876c40cba +INFO:root:PassingDataObject: nmdc:f575af3569c208cb96abe4bce2378c23 +INFO:root:PassingDataObject: nmdc:285e3a2e70983994a1cd0a2ec47b7707 +INFO:root:PassingDataObject: nmdc:eb6bfd132b304a71a9f852d8edd9f683 +INFO:root:PassingDataObject: nmdc:0bedd840cf400d57fe64bae8e2ddd192 +INFO:root:PassingDataObject: nmdc:b9dfc0761eb0327df911f758a2583e6a +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321308 +INFO:root:found 1 records +INFO:root:record: nmdc:397d09d100dd3e38fe0a720510d8eb8b, Assembly Activity for nmdc:mga021f738 +INFO:root:PassingDataObject: nmdc:f529a0a19d40a3500f8ccfa13a5b6863 +INFO:root:PassingDataObject: nmdc:21245d5b7412ef210af4b726b360cf86 +INFO:root:PassingDataObject: nmdc:99b4f0437207ace27d14eeff8dfd62d9 +INFO:root:PassingDataObject: nmdc:82c881c95713de383b4c4b005e7b8025 +INFO:root:PassingDataObject: nmdc:da5b53547ff05b65d78a4450c8003054 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321308 +INFO:root:found 1 records +INFO:root:record: nmdc:397d09d100dd3e38fe0a720510d8eb8b, Annotation Activity for nmdc:mga021f738 +INFO:root:PassingDataObject: nmdc:61c0e1bf2a8f06d3a361c39cf497a2fb +INFO:root:PassingDataObject: nmdc:a564f4e2a621b7068a78f69b850f8ebb +INFO:root:PassingDataObject: nmdc:afede9c584ce6118de48776cfd63621a +INFO:root:PassingDataObject: nmdc:806324ea4e59f012a6df6e0fb85aa096 +INFO:root:PassingDataObject: nmdc:067af72e6059d9f0dec77fa53a251c76 +INFO:root:PassingDataObject: nmdc:945a64f78b939b755d1cd676e7a7e248 +INFO:root:PassingDataObject: nmdc:c7071be41166f1c4d2b1af1007439fa4 +INFO:root:PassingDataObject: nmdc:06fca851cbbcea53ef195f63a92fd4ff +INFO:root:PassingDataObject: nmdc:34c0c4046973c8476012cb3e10785624 +INFO:root:PassingDataObject: nmdc:b86b6aba14c7f4504050a33e80f4d074 +INFO:root:PassingDataObject: nmdc:a7baf3682d8c94368ba0c5a3744a1088 +INFO:root:PassingDataObject: nmdc:b957d84eca98ba29ea81648265d3bf91 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321308 +INFO:root:found 1 records +INFO:root:record: nmdc:397d09d100dd3e38fe0a720510d8eb8b, MAGs Analysis Activity for nmdc:mga021f738 +INFO:root:PassingDataObject: nmdc:03dc38f432e460d2abb85dcb2aedc351 +INFO:root:PassingDataObject: nmdc:ba024dc0ddfecedfbe54cde4918a33db +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321308 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-tzzm8x88 +INFO:root:legacy_id: gold:Gp0321310 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-tzzm8x88 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b882364d0b3516a5f4fcf +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321310 +INFO:root:found 1 records +INFO:root:record: nmdc:68c39762175f1aff3269fcb52d09fd8d, Read QC Activity for nmdc:mga06gxg42 +INFO:root:PassingDataObject: nmdc:2f44939cfa6bf4a2854e023c50984d8b +INFO:root:PassingDataObject: nmdc:82388575727f7ce124ecbb6e94633234 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321310 +INFO:root:found 1 records +INFO:root:record: nmdc:68c39762175f1aff3269fcb52d09fd8d, ReadBased Analysis Activity for nmdc:mga06gxg42 +INFO:root:PassingDataObject: nmdc:e2caceed097bec36e6cae16b99b24bb0 +INFO:root:PassingDataObject: nmdc:5f7711ebf9b34b25e0dba8298e0daef7 +INFO:root:PassingDataObject: nmdc:2a59b6efe8ccae45b12ec83237f0292d +INFO:root:PassingDataObject: nmdc:3e6970fbb5d7f6689fba85d373bd425e +INFO:root:PassingDataObject: nmdc:840bc93374184189b81a34b3b6cdb7d3 +INFO:root:PassingDataObject: nmdc:d5882eb0d40823ebecdad09c07216896 +INFO:root:PassingDataObject: nmdc:63023feaecb62f235c2b3b47dc7d7c30 +INFO:root:PassingDataObject: nmdc:2fcf8f0985038b2dd2bb0158c05ba756 +INFO:root:PassingDataObject: nmdc:5378aac69d81a797372254933c975ad5 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321310 +INFO:root:found 1 records +INFO:root:record: nmdc:68c39762175f1aff3269fcb52d09fd8d, Assembly Activity for nmdc:mga06gxg42 +INFO:root:PassingDataObject: nmdc:aa54def849ccdb5b442d07ecb787a70c +INFO:root:PassingDataObject: nmdc:60a1b2a517cc840dd0c04bf5648a6e79 +INFO:root:PassingDataObject: nmdc:4ae7a63077c1a43e8937b90be03c9c1d +INFO:root:PassingDataObject: nmdc:5d810b44750d58f5ab4d910d68e7a345 +INFO:root:PassingDataObject: nmdc:cb01b760520d0827441f93e9360a22c3 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321310 +INFO:root:found 1 records +INFO:root:record: nmdc:68c39762175f1aff3269fcb52d09fd8d, Annotation Activity for nmdc:mga06gxg42 +INFO:root:PassingDataObject: nmdc:3dbfba58f418a7fb3000ce32055f625f +INFO:root:PassingDataObject: nmdc:ce63b033581e6ee1a40d2f380b6fed03 +INFO:root:PassingDataObject: nmdc:d32978b56ad77970c4505d2f0324a182 +INFO:root:PassingDataObject: nmdc:3f9339141d3ada2639b4c2d2b728df48 +INFO:root:PassingDataObject: nmdc:26dfc65e1cf549bb90e2efff63e81459 +INFO:root:PassingDataObject: nmdc:97878500a880a2a7b53f13169cdd2dea +INFO:root:PassingDataObject: nmdc:19cf6659fc8389c2e10cf26b4bd0f766 +INFO:root:PassingDataObject: nmdc:7cb84ad85145eecdde5090a78678de99 +INFO:root:PassingDataObject: nmdc:8a7fb31c8642ce79b8b4316719c53458 +INFO:root:PassingDataObject: nmdc:ae5d1412701ccbcd8af9747ea0d89efb +INFO:root:PassingDataObject: nmdc:fa6db41f19c97013df2918410d9d59a5 +INFO:root:PassingDataObject: nmdc:d09fb81ab24a5e01ef2c3f80610be717 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321310 +INFO:root:found 1 records +INFO:root:record: nmdc:68c39762175f1aff3269fcb52d09fd8d, MAGs Analysis Activity for nmdc:mga06gxg42 +INFO:root:PassingDataObject: nmdc:4917c6555015c2364c4f92d2f1981905 +INFO:root:PassingDataObject: nmdc:496d12120d8be19d352e294105c02179 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321310 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-7hs0fa05 +INFO:root:legacy_id: gold:Gp0324008 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-7hs0fa05 +INFO:root:Adding OmicsProcessing Metagenome Raw Reads has_output DataObject:jgi:5b6f8b6a64d0b3516a61a211 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324008 +INFO:root:found 0 records +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324008 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324008 +INFO:root:found 0 records +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324008 +INFO:root:found 0 records +INFO:root:set_name: mags_activity_set for gold:Gp0324008 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324008 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-j3p6wr33 +INFO:root:legacy_id: gold:Gp0324007 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-j3p6wr33 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b6564d0b3516a61a20f +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324007 +INFO:root:found 1 records +INFO:root:record: nmdc:d570f783c6449edab660111fc965f3d1, ReadQC activiity 503568_190751 +INFO:root:PassingDataObject: nmdc:8f37f51bee727cf671e62ba1e9e2603e +INFO:root:PassingDataObject: nmdc:eee43f1602f7eb54d87c3729f213e637 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324007 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324007 +INFO:root:found 1 records +INFO:root:record: nmdc:48b969725524a819fd466b4a7af8d761, Metagenome assembly 503568_190751 +WARNING:root:DataObjectNoType: nmdc:f849c6997666143faf4e729b6193404a +WARNING:root:DataObjectNoType: nmdc:5a53989f8c0a91831c23260fd349e41d +WARNING:root:DataObjectNoType: nmdc:375e1e473e18441e9080c176cabf8831 +WARNING:root:DataObjectNoType: nmdc:cf2bbb596ae0e5e3e906e787a0c60253 +WARNING:root:DataObjectNoType: nmdc:dcd428589885dbb8f00e501670a49a5d +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324007 +INFO:root:found 1 records +INFO:root:record: nmdc:6dfdf838817c96138022176ec33de297, MetagenomeAnnotation activity for gold:Gp0324007 +INFO:root:PassingDataObject: nmdc:9c87b1c29d828bdc93faf34c327bde5f +INFO:root:PassingDataObject: nmdc:38b88242b0c5067f1aa1af66656874cc +INFO:root:PassingDataObject: nmdc:8b3f45d3fe45663d015b00b497623413 +INFO:root:PassingDataObject: nmdc:371b3dfa9aeed37635869f677946db76 +INFO:root:PassingDataObject: nmdc:79dd5d2ff557659324f7babca6171348 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324007 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324007 +INFO:root:found 1 records +INFO:root:record: nmdc:4da086e85617558336ba4914f6c8ab4b, metaT activity for gold:Gp0324007 +INFO:root:PassingDataObject: nmdc:cad013e08e75f180fbc180e80387ed35 +INFO:root:PassingDataObject: nmdc:2adb1c1d08fdedb4aa4faa205b837ad3 +ERROR:root:DataObjectNotFound nmdc:369be15c709557b137c6ad6994ced3e4 for nmdc:metaT/nmdc:4da086e85617558336ba4914f6c8ab4b +ERROR:root:FailedDataObject: nmdc:95210ee65649c6a569e2e54656af6232, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4da086e85617558336ba4914f6c8ab4b, metaT activity for gold:Gp0324007 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-nq045s62 +INFO:root:legacy_id: gold:Gp0321299 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-nq045s62 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87dc64d0b3516a5f4fb4 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321299 +INFO:root:found 1 records +INFO:root:record: nmdc:b2f6b2cf59b449e1fa438b0334f14d28, Read QC Activity for nmdc:mga0dkaf15 +INFO:root:PassingDataObject: nmdc:72449959751e18d5ff5a51a7ce28479e +INFO:root:PassingDataObject: nmdc:37909f83dc6fe3cf2bb254578c9f7598 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321299 +INFO:root:found 1 records +INFO:root:record: nmdc:b2f6b2cf59b449e1fa438b0334f14d28, ReadBased Analysis Activity for nmdc:mga0dkaf15 +INFO:root:PassingDataObject: nmdc:3bbb20907cd56815e9fa5bdc9213bf30 +INFO:root:PassingDataObject: nmdc:d707dacebfe91040c10f13e41c1c565c +INFO:root:PassingDataObject: nmdc:70ceb63fde3acbd083edf3b4f9fd1e71 +INFO:root:PassingDataObject: nmdc:2110ee5724ed1e3893fedf9d9e092714 +INFO:root:PassingDataObject: nmdc:6880de0fa99323fae44dedf012c24c46 +INFO:root:PassingDataObject: nmdc:2408b29c15e30d8b143c4e48e38f0729 +INFO:root:PassingDataObject: nmdc:81503d14b8fdd24db6ce509f57cd8aa7 +INFO:root:PassingDataObject: nmdc:4d9b0409c0c88e5df9e373481d2350f0 +INFO:root:PassingDataObject: nmdc:979221ce28f60d8d067e41d96ba98b89 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321299 +INFO:root:found 1 records +INFO:root:record: nmdc:b2f6b2cf59b449e1fa438b0334f14d28, Assembly Activity for nmdc:mga0dkaf15 +INFO:root:PassingDataObject: nmdc:d84f785070c446dad9abf318d1488168 +INFO:root:PassingDataObject: nmdc:2758960c061b30e0a2afb300cfbe9b03 +INFO:root:PassingDataObject: nmdc:c71e1c62a06a4ae8a3db0bb674fc74fb +INFO:root:PassingDataObject: nmdc:c7140f2bf56a14b6aa919c5187e06b10 +INFO:root:PassingDataObject: nmdc:6388f1738ce99ea3eae3cbb237e93493 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321299 +INFO:root:found 1 records +INFO:root:record: nmdc:b2f6b2cf59b449e1fa438b0334f14d28, Annotation Activity for nmdc:mga0dkaf15 +INFO:root:PassingDataObject: nmdc:15c992867b0bb24db3af144470e91472 +INFO:root:PassingDataObject: nmdc:05bad3b0f5835990e515bd7947c979df +INFO:root:PassingDataObject: nmdc:d3830e56b4d3b6f96f3056b056e84aa7 +INFO:root:PassingDataObject: nmdc:8376ff39ae50632dcd72b674272efa4c +INFO:root:PassingDataObject: nmdc:c49b296c54492d621bdd2340506b7682 +INFO:root:PassingDataObject: nmdc:6d6401534817cd742d0ffd5575bf1133 +INFO:root:PassingDataObject: nmdc:dd81633fcea69ce9078234d3ef7d6bc1 +INFO:root:PassingDataObject: nmdc:524203c279382b90f6b1fa91a241c900 +INFO:root:PassingDataObject: nmdc:bb9055106162144681f7175c0202bf19 +INFO:root:PassingDataObject: nmdc:c5515ad7a5abb9b3124f1e56c7497e20 +INFO:root:PassingDataObject: nmdc:ffbbfe64c076d3daeeb9bcae3a15a20f +INFO:root:PassingDataObject: nmdc:753f96766137b91d03490b5a5b6dff38 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321299 +INFO:root:found 1 records +INFO:root:record: nmdc:b2f6b2cf59b449e1fa438b0334f14d28, MAGs Analysis Activity for nmdc:mga0dkaf15 +INFO:root:PassingDataObject: nmdc:5ec38380a55350e8c6baca4f278099eb +INFO:root:PassingDataObject: nmdc:82319414509cb49fb3a1dcd8bf5bc228 +INFO:root:PassingDataObject: nmdc:06e867a019989dee54d8904171a7bdcf +INFO:root:PassingDataObject: nmdc:a74cda09a271cff32dc746043a4cd76c +INFO:root:PassingDataObject: nmdc:bcdb64166995417e582c805a95347724 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:b2f6b2cf59b449e1fa438b0334f14d28 +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:b2f6b2cf59b449e1fa438b0334f14d28, MAGs Analysis Activity for nmdc:mga0dkaf15 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321299 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-555y6a80 +INFO:root:legacy_id: gold:Gp0321304 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-555y6a80 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b87fb64d0b3516a5f4fbd +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321304 +INFO:root:found 1 records +INFO:root:record: nmdc:09507c5a9789ec3e8d233ca37acd0af3, Read QC Activity for nmdc:mga09wys77 +INFO:root:PassingDataObject: nmdc:a616de3bc4e69358d872e54bc9e78815 +INFO:root:PassingDataObject: nmdc:339fa50c761894f9778d7808583c8eb8 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321304 +INFO:root:found 1 records +INFO:root:record: nmdc:09507c5a9789ec3e8d233ca37acd0af3, ReadBased Analysis Activity for nmdc:mga09wys77 +INFO:root:PassingDataObject: nmdc:757b8f84978bee12f48be481b4f2779d +INFO:root:PassingDataObject: nmdc:ab6f8e5e6cff287b4311323880b293cd +INFO:root:PassingDataObject: nmdc:04404ca86554593edfb2d1f3166b4f8f +INFO:root:PassingDataObject: nmdc:6b872051cfd1f4f3db863526913f7acf +INFO:root:PassingDataObject: nmdc:845166d84c380efb7fbfb9b690d8bdf2 +INFO:root:PassingDataObject: nmdc:f87e403b592998a404128fd0b9f59fe0 +INFO:root:PassingDataObject: nmdc:4fdfa65891ecd706ea2631aeac0be3d3 +INFO:root:PassingDataObject: nmdc:e535a52e2b76c0c7244ff113988641d9 +INFO:root:PassingDataObject: nmdc:8f1a2b0390f3b3d2992ec6f53ca60967 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321304 +INFO:root:found 1 records +INFO:root:record: nmdc:09507c5a9789ec3e8d233ca37acd0af3, Assembly Activity for nmdc:mga09wys77 +INFO:root:PassingDataObject: nmdc:51ebd1afa69539ec98ff6b608a1db92d +INFO:root:PassingDataObject: nmdc:37e45c6c2fc75c8dc45afd2484efbe7e +INFO:root:PassingDataObject: nmdc:a4d89f4c97e6996e8f7e57196038e62c +INFO:root:PassingDataObject: nmdc:26fdca4eead5c1045d40a4cf6817cdca +INFO:root:PassingDataObject: nmdc:5ad3d677e671b6d457f76b492294a872 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321304 +INFO:root:found 1 records +INFO:root:record: nmdc:09507c5a9789ec3e8d233ca37acd0af3, Annotation Activity for nmdc:mga09wys77 +INFO:root:PassingDataObject: nmdc:8dc62acc8712f86a913da16130d33585 +INFO:root:PassingDataObject: nmdc:273d791086bc810a2f50c29aafa1302d +INFO:root:PassingDataObject: nmdc:c6ac7b1d06775044d09ad3ed01c918f0 +INFO:root:PassingDataObject: nmdc:6eead1b7f41616ecaa6c97f9b3dbaa48 +INFO:root:PassingDataObject: nmdc:ab71163af0244c18a3663f4fbf9390a8 +INFO:root:PassingDataObject: nmdc:43c08ef4e29d8fa7ae3dd237102c7104 +INFO:root:PassingDataObject: nmdc:ea8b478444d87038dbd4f9cbad1c951c +INFO:root:PassingDataObject: nmdc:627e15dbc11b0b75da3b4237cfbf9530 +INFO:root:PassingDataObject: nmdc:72d27e31e841e1f1e928107678adc8e8 +INFO:root:PassingDataObject: nmdc:a36469d97154fde1a8bff554cd84cb21 +INFO:root:PassingDataObject: nmdc:b01b321111e5d84b61bcab874c93dc7d +INFO:root:PassingDataObject: nmdc:a9f880b94d0e9621d4f6ee2bfad16acf +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321304 +INFO:root:found 1 records +INFO:root:record: nmdc:09507c5a9789ec3e8d233ca37acd0af3, MAGs Analysis Activity for nmdc:mga09wys77 +INFO:root:PassingDataObject: nmdc:508873e86be184c7ad0d7661cbd29bc9 +INFO:root:PassingDataObject: nmdc:0350b8c1092fe81515c048472f5ea22a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321304 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-j73sfq18 +INFO:root:legacy_id: gold:Gp0321306 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-j73sfq18 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b880964d0b3516a5f4fc2 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321306 +INFO:root:found 1 records +INFO:root:record: nmdc:42ac9411b1f6faf436df37bec6a4b4b5, Read QC Activity for nmdc:mga0nzm789 +INFO:root:PassingDataObject: nmdc:01a4054d1d18bd416b54ac00d9c9bffa +INFO:root:PassingDataObject: nmdc:ef44a36ed6e729df6d001439d81a465d +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321306 +INFO:root:found 1 records +INFO:root:record: nmdc:42ac9411b1f6faf436df37bec6a4b4b5, ReadBased Analysis Activity for nmdc:mga0nzm789 +INFO:root:PassingDataObject: nmdc:72918467cb51c434260438a94021dacc +INFO:root:PassingDataObject: nmdc:c5785a60dd38f34d8cc8fb0fc6196979 +INFO:root:PassingDataObject: nmdc:5128d20d65ac144f8406dcb9ee98dd87 +INFO:root:PassingDataObject: nmdc:3a36a1d76c9bb67ab3c34472bf786584 +INFO:root:PassingDataObject: nmdc:99316ea95cfa0696c9e220ed3c095eb8 +INFO:root:PassingDataObject: nmdc:047c266cc253135d5cf0815ffaa0fd9b +INFO:root:PassingDataObject: nmdc:8c60b9a49694b1837fe1440deb37c60d +INFO:root:PassingDataObject: nmdc:08cdab3791277b065ab70bbf232a1dc6 +INFO:root:PassingDataObject: nmdc:74aa55ade63ecbe21ac1ff5541e5b865 +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321306 +INFO:root:found 1 records +INFO:root:record: nmdc:42ac9411b1f6faf436df37bec6a4b4b5, Assembly Activity for nmdc:mga0nzm789 +INFO:root:PassingDataObject: nmdc:b1971a86f626846bf2121c69f0c7e67b +INFO:root:PassingDataObject: nmdc:08b5a2dae8600b3d045f5df5daf970bf +INFO:root:PassingDataObject: nmdc:e507ba232f8467b1c7b54e4080147f33 +INFO:root:PassingDataObject: nmdc:83bb985099521308ef9e5fb014adeac5 +INFO:root:PassingDataObject: nmdc:015debea7febef83b4f830fe1cf2bc9a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321306 +INFO:root:found 1 records +INFO:root:record: nmdc:42ac9411b1f6faf436df37bec6a4b4b5, Annotation Activity for nmdc:mga0nzm789 +INFO:root:PassingDataObject: nmdc:f16b767f26a8a6405b814e4c91ee3998 +INFO:root:PassingDataObject: nmdc:bbfb35605abd13ca6c0fc867ef31424a +INFO:root:PassingDataObject: nmdc:8b1223840375fb9ec1427a1d0e80da78 +INFO:root:PassingDataObject: nmdc:38a609a5461d322ab5159ec752441196 +INFO:root:PassingDataObject: nmdc:0e5a0bffc43e5c983b2d9ad7eff8d64e +INFO:root:PassingDataObject: nmdc:2a5683600a4163edc49b4927b518ed3e +INFO:root:PassingDataObject: nmdc:f8a42f8a1f0aa8806b6d7f0317fc897b +INFO:root:PassingDataObject: nmdc:cee6a05d68591337672956b2dd11561d +INFO:root:PassingDataObject: nmdc:8359e0ed07a23a83941cf04ade890ffa +INFO:root:PassingDataObject: nmdc:ff3e08d52ed83a2929e57456b61b885e +INFO:root:PassingDataObject: nmdc:ce3d8b1e2e90a25778340808f52ea891 +INFO:root:PassingDataObject: nmdc:ef5543c350754550751700804110c12a +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321306 +INFO:root:found 1 records +INFO:root:record: nmdc:42ac9411b1f6faf436df37bec6a4b4b5, MAGs Analysis Activity for nmdc:mga0nzm789 +INFO:root:PassingDataObject: nmdc:2990cf407192f3066c2104717146d0b1 +INFO:root:PassingDataObject: nmdc:a10d42dded7defe66a9fbb97affbffc1 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321306 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-rykwdc49 +INFO:root:legacy_id: gold:Gp0324010 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-rykwdc49 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b7364d0b3516a61a215 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324010 +INFO:root:found 1 records +INFO:root:record: nmdc:5f7aaf80fe1784a1d1ae5b14ea122e5c, ReadQC activiity 503568_190754 +INFO:root:PassingDataObject: nmdc:1d48fd995d46f66858c2517caee9e9fa +INFO:root:PassingDataObject: nmdc:80d9193ba61481a1101f4372beadbf24 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324010 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324010 +INFO:root:found 1 records +INFO:root:record: nmdc:aa6fb2c4077c6ac29e279e7f40c540c7, Metagenome assembly 503568_190754 +WARNING:root:DataObjectNoType: nmdc:9361d26104825a6e7351a011ed90b8ec +WARNING:root:DataObjectNoType: nmdc:74790e3e176d08c1be0dfff461a6c20b +WARNING:root:DataObjectNoType: nmdc:767f9651735244a1bbd3608ca483921c +WARNING:root:DataObjectNoType: nmdc:15c17bc91baa24259f6700c7f7714f2c +WARNING:root:DataObjectNoType: nmdc:6978280949bfb79f806a0f1eb751bab7 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324010 +INFO:root:found 1 records +INFO:root:record: nmdc:a2eaeceb2f0a6b07083bdffd24e5f713, MetagenomeAnnotation activity for gold:Gp0324010 +INFO:root:PassingDataObject: nmdc:c11102fb2ee153ad5470abf7b419e12b +INFO:root:PassingDataObject: nmdc:9675c0b5235b3d814b9e9a6fa644cd60 +INFO:root:PassingDataObject: nmdc:2294751444e1f9a8e00ac11dbe3274ca +INFO:root:PassingDataObject: nmdc:8c7af7e2c448b446e93a982193206e51 +INFO:root:PassingDataObject: nmdc:5c96a18b1fbf6a0174689e8f1f82b504 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324010 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324010 +INFO:root:found 1 records +INFO:root:record: nmdc:18c16f90bbe0d16dc1eceb9f548674b8, metaT activity for gold:Gp0324010 +ERROR:root:DataObjectNotFound nmdc:35280ee871ca08e52849a30f18c497b0 for nmdc:metaT/nmdc:18c16f90bbe0d16dc1eceb9f548674b8 +ERROR:root:FailedDataObject: nmdc:4730bd9ce56df101cac1ab26951dce20, +ERROR:root:FailedDataObject: nmdc:10f05b665c93ff07548a0b46ea28b4ff, +ERROR:root:FailedDataObject: nmdc:9b9a71df665fef1acdfbb0a3360dbab0, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:18c16f90bbe0d16dc1eceb9f548674b8, metaT activity for gold:Gp0324010 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-d70pma65 +INFO:root:legacy_id: gold:Gp0324009 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-d70pma65 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b6e64d0b3516a61a213 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324009 +INFO:root:found 1 records +INFO:root:record: nmdc:5906cfd679da8489ee1bf2d0a8d9ae8d, ReadQC activiity 503568_190753 +INFO:root:PassingDataObject: nmdc:786fed5553aeed8b629c82e7c5f75035 +INFO:root:PassingDataObject: nmdc:b05f47e615262874a65ada3245461db0 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324009 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324009 +INFO:root:found 1 records +INFO:root:record: nmdc:593bb32f7dab3f3bdaf96aef596944aa, Metagenome assembly 503568_190753 +WARNING:root:DataObjectNoType: nmdc:5ff4f16e9624d841fcb4ffe773a92d6c +WARNING:root:DataObjectNoType: nmdc:9efdc83a3ec26bb98cff59c52d3313ed +WARNING:root:DataObjectNoType: nmdc:bb3f40bcda0e78080d6435e564691f0a +WARNING:root:DataObjectNoType: nmdc:073ee4108b8a6eb7eeed199a807d2218 +WARNING:root:DataObjectNoType: nmdc:06208479e17d720be233c4064502d911 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324009 +INFO:root:found 1 records +INFO:root:record: nmdc:1993a481f92d491d0550ae7c97233164, MetagenomeAnnotation activity for gold:Gp0324009 +INFO:root:PassingDataObject: nmdc:d6bcf05eae370d2ccdde245766543bc6 +INFO:root:PassingDataObject: nmdc:b5fafe493981cff782b183f43d8ec934 +INFO:root:PassingDataObject: nmdc:e0adf4c8e73c87faaff185a4338aa323 +INFO:root:PassingDataObject: nmdc:a290f058d7de111bbb71d2ae6991346e +INFO:root:PassingDataObject: nmdc:62f6e9a15c81a4e3fad8e21c2220ee8b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324009 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324009 +INFO:root:found 1 records +INFO:root:record: nmdc:551df525ca7e42247496a78f06bf3d2a, metaT activity for gold:Gp0324009 +INFO:root:PassingDataObject: nmdc:8a4970f4f79d35b29f2c44efbb3264b9 +INFO:root:PassingDataObject: nmdc:fe62845b55f6eaca8c6c723cec179fe8 +ERROR:root:DataObjectNotFound nmdc:8ec141e339b4bedc49fbef7236422bec for nmdc:metaT/nmdc:551df525ca7e42247496a78f06bf3d2a +ERROR:root:FailedDataObject: nmdc:30bb1a36fa7c20f4133ae54e3ff0fb6d, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:551df525ca7e42247496a78f06bf3d2a, metaT activity for gold:Gp0324009 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-n7a6q756 +INFO:root:legacy_id: gold:Gp0324011 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-n7a6q756 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b7964d0b3516a61a217 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324011 +INFO:root:found 1 records +INFO:root:record: nmdc:bb66b61c319a0fcd91e838c4e92e4136, ReadQC activiity 503568_190755 +INFO:root:PassingDataObject: nmdc:283985767a8f638808096e7e2c84a6a8 +INFO:root:PassingDataObject: nmdc:13eeb84b2cba3495012d570cf5f63887 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324011 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324011 +INFO:root:found 1 records +INFO:root:record: nmdc:bf1804579749f77ffa53fb5374466894, Metagenome assembly 503568_190755 +WARNING:root:DataObjectNoType: nmdc:19a72ae1120f929c620b56189a81a3d9 +WARNING:root:DataObjectNoType: nmdc:6925f067188452145dbbef7e94bf0b65 +WARNING:root:DataObjectNoType: nmdc:9f01c13bcea834da2c37f174935c9f1e +WARNING:root:DataObjectNoType: nmdc:283a48b6c9e677914acc9995ab4ccedc +WARNING:root:DataObjectNoType: nmdc:5ad02b131a390b65a424b1cd6e2447dd +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324011 +INFO:root:found 0 records +INFO:root:set_name: mags_activity_set for gold:Gp0324011 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324011 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-jfmda763 +INFO:root:legacy_id: gold:Gp0324006 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-jfmda763 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b6164d0b3516a61a20d +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324006 +INFO:root:found 1 records +INFO:root:record: nmdc:587619a2aeb543289ec86647e13e8fc0, ReadQC activiity 503568_190750 +INFO:root:PassingDataObject: nmdc:8ae0305416d7395ffc8ab554718bbd32 +INFO:root:PassingDataObject: nmdc:3572c83a31e0e5b8aa3c17b06a6e82cc +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324006 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324006 +INFO:root:found 1 records +INFO:root:record: nmdc:06f4ce4cf554bba460906cbef0eb0469, Metagenome assembly 503568_190750 +WARNING:root:DataObjectNoType: nmdc:d0b40c702b1a10d401c40d694637b092 +WARNING:root:DataObjectNoType: nmdc:e847d707b704922f8b156c6bc5b468c0 +WARNING:root:DataObjectNoType: nmdc:5d25961f72ee4e762133ed677fe5092e +WARNING:root:DataObjectNoType: nmdc:23de73429ea186eb23a46592003001f4 +WARNING:root:DataObjectNoType: nmdc:595f01b9f2496cf4a25203e8b5e93184 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324006 +INFO:root:found 1 records +INFO:root:record: nmdc:c7e6625c228fb16c512a0ceefd10fdcf, MetagenomeAnnotation activity for gold:Gp0324006 +INFO:root:PassingDataObject: nmdc:a360c42d1403084110719be0d6d8d47a +INFO:root:PassingDataObject: nmdc:b47043e6401a909c5c162523012c5df4 +INFO:root:PassingDataObject: nmdc:19ba48345e1e1c99913a42d7b7984084 +INFO:root:PassingDataObject: nmdc:8c7488ec77a53cfe84dac3d0a4a251d5 +INFO:root:PassingDataObject: nmdc:d6a8495af128bfce1e1dd5a3a8f51102 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324006 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324006 +INFO:root:found 1 records +INFO:root:record: nmdc:36fc337d854ea6b3b72a34efc7d082ce, metaT activity for gold:Gp0324006 +INFO:root:PassingDataObject: nmdc:769a37fa30f0242c0487398499f5dd77 +ERROR:root:DataObjectNotFound nmdc:3d2cc3c5ba651c5f92302ee5c1c0d36b for nmdc:metaT/nmdc:36fc337d854ea6b3b72a34efc7d082ce +ERROR:root:FailedDataObject: nmdc:97e5ab988242d8ee43bea06b3699ffaf, +ERROR:root:FailedDataObject: nmdc:3180cab32153be7581a10ad54bf6696e, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:36fc337d854ea6b3b72a34efc7d082ce, metaT activity for gold:Gp0324006 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-syptzp44 +INFO:root:legacy_id: gold:Gp0321275 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-syptzp44 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b3b86e964d0b3516a5f4f63 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0321275 +INFO:root:found 1 records +INFO:root:record: nmdc:5f54bdb753d1a7ad34dc79e61b3ed0fa, Read QC Activity for nmdc:mga0pqkj47 +INFO:root:PassingDataObject: nmdc:980df32344846eb981502e71af93c85f +INFO:root:PassingDataObject: nmdc:3a1a4fe78b3dd03f097792fcd1e30305 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0321275 +INFO:root:found 1 records +INFO:root:record: nmdc:5f54bdb753d1a7ad34dc79e61b3ed0fa, ReadBased Analysis Activity for nmdc:mga0pqkj47 +INFO:root:PassingDataObject: nmdc:5d404d7eec134b30383a6112fa4269d1 +INFO:root:PassingDataObject: nmdc:3719cce5d6867795c18141327b84a032 +INFO:root:PassingDataObject: nmdc:14e5276624a783bff4d077ab7504e497 +INFO:root:PassingDataObject: nmdc:2a05dbe8303486b80cd7f5f4715fc13e +INFO:root:PassingDataObject: nmdc:8e4321ff59b7249346909b6bfe096c5d +INFO:root:PassingDataObject: nmdc:9b692b0d1c841fb410c8f75ba73f5f32 +INFO:root:PassingDataObject: nmdc:e312b2d0977d58b05315a41a88198b99 +INFO:root:PassingDataObject: nmdc:1aded71e0bf9d2719ee5e5fdfaa330a5 +INFO:root:PassingDataObject: nmdc:a2165b66984e60f20e793b8db600f6cc +INFO:root:passing_data_objects: 9 +INFO:root:PassingRecords: read_based_taxonomy_analysis_activity_set, 1 +INFO:root:set_name: metagenome_assembly_set for gold:Gp0321275 +INFO:root:found 1 records +INFO:root:record: nmdc:5f54bdb753d1a7ad34dc79e61b3ed0fa, Assembly Activity for nmdc:mga0pqkj47 +INFO:root:PassingDataObject: nmdc:464d8ee5792380ba02417f61ccfcaab6 +INFO:root:PassingDataObject: nmdc:2c34833047d83dca6df472c5af3d492a +INFO:root:PassingDataObject: nmdc:891841098b20a9ec4602e2b285f97d31 +INFO:root:PassingDataObject: nmdc:8cbadcf596614f4d78317091c7784ea9 +INFO:root:PassingDataObject: nmdc:c257d821b1452edef4e3fe35cf0af6da +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0321275 +INFO:root:found 1 records +INFO:root:record: nmdc:5f54bdb753d1a7ad34dc79e61b3ed0fa, Annotation Activity for nmdc:mga0pqkj47 +INFO:root:PassingDataObject: nmdc:93316f28ac45db4865d2b664ad844a6b +INFO:root:PassingDataObject: nmdc:bd2fb87ef33f826d15601dd00c9a5caf +INFO:root:PassingDataObject: nmdc:4620037dc6a998e81d5313e93cd1d6a1 +INFO:root:PassingDataObject: nmdc:0153bb184fe707e1808a817ff2c4271e +INFO:root:PassingDataObject: nmdc:960bec2baeeec399205f3ce017e2f11f +INFO:root:PassingDataObject: nmdc:042073590939b59053afc5b32750a3c6 +INFO:root:PassingDataObject: nmdc:80cfb8916ce184e809003cb2fb7ab20b +INFO:root:PassingDataObject: nmdc:8b84795a26fbdae663acbde9565432fa +INFO:root:PassingDataObject: nmdc:a7832f4ec1a6d848f18d8687e963898c +INFO:root:PassingDataObject: nmdc:0a8fbae04b4ff55e71d7287142c2e706 +INFO:root:PassingDataObject: nmdc:37ffa313a511d5d0fecff0c0fbd78966 +INFO:root:PassingDataObject: nmdc:9a2c4dd3121d966adcd90d76fb4a8442 +INFO:root:passing_data_objects: 12 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0321275 +INFO:root:found 1 records +INFO:root:record: nmdc:5f54bdb753d1a7ad34dc79e61b3ed0fa, MAGs Analysis Activity for nmdc:mga0pqkj47 +INFO:root:PassingDataObject: nmdc:2a43b73694d9a716e042b8d958a203b7 +INFO:root:PassingDataObject: nmdc:f2831bc4ad1709b98ca2602acdf927e6 +INFO:root:PassingDataObject: nmdc:75bf5ad3fb0dc99ba93baa2b88841a92 +INFO:root:PassingDataObject: nmdc:715afbc6d044f0f27fd1217fad306842 +INFO:root:PassingDataObject: nmdc:e0e1a522ae56c12fecfa052bb07c99b2 +ERROR:root:DataObjectNotFound nmdc:d41d8cd98f00b204e9800998ecf8427e for nmdc:MAGsAnalysisActivity/nmdc:5f54bdb753d1a7ad34dc79e61b3ed0fa +ERROR:root:failing_data_objects: 5 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5f54bdb753d1a7ad34dc79e61b3ed0fa, MAGs Analysis Activity for nmdc:mga0pqkj47 +ERROR:root:FailedRecords: mags_activity_set, 1 +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0321275 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-4rcmsj76 +INFO:root:legacy_id: gold:Gp0324035 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-4rcmsj76 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b8664d0b3516a61a21c +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324035 +INFO:root:found 1 records +INFO:root:record: nmdc:228ba8d6c980774a075b27dfc5753839, ReadQC activiity 503568_191738 +INFO:root:PassingDataObject: nmdc:0ef28c74fb7d7fcc7c1c1a0ef0d87326 +INFO:root:PassingDataObject: nmdc:0aaef36f9e447aaef957bd770a4e8269 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324035 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324035 +INFO:root:found 1 records +INFO:root:record: nmdc:b817fa895ef0478c1b520d81234ed4e6, Metagenome assembly 503568_191738 +WARNING:root:DataObjectNoType: nmdc:d53437efcaf24778eef7b285dbbace08 +WARNING:root:DataObjectNoType: nmdc:c67be2f9e06c3c44d396172ca9aed50d +WARNING:root:DataObjectNoType: nmdc:38476d2025aab54b89326930d1d99a7e +WARNING:root:DataObjectNoType: nmdc:2f30238a294382b213724adaf35d932e +WARNING:root:DataObjectNoType: nmdc:1a2c5a6baeb07545dbbc7ac0f165041e +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324035 +INFO:root:found 1 records +INFO:root:record: nmdc:a96c1578090a15845e5920f52dc01a44, MetagenomeAnnotation activity for gold:Gp0324035 +INFO:root:PassingDataObject: nmdc:ce42394e8258158bfed53a8eb36abf9e +INFO:root:PassingDataObject: nmdc:15f811903f4818f3ebcc659fad4f314b +INFO:root:PassingDataObject: nmdc:f199533bfc94d39e60c95c13efadf95a +INFO:root:PassingDataObject: nmdc:5c31921b8cc256af347c96f0f3bae5fb +INFO:root:PassingDataObject: nmdc:e75c21f16fd4945cacc7b67ef5fcee48 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324035 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324035 +INFO:root:found 1 records +INFO:root:record: nmdc:aa1d34caac3be3d5e73569a3f475ef9f, metaT activity for gold:Gp0324035 +INFO:root:PassingDataObject: nmdc:70190d8cb7fda43907d4d76d78ae32bd +INFO:root:PassingDataObject: nmdc:13aa8beee76cfe626fd0387011647103 +INFO:root:PassingDataObject: nmdc:890326c9819489d16b8c220beb1acbfd +ERROR:root:DataObjectNotFound nmdc:957a5665e44143eea0c3a99b5665a51d for nmdc:metaT/nmdc:aa1d34caac3be3d5e73569a3f475ef9f +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:aa1d34caac3be3d5e73569a3f475ef9f, metaT activity for gold:Gp0324035 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-5011mw53 +INFO:root:legacy_id: gold:Gp0324036 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-5011mw53 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b8e64d0b3516a61a21f +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324036 +INFO:root:found 1 records +INFO:root:record: nmdc:9e1febff1e86cc8d6a107040d37e319c, ReadQC activiity 503568_191739 +INFO:root:PassingDataObject: nmdc:42d5f222eba7f6bc3dd54723afc45634 +INFO:root:PassingDataObject: nmdc:b42bcd31c0f3314c936cb306dcdb1c89 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324036 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324036 +INFO:root:found 1 records +INFO:root:record: nmdc:ba273004d5ebc92c8006bd0907115554, Metagenome assembly 503568_191739 +WARNING:root:DataObjectNoType: nmdc:4cbdadf247e6c52f76b104ad880e87f9 +WARNING:root:DataObjectNoType: nmdc:4c111d63caf7258fb858868a8f60c5db +WARNING:root:DataObjectNoType: nmdc:4468a6fbc0d9abd0cb21c5a7d2a99300 +WARNING:root:DataObjectNoType: nmdc:66dcd1e5408ccdaa8ec4fd3c78edfe96 +WARNING:root:DataObjectNoType: nmdc:eb7197c56e1c14c26db357109d6256b6 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324036 +INFO:root:found 1 records +INFO:root:record: nmdc:34472e64c7f249a6e1f2b0f9445b89d6, MetagenomeAnnotation activity for gold:Gp0324036 +INFO:root:PassingDataObject: nmdc:6a681d736f05ceda84dd6794b91e492e +INFO:root:PassingDataObject: nmdc:cdd92fcbc8f886b03e916a4cc3ce5d5d +INFO:root:PassingDataObject: nmdc:52f62ff6a8bf9f2fa990c7833bf917f8 +INFO:root:PassingDataObject: nmdc:bf80f6977cb32659cc227c17a1bb1002 +INFO:root:PassingDataObject: nmdc:da4820355c96d6e07432d6e3c73cf0e3 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324036 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324036 +INFO:root:found 1 records +INFO:root:record: nmdc:ce28f6d5264c2669a19ed786d8e76ba6, metaT activity for gold:Gp0324036 +INFO:root:PassingDataObject: nmdc:868bcc87e358228330a2a151b75ca209 +INFO:root:PassingDataObject: nmdc:030808cbe8122404987a9a39540b8803 +ERROR:root:DataObjectNotFound nmdc:fcc5bd82615fab43bb54006632862521 for nmdc:metaT/nmdc:ce28f6d5264c2669a19ed786d8e76ba6 +ERROR:root:FailedDataObject: nmdc:7bd1bba9c97db33619c0eac988f55598, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ce28f6d5264c2669a19ed786d8e76ba6, metaT activity for gold:Gp0324036 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-ba6mgx04 +INFO:root:legacy_id: gold:Gp0324033 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-ba6mgx04 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b7e64d0b3516a61a219 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324033 +INFO:root:found 1 records +INFO:root:record: nmdc:c3a2883eba29366bafd69743a59421f7, ReadQC activiity 503568_191736 +INFO:root:PassingDataObject: nmdc:c0617cc80bd3a7ab5bd64f5fb73dccc8 +INFO:root:PassingDataObject: nmdc:8f853b4332de68f3e45a2986980b279b +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324033 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324033 +INFO:root:found 1 records +INFO:root:record: nmdc:8b713e98874225415bade4316ecb8461, Metagenome assembly 503568_191736 +WARNING:root:DataObjectNoType: nmdc:603e3af35f33d0a5c87fc7a111c279e2 +WARNING:root:DataObjectNoType: nmdc:17d87320bafa602e2e902a6aa2a2bc93 +WARNING:root:DataObjectNoType: nmdc:9926810bf1cd1ef2d95d30d999db37b8 +WARNING:root:DataObjectNoType: nmdc:eb74dda0d0bffb4ad4db6e46bb25c4a1 +WARNING:root:DataObjectNoType: nmdc:6bc7d031516e2f0ff573f10a4310e7c0 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324033 +INFO:root:found 1 records +INFO:root:record: nmdc:07ee3c5a879a27d082ee3e6f3518ca1b, MetagenomeAnnotation activity for gold:Gp0324033 +INFO:root:PassingDataObject: nmdc:de880213ecda64a020b441ed39fec8fe +INFO:root:PassingDataObject: nmdc:dc174a64d99735754a490cb0a7477a7c +INFO:root:PassingDataObject: nmdc:1701d11eff72da4ff4391c0eec9754d5 +INFO:root:PassingDataObject: nmdc:ccc57fd349c767e650109bfcb422f9c1 +INFO:root:PassingDataObject: nmdc:3ea20a0e1065c3fb220304961c16220d +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324033 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324033 +INFO:root:found 1 records +INFO:root:record: nmdc:835a086fbd66902932f9747bb0a4aaa7, metaT activity for gold:Gp0324033 +INFO:root:PassingDataObject: nmdc:d98c2ddd584dad01799d7604664ae71e +INFO:root:PassingDataObject: nmdc:1bf3ecbb7e900055c54119a8eeeca5fb +ERROR:root:DataObjectNotFound nmdc:8f6ed75bd49fa03502adbd7ec7c55a09 for nmdc:metaT/nmdc:835a086fbd66902932f9747bb0a4aaa7 +ERROR:root:FailedDataObject: nmdc:48504eafd6d1bcfebb8abe4c69cdff14, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:835a086fbd66902932f9747bb0a4aaa7, metaT activity for gold:Gp0324033 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-y4ee1829 +INFO:root:legacy_id: gold:Gp0324034 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-y4ee1829 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b8264d0b3516a61a21b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324034 +INFO:root:found 1 records +INFO:root:record: nmdc:0d0f9636a817efb51e5d70d91045e4d1, ReadQC activiity 503568_191737 +INFO:root:PassingDataObject: nmdc:42aeb7dcb4c2c8db8a24391b4f19bf5d +INFO:root:PassingDataObject: nmdc:f5cab2a9245ae8c3b2a96eeaa9c48bfc +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324034 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324034 +INFO:root:found 1 records +INFO:root:record: nmdc:4132492c56fe1e6c7d0fa05377d5f1ff, Metagenome assembly 503568_191737 +WARNING:root:DataObjectNoType: nmdc:aa296cea444bb9cd11fa82793032b1b0 +WARNING:root:DataObjectNoType: nmdc:327332d6a186ebffe2c40fc2127f0b86 +WARNING:root:DataObjectNoType: nmdc:2c7971b5b0d8d974f222c9baa0a47890 +WARNING:root:DataObjectNoType: nmdc:75e17767aa1bc200f6eb1637a6c69b48 +WARNING:root:DataObjectNoType: nmdc:cca1ac3ab0142f63f341992f4ef4d579 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324034 +INFO:root:found 1 records +INFO:root:record: nmdc:8c59b25253e4a63f0731b74909855e43, MetagenomeAnnotation activity for gold:Gp0324034 +INFO:root:PassingDataObject: nmdc:22bfbb1f580d09ec2533f9da5ab1ad7b +INFO:root:PassingDataObject: nmdc:f63d0492f1b94f962870177812291a4d +INFO:root:PassingDataObject: nmdc:fba9cf71c7e014e379cfd9eccc235ef7 +INFO:root:PassingDataObject: nmdc:df89915c9af3f9bf4cf3eaa7fcc4e781 +INFO:root:PassingDataObject: nmdc:4ba580d35ebbacdd61dcf38f0efaa5d2 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324034 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324034 +INFO:root:found 1 records +INFO:root:record: nmdc:d656258f90d36cab30b3e7467b945342, metaT activity for gold:Gp0324034 +INFO:root:PassingDataObject: nmdc:eb854743ead9f8e2b91528877551bc17 +ERROR:root:DataObjectNotFound nmdc:af403f9e2180b4ee5f0d536f6130a50d for nmdc:metaT/nmdc:d656258f90d36cab30b3e7467b945342 +ERROR:root:FailedDataObject: nmdc:4c75fee914dccf1d4f0c980b268dd246, +ERROR:root:FailedDataObject: nmdc:12d494f22c676524537ba98733679f94, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:d656258f90d36cab30b3e7467b945342, metaT activity for gold:Gp0324034 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-7ar08g52 +INFO:root:legacy_id: gold:Gp0324038 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-7ar08g52 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b9664d0b3516a61a222 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324038 +INFO:root:found 1 records +INFO:root:record: nmdc:29e83bf1f5815241b9e8adb59f838797, ReadQC activiity 503568_191741 +INFO:root:PassingDataObject: nmdc:8eab835b6a86f0ef5b193598f9762b8d +INFO:root:PassingDataObject: nmdc:945da71c18a7e1085e906e0c9852aed8 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324038 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324038 +INFO:root:found 1 records +INFO:root:record: nmdc:3a9420c939e9d1b6c662cfe16aa93c41, Metagenome assembly 503568_191741 +WARNING:root:DataObjectNoType: nmdc:4da7c3bf2fb29ba8e136265b59525ea4 +WARNING:root:DataObjectNoType: nmdc:38fb6bf2888ca9b8909bcfa567abaab4 +WARNING:root:DataObjectNoType: nmdc:24be75be3850137d6a7d43547f36f941 +WARNING:root:DataObjectNoType: nmdc:7ab75e53cb9f8f4859e18fad0c7fc30c +WARNING:root:DataObjectNoType: nmdc:6658c27261dfe1ad1dc3d6c87441cd68 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324038 +INFO:root:found 1 records +INFO:root:record: nmdc:567e35cfffbc1e0ebc1e2c781ce726e3, MetagenomeAnnotation activity for gold:Gp0324038 +INFO:root:PassingDataObject: nmdc:7abb0722f447e0bd10a167427baaba52 +INFO:root:PassingDataObject: nmdc:e4baa40c20b579766e7e635186ee13e1 +INFO:root:PassingDataObject: nmdc:103e68b77fdade3bed75ed960fa0600b +INFO:root:PassingDataObject: nmdc:f87a7fb9b56919637a310e10d0de9158 +INFO:root:PassingDataObject: nmdc:94234da5f78c857e82a597f6c8696ad2 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324038 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324038 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-w0h23x97 +INFO:root:legacy_id: gold:Gp0324037 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-w0h23x97 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b9364d0b3516a61a221 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324037 +INFO:root:found 1 records +INFO:root:record: nmdc:e20b174fc9488fd82ebcd9a9a929616e, ReadQC activiity 503568_191740 +INFO:root:PassingDataObject: nmdc:43c0406d75f68ae5dd71ffe261c1c8ed +INFO:root:PassingDataObject: nmdc:bb780f2bd825acd8e232d78f570f9bfc +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324037 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324037 +INFO:root:found 1 records +INFO:root:record: nmdc:2dde1ce95a96f1c99872e2ad99bffc42, Metagenome assembly 503568_191740 +WARNING:root:DataObjectNoType: nmdc:a7b61e3a0656ff3a98fb1e36e2f202c4 +WARNING:root:DataObjectNoType: nmdc:d8f2dc43879e1c4d35a063d14c7e4826 +WARNING:root:DataObjectNoType: nmdc:5f48f28400adbe6ca0d2bca894f0bee9 +WARNING:root:DataObjectNoType: nmdc:891e07bceb811b87f783568832ae84e6 +WARNING:root:DataObjectNoType: nmdc:61a987a9494fe2838ec9506394216473 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324037 +INFO:root:found 1 records +INFO:root:record: nmdc:ff1fe327ab9d07ae8affd29e3dbef16c, MetagenomeAnnotation activity for gold:Gp0324037 +INFO:root:PassingDataObject: nmdc:29be10bfedd1dae7f7f03658f19dd8b2 +INFO:root:PassingDataObject: nmdc:1e4d2119e95c8bb161aa5bccb2bdfd95 +INFO:root:PassingDataObject: nmdc:3535f0006246ef9de6625ca968721003 +INFO:root:PassingDataObject: nmdc:d55d7ef47aaabbd1c7235b489a38cdd5 +INFO:root:PassingDataObject: nmdc:a42cc9a144fc675cdcb0c11cfb723887 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324037 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324037 +INFO:root:found 1 records +INFO:root:record: nmdc:c2c77ec3a7535421c0589422f7155af8, metaT activity for gold:Gp0324037 +ERROR:root:DataObjectNotFound nmdc:c8d6693287398701b91c4d194856d0f3 for nmdc:metaT/nmdc:c2c77ec3a7535421c0589422f7155af8 +ERROR:root:FailedDataObject: nmdc:81b95edbf7bc629a883e5485e896c98c, +ERROR:root:FailedDataObject: nmdc:7d93ba005e4216c1b53c37345762731c, +ERROR:root:FailedDataObject: nmdc:5968b0198d30a6b7caff8bb8b988da5d, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c2c77ec3a7535421c0589422f7155af8, metaT activity for gold:Gp0324037 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-z1s54m71 +INFO:root:legacy_id: gold:Gp0324039 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-z1s54m71 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8b9b64d0b3516a61a224 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324039 +INFO:root:found 1 records +INFO:root:record: nmdc:04e8f0cf51f573c55f3acf69f6c46aec, ReadQC activiity 503568_191742 +INFO:root:PassingDataObject: nmdc:2170eef5b4469483a8bed26bb773f5b7 +INFO:root:PassingDataObject: nmdc:d1075d00b58cdf5f3891cf12d84721d9 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324039 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324039 +INFO:root:found 1 records +INFO:root:record: nmdc:ea40b2a7c863ada2aa2f56091ffdcb22, Metagenome assembly 503568_191742 +WARNING:root:DataObjectNoType: nmdc:ef2e8f8bbff2fa30ef75935b110d9aaa +WARNING:root:DataObjectNoType: nmdc:ca3149240f9f7c91bd38ce8aedc858fc +WARNING:root:DataObjectNoType: nmdc:fa5c08246104cd159e03b1764d209a7c +WARNING:root:DataObjectNoType: nmdc:0770f517a3befbbce0de2bfd786952e6 +WARNING:root:DataObjectNoType: nmdc:65b3a13846b1db032c0159d3b14d1073 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324039 +INFO:root:found 1 records +INFO:root:record: nmdc:e1952aad2afebadbac8eb462b6a84d2b, MetagenomeAnnotation activity for gold:Gp0324039 +INFO:root:PassingDataObject: nmdc:8da5c19e0e7f9c3d718c281353a3bff4 +INFO:root:PassingDataObject: nmdc:3adb2b20d695914416a87966887600c4 +INFO:root:PassingDataObject: nmdc:d377688ba7146e25d5efeacb7e402d31 +INFO:root:PassingDataObject: nmdc:3e6da90d34455517870460bcf382eaf5 +INFO:root:PassingDataObject: nmdc:b4c8c0d3f27b033097b6b194123ce055 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324039 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324039 +INFO:root:found 1 records +INFO:root:record: nmdc:59b9b65a44178f6e84574a7d2188dbfb, metaT activity for gold:Gp0324039 +ERROR:root:DataObjectNotFound nmdc:7455b386b754925ce055f8f585f6242c for nmdc:metaT/nmdc:59b9b65a44178f6e84574a7d2188dbfb +ERROR:root:FailedDataObject: nmdc:dbc2829a4cbcd4236776e161a3970bb9, +ERROR:root:FailedDataObject: nmdc:879c00c000a1fbfbf94afd998d4169ed, +ERROR:root:FailedDataObject: nmdc:cf45418e3e01b80f426f9167be70e123, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:59b9b65a44178f6e84574a7d2188dbfb, metaT activity for gold:Gp0324039 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-mxb1jp80 +INFO:root:legacy_id: gold:Gp0324040 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-mxb1jp80 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8ba164d0b3516a61a227 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324040 +INFO:root:found 1 records +INFO:root:record: nmdc:f6f31765489bd43d9ea9ca0fa6a8af8a, ReadQC activiity 503568_191743 +INFO:root:PassingDataObject: nmdc:5e220105f8713dbb00a38eb3013b0f93 +INFO:root:PassingDataObject: nmdc:2dc9de0a717b31bccf2732333cce2784 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324040 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324040 +INFO:root:found 1 records +INFO:root:record: nmdc:e8985fa8a5edb84840700f492b0c76e9, Metagenome assembly 503568_191743 +WARNING:root:DataObjectNoType: nmdc:afe9cb71484df5b0297832f46cc01a92 +WARNING:root:DataObjectNoType: nmdc:d2affd46cebf4305e8805b65af1dabb3 +WARNING:root:DataObjectNoType: nmdc:70f66e0b5439315d48f1a206ccb0f310 +WARNING:root:DataObjectNoType: nmdc:df2eece162d38ad930ca4af47bfb9031 +WARNING:root:DataObjectNoType: nmdc:b323881063b66a4a90803e5b0d07f50a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324040 +INFO:root:found 1 records +INFO:root:record: nmdc:647b163bdcb9528b8dcc8ab9b506c957, MetagenomeAnnotation activity for gold:Gp0324040 +INFO:root:PassingDataObject: nmdc:7796820582563a8b3867de9554b1a8ac +INFO:root:PassingDataObject: nmdc:1fd680ec996ea2043fd34468e5c3464a +INFO:root:PassingDataObject: nmdc:c177fd732e25dda4d2afa10159e8d0b4 +INFO:root:PassingDataObject: nmdc:dca7ca0cc779868ceac63aa3af6a3070 +INFO:root:PassingDataObject: nmdc:b09c3cd4ad025e106e51f3234bf3850f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324040 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324040 +INFO:root:found 1 records +INFO:root:record: nmdc:fe98163e86002958865b1a9d24abc6c7, metaT activity for gold:Gp0324040 +INFO:root:PassingDataObject: nmdc:683952b4d96ca39493dcd52097f34818 +INFO:root:PassingDataObject: nmdc:cff7208edcdc96d1ea22c745319ce084 +INFO:root:PassingDataObject: nmdc:a3a595db2fefdc1cc6e79cc2e7ef6656 +ERROR:root:DataObjectNotFound nmdc:5e81b6549123027d1b7b9f439bbd1cd0 for nmdc:metaT/nmdc:fe98163e86002958865b1a9d24abc6c7 +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:fe98163e86002958865b1a9d24abc6c7, metaT activity for gold:Gp0324040 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-qb8k6k57 +INFO:root:legacy_id: gold:Gp0324043 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-qb8k6k57 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bae64d0b3516a61a22c +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324043 +INFO:root:found 1 records +INFO:root:record: nmdc:fd39dd89961662c57ae767910a1be24b, ReadQC activiity 503568_191746 +INFO:root:PassingDataObject: nmdc:434f2aeca2050738e809b64779d3200b +INFO:root:PassingDataObject: nmdc:26a90b45998a3ac9ba4e93997f7dc6f0 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324043 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324043 +INFO:root:found 1 records +INFO:root:record: nmdc:adbf503374bf6e579d9be19348b96dd5, Metagenome assembly 503568_191746 +WARNING:root:DataObjectNoType: nmdc:7dbb25f3ed7eb1785f0dc81841933967 +WARNING:root:DataObjectNoType: nmdc:1b75652bda47161a8fee86da0154c9b8 +WARNING:root:DataObjectNoType: nmdc:9dd7ee30cd715b88c4651f376c1a7634 +WARNING:root:DataObjectNoType: nmdc:70a770c1df5fbf45629c1b68870847cf +WARNING:root:DataObjectNoType: nmdc:9c0df326052c314b82f83291af07a5d7 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324043 +INFO:root:found 1 records +INFO:root:record: nmdc:dbce99ec57e05f3ff39af0223e3dbfee, MetagenomeAnnotation activity for gold:Gp0324043 +INFO:root:PassingDataObject: nmdc:c557e07059a8da7a6aa8d57ae96f02ea +INFO:root:PassingDataObject: nmdc:b033e7fbd2045df551160b6942586a27 +INFO:root:PassingDataObject: nmdc:69a5be2f025ea1e56a16b6ce3e5c25a2 +INFO:root:PassingDataObject: nmdc:97cbc414ea5cf62c13026356f14b3db1 +INFO:root:PassingDataObject: nmdc:1a83ec15121ab3db6b225fcb22c9f1f6 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324043 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324043 +INFO:root:found 1 records +INFO:root:record: nmdc:49604d2dc699750601a836e3a1ba7dea, metaT activity for gold:Gp0324043 +ERROR:root:DataObjectNotFound nmdc:61f06a2309788ded26b1fdec53ca3791 for nmdc:metaT/nmdc:49604d2dc699750601a836e3a1ba7dea +ERROR:root:FailedDataObject: nmdc:b534e57b07bd7cb373902e137f53ecbf, +ERROR:root:FailedDataObject: nmdc:f9d892caa520b5e95fbb380005132b38, +ERROR:root:FailedDataObject: nmdc:5efbf445fa5911b90c439c6762608c62, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:49604d2dc699750601a836e3a1ba7dea, metaT activity for gold:Gp0324043 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-54pp5g62 +INFO:root:legacy_id: gold:Gp0324044 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-54pp5g62 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bb464d0b3516a61a22f +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324044 +INFO:root:found 1 records +INFO:root:record: nmdc:555d3b0753bdca997d7cb0c540f33916, ReadQC activiity 503568_191747 +INFO:root:PassingDataObject: nmdc:2b41779af6652f18feafe5141d17e9cf +INFO:root:PassingDataObject: nmdc:88ed5f4e51589f2602c0601995afe84e +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324044 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324044 +INFO:root:found 1 records +INFO:root:record: nmdc:dd138d54b03aacb299ca44e560853758, Metagenome assembly 503568_191747 +WARNING:root:DataObjectNoType: nmdc:ad5ec8f0ae2136ce2ede1d778ff454e6 +WARNING:root:DataObjectNoType: nmdc:9819174cfbfec80593ae2e38cee69195 +WARNING:root:DataObjectNoType: nmdc:edee4dfb75acc9bfc836a5858db0b0c6 +WARNING:root:DataObjectNoType: nmdc:d7f76f9e1ad98997537bcd69130ecff9 +WARNING:root:DataObjectNoType: nmdc:e6c20f2813ece93c8954df0fac2d139f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324044 +INFO:root:found 1 records +INFO:root:record: nmdc:0e9fb1e720caf88f61ab8bc4d866af7e, MetagenomeAnnotation activity for gold:Gp0324044 +INFO:root:PassingDataObject: nmdc:50f2fe8d10b7f498c092ad58d84566e9 +INFO:root:PassingDataObject: nmdc:2ac6dc3b3e885520db0e4604c641cde3 +INFO:root:PassingDataObject: nmdc:1aa4f17a80bf5f1783b044261bd0122e +INFO:root:PassingDataObject: nmdc:a17065ca9209cb2774e2364c6d4a4e09 +INFO:root:PassingDataObject: nmdc:6d6bc7279ced7706d60024621e3bd32f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324044 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324044 +INFO:root:found 1 records +INFO:root:record: nmdc:907923dbfcf87f9b05df0162bd1e3152, metaT activity for gold:Gp0324044 +ERROR:root:DataObjectNotFound nmdc:6a455b07be6e9c6b3f0631858a8ade17 for nmdc:metaT/nmdc:907923dbfcf87f9b05df0162bd1e3152 +ERROR:root:FailedDataObject: nmdc:3b196dcf0807861e7346e3a26f7fa4ee, +ERROR:root:FailedDataObject: nmdc:b607e4866c60542397ea2b637a9f031b, +ERROR:root:FailedDataObject: nmdc:3b956715f694921287c5533cf4802e8c, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:907923dbfcf87f9b05df0162bd1e3152, metaT activity for gold:Gp0324044 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-q1m33136 +INFO:root:legacy_id: gold:Gp0324042 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-q1m33136 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8baa64d0b3516a61a22b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324042 +INFO:root:found 1 records +INFO:root:record: nmdc:b7e29afb4d2575fbf70527a41d22ab7b, ReadQC activiity 503568_191745 +INFO:root:PassingDataObject: nmdc:a65add357395ca8433c08fecad9297f6 +INFO:root:PassingDataObject: nmdc:a02787332022facbb7f663f88cfdf367 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324042 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324042 +INFO:root:found 1 records +INFO:root:record: nmdc:beb826db975148e406586105d7e270dc, Metagenome assembly 503568_191745 +WARNING:root:DataObjectNoType: nmdc:27b4fc3afc62695a96592db68194d2aa +WARNING:root:DataObjectNoType: nmdc:d67e644ac9693e35eaaf159b30218d11 +WARNING:root:DataObjectNoType: nmdc:6a9a89d3b76a414bdf2ac0c08efe4c51 +WARNING:root:DataObjectNoType: nmdc:84dd3b580584c7a430e8adfa94ce14e5 +WARNING:root:DataObjectNoType: nmdc:3e2e66e31dbf9927f4e80507c8e98543 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324042 +INFO:root:found 1 records +INFO:root:record: nmdc:7a119c050961e0618c731187dba892a5, MetagenomeAnnotation activity for gold:Gp0324042 +INFO:root:PassingDataObject: nmdc:2dd870d4df455dc1fc4b7681504dfa6c +INFO:root:PassingDataObject: nmdc:dd8a222d4fa547d717ec4e9f6582271e +INFO:root:PassingDataObject: nmdc:b605373b106a2e3536c62e37813d7547 +INFO:root:PassingDataObject: nmdc:cf03768bfe35b748b30dd92ab266a64c +INFO:root:PassingDataObject: nmdc:3a18fc8c9a7e618481aaadd42d48b13d +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324042 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324042 +INFO:root:found 1 records +INFO:root:record: nmdc:c3ef1ce6d3da9d6161bf4a50a4d6ce38, metaT activity for gold:Gp0324042 +INFO:root:PassingDataObject: nmdc:137797610e93dae8787f5a95bbb76571 +ERROR:root:DataObjectNotFound nmdc:88c54f9cd321218cfecdd844c999f402 for nmdc:metaT/nmdc:c3ef1ce6d3da9d6161bf4a50a4d6ce38 +ERROR:root:FailedDataObject: nmdc:8d9889a5848d9af49f1aceb3db9c6790, +ERROR:root:FailedDataObject: nmdc:32ba8f83e4f963be68b1aa49131884a8, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c3ef1ce6d3da9d6161bf4a50a4d6ce38, metaT activity for gold:Gp0324042 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-gdddv135 +INFO:root:legacy_id: gold:Gp0324045 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-gdddv135 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bb964d0b3516a61a231 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324045 +INFO:root:found 1 records +INFO:root:record: nmdc:a855129edd2fa9fae21cea66b2bcf346, ReadQC activiity 503568_191748 +INFO:root:PassingDataObject: nmdc:67e1af2be5c16d6500e510c3cb596cdd +INFO:root:PassingDataObject: nmdc:cfcbae7f3178a0cf9d39e7b030a962eb +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324045 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324045 +INFO:root:found 1 records +INFO:root:record: nmdc:9585a4f0c0e772b63998da73c5e26917, Metagenome assembly 503568_191748 +WARNING:root:DataObjectNoType: nmdc:4586ed365a05185c8238317e025b0c6b +WARNING:root:DataObjectNoType: nmdc:149d662e1c5975a5a32a757bc1b08001 +WARNING:root:DataObjectNoType: nmdc:7f2287c2564a46a7bf59f7c3a4373ec4 +WARNING:root:DataObjectNoType: nmdc:ec78aa5f7e361f7a40956f5e2d6e81c7 +WARNING:root:DataObjectNoType: nmdc:0e5bdd198c064009f501495de8bb4418 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324045 +INFO:root:found 0 records +INFO:root:set_name: mags_activity_set for gold:Gp0324045 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324045 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-3c97ej85 +INFO:root:legacy_id: gold:Gp0324047 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-3c97ej85 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bc364d0b3516a61a235 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324047 +INFO:root:found 1 records +INFO:root:record: nmdc:daacfefed701b052ae1b5aee3fa84a33, ReadQC activiity 503568_191750 +INFO:root:PassingDataObject: nmdc:f5b40a411a6ed0665d024e3fddce1cb2 +INFO:root:PassingDataObject: nmdc:fd85e2c1aabfb9ac7d9dde3e05570e76 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324047 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324047 +INFO:root:found 1 records +INFO:root:record: nmdc:e2908695c9e19027f9d346c7a471b557, Metagenome assembly 503568_191750 +WARNING:root:DataObjectNoType: nmdc:8851782e4852b0f4868bad7275ecf38b +WARNING:root:DataObjectNoType: nmdc:4fead0513bc16eff462330c6d0e0650d +WARNING:root:DataObjectNoType: nmdc:ee8a4203c48863ab244adaf5b7226507 +WARNING:root:DataObjectNoType: nmdc:e5f2d24367235552f43a880e118ed1bc +WARNING:root:DataObjectNoType: nmdc:df3a21c2ad3861ec183f8dfb9fa84cde +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324047 +INFO:root:found 1 records +INFO:root:record: nmdc:f19f53cba21dcecfd7c8fc0feac2277c, MetagenomeAnnotation activity for gold:Gp0324047 +INFO:root:PassingDataObject: nmdc:ef5eac2c523132919b615b870f6b3f9f +INFO:root:PassingDataObject: nmdc:fdaededc1d74fb2e9504f774ee86d6f8 +INFO:root:PassingDataObject: nmdc:419c3b17f2b6512b8d1d576c783d75c3 +INFO:root:PassingDataObject: nmdc:14e3487aac29a000ebb6d33360670be1 +INFO:root:PassingDataObject: nmdc:5361078cf9266919c57cfc2e88b1618c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324047 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324047 +INFO:root:found 1 records +INFO:root:record: nmdc:22aa0822c84f3d434517336c90a9454a, metaT activity for gold:Gp0324047 +INFO:root:PassingDataObject: nmdc:539709d14dd219803ac41ddeb40b4108 +INFO:root:PassingDataObject: nmdc:06a6e7ced5a389c11ce9b4ce097aa80a +INFO:root:PassingDataObject: nmdc:4dfa358dcf098e2086367df3c5c2f3b1 +ERROR:root:DataObjectNotFound nmdc:957600e89955173435e9b35666e3f1d5 for nmdc:metaT/nmdc:22aa0822c84f3d434517336c90a9454a +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:22aa0822c84f3d434517336c90a9454a, metaT activity for gold:Gp0324047 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-9ym4dz61 +INFO:root:legacy_id: gold:Gp0324048 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9ym4dz61 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bc964d0b3516a61a237 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324048 +INFO:root:found 1 records +INFO:root:record: nmdc:6ce3e46f3932a584072f2f61f5394d99, ReadQC activiity 503568_191751 +INFO:root:PassingDataObject: nmdc:c25a5ef9b3a1dc4c12190be00e3ecd8e +INFO:root:PassingDataObject: nmdc:183ad11a97192d880c301228b52c219c +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324048 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324048 +INFO:root:found 1 records +INFO:root:record: nmdc:b99652c264b39b6df212a5e747b4373f, Metagenome assembly 503568_191751 +WARNING:root:DataObjectNoType: nmdc:c3b93c8e91026fbfedf62434f5e07569 +WARNING:root:DataObjectNoType: nmdc:110848091e3295e82c3906656cdab7d2 +WARNING:root:DataObjectNoType: nmdc:031713e4f9023d7b80bf59ac6455ba78 +WARNING:root:DataObjectNoType: nmdc:cca9165b3f23bf0050cd2933fcece66d +WARNING:root:DataObjectNoType: nmdc:dc860148fbc2b89dbf21f871f085f3d4 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324048 +INFO:root:found 1 records +INFO:root:record: nmdc:ce0717d5f24e153fe33a42fec43b026b, MetagenomeAnnotation activity for gold:Gp0324048 +INFO:root:PassingDataObject: nmdc:633629db03eb4342d40f504000c9d597 +INFO:root:PassingDataObject: nmdc:997e948b917dc597f65c7cbfc32c5487 +INFO:root:PassingDataObject: nmdc:beae090f131c8b2065413fad4ea3f17b +INFO:root:PassingDataObject: nmdc:3ba647f2acf00211fda1b2d34f7ca8a2 +INFO:root:PassingDataObject: nmdc:9872adb5860c3e9e69beeed52fd7bbc0 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324048 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324048 +INFO:root:found 1 records +INFO:root:record: nmdc:cced94486ace30049db6f901c1371c36, metaT activity for gold:Gp0324048 +INFO:root:PassingDataObject: nmdc:37fb25a011219a3f453842671cbc58d6 +INFO:root:PassingDataObject: nmdc:e050b599021abf0172aed3a5012abf81 +ERROR:root:DataObjectNotFound nmdc:8c96c0ddd734b2d7c3355a85fb478727 for nmdc:metaT/nmdc:cced94486ace30049db6f901c1371c36 +ERROR:root:FailedDataObject: nmdc:2cc64ff1380e4d096ba4eab74faeff06, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:cced94486ace30049db6f901c1371c36, metaT activity for gold:Gp0324048 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-rmc37633 +INFO:root:legacy_id: gold:Gp0324041 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-rmc37633 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8ba564d0b3516a61a229 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324041 +INFO:root:found 1 records +INFO:root:record: nmdc:a8b6b7739638ccb123cd2343d1d0f15a, ReadQC activiity 503568_191744 +INFO:root:PassingDataObject: nmdc:7ef4dc1aaa3f4824d1b476cb117cb0ec +INFO:root:PassingDataObject: nmdc:4904c89ca841a0a01c7f3523b972bca2 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324041 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324041 +INFO:root:found 1 records +INFO:root:record: nmdc:fb8b5bed0faee39b3ace4529f753ad6a, Metagenome assembly 503568_191744 +WARNING:root:DataObjectNoType: nmdc:6b46a9e9d3e7fcb56758f156b18b4712 +WARNING:root:DataObjectNoType: nmdc:3af2c3d23f2fa5661d527201742e4470 +WARNING:root:DataObjectNoType: nmdc:dfa4536b8c1c617fbaaa64ad1ca1b45b +WARNING:root:DataObjectNoType: nmdc:3dc75bd74502cbb74932c85d6482ca98 +WARNING:root:DataObjectNoType: nmdc:7d5bf586dd3c371e209533943045bdd8 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324041 +INFO:root:found 1 records +INFO:root:record: nmdc:5c7d758a1ae4be3debf95de04fc0e50b, MetagenomeAnnotation activity for gold:Gp0324041 +INFO:root:PassingDataObject: nmdc:be9f2577bd71dc3c61c3def3d337795c +INFO:root:PassingDataObject: nmdc:952a0d6ab1a7a835c670af6b3a463b83 +INFO:root:PassingDataObject: nmdc:9c5feab6778f85ae38098882b8dd54ee +INFO:root:PassingDataObject: nmdc:a64c8082e9c340b8ad61fb8f6dbc727f +INFO:root:PassingDataObject: nmdc:50249816c1fc21744e57741221f409a9 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324041 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324041 +INFO:root:found 1 records +INFO:root:record: nmdc:6458a1f7a0068045170d96c3a1822f28, metaT activity for gold:Gp0324041 +ERROR:root:DataObjectNotFound nmdc:18b8afd638a9bb80a633f138150b7edd for nmdc:metaT/nmdc:6458a1f7a0068045170d96c3a1822f28 +ERROR:root:FailedDataObject: nmdc:a8f4b128eb3b3838c8f8ab4148f7365f, +ERROR:root:FailedDataObject: nmdc:0e6a65f468ae640a5df0cafc49c5ad02, +ERROR:root:FailedDataObject: nmdc:d3ae400f0200e0e6ed234c1c2c2d3ff2, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:6458a1f7a0068045170d96c3a1822f28, metaT activity for gold:Gp0324041 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-cqfz4c71 +INFO:root:legacy_id: gold:Gp0324050 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-cqfz4c71 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bd164d0b3516a61a23a +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324050 +INFO:root:found 1 records +INFO:root:record: nmdc:216ef45a3fdc36a32c10f89e76debd01, ReadQC activiity 503568_191753 +INFO:root:PassingDataObject: nmdc:c37dabd44eb4db342798f72cf82e2da6 +INFO:root:PassingDataObject: nmdc:4060add18e978ab0b6664c97439e16ea +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324050 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324050 +INFO:root:found 1 records +INFO:root:record: nmdc:d8ff963e0ee3cb92bda5301953c89b5a, Metagenome assembly 503568_191753 +WARNING:root:DataObjectNoType: nmdc:89b215091fffc03897ec9009e93b79a8 +WARNING:root:DataObjectNoType: nmdc:0c80bbab7d405704e1b515d6379465e2 +WARNING:root:DataObjectNoType: nmdc:3e6f8b9d78e6b05e736b99b93b783c17 +WARNING:root:DataObjectNoType: nmdc:c3e6379945c227ccf561367b250802ab +WARNING:root:DataObjectNoType: nmdc:de1dc283fe454d9480313dce58c719b9 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324050 +INFO:root:found 1 records +INFO:root:record: nmdc:6aa6cb8058330eddc3c4ffe2418f96e2, MetagenomeAnnotation activity for gold:Gp0324050 +INFO:root:PassingDataObject: nmdc:8e42161d996537a9c77c7ed0729efd6e +INFO:root:PassingDataObject: nmdc:e2ad7b09ecce86bc9c3733af7c87cff2 +INFO:root:PassingDataObject: nmdc:a0b710db31ab33a55dbbbd640c0efe5f +INFO:root:PassingDataObject: nmdc:7f98b506aa7e320f0a88101050198b79 +INFO:root:PassingDataObject: nmdc:aab01affc56803f5a36175e43f4b43d8 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324050 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324050 +INFO:root:found 1 records +INFO:root:record: nmdc:0b68b5981874783436ecd3461d3672a6, metaT activity for gold:Gp0324050 +INFO:root:PassingDataObject: nmdc:d3650b9a7a8a01ad6023bf7a2b222aa2 +ERROR:root:DataObjectNotFound nmdc:ee594da0ca22271208e72ed9480b9878 for nmdc:metaT/nmdc:0b68b5981874783436ecd3461d3672a6 +ERROR:root:FailedDataObject: nmdc:4d18c6e01982ffea0306606ce840f9fb, +ERROR:root:FailedDataObject: nmdc:1ef396dd78ef4b9fd9cb50723b10fb2c, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:0b68b5981874783436ecd3461d3672a6, metaT activity for gold:Gp0324050 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-4gg8sk49 +INFO:root:legacy_id: gold:Gp0324049 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-4gg8sk49 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bce64d0b3516a61a239 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324049 +INFO:root:found 1 records +INFO:root:record: nmdc:4f25876ce94a12c9bad52bd2d731d839, ReadQC activiity 503568_191752 +INFO:root:PassingDataObject: nmdc:d5e596a5b7fa5c313a2955a7844d9d91 +INFO:root:PassingDataObject: nmdc:0e74871aa86ffc0af516abf110cd7480 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324049 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324049 +INFO:root:found 1 records +INFO:root:record: nmdc:68ddec74b2ef773a4806f4ee3a9c8dde, Metagenome assembly 503568_191752 +WARNING:root:DataObjectNoType: nmdc:ad63bd55d3201033983f9e98d8111c2f +WARNING:root:DataObjectNoType: nmdc:1c0c7de3bdbf7c007173a981be39f441 +WARNING:root:DataObjectNoType: nmdc:fdf2130774a58ccec868d42405af0603 +WARNING:root:DataObjectNoType: nmdc:8a71dd0c56c299520ad8698b24ba81b7 +WARNING:root:DataObjectNoType: nmdc:294455bde51fa45c75177f5b57953aff +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324049 +INFO:root:found 1 records +INFO:root:record: nmdc:63bb43ea7f71db994f4c21b5d2ca7c3e, MetagenomeAnnotation activity for gold:Gp0324049 +INFO:root:PassingDataObject: nmdc:b686e26f402ac333931315d3f3a89d8f +INFO:root:PassingDataObject: nmdc:ce9d4d856d7f6498587ef9a046d63cd6 +INFO:root:PassingDataObject: nmdc:f0b6c9972d6ef9cb56915bbff272f711 +INFO:root:PassingDataObject: nmdc:01b2faabe8d1b375c457f15b9011ca79 +INFO:root:PassingDataObject: nmdc:d01a37a1b3bdf16d02d84ab67a9f052d +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324049 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324049 +INFO:root:found 1 records +INFO:root:record: nmdc:62a2fedbe461262eca0af847b1556b5d, metaT activity for gold:Gp0324049 +ERROR:root:DataObjectNotFound nmdc:fd4e4871caef5352801a0d58b2fc5727 for nmdc:metaT/nmdc:62a2fedbe461262eca0af847b1556b5d +ERROR:root:FailedDataObject: nmdc:7fbd8d476fc8ec0b67c3ca3b8842cf3a, +ERROR:root:FailedDataObject: nmdc:71f86d611030ffbc071a6ce8bcb7a8a9, +ERROR:root:FailedDataObject: nmdc:37f43cc5c09636f2795507a5bc76ecbd, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:62a2fedbe461262eca0af847b1556b5d, metaT activity for gold:Gp0324049 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-rycc3349 +INFO:root:legacy_id: gold:Gp0324053 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-rycc3349 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bdf64d0b3516a61a240 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324053 +INFO:root:found 1 records +INFO:root:record: nmdc:56acd9333204ed4c9254377803d678b7, ReadQC activiity 503568_191756 +INFO:root:PassingDataObject: nmdc:eef5fb567bef95195bcbd2a19cbb112e +INFO:root:PassingDataObject: nmdc:47345a6c015827f45a87656591242767 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324053 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324053 +INFO:root:found 1 records +INFO:root:record: nmdc:b6754664efd3d0292b03ac2d028923db, Metagenome assembly 503568_191756 +WARNING:root:DataObjectNoType: nmdc:dd9960a5f89ba7734c5e78f9ab9e0b81 +WARNING:root:DataObjectNoType: nmdc:1278a177c90be0b0b6a5a114c680cef1 +WARNING:root:DataObjectNoType: nmdc:9a65211bc48a6a1ba42e2eab7f8188a9 +WARNING:root:DataObjectNoType: nmdc:10cc6387932cfae3b8b9bc287ef7ac7b +WARNING:root:DataObjectNoType: nmdc:fecf4928adad0e006e5f01003202ebdb +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324053 +INFO:root:found 1 records +INFO:root:record: nmdc:cf6b096e809a5e4c4718da5553686651, MetagenomeAnnotation activity for gold:Gp0324053 +INFO:root:PassingDataObject: nmdc:5695b4f28947879af29316a50f55e3fb +INFO:root:PassingDataObject: nmdc:43683c7286654719cbb1c49fe8fa711d +INFO:root:PassingDataObject: nmdc:371f0191548ed9b7eb797d3b0c14e7a5 +INFO:root:PassingDataObject: nmdc:e146ddbd123fc8cba5a781d0af1097ec +INFO:root:PassingDataObject: nmdc:65fc306b77a0d8ba9d7c7d657ee59ada +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324053 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324053 +INFO:root:found 1 records +INFO:root:record: nmdc:2d7c075332d5f2295437b76f00f5f7d1, metaT activity for gold:Gp0324053 +INFO:root:PassingDataObject: nmdc:9ead1d11cc61d29abc7c45bb1b05824d +ERROR:root:DataObjectNotFound nmdc:753162645bb37b64f3ef9c0b2ca8a935 for nmdc:metaT/nmdc:2d7c075332d5f2295437b76f00f5f7d1 +ERROR:root:FailedDataObject: nmdc:164b60e63f42c254a63ab4fdcc99655f, +ERROR:root:FailedDataObject: nmdc:1e9af9e1ba511b86afd37c1675d4ba55, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:2d7c075332d5f2295437b76f00f5f7d1, metaT activity for gold:Gp0324053 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-38taxr04 +INFO:root:legacy_id: gold:Gp0324046 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-38taxr04 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bbe64d0b3516a61a233 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324046 +INFO:root:found 1 records +INFO:root:record: nmdc:98c40a2c7890fcff3272021067b6673e, ReadQC activiity 503568_191749 +INFO:root:PassingDataObject: nmdc:7a02186d6f24d4dfa94c7ca9820e9dfb +INFO:root:PassingDataObject: nmdc:69fd8c4b73dfb999f0d4cd16577109dc +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324046 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324046 +INFO:root:found 1 records +INFO:root:record: nmdc:504fbd42e87fcd5f7276744194a896a7, Metagenome assembly 503568_191749 +WARNING:root:DataObjectNoType: nmdc:6de5b284342486e714e40f1cfc7f35a5 +WARNING:root:DataObjectNoType: nmdc:0e4b5066e3f5fcdbe358a45b7e5ddafa +WARNING:root:DataObjectNoType: nmdc:f376b01d23b7d97241b5df495bf3195c +WARNING:root:DataObjectNoType: nmdc:f0bde2bed8ace76941cb0866ea7dc4f9 +WARNING:root:DataObjectNoType: nmdc:ece367e98508e74a453eba76019fa7ae +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324046 +INFO:root:found 1 records +INFO:root:record: nmdc:a1447564a93994425b47569f4110dce3, MetagenomeAnnotation activity for gold:Gp0324046 +INFO:root:PassingDataObject: nmdc:dfab56b4779d1cb8f54656c849f4f2d0 +INFO:root:PassingDataObject: nmdc:4533d67411b40c56cc39da255c8b3fc9 +INFO:root:PassingDataObject: nmdc:49968eed1d5559cc564de756381442a6 +INFO:root:PassingDataObject: nmdc:0b939e0987350f56d9365135df0a2757 +INFO:root:PassingDataObject: nmdc:caa2bd7468ff18859cd3cdcf49f90c3c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324046 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324046 +INFO:root:found 1 records +INFO:root:record: nmdc:ed88ffb0233fb3e49d716bb9112ed1d8, metaT activity for gold:Gp0324046 +INFO:root:PassingDataObject: nmdc:d124eb879d069373638ba78a03bc0ebe +INFO:root:PassingDataObject: nmdc:d7bee0c012323e13610c9ede8025e5f5 +INFO:root:PassingDataObject: nmdc:9ff8854c13f3b7a079492549943b6df2 +ERROR:root:DataObjectNotFound nmdc:b8f11f271313ebce716edfe8a9650118 for nmdc:metaT/nmdc:ed88ffb0233fb3e49d716bb9112ed1d8 +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ed88ffb0233fb3e49d716bb9112ed1d8, metaT activity for gold:Gp0324046 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-vxewmh98 +INFO:root:legacy_id: gold:Gp0324052 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-vxewmh98 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bdc64d0b3516a61a23f +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324052 +INFO:root:found 1 records +INFO:root:record: nmdc:695724b197e152816b63c489bf984b3f, ReadQC activiity 503568_191755 +INFO:root:PassingDataObject: nmdc:ccfd1fdd8f0d4d0779f27c51d3c9b594 +INFO:root:PassingDataObject: nmdc:db15c86771458bb583b21591f0ba09c7 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324052 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324052 +INFO:root:found 1 records +INFO:root:record: nmdc:20d65d6d9d39a355512f06d0ce237749, Metagenome assembly 503568_191755 +WARNING:root:DataObjectNoType: nmdc:67239d071633720171910856bd875bae +WARNING:root:DataObjectNoType: nmdc:86191210e25502a0d378be8df604bac3 +WARNING:root:DataObjectNoType: nmdc:5801824d99e5ec427971d3f02a4a819c +WARNING:root:DataObjectNoType: nmdc:8c74875400af4d8568fd797aa86bbdc5 +WARNING:root:DataObjectNoType: nmdc:2963d59ff12f2003dde0a15ea10c621d +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324052 +INFO:root:found 1 records +INFO:root:record: nmdc:530593ca6433c5a14a82f66f99837e84, MetagenomeAnnotation activity for gold:Gp0324052 +INFO:root:PassingDataObject: nmdc:1774e46fe93cd929a5ae5cf214c58dad +INFO:root:PassingDataObject: nmdc:183f22446c85d3f0a2b232ef56224b03 +INFO:root:PassingDataObject: nmdc:9c5ae627743f16fd3d07eb7f03f33587 +INFO:root:PassingDataObject: nmdc:12f06d2df9975569fe59847e7bf9756c +INFO:root:PassingDataObject: nmdc:0b215114120e6e19bf5e0dce8fd0dc3d +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324052 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324052 +INFO:root:found 1 records +INFO:root:record: nmdc:369043425a2ce67674644d6044224451, metaT activity for gold:Gp0324052 +INFO:root:PassingDataObject: nmdc:8d37e1afe8f5adcdca4359d8ec9ada44 +ERROR:root:DataObjectNotFound nmdc:03c49b063726126a4526bc96c3f03078 for nmdc:metaT/nmdc:369043425a2ce67674644d6044224451 +ERROR:root:FailedDataObject: nmdc:f7373922ee4981e36eb86e3acd77ff68, +ERROR:root:FailedDataObject: nmdc:dec3a65cd3d543a85c5a87f544215ed2, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:369043425a2ce67674644d6044224451, metaT activity for gold:Gp0324052 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-m49gbh37 +INFO:root:legacy_id: gold:Gp0324051 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-m49gbh37 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bd764d0b3516a61a23d +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324051 +INFO:root:found 1 records +INFO:root:record: nmdc:ea478edd232f5bd066dc54a175c9db49, ReadQC activiity 503568_191754 +INFO:root:PassingDataObject: nmdc:e3f23c7c70b18abadd1e5dd400ed36cd +INFO:root:PassingDataObject: nmdc:89ce36fa444f33b2caafb354978d917f +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324051 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324051 +INFO:root:found 1 records +INFO:root:record: nmdc:0acdb761a0621771b319654b99f9b780, Metagenome assembly 503568_191754 +WARNING:root:DataObjectNoType: nmdc:2d1949010d1ed5e834473e38330ae8ac +WARNING:root:DataObjectNoType: nmdc:f2250787d5898bf0a5799ec5a53b847c +WARNING:root:DataObjectNoType: nmdc:73187ea143816c4ad5e17313448d7603 +WARNING:root:DataObjectNoType: nmdc:b08e4335f8157089c87ac7707df8b21b +WARNING:root:DataObjectNoType: nmdc:a6a23993a918fd288c1f8f0f6e84c2e9 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324051 +INFO:root:found 1 records +INFO:root:record: nmdc:51880e32d7564747a46f00854e071d32, MetagenomeAnnotation activity for gold:Gp0324051 +INFO:root:PassingDataObject: nmdc:bbc9d4625db044c14edcfee2f44e2192 +INFO:root:PassingDataObject: nmdc:872059b4891bd553927fe13283b43506 +INFO:root:PassingDataObject: nmdc:54971a8537769c42292f244f87104fe1 +INFO:root:PassingDataObject: nmdc:a902d37dbd3acad785ee6847d3b0f772 +INFO:root:PassingDataObject: nmdc:cee211856400b7116369a4e97a7ca4d6 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324051 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324051 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-3g2hs408 +INFO:root:legacy_id: gold:Gp0324055 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-3g2hs408 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8be964d0b3516a61a244 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324055 +INFO:root:found 1 records +INFO:root:record: nmdc:3e2e7c2bba68dd1ff32c875a35bef0da, ReadQC activiity 503568_191758 +INFO:root:PassingDataObject: nmdc:9452a4e78c3e6eedc2bc8b6b05587e9d +INFO:root:PassingDataObject: nmdc:e2600f322469e8667daa1a904a15b771 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324055 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324055 +INFO:root:found 1 records +INFO:root:record: nmdc:75f338a8ba040d01db3ea0ad9fb5b4d6, Metagenome assembly 503568_191758 +WARNING:root:DataObjectNoType: nmdc:c0d3ebc25dbfa41c7f01e534979a67f5 +WARNING:root:DataObjectNoType: nmdc:d0b457b6f23087ba2af0d1532fcd79a8 +WARNING:root:DataObjectNoType: nmdc:03cc36d770b32dde82a981b677c7a63c +WARNING:root:DataObjectNoType: nmdc:e2ba41fb408b6709f8e61501d651c5f1 +WARNING:root:DataObjectNoType: nmdc:911ca34ba7f516b55bc0b5f59538ac28 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324055 +INFO:root:found 1 records +INFO:root:record: nmdc:f863d392fcda8b1873b80168a1d672ba, MetagenomeAnnotation activity for gold:Gp0324055 +INFO:root:PassingDataObject: nmdc:db2e8de7613a9fc24b59d55b65b76a7b +INFO:root:PassingDataObject: nmdc:fe8e8f652452823d466e6198f6e5ac66 +INFO:root:PassingDataObject: nmdc:8ddf389ecdaffafdf83eb22204d72f38 +INFO:root:PassingDataObject: nmdc:eb8565f79544e81203e294799ae709d6 +INFO:root:PassingDataObject: nmdc:8daeb8ef362ab311549165a8bd41a96f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324055 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324055 +INFO:root:found 1 records +INFO:root:record: nmdc:754f813286cac3165f48ebe691dabc3e, metaT activity for gold:Gp0324055 +INFO:root:PassingDataObject: nmdc:cc13850e8afff115fc6d3056449e594e +INFO:root:PassingDataObject: nmdc:9ea222fd87108806d2047631faeae912 +ERROR:root:DataObjectNotFound nmdc:157f619acb8d1af497dbd311bb0129e0 for nmdc:metaT/nmdc:754f813286cac3165f48ebe691dabc3e +ERROR:root:FailedDataObject: nmdc:9eadb698377605a1b0d99a54fc970019, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:754f813286cac3165f48ebe691dabc3e, metaT activity for gold:Gp0324055 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-bk19ns13 +INFO:root:legacy_id: gold:Gp0324056 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-bk19ns13 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bef64d0b3516a61a247 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324056 +INFO:root:found 1 records +INFO:root:record: nmdc:13d2f00b60a6beec4033b63068ddb179, ReadQC activiity 503568_191759 +INFO:root:PassingDataObject: nmdc:feb9d011f3831a80ef2e843030ce9e4d +INFO:root:PassingDataObject: nmdc:2119bed382f4c9c304c4bf20810b4279 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324056 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324056 +INFO:root:found 1 records +INFO:root:record: nmdc:8a16344473cbd5ada06b85d06f6e414d, Metagenome assembly 503568_191759 +WARNING:root:DataObjectNoType: nmdc:da6e9a6548574c61dc0163b12adc5061 +WARNING:root:DataObjectNoType: nmdc:13c6ceef56bd4ad1113edcb9c3698e88 +WARNING:root:DataObjectNoType: nmdc:8ce8a1c8ae9e48bec3addb3323d4082d +WARNING:root:DataObjectNoType: nmdc:777104338c5abff4f7569c10b4f4d9a9 +WARNING:root:DataObjectNoType: nmdc:ecc9b29d5a7e4270390c638e0640750f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324056 +INFO:root:found 1 records +INFO:root:record: nmdc:4113345e630c2a4c9a3d535982a3480b, MetagenomeAnnotation activity for gold:Gp0324056 +INFO:root:PassingDataObject: nmdc:91ab0390e293e8cea5fb2264f5ebac6f +INFO:root:PassingDataObject: nmdc:611653391b749b6c05e59c6cd3795e17 +INFO:root:PassingDataObject: nmdc:bbadddd97ebb8f87cc13f21bcc09a370 +INFO:root:PassingDataObject: nmdc:c2f611ba596a34915c458df3290984bb +INFO:root:PassingDataObject: nmdc:1370f93f1cf8c5982c5c12a5977096ee +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324056 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324056 +INFO:root:found 1 records +INFO:root:record: nmdc:47f893a6cc06ce197ef0822061012f97, metaT activity for gold:Gp0324056 +ERROR:root:DataObjectNotFound nmdc:44c38f11b62931b22a3e38e44e12a99b for nmdc:metaT/nmdc:47f893a6cc06ce197ef0822061012f97 +ERROR:root:FailedDataObject: nmdc:e694e67f1b18f928c0b07cc9b36f91be, +ERROR:root:FailedDataObject: nmdc:68edf1160874fbfb685cf9c76f11fe5d, +ERROR:root:FailedDataObject: nmdc:e97dec3a31cb394a99c30b1da954f626, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:47f893a6cc06ce197ef0822061012f97, metaT activity for gold:Gp0324056 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-1gn83433 +INFO:root:legacy_id: gold:Gp0324054 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-1gn83433 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8be664d0b3516a61a243 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324054 +INFO:root:found 1 records +INFO:root:record: nmdc:3af3c840ff514f99b157e79cc81c9135, ReadQC activiity 503568_191757 +INFO:root:PassingDataObject: nmdc:d8573ab5a0a68c16543102c43b47ca94 +INFO:root:PassingDataObject: nmdc:32e4910a249e01edd3e4670ce0e19470 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324054 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324054 +INFO:root:found 1 records +INFO:root:record: nmdc:29ee749c0b3d705a90bec6709c296e3c, Metagenome assembly 503568_191757 +WARNING:root:DataObjectNoType: nmdc:21553a87efe28fb65d682af850aa6f31 +WARNING:root:DataObjectNoType: nmdc:fa2198bb898558ecbab4cd426c4f08fd +WARNING:root:DataObjectNoType: nmdc:e1656e0537d95fcc443e542c45dd7a47 +WARNING:root:DataObjectNoType: nmdc:6a0c9293b5a4cbce01b8d10dd32cd197 +WARNING:root:DataObjectNoType: nmdc:f9f3c59ac243fdc9e330e28c26d35994 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324054 +INFO:root:found 1 records +INFO:root:record: nmdc:adef6b4b4874adb135620a21f27a53b6, MetagenomeAnnotation activity for gold:Gp0324054 +INFO:root:PassingDataObject: nmdc:cc7859b3ee994f3cbc5c7e9ab6876324 +INFO:root:PassingDataObject: nmdc:8e3eddd4ab30ae055ff20fa5eb71c9f8 +INFO:root:PassingDataObject: nmdc:fefcf82d506ef330e0ec767e725d7638 +INFO:root:PassingDataObject: nmdc:4aa24f9ddca440ca76d7f98760e220f3 +INFO:root:PassingDataObject: nmdc:8f1d7914beb2975a975267e443e43912 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324054 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324054 +INFO:root:found 1 records +INFO:root:record: nmdc:76440cfb52c9d3791940661e863c5fa6, metaT activity for gold:Gp0324054 +INFO:root:PassingDataObject: nmdc:b38bd06bcee8747b8f52c5985eac3924 +INFO:root:PassingDataObject: nmdc:a6f9b634e52b67769b6c3c8a5bc51d71 +ERROR:root:DataObjectNotFound nmdc:1f02bef68a0a71ecbb325dfdbff6ae85 for nmdc:metaT/nmdc:76440cfb52c9d3791940661e863c5fa6 +ERROR:root:FailedDataObject: nmdc:6e165708348ccf28ca469f662c29b2b0, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:76440cfb52c9d3791940661e863c5fa6, metaT activity for gold:Gp0324054 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-wtzqsw15 +INFO:root:legacy_id: gold:Gp0324059 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-wtzqsw15 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bfc64d0b3516a61a24c +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324059 +INFO:root:found 1 records +INFO:root:record: nmdc:20ade622f987f520fecb2d07a2da6e67, ReadQC activiity 503568_191762 +INFO:root:PassingDataObject: nmdc:99b2c42a6649805c49683822932b76e1 +INFO:root:PassingDataObject: nmdc:7d38ae2a215bf40d52aa845959348a99 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324059 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324059 +INFO:root:found 1 records +INFO:root:record: nmdc:57488f80e6938fa6a853cee697c92bdc, Metagenome assembly 503568_191762 +WARNING:root:DataObjectNoType: nmdc:54ce90d9ca1b5ad9e24f21fea7c46443 +WARNING:root:DataObjectNoType: nmdc:08e4c99d859e9daaa15b66ea4e3177b9 +WARNING:root:DataObjectNoType: nmdc:3d935aea413d28fddd9d9ff67cbf9c0f +WARNING:root:DataObjectNoType: nmdc:29d38c4844246be99bfb4b2713e4c2fd +WARNING:root:DataObjectNoType: nmdc:f64cd9b65a09ea7074b1356fcd73640a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324059 +INFO:root:found 1 records +INFO:root:record: nmdc:7ef7c51072a8fa8151571ab602d54277, MetagenomeAnnotation activity for gold:Gp0324059 +INFO:root:PassingDataObject: nmdc:2e547b0f61597dac0e51f62699d5cfba +INFO:root:PassingDataObject: nmdc:7f1f6684c41c6b0bed9943371f7777b9 +INFO:root:PassingDataObject: nmdc:78196ff5b8b03ac2deab6e8d75519c8b +INFO:root:PassingDataObject: nmdc:d0d420fa8701b9f061c3701c0d89e4af +INFO:root:PassingDataObject: nmdc:c86c1198ba66b4f574a7d6ca08116a3a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324059 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324059 +INFO:root:found 1 records +INFO:root:record: nmdc:88082b5b0ed9f0b43de674babd0f10d6, metaT activity for gold:Gp0324059 +INFO:root:PassingDataObject: nmdc:1bed2bac22376f844f85c589df6330f6 +INFO:root:PassingDataObject: nmdc:4cd6f9a54b05dd7a4cb70d0536557aee +ERROR:root:DataObjectNotFound nmdc:0114daea61986c6cf6290657d1fa8ee0 for nmdc:metaT/nmdc:88082b5b0ed9f0b43de674babd0f10d6 +ERROR:root:FailedDataObject: nmdc:604fe881370c675322fec1dd45016d17, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:88082b5b0ed9f0b43de674babd0f10d6, metaT activity for gold:Gp0324059 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-jy9db676 +INFO:root:legacy_id: gold:Gp0324060 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-jy9db676 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8c0064d0b3516a61a24e +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324060 +INFO:root:found 1 records +INFO:root:record: nmdc:a7b1f820fe719752a8cf5c72b4e4f742, ReadQC activiity 503568_191763 +INFO:root:PassingDataObject: nmdc:02a5e8107640a6e542ee6f68f390ef6e +INFO:root:PassingDataObject: nmdc:37ee3dfe0f51743d9f88cbc572c48da8 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324060 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324060 +INFO:root:found 1 records +INFO:root:record: nmdc:b2fc252cbbf188163f4f11cb479d806a, Metagenome assembly 503568_191763 +WARNING:root:DataObjectNoType: nmdc:a02fc96a13be3a6c68a17c5562041390 +WARNING:root:DataObjectNoType: nmdc:cf0dc62aaaed64dc46bf4ccf489231aa +WARNING:root:DataObjectNoType: nmdc:32bd77df400ddb10ae15a03e9cfb16db +WARNING:root:DataObjectNoType: nmdc:911eb027155fe1fdf6bddc4c9230093f +WARNING:root:DataObjectNoType: nmdc:14d6a0d411348b0ee3d86af4dd4427ee +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324060 +INFO:root:found 1 records +INFO:root:record: nmdc:200022c0672deff53cda040fee54b9e6, MetagenomeAnnotation activity for gold:Gp0324060 +INFO:root:PassingDataObject: nmdc:ffe2cecca5ef75ef1e203136d3ff4e22 +INFO:root:PassingDataObject: nmdc:ba157a1192b357ce12cde03add87da1a +INFO:root:PassingDataObject: nmdc:a69b8eb3359923800442f56798098d2b +INFO:root:PassingDataObject: nmdc:e1f5e368f8cfe9409a50d2da9a862b76 +INFO:root:PassingDataObject: nmdc:0acdb269f2e35fc19dc6623988088dc1 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324060 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324060 +INFO:root:found 1 records +INFO:root:record: nmdc:bd9a4ddd68d17d1f0ed9342c525bbba6, metaT activity for gold:Gp0324060 +ERROR:root:DataObjectNotFound nmdc:376cc399590f368eaf5a486087750077 for nmdc:metaT/nmdc:bd9a4ddd68d17d1f0ed9342c525bbba6 +ERROR:root:FailedDataObject: nmdc:d6715b7b4258e8b77abbec69efe8c8d4, +ERROR:root:FailedDataObject: nmdc:cb1a5c7b585d25c721b79bd21acba9a9, +ERROR:root:FailedDataObject: nmdc:c6b2c8c679508df3a43f2ab829c206c0, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:bd9a4ddd68d17d1f0ed9342c525bbba6, metaT activity for gold:Gp0324060 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-b8tcxf46 +INFO:root:legacy_id: gold:Gp0324061 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-b8tcxf46 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8c0864d0b3516a61a251 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324061 +INFO:root:found 1 records +INFO:root:record: nmdc:a7747cfa4054dfca8863a3ab1c4cc174, ReadQC activiity 503568_191764 +INFO:root:PassingDataObject: nmdc:c7c929f097d2de47f35a1a6c20872d8f +INFO:root:PassingDataObject: nmdc:81cb2f5d9af61933dcc6afba454e57b1 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324061 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324061 +INFO:root:found 1 records +INFO:root:record: nmdc:8b5db3240d4d5694f78fbcd624fb5cb9, Metagenome assembly 503568_191764 +WARNING:root:DataObjectNoType: nmdc:f10e4d0e543cc3f6477f5a750d627501 +WARNING:root:DataObjectNoType: nmdc:81f33bc4b2d086a86b06b91e34a6c066 +WARNING:root:DataObjectNoType: nmdc:8fd2759064bedca385eb1e5fe12f6559 +WARNING:root:DataObjectNoType: nmdc:1004a33015f193c4c500b40050c54e9e +WARNING:root:DataObjectNoType: nmdc:34a0679281aea62f772a0b12baf9e907 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324061 +INFO:root:found 1 records +INFO:root:record: nmdc:c53e4c651cfd13ad8183925a92d7023a, MetagenomeAnnotation activity for gold:Gp0324061 +INFO:root:PassingDataObject: nmdc:a6125f92c019869f91db3fb3b391111b +INFO:root:PassingDataObject: nmdc:26c6058cecc6c33e5e3f016d4475af9c +INFO:root:PassingDataObject: nmdc:d80eb6ef8e06ec5c10bcfb1ce8e6efff +INFO:root:PassingDataObject: nmdc:1904545ceccf591c4b726313109faa23 +INFO:root:PassingDataObject: nmdc:8097135b92d595309add1c512676ebbe +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324061 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324061 +INFO:root:found 1 records +INFO:root:record: nmdc:cb247b6ae27ec683e88f2e569f6817fc, metaT activity for gold:Gp0324061 +ERROR:root:DataObjectNotFound nmdc:565eb354afc5db4ed502bb6dece91d03 for nmdc:metaT/nmdc:cb247b6ae27ec683e88f2e569f6817fc +ERROR:root:FailedDataObject: nmdc:94b2d9e60b8db3564018bc28cb3dd344, +ERROR:root:FailedDataObject: nmdc:38f5ce7db8f640f6b70fa4f66bb7361f, +ERROR:root:FailedDataObject: nmdc:4360bc446b7babf20a2258fc61dcab21, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:cb247b6ae27ec683e88f2e569f6817fc, metaT activity for gold:Gp0324061 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-c5b9k496 +INFO:root:legacy_id: gold:Gp0324057 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-c5b9k496 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bf464d0b3516a61a249 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324057 +INFO:root:found 1 records +INFO:root:record: nmdc:ab94297003af8d13ca6538edf6b327c2, ReadQC activiity 503568_191760 +INFO:root:PassingDataObject: nmdc:deaf1f2930377681eefa93fbdcbf3fdf +INFO:root:PassingDataObject: nmdc:d57e80a629cce6887e2a77e06198b5d3 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324057 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324057 +INFO:root:found 1 records +INFO:root:record: nmdc:41642708ea5ec56d2636e443e0783e20, Metagenome assembly 503568_191760 +WARNING:root:DataObjectNoType: nmdc:42f6277e3f6ca9a6326de910f098019a +WARNING:root:DataObjectNoType: nmdc:0b23098c708c4e4549942ad1f8a3609a +WARNING:root:DataObjectNoType: nmdc:96ea6adace22e916cb0ce4cc9b0da2d2 +WARNING:root:DataObjectNoType: nmdc:295d3d3937adaa8229779ba500f15a45 +WARNING:root:DataObjectNoType: nmdc:552764cc1f91ff0cf6a216bfa16574ca +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324057 +INFO:root:found 1 records +INFO:root:record: nmdc:c64ec801a3898b29fa68eb83a23f18c9, MetagenomeAnnotation activity for gold:Gp0324057 +INFO:root:PassingDataObject: nmdc:9b555749f7b31e926bbd12952d0addac +INFO:root:PassingDataObject: nmdc:fcadcdaf782a75fcab43e367d0e87e52 +INFO:root:PassingDataObject: nmdc:74f9b140ddff9e1e4e7279985f5f7796 +INFO:root:PassingDataObject: nmdc:7d9d9abd88a1122b0da95b7ca3028c60 +INFO:root:PassingDataObject: nmdc:1dcef65db35d03fb181620869be2f216 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324057 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324057 +INFO:root:found 1 records +INFO:root:record: nmdc:f93506086a0b0a78f3ae49e46addde0e, metaT activity for gold:Gp0324057 +INFO:root:PassingDataObject: nmdc:de2cc4b245ef86b8dcf11dd5de4132b7 +INFO:root:PassingDataObject: nmdc:5c2df8f1562c0ff396d85583dd7d8396 +INFO:root:PassingDataObject: nmdc:2877482ed87193ad261ba6b035249fcd +ERROR:root:DataObjectNotFound nmdc:eb216db5f15b5982f60cb2c5f0f82b97 for nmdc:metaT/nmdc:f93506086a0b0a78f3ae49e46addde0e +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:f93506086a0b0a78f3ae49e46addde0e, metaT activity for gold:Gp0324057 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-88r8wq58 +INFO:root:legacy_id: gold:Gp0324062 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-88r8wq58 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8c0d64d0b3516a61a253 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324062 +INFO:root:found 1 records +INFO:root:record: nmdc:0f0bf26b7c563292f8bbf076bc679c61, ReadQC activiity 503568_191765 +INFO:root:PassingDataObject: nmdc:019906c31826155e44fb9b477b28dd6a +INFO:root:PassingDataObject: nmdc:a77cd57e6c65b2745e559c60929bb657 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324062 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324062 +INFO:root:found 1 records +INFO:root:record: nmdc:2c66e4afb9ccee54702cfee6147a4354, Metagenome assembly 503568_191765 +WARNING:root:DataObjectNoType: nmdc:a53cc3caceafd7e4a288b31702d27e8e +WARNING:root:DataObjectNoType: nmdc:65645603a980f61f10a973334a193a56 +WARNING:root:DataObjectNoType: nmdc:58e3251bbc3c2152e2808269d86a872c +WARNING:root:DataObjectNoType: nmdc:baafdf8e1e8d61084ea57a45daffd9b7 +WARNING:root:DataObjectNoType: nmdc:8ff88881fabab20ff0bd05224036f3ee +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324062 +INFO:root:found 1 records +INFO:root:record: nmdc:da77b0888e64217118bddd9ca88a5797, MetagenomeAnnotation activity for gold:Gp0324062 +INFO:root:PassingDataObject: nmdc:f1b09534f1c06adbf95de45ab9e57663 +INFO:root:PassingDataObject: nmdc:6156c4995f09a7f658d03305f76fcdfa +INFO:root:PassingDataObject: nmdc:7c6c5007f8b440743ca999b8cf59960f +INFO:root:PassingDataObject: nmdc:037ad44647bb0a6950a7305ca2431582 +INFO:root:PassingDataObject: nmdc:02e29f6925ee26b75db424ea4bc2b74f +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324062 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324062 +INFO:root:found 1 records +INFO:root:record: nmdc:81413537b3e6379a1f6ea3561cfe737c, metaT activity for gold:Gp0324062 +INFO:root:PassingDataObject: nmdc:b09e6b8e603d3b77bbb4eef2589fbbc4 +INFO:root:PassingDataObject: nmdc:19bedaad721679cbbfda8993be30563a +ERROR:root:DataObjectNotFound nmdc:4b9b0f82bf50950ecf8b77d24a141565 for nmdc:metaT/nmdc:81413537b3e6379a1f6ea3561cfe737c +ERROR:root:FailedDataObject: nmdc:d2a7ca47fd9b5e9338ebee9419950f37, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:81413537b3e6379a1f6ea3561cfe737c, metaT activity for gold:Gp0324062 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-ns758c90 +INFO:root:legacy_id: gold:Gp0396393 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-ns758c90 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5cb4980146d1e6746824a924 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396393 +INFO:root:found 1 records +INFO:root:record: nmdc:fd5c84987e0992ff4d6db31f1993bcf1, ReadQC activiity 503568_212402 +INFO:root:PassingDataObject: nmdc:0be49300463a21ffccf7558ede858646 +INFO:root:PassingDataObject: nmdc:79a0dd7dedb321a1d03cb79ca371fa8a +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0396393 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0396393 +INFO:root:found 1 records +INFO:root:record: nmdc:cf6d49c6553be54fd69119f6aee65897, Metagenome assembly 503568_212402 +WARNING:root:DataObjectNoType: nmdc:2a7758e73c8c0d5ce0d05cdd965bfcb2 +WARNING:root:DataObjectNoType: nmdc:6bdac3563b8453d80073d37261a236c0 +WARNING:root:DataObjectNoType: nmdc:578af53896d39353291e10225c83d726 +WARNING:root:DataObjectNoType: nmdc:9990d3a3c553a94cc74582391baba5b6 +WARNING:root:DataObjectNoType: nmdc:ef63ed3d9137d17d65bade077fd423d3 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0396393 +INFO:root:found 1 records +INFO:root:record: nmdc:994588e22bb440eefab12f51e8db6544, MetagenomeAnnotation activity for gold:Gp0396393 +INFO:root:PassingDataObject: nmdc:a20fbe74de49b89f3c67dd7ce072fa36 +INFO:root:PassingDataObject: nmdc:61d05b3f0370fc9ba0b2636e99e9978e +INFO:root:PassingDataObject: nmdc:12b2cbeafed5242d0c9066dc790c268a +INFO:root:PassingDataObject: nmdc:174e1bac949acb539cbdd22a53027891 +INFO:root:PassingDataObject: nmdc:f3a57d37063c31bca9948096c0e0041a +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0396393 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0396393 +INFO:root:found 1 records +INFO:root:record: nmdc:5ca43c35d0d6221e62c411c498becbd8, metaT activity for gold:Gp0396393 +INFO:root:PassingDataObject: nmdc:397ba4d4363a26d0f69da5938241cc95 +INFO:root:PassingDataObject: nmdc:504665aaf1effea043f1cb68afc29f97 +INFO:root:PassingDataObject: nmdc:77b7958eeed5deef399d6b394231e5a7 +ERROR:root:DataObjectNotFound nmdc:e4cf91ffe121a58186e6f123f117e0c2 for nmdc:metaT/nmdc:5ca43c35d0d6221e62c411c498becbd8 +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:5ca43c35d0d6221e62c411c498becbd8, metaT activity for gold:Gp0396393 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-9tn03g94 +INFO:root:legacy_id: gold:Gp0396394 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9tn03g94 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5cb49ac046d1e6746824a9f1 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396394 +INFO:root:found 1 records +INFO:root:record: nmdc:0de0997fee3fd16d0a80c4b9324d76ca, ReadQC activiity 503568_212403 +INFO:root:PassingDataObject: nmdc:168c38405e5bc2c14ab3b81b459b8b86 +INFO:root:PassingDataObject: nmdc:97829e4e15373e2e5617a2f6be5684da +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0396394 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0396394 +INFO:root:found 1 records +INFO:root:record: nmdc:16a1dcb1dfdb78954807299bda2dcee1, Metagenome assembly 503568_212403 +WARNING:root:DataObjectNoType: nmdc:6e1ee8665c7abca18cf0a22fe2008a17 +WARNING:root:DataObjectNoType: nmdc:6b5cf9bac96dda0639bd7c89ffdd14bf +WARNING:root:DataObjectNoType: nmdc:805180d043ff0cc60cecd96b4fdf60e5 +WARNING:root:DataObjectNoType: nmdc:151cbaf206401942bc60259ec7cc19c2 +WARNING:root:DataObjectNoType: nmdc:bf486e339f97499afc608f010bb489a1 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0396394 +INFO:root:found 1 records +INFO:root:record: nmdc:18261bfa0823d43b13f74b931c13a1df, MetagenomeAnnotation activity for gold:Gp0396394 +INFO:root:PassingDataObject: nmdc:b117a12316d17d1bfabd811f5fde9877 +INFO:root:PassingDataObject: nmdc:7ba31293fa884e1569f80170e747c5b7 +INFO:root:PassingDataObject: nmdc:0ca71a508e5885a7a7406648c7e69e19 +INFO:root:PassingDataObject: nmdc:2b359990d1282b4bcd3ca017b05f056c +INFO:root:PassingDataObject: nmdc:d54dcb2877dd5dc36ab940c28558fc06 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0396394 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0396394 +INFO:root:found 1 records +INFO:root:record: nmdc:c518af94e127cb4ee6ee8377abed8a6c, metaT activity for gold:Gp0396394 +INFO:root:PassingDataObject: nmdc:611701f7a484ca98878b6311e11c13bb +ERROR:root:DataObjectNotFound nmdc:18589f426c24e06ff58610dcd48f3bd9 for nmdc:metaT/nmdc:c518af94e127cb4ee6ee8377abed8a6c +ERROR:root:FailedDataObject: nmdc:704b0770f0df0b7bcc9e0551829e4782, +ERROR:root:FailedDataObject: nmdc:8cb083d46c7118ae27e5781a095ab2c5, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:c518af94e127cb4ee6ee8377abed8a6c, metaT activity for gold:Gp0396394 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-h9xdkp33 +INFO:root:legacy_id: gold:Gp0324058 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-h9xdkp33 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5b6f8bf864d0b3516a61a24b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0324058 +INFO:root:found 1 records +INFO:root:record: nmdc:9edb8ddc71e2bb76fe3e1bc604a7b793, ReadQC activiity 503568_191761 +INFO:root:PassingDataObject: nmdc:46983977ba09654ef5ce50e7466e2cf4 +INFO:root:PassingDataObject: nmdc:a21d5a90f0fc4057a6723bee1b8fc392 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0324058 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0324058 +INFO:root:found 1 records +INFO:root:record: nmdc:2130a1b4cc787d674c7684fcf4a8767c, Metagenome assembly 503568_191761 +WARNING:root:DataObjectNoType: nmdc:0b805b7c577ea85153b4219d737567e8 +WARNING:root:DataObjectNoType: nmdc:a9e8c7c81a46cf16ba13b918cbae0ee5 +WARNING:root:DataObjectNoType: nmdc:2fcfc2c1a67784aa5d4bbb8d2f8f7903 +WARNING:root:DataObjectNoType: nmdc:48640d63af8d93caa1f8ec87d2afa02b +WARNING:root:DataObjectNoType: nmdc:a89a761c23be1b7f0e9b9a3d592ff718 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0324058 +INFO:root:found 1 records +INFO:root:record: nmdc:b8f5351b114af34d5357646dbef04478, MetagenomeAnnotation activity for gold:Gp0324058 +INFO:root:PassingDataObject: nmdc:9610b8cd9da3a94b4d6f3448a9aab58f +INFO:root:PassingDataObject: nmdc:81633312200566fdbdc9bd02f5ca2845 +INFO:root:PassingDataObject: nmdc:94889f074665270885f500ba0d0341df +INFO:root:PassingDataObject: nmdc:111ba8fca906ac409564d9941481b9e7 +INFO:root:PassingDataObject: nmdc:8255ab49a4b3be1fa994336914bdbece +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0324058 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0324058 +INFO:root:found 1 records +INFO:root:record: nmdc:67d1b2d871ee8ffa107c8367ef68205c, metaT activity for gold:Gp0324058 +INFO:root:PassingDataObject: nmdc:8d5d3971b3a06f503d290b1be740a3d8 +ERROR:root:DataObjectNotFound nmdc:690271181735467ff2f978d804ce4fee for nmdc:metaT/nmdc:67d1b2d871ee8ffa107c8367ef68205c +ERROR:root:FailedDataObject: nmdc:4db8bc953f71459c8e65093ce5817949, +ERROR:root:FailedDataObject: nmdc:52049656f7ce97dcf4a62b4bdb96e2f5, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:67d1b2d871ee8ffa107c8367ef68205c, metaT activity for gold:Gp0324058 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-dhq5dy31 +INFO:root:legacy_id: gold:Gp0396395 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-dhq5dy31 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5cb4980a46d1e6746824a927 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396395 +INFO:root:found 0 records +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0396395 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0396395 +INFO:root:found 0 records +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0396395 +INFO:root:found 0 records +INFO:root:set_name: mags_activity_set for gold:Gp0396395 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0396395 +INFO:root:found 0 records +INFO:root:omics_processing_record: nmdc:omprc-11-4z72k510 +INFO:root:legacy_id: gold:Gp0396397 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-4z72k510 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5cb49ac446d1e6746824a9f2 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396397 +INFO:root:found 1 records +INFO:root:record: nmdc:e1881e998b19ad719a598b41e05a524e, ReadQC activiity 503568_212406 +INFO:root:PassingDataObject: nmdc:e364755daab790defa402b5bc18decee +INFO:root:PassingDataObject: nmdc:8f32cceb8ec5910c6204e475c1c8fc30 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0396397 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0396397 +INFO:root:found 1 records +INFO:root:record: nmdc:b072bc269b4804c0fe8961b63d0e5a2f, Metagenome assembly 503568_212406 +WARNING:root:DataObjectNoType: nmdc:8818a149650445115fd7a4c52c5d7cb4 +WARNING:root:DataObjectNoType: nmdc:99e322613e419fca82eadc54cf4f4497 +WARNING:root:DataObjectNoType: nmdc:e2f9e2106eee38cf5b6ea0f2c51b97b1 +WARNING:root:DataObjectNoType: nmdc:d3f743b189cdc50dfe39e4b56e95c9f7 +WARNING:root:DataObjectNoType: nmdc:3c9bfdab5d0cc5a776103406a75088e4 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0396397 +INFO:root:found 1 records +INFO:root:record: nmdc:5b0dba88801b500203d5b763984251b7, MetagenomeAnnotation activity for gold:Gp0396397 +INFO:root:PassingDataObject: nmdc:8cc9622dd84e17be034238fa66ccc0e4 +INFO:root:PassingDataObject: nmdc:22e4a0d6cde32ef36658116389c8617e +INFO:root:PassingDataObject: nmdc:787851a990b6e3e74e21f186838c8946 +INFO:root:PassingDataObject: nmdc:8dca5ff459e41e2935b9c08c5004f56d +INFO:root:PassingDataObject: nmdc:d696730dd7aec91871726d2a8bf7946c +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0396397 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0396397 +INFO:root:found 1 records +INFO:root:record: nmdc:81d54c41937fe61ddb8b1c40ab0b85a6, metaT activity for gold:Gp0396397 +INFO:root:PassingDataObject: nmdc:d01fbc2f3b716eaf35b7ba3017bb35a9 +ERROR:root:DataObjectNotFound nmdc:e7e7582466f2c7d419e1d03f0b529879 for nmdc:metaT/nmdc:81d54c41937fe61ddb8b1c40ab0b85a6 +ERROR:root:FailedDataObject: nmdc:1bfb9a3bb18b8382d3dcd773077b9deb, +ERROR:root:FailedDataObject: nmdc:503e153b8be903bec4d3cdeca215dd1c, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:81d54c41937fe61ddb8b1c40ab0b85a6, metaT activity for gold:Gp0396397 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-cdtew846 +INFO:root:legacy_id: gold:Gp0396398 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-cdtew846 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5cb49acc46d1e6746824a9f5 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396398 +INFO:root:found 1 records +INFO:root:record: nmdc:2327ecd4d200acc4c0d9d6ac5b88c84c, ReadQC activiity 503568_212407 +INFO:root:PassingDataObject: nmdc:7db1eb133aa318f597b5c551b7612bf3 +INFO:root:PassingDataObject: nmdc:c1a0f907858d89c7a29995019de95595 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0396398 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0396398 +INFO:root:found 1 records +INFO:root:record: nmdc:c5c187a4a11a2198c7d93b05ed188740, Metagenome assembly 503568_212407 +WARNING:root:DataObjectNoType: nmdc:8aeef3165c276deac2d0c4d3854fa0a5 +WARNING:root:DataObjectNoType: nmdc:c3969d9315b13bf906968c27791a0a86 +WARNING:root:DataObjectNoType: nmdc:fc410ae4d091fda75fc3f59a2a99c470 +WARNING:root:DataObjectNoType: nmdc:f95010eb7d9e77d6e133f3d93a5f7a5f +WARNING:root:DataObjectNoType: nmdc:81b7d275fa674ae7dc14738e8dbaade8 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0396398 +INFO:root:found 1 records +INFO:root:record: nmdc:3937b209cad2769633a309e8bd646a09, MetagenomeAnnotation activity for gold:Gp0396398 +INFO:root:PassingDataObject: nmdc:438665061a545c30b5d719c94c4eb49c +INFO:root:PassingDataObject: nmdc:4da3c3e3a0d879b1ee858dc9b3970a52 +INFO:root:PassingDataObject: nmdc:e84330ae8298676bccdae94e910ae7fb +INFO:root:PassingDataObject: nmdc:bfe96e1b94f4239f8492faec66a5e932 +INFO:root:PassingDataObject: nmdc:626f689028669264a2f19b7d8a6a895b +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0396398 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0396398 +INFO:root:found 1 records +INFO:root:record: nmdc:7d5d57e00c94e8bb4eafb2645d65a445, metaT activity for gold:Gp0396398 +ERROR:root:DataObjectNotFound nmdc:bb14b03eb4a4e30fcea4b9faa98c08e0 for nmdc:metaT/nmdc:7d5d57e00c94e8bb4eafb2645d65a445 +ERROR:root:FailedDataObject: nmdc:6813a65fa09cdddbc99013aded08ea67, +ERROR:root:FailedDataObject: nmdc:6b4f34cc3405f25640fa383f8cf2c6ed, +ERROR:root:FailedDataObject: nmdc:7e8e5b8036c5a21631b1c631b16ff32f, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:7d5d57e00c94e8bb4eafb2645d65a445, metaT activity for gold:Gp0396398 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-x6542q10 +INFO:root:legacy_id: gold:Gp0396400 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-x6542q10 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5c98f34a46d1e619fc0f472c +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396400 +INFO:root:found 1 records +INFO:root:record: nmdc:12ed9b46b80e37da58a39bdf5f28beb9, ReadQC activiity 503568_212409 +INFO:root:PassingDataObject: nmdc:bfd72d48a3a938640ce5f329a969c02d +INFO:root:PassingDataObject: nmdc:df4724e06dabdd635fdf4da0f10d9263 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0396400 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0396400 +INFO:root:found 1 records +INFO:root:record: nmdc:0fac97e712982fee499f5f4782dc9f73, Metagenome assembly 503568_212409 +WARNING:root:DataObjectNoType: nmdc:e67956b6e52f63073cf14ee4c2e03df7 +WARNING:root:DataObjectNoType: nmdc:a60b7a1f06802a78b0fd3dc7dd32214b +WARNING:root:DataObjectNoType: nmdc:0c87cdfacbd4c50ac0415eac58ada24d +WARNING:root:DataObjectNoType: nmdc:d5c590aea9cbfbc594d21d5ed20f6fdf +WARNING:root:DataObjectNoType: nmdc:c75f18056db4a522111e346bd67f8957 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0396400 +INFO:root:found 1 records +INFO:root:record: nmdc:65ff4bf5e258bcbf8d9e0d956a32988a, MetagenomeAnnotation activity for gold:Gp0396400 +INFO:root:PassingDataObject: nmdc:4aaa1f4d2aade7cc056246276bbc536b +INFO:root:PassingDataObject: nmdc:3056ebd3a419dceba0d44ad2bb10039f +INFO:root:PassingDataObject: nmdc:28771f968875be8225181c697a765de0 +INFO:root:PassingDataObject: nmdc:70c54e4e675c76279c8988a10377a4d6 +INFO:root:PassingDataObject: nmdc:63e6f9d3e16a46b6c89eb7572187f737 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0396400 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0396400 +INFO:root:found 1 records +INFO:root:record: nmdc:4b78fd45bcfe9c402e2ed9d6df347067, metaT activity for gold:Gp0396400 +INFO:root:PassingDataObject: nmdc:33b14acd70334547ab629e4db9bc17d3 +ERROR:root:DataObjectNotFound nmdc:d16c1df1b6eca2a3997c93250673c58d for nmdc:metaT/nmdc:4b78fd45bcfe9c402e2ed9d6df347067 +ERROR:root:FailedDataObject: nmdc:ca92744bcb82e095f898c0b040e09bc7, +ERROR:root:FailedDataObject: nmdc:6cd7e4019eed25a346b59f67aac22c14, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:4b78fd45bcfe9c402e2ed9d6df347067, metaT activity for gold:Gp0396400 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-9m3rgy66 +INFO:root:legacy_id: gold:Gp0396399 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-9m3rgy66 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5cb49ad346d1e6746824a9f7 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396399 +INFO:root:found 1 records +INFO:root:record: nmdc:3425c53225918b365b392a456478c8ab, ReadQC activiity 503568_212408 +INFO:root:PassingDataObject: nmdc:0e0ce4fb7bd62fb44cfc4a43b860678d +INFO:root:PassingDataObject: nmdc:7d6c7dd7f6a424ab38585603840abf6b +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0396399 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0396399 +INFO:root:found 1 records +INFO:root:record: nmdc:c9ec9cec759492bd191aa606becd6638, Metagenome assembly 503568_212408 +WARNING:root:DataObjectNoType: nmdc:089c06178ac2f66bb1f6a0ca36d38ff9 +WARNING:root:DataObjectNoType: nmdc:a5866271e9dba25b87daf4f5f829c80f +WARNING:root:DataObjectNoType: nmdc:41ae2dfb91b889a47a9d83e85643c174 +WARNING:root:DataObjectNoType: nmdc:866150ef49ced1f46a2afcf52190f30e +WARNING:root:DataObjectNoType: nmdc:c544e4e3e327b4f3ce05107d093dd9c2 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0396399 +INFO:root:found 1 records +INFO:root:record: nmdc:6ace961767fd864cda21d485bf5711a8, MetagenomeAnnotation activity for gold:Gp0396399 +INFO:root:PassingDataObject: nmdc:2aab16bb2dce228dbfcc807891526216 +INFO:root:PassingDataObject: nmdc:5b2051a19652a50ec4244ee1a8e36166 +INFO:root:PassingDataObject: nmdc:e3397a980aa170d237220387f4f09c93 +INFO:root:PassingDataObject: nmdc:fdc9af225c8cf08ee3941ecc8065d9c6 +INFO:root:PassingDataObject: nmdc:9f5f8ee47cca6e8dabd246e736088a28 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0396399 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0396399 +INFO:root:found 1 records +INFO:root:record: nmdc:14a60196afaedbaea12d59cb50fe7e92, metaT activity for gold:Gp0396399 +INFO:root:PassingDataObject: nmdc:64a864477cd77f962e7e53f421c182b0 +ERROR:root:DataObjectNotFound nmdc:59e944a5bd686bb1d85d9ad06356854a for nmdc:metaT/nmdc:14a60196afaedbaea12d59cb50fe7e92 +ERROR:root:FailedDataObject: nmdc:538fe856c9ef3dca4d0d3421f4720251, +ERROR:root:FailedDataObject: nmdc:4e9f2b78a15caddd4ff5591c3d1347a1, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:14a60196afaedbaea12d59cb50fe7e92, metaT activity for gold:Gp0396399 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-2s3hnv15 +INFO:root:legacy_id: gold:Gp0396401 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-2s3hnv15 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5cb49ada46d1e6746824a9f9 +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396401 +INFO:root:found 1 records +INFO:root:record: nmdc:d41c5ab6b9897ff4299b9f86b546ebbf, ReadQC activiity 503568_212410 +INFO:root:PassingDataObject: nmdc:3097e572fb843cedf641378d14d8b8fc +INFO:root:PassingDataObject: nmdc:dc1a09723f94bfa16db006a0c73761c4 +INFO:root:passing_data_objects: 2 +INFO:root:PassingRecords: read_qc_analysis_activity_set, 1 +INFO:root:set_name: read_based_taxonomy_analysis_activity_set for gold:Gp0396401 +INFO:root:found 0 records +INFO:root:set_name: metagenome_assembly_set for gold:Gp0396401 +INFO:root:found 1 records +INFO:root:record: nmdc:48baa49f621c8202312553a5a2e5fc1d, Metagenome assembly 503568_212410 +WARNING:root:DataObjectNoType: nmdc:a1e57eb8209fd813925a41d00af297a6 +WARNING:root:DataObjectNoType: nmdc:a93b163bacb9f2b9577e1f0766572c9d +WARNING:root:DataObjectNoType: nmdc:aff19dc88689c91fe38996803802ed95 +WARNING:root:DataObjectNoType: nmdc:cdc5e73e03da914d7e7a7a655f66e926 +WARNING:root:DataObjectNoType: nmdc:84d6a59330789e9d42af55442b3dacd5 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_assembly_set, 1 +INFO:root:set_name: metagenome_annotation_activity_set for gold:Gp0396401 +INFO:root:found 1 records +INFO:root:record: nmdc:50e40947cb4664d4b4163ab37f3d4103, MetagenomeAnnotation activity for gold:Gp0396401 +INFO:root:PassingDataObject: nmdc:d85e3254f8b5fa769fa582e41c2c53b1 +INFO:root:PassingDataObject: nmdc:9567226c9b9c1cc7e28e8fc86c91f85c +INFO:root:PassingDataObject: nmdc:4a0ed516b43f43664e4eaea16d5f6b7c +INFO:root:PassingDataObject: nmdc:15744b0834476cc06ff45ae56d02d2f8 +INFO:root:PassingDataObject: nmdc:466c6609c7e4795646ef7b3e6e4f60b3 +INFO:root:passing_data_objects: 5 +INFO:root:PassingRecords: metagenome_annotation_activity_set, 1 +INFO:root:set_name: mags_activity_set for gold:Gp0396401 +INFO:root:found 0 records +INFO:root:set_name: metatranscriptome_activity_set for gold:Gp0396401 +INFO:root:found 1 records +INFO:root:record: nmdc:ed53f220db627936f9e5ca5fd3d6f9e9, metaT activity for gold:Gp0396401 +INFO:root:PassingDataObject: nmdc:25e24bb8e4bd0d118491837652e618ad +ERROR:root:DataObjectNotFound nmdc:80e2cf75fff69f6111ea7a738fe68eac for nmdc:metaT/nmdc:ed53f220db627936f9e5ca5fd3d6f9e9 +ERROR:root:FailedDataObject: nmdc:174aeb2879098061db914c1349b58638, +ERROR:root:FailedDataObject: nmdc:1b5cad2c716371653e63bda1c5d0795b, +ERROR:root:failing_data_objects: 3 +ERROR:root:WorkflowActivityMissingDataObjects: nmdc:ed53f220db627936f9e5ca5fd3d6f9e9, metaT activity for gold:Gp0396401 +ERROR:root:FailedRecords: metatranscriptome_activity_set, 1 +INFO:root:omics_processing_record: nmdc:omprc-11-r3rf7j74 +INFO:root:legacy_id: gold:Gp0396396 +INFO:root:Adding OmicsProcessing: nmdc:omprc-11-r3rf7j74 +INFO:root:Adding OmicsProcessing None has_output DataObject:jgi:5c98f34546d1e619fc0f472b +INFO:root:set_name: read_qc_analysis_activity_set for gold:Gp0396396 +INFO:root:found 1 records +INFO:root:record: nmdc:253901756ab66dddcfa2342fa5c519ea, ReadQC activiity 503568_212405 +INFO:root:PassingDataObject: nmdc:5ab841853fdcb6e6d02ae3dbbcb13e05 +INFO:root:PassingDataObject: nmdc:75f7ed5a2ef4061cd4ab827cd82daf5e 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nmdc:omprc-11-0tgxd659 +INFO:root:legacy_id: emsl:769745 +INFO:root:Writing 93 records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-dcqce727_associated_record_dump.json +INFO:root:Elapsed time: 288.3770751953125 +INFO:root:Writing 78 failed records to /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-dcqce727_failed_record_dump.json +INFO:root:Found 0 omics processing records with missing has_output +INFO:root:Found 0 read qc records with missing data objects diff --git a/nmdc_automation/re_iding/scripts/nmdc:sty-11-dcqce727_process_records.log b/nmdc_automation/re_iding/scripts/nmdc:sty-11-dcqce727_process_records.log new file mode 100644 index 00000000..710004e8 --- /dev/null +++ b/nmdc_automation/re_iding/scripts/nmdc:sty-11-dcqce727_process_records.log @@ -0,0 +1,4234 @@ +/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/urllib3/__init__.py:34: NotOpenSSLWarning: urllib3 v2 only supports OpenSSL 1.1.1+, currently the 'ssl' module is compiled with 'LibreSSL 2.8.3'. See: https://github.com/urllib3/urllib3/issues/3020 + warnings.warn( +INFO:root:Processing workflow records for study_id: nmdc:sty-11-dcqce727 +INFO:root:Using data_dir: /global/cfs/cdirs/m3408/results +INFO:root:Using db_infile: /Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/data/nmdc:sty-11-dcqce727_associated_record_dump.json +INFO:root:Read 93 records from db_infile +INFO:root:omics_processing_id: nmdc:omprc-11-2b4p5w74 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b869964d0b3516a5f4f4c nmdc:dobj-11-4pgxx674 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-2b4p5w74 +INFO:root:New activity id created for nmdc:omprc-11-2b4p5w74 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-hv4c0217.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2b4p5w74/nmdc:wfrqc-11-hv4c0217.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:358fd0533f80b4aec30e25c4e72c9aa0 nmdc:dobj-11-d7g3xj15 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-2b4p5w74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v8085h35.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:375620f19a28aac1e603758c6062337f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-2b4p5w74/nmdc:wfmgas-11-v8085h35.1/nmdc_wfmgas-11-v8085h35.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:375620f19a28aac1e603758c6062337f nmdc:dobj-11-ywg4da70 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-2b4p5w74 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v8085h35.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e890d681fa5d2f864b2df8a0e0ddaef +INFO:root:New file path computed for Assembly 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nmdc:omprc-11-73zj8f68 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vybjb222.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f2389fb98701dbd1e02406b56a11ef96 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-73zj8f68/nmdc:wfrbt-11-vybjb222.1/nmdc_wfrbt-11-vybjb222.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2389fb98701dbd1e02406b56a11ef96 nmdc:dobj-11-tbvwqg57 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-73zj8f68 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vybjb222.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e7a0f2bf148f52a80f0bf8e1304f1ce9 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-73zj8f68/nmdc:wfrbt-11-vybjb222.1/nmdc_wfrbt-11-vybjb222.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e7a0f2bf148f52a80f0bf8e1304f1ce9 nmdc:dobj-11-vhv5v629 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-73zj8f68 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vybjb222.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c8ddc2b1a70fd7c57e44a7c6db15ac1 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-73zj8f68/nmdc:wfrbt-11-vybjb222.1/nmdc_wfrbt-11-vybjb222.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c8ddc2b1a70fd7c57e44a7c6db15ac1 nmdc:dobj-11-zb8r3x38 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-73zj8f68 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vybjb222.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e130c6bb31789051ea7fb718fece4810 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-73zj8f68/nmdc:wfrbt-11-vybjb222.1/nmdc_wfrbt-11-vybjb222.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e130c6bb31789051ea7fb718fece4810 nmdc:dobj-11-y8nzvv72 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-73zj8f68 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vybjb222.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0a6731b1dcce68c11babe70c269a54ca +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-73zj8f68/nmdc:wfrbt-11-vybjb222.1/nmdc_wfrbt-11-vybjb222.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0a6731b1dcce68c11babe70c269a54ca nmdc:dobj-11-7hmesh75 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-73zj8f68 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vybjb222.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:aed6288d24e0efe01fe77e883beefcdd nmdc:wfrbt-11-vybjb222.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-73zj8f68 +INFO:root:omics_processing_id: nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86ad64d0b3516a5f4f52 nmdc:dobj-11-qz0hjq74 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-d09vf280 +INFO:root:New activity id created for nmdc:omprc-11-d09vf280 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-rfqgcy96.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrqc-11-rfqgcy96.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a72992147fab2ab7581f6c8e38191e21 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrqc-11-rfqgcy96.1/nmdc_wfrqc-11-rfqgcy96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a72992147fab2ab7581f6c8e38191e21 nmdc:dobj-11-1x45zv05 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rfqgcy96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ef5667c6f2fd489fa4bd80eae4164153 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrqc-11-rfqgcy96.1/nmdc_wfrqc-11-rfqgcy96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef5667c6f2fd489fa4bd80eae4164153 nmdc:dobj-11-r7zxfm54 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-rfqgcy96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:5ddc7a733aaa7e5a03d70ba2b3368345 nmdc:wfrqc-11-rfqgcy96.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-d09vf280 +INFO:root:New activity id created for nmdc:omprc-11-d09vf280 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0p90qv33.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfmgas-11-0p90qv33.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1f87cf8a6e87dc933bdd6822f52b43a +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfmgas-11-0p90qv33.1/nmdc_wfmgas-11-0p90qv33.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1f87cf8a6e87dc933bdd6822f52b43a nmdc:dobj-11-qcbzfg21 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0p90qv33.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5eca345d18398c4e2e7f424c0e1ff1ff +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfmgas-11-0p90qv33.1/nmdc_wfmgas-11-0p90qv33.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5eca345d18398c4e2e7f424c0e1ff1ff nmdc:dobj-11-hwrczd10 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0p90qv33.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4eb84f1c9818ff73c74af5729c428682 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfmgas-11-0p90qv33.1/nmdc_wfmgas-11-0p90qv33.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4eb84f1c9818ff73c74af5729c428682 nmdc:dobj-11-anp3m211 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0p90qv33.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:813d7b2eb9c30a8d6d79822e3078923b +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfmgas-11-0p90qv33.1/nmdc_wfmgas-11-0p90qv33.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:813d7b2eb9c30a8d6d79822e3078923b nmdc:dobj-11-bq2s6470 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0p90qv33.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bbb99df5de5d6ebdc071fcd3f8a0585e +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfmgas-11-0p90qv33.1/nmdc_wfmgas-11-0p90qv33.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bbb99df5de5d6ebdc071fcd3f8a0585e nmdc:dobj-11-y76ttp07 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0p90qv33.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:5ddc7a733aaa7e5a03d70ba2b3368345 nmdc:wfmgas-11-0p90qv33.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-d09vf280 +INFO:root:New activity id created for nmdc:omprc-11-d09vf280 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-4m9ckt88.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb1c9efdbc933d7cf8191d0b25e78e90 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb1c9efdbc933d7cf8191d0b25e78e90 nmdc:dobj-11-p0bdhx06 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9606f82d551ac68c3c3c856f0e743551 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9606f82d551ac68c3c3c856f0e743551 nmdc:dobj-11-147c6v40 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4b2e6874e87e29cb06208820e088907c +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4b2e6874e87e29cb06208820e088907c nmdc:dobj-11-473j4p90 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:47469435f57faba231148bc7fc13f95c +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47469435f57faba231148bc7fc13f95c nmdc:dobj-11-gpxjf015 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fc7e1a180571c1686297f4ab302e7358 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc7e1a180571c1686297f4ab302e7358 nmdc:dobj-11-d4asws39 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d42a298582fce33437ede0933249a584 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d42a298582fce33437ede0933249a584 nmdc:dobj-11-wpmybm18 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22fc353001e8416959972ba0955dd937 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22fc353001e8416959972ba0955dd937 nmdc:dobj-11-esbzk852 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d25b59e0eb409d1c41f5fee3026d51a +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d25b59e0eb409d1c41f5fee3026d51a nmdc:dobj-11-n2ff7x40 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3d217e5caf1b9a4a536e00d780cd44d +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-d09vf280/nmdc:wfrbt-11-4m9ckt88.1/nmdc_wfrbt-11-4m9ckt88.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3d217e5caf1b9a4a536e00d780cd44d nmdc:dobj-11-f2b4v125 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-d09vf280 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-4m9ckt88.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5ddc7a733aaa7e5a03d70ba2b3368345 nmdc:wfrbt-11-4m9ckt88.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-d09vf280 +INFO:root:omics_processing_id: nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86a064d0b3516a5f4f4e nmdc:dobj-11-ek9kpk26 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-1wva5e80 +INFO:root:New activity id created for nmdc:omprc-11-1wva5e80 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7p37c627.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrqc-11-7p37c627.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c42175a3db24c5a38025acb50689c9d4 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrqc-11-7p37c627.1/nmdc_wfrqc-11-7p37c627.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c42175a3db24c5a38025acb50689c9d4 nmdc:dobj-11-9c00bd05 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7p37c627.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13ba8c328d405dcd6e7606d0bf5c5f5c +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrqc-11-7p37c627.1/nmdc_wfrqc-11-7p37c627.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13ba8c328d405dcd6e7606d0bf5c5f5c nmdc:dobj-11-aax2z766 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7p37c627.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:42bde508cfceec40d3320554543edce6 nmdc:wfrqc-11-7p37c627.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-1wva5e80 +INFO:root:New activity id created for nmdc:omprc-11-1wva5e80 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-mnv8js42.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfmgas-11-mnv8js42.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7160e3471a2270f14ccc067c6318b4c0 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfmgas-11-mnv8js42.1/nmdc_wfmgas-11-mnv8js42.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7160e3471a2270f14ccc067c6318b4c0 nmdc:dobj-11-gehnka66 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mnv8js42.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c607ed9df3d474c03bd98f1f435c34c +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfmgas-11-mnv8js42.1/nmdc_wfmgas-11-mnv8js42.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c607ed9df3d474c03bd98f1f435c34c nmdc:dobj-11-c7nvnv42 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mnv8js42.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd3e339f8cb3ed17f0a98992f51df447 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfmgas-11-mnv8js42.1/nmdc_wfmgas-11-mnv8js42.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd3e339f8cb3ed17f0a98992f51df447 nmdc:dobj-11-khe7t621 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mnv8js42.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:67b631ae48f1352d37a0604029bd3efe +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfmgas-11-mnv8js42.1/nmdc_wfmgas-11-mnv8js42.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:67b631ae48f1352d37a0604029bd3efe nmdc:dobj-11-2fs4rd42 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrbt-11-wp1qfb60.1/nmdc_wfrbt-11-wp1qfb60.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43594a3666ac0bf08826db2c9191f35f nmdc:dobj-11-d5xev769 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wp1qfb60.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1cd859b8d8ec1d08536aeb3acc6a2b46 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrbt-11-wp1qfb60.1/nmdc_wfrbt-11-wp1qfb60.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1cd859b8d8ec1d08536aeb3acc6a2b46 nmdc:dobj-11-dyeb1s88 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wp1qfb60.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb333e04e270bdbf67df14c020f3e182 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrbt-11-wp1qfb60.1/nmdc_wfrbt-11-wp1qfb60.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb333e04e270bdbf67df14c020f3e182 nmdc:dobj-11-qtjxjj80 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wp1qfb60.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:728e41bbb05b496d46a69648a9817157 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrbt-11-wp1qfb60.1/nmdc_wfrbt-11-wp1qfb60.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:728e41bbb05b496d46a69648a9817157 nmdc:dobj-11-hra4sk16 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wp1qfb60.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:50de8e1f2c7c27c1ec52f5ecf5b59a58 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrbt-11-wp1qfb60.1/nmdc_wfrbt-11-wp1qfb60.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:50de8e1f2c7c27c1ec52f5ecf5b59a58 nmdc:dobj-11-3va4t809 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wp1qfb60.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:17c14adeb5744536ab40ca7073573fcc +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrbt-11-wp1qfb60.1/nmdc_wfrbt-11-wp1qfb60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:17c14adeb5744536ab40ca7073573fcc nmdc:dobj-11-m9r5t374 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wp1qfb60.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8dce35efdc8ab7ae4be935ee3ad6c6ef +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrbt-11-wp1qfb60.1/nmdc_wfrbt-11-wp1qfb60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8dce35efdc8ab7ae4be935ee3ad6c6ef nmdc:dobj-11-rkttkg70 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wp1qfb60.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7cc91a8c1179b0ccbffbd8c3752ba289 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-1wva5e80/nmdc:wfrbt-11-wp1qfb60.1/nmdc_wfrbt-11-wp1qfb60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7cc91a8c1179b0ccbffbd8c3752ba289 nmdc:dobj-11-pqgned66 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-1wva5e80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wp1qfb60.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:42bde508cfceec40d3320554543edce6 nmdc:wfrbt-11-wp1qfb60.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-1wva5e80 +INFO:root:omics_processing_id: nmdc:omprc-11-8gwr1y12 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86f164d0b3516a5f4f66 nmdc:dobj-11-w1vsg873 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8gwr1y12 +INFO:root:New activity id created for nmdc:omprc-11-8gwr1y12 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-6104fm05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8gwr1y12/nmdc:wfrqc-11-6104fm05.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:edeaf6791ecfdac886292c5ccb20fd1a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8gwr1y12/nmdc:wfrqc-11-6104fm05.1/nmdc_wfrqc-11-6104fm05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:edeaf6791ecfdac886292c5ccb20fd1a nmdc:dobj-11-grqq6t19 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created for nmdc:omprc-11-8gwr1y12 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-861q9h10.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8gwr1y12/nmdc:wfmgas-11-861q9h10.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21752d36424fe652fb8762857253e0fb +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8gwr1y12/nmdc:wfmgas-11-861q9h10.1/nmdc_wfmgas-11-861q9h10.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21752d36424fe652fb8762857253e0fb nmdc:dobj-11-7k173273 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-8gwr1y12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-861q9h10.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a6d38ec6f8731c9b9064652e13369ae5 +INFO:root:New file path computed for Assembly Scaffolds: 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8gwr1y12/nmdc:wfrbt-11-qsx9bn36.1/nmdc_wfrbt-11-qsx9bn36.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2799ee21fc5aec7422fe5c04644d61d7 nmdc:dobj-11-wyzydw58 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8gwr1y12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsx9bn36.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f4e88e3ff3289eae2c4583820dbca047 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8gwr1y12/nmdc:wfrbt-11-qsx9bn36.1/nmdc_wfrbt-11-qsx9bn36.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f4e88e3ff3289eae2c4583820dbca047 nmdc:dobj-11-gvqyvg46 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-8gwr1y12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsx9bn36.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c5605ee5127183e2ddfca7fa6e1e6648 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8gwr1y12/nmdc:wfrbt-11-qsx9bn36.1/nmdc_wfrbt-11-qsx9bn36.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c5605ee5127183e2ddfca7fa6e1e6648 nmdc:dobj-11-yrjqdb79 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8gwr1y12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsx9bn36.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cc3a841614ff6dace0b7d891d1a07812 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8gwr1y12/nmdc:wfrbt-11-qsx9bn36.1/nmdc_wfrbt-11-qsx9bn36.1_centrifuge_krona.html 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nmdc:omprc-11-8gwr1y12 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-qsx9bn36.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4bcfd096cb916513d2d4ace59d03e049 nmdc:wfrbt-11-qsx9bn36.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8gwr1y12 +INFO:root:omics_processing_id: nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b870164d0b3516a5f4f6b nmdc:dobj-11-1kr8db33 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zf0v3n42 +INFO:root:New activity id created for nmdc:omprc-11-zf0v3n42 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ea41zt09.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfrqc-11-ea41zt09.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1a41cb69314f0d9e7cc4fe07ec87329d +INFO:root:New file path computed for 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nmdc_wfrqc-11-ea41zt09.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bd873c28ea7329369b5bc77bd4b89884 nmdc:wfrqc-11-ea41zt09.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zf0v3n42 +INFO:root:New activity id created for nmdc:omprc-11-zf0v3n42 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8w3yqw24.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfmgas-11-8w3yqw24.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f94ea7496992dd2aa298b106020b745 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfmgas-11-8w3yqw24.1/nmdc_wfmgas-11-8w3yqw24.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f94ea7496992dd2aa298b106020b745 nmdc:dobj-11-7099wk12 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zf0v3n42 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report for nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yrywze23.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5e1803b787451fe95dae66562d4aedd2 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfrbt-11-yrywze23.1/nmdc_wfrbt-11-yrywze23.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5e1803b787451fe95dae66562d4aedd2 nmdc:dobj-11-8rcbze24 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yrywze23.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:85bc08d165a0504412658bfb905d0065 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfrbt-11-yrywze23.1/nmdc_wfrbt-11-yrywze23.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:85bc08d165a0504412658bfb905d0065 nmdc:dobj-11-x2st5v14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yrywze23.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:010c170740ee67fdeffa43969abc82e6 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfrbt-11-yrywze23.1/nmdc_wfrbt-11-yrywze23.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:010c170740ee67fdeffa43969abc82e6 nmdc:dobj-11-3c6aya59 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yrywze23.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f5a4a694f7b83f97797273da5f48b60 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfrbt-11-yrywze23.1/nmdc_wfrbt-11-yrywze23.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f5a4a694f7b83f97797273da5f48b60 nmdc:dobj-11-m62z4244 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yrywze23.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e34f386ac25ade0fb118d1e36f84a1be +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfrbt-11-yrywze23.1/nmdc_wfrbt-11-yrywze23.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e34f386ac25ade0fb118d1e36f84a1be nmdc:dobj-11-jpaa9w13 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yrywze23.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f33cced1d08af9dfcf6ceff857258a1f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfrbt-11-yrywze23.1/nmdc_wfrbt-11-yrywze23.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f33cced1d08af9dfcf6ceff857258a1f nmdc:dobj-11-mwhknf52 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yrywze23.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a823a72e12e428cfaf512c4fe3149025 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zf0v3n42/nmdc:wfrbt-11-yrywze23.1/nmdc_wfrbt-11-yrywze23.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a823a72e12e428cfaf512c4fe3149025 nmdc:dobj-11-ry4msd59 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zf0v3n42 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yrywze23.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:bd873c28ea7329369b5bc77bd4b89884 nmdc:wfrbt-11-yrywze23.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-zf0v3n42 +INFO:root:omics_processing_id: nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86bb64d0b3516a5f4f56 nmdc:dobj-11-61ehd168 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-8n61h723 +INFO:root:New activity id created for nmdc:omprc-11-8n61h723 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-cdfnbp05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrqc-11-cdfnbp05.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:18eeefd0c066fef1581944c0a1ab660b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrqc-11-cdfnbp05.1/nmdc_wfrqc-11-cdfnbp05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:18eeefd0c066fef1581944c0a1ab660b nmdc:dobj-11-gv1hsz44 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cdfnbp05.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8887676e1c9622171f0f96702b9d9006 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrqc-11-cdfnbp05.1/nmdc_wfrqc-11-cdfnbp05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8887676e1c9622171f0f96702b9d9006 nmdc:dobj-11-mmy9xc13 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-cdfnbp05.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a9b856016e98a9adf43cd8947b78c430 nmdc:wfrqc-11-cdfnbp05.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-8n61h723 +INFO:root:New activity id created for nmdc:omprc-11-8n61h723 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ve209v44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfmgas-11-ve209v44.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a0600b646a25c1e4dbed0664ddcc877e +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfmgas-11-ve209v44.1/nmdc_wfmgas-11-ve209v44.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0600b646a25c1e4dbed0664ddcc877e nmdc:dobj-11-hy7t3n34 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ve209v44.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:018cadc70b5ad51e086218dc464fe0a5 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfmgas-11-ve209v44.1/nmdc_wfmgas-11-ve209v44.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:018cadc70b5ad51e086218dc464fe0a5 nmdc:dobj-11-f4jm3w95 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ve209v44.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a392f7b38a25c3f0d292cc1296954779 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfmgas-11-ve209v44.1/nmdc_wfmgas-11-ve209v44.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a392f7b38a25c3f0d292cc1296954779 nmdc:dobj-11-gxg2xh93 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ve209v44.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8aae650d164fb5d7d4f563589016bd6d +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfmgas-11-ve209v44.1/nmdc_wfmgas-11-ve209v44.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8aae650d164fb5d7d4f563589016bd6d nmdc:dobj-11-3mjjh545 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ve209v44.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9f819691d8cc271c9a20a764982176a8 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfmgas-11-ve209v44.1/nmdc_wfmgas-11-ve209v44.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9f819691d8cc271c9a20a764982176a8 nmdc:dobj-11-9en31m04 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ve209v44.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a9b856016e98a9adf43cd8947b78c430 nmdc:wfmgas-11-ve209v44.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-8n61h723 +INFO:root:New activity id created for nmdc:omprc-11-8n61h723 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vgsxnb07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df21a8659e9a8d927658dddcd4990a4d +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:df21a8659e9a8d927658dddcd4990a4d nmdc:dobj-11-ay0b0p98 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6fb55f9ae7ce82335c6b6a017ba6881 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6fb55f9ae7ce82335c6b6a017ba6881 nmdc:dobj-11-k9bwq981 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d4f90b0c39c1f00152e1975f6241ad0 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d4f90b0c39c1f00152e1975f6241ad0 nmdc:dobj-11-1e2ha902 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebaca54025c3b9e0d21bb751883e8280 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebaca54025c3b9e0d21bb751883e8280 nmdc:dobj-11-nypdmc11 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9cc2420bdaacbdf3faf867f8a19ff36b +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9cc2420bdaacbdf3faf867f8a19ff36b nmdc:dobj-11-10891y56 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:66336811a748796f07d4b704eb06c186 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:66336811a748796f07d4b704eb06c186 nmdc:dobj-11-8za97e90 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b2498351dda7711385f27f36dc7b5b58 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b2498351dda7711385f27f36dc7b5b58 nmdc:dobj-11-9z110s90 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0b880ab7c7d16b5671d6ee8c9ba1710f +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0b880ab7c7d16b5671d6ee8c9ba1710f nmdc:dobj-11-arpdsp28 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dfe841e8a330e7e44cbdfb72e0e9b758 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8n61h723/nmdc:wfrbt-11-vgsxnb07.1/nmdc_wfrbt-11-vgsxnb07.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfe841e8a330e7e44cbdfb72e0e9b758 nmdc:dobj-11-2psmkp08 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-8n61h723 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vgsxnb07.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a9b856016e98a9adf43cd8947b78c430 nmdc:wfrbt-11-vgsxnb07.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8n61h723 +INFO:root:omics_processing_id: nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86fc64d0b3516a5f4f69 nmdc:dobj-11-n4fce390 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-x7kvdr37 +INFO:root:New activity id created for nmdc:omprc-11-x7kvdr37 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-nfzxct65.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfrqc-11-nfzxct65.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de18fcca30ee3db3035a3510a8db41d9 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfrqc-11-nfzxct65.1/nmdc_wfrqc-11-nfzxct65.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de18fcca30ee3db3035a3510a8db41d9 nmdc:dobj-11-ft5qsv88 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created for nmdc:omprc-11-x7kvdr37 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-b0v52b05.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfmgas-11-b0v52b05.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7cfdb4086178edf1937be82825bdbb28 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfmgas-11-b0v52b05.1/nmdc_wfmgas-11-b0v52b05.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7cfdb4086178edf1937be82825bdbb28 nmdc:dobj-11-gb1jrp02 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0v52b05.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a615e5291994cb91e9b7d2d6ccbdad5 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfmgas-11-b0v52b05.1/nmdc_wfmgas-11-b0v52b05.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a615e5291994cb91e9b7d2d6ccbdad5 nmdc:dobj-11-mk8jam58 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0v52b05.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:88ae8d3d718bdf4ee6a076be2f7bc8f1 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfmgas-11-b0v52b05.1/nmdc_wfmgas-11-b0v52b05.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:88ae8d3d718bdf4ee6a076be2f7bc8f1 nmdc:dobj-11-6deq5a09 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0v52b05.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f1c2af140aabc8c8b89f0385db71be61 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfmgas-11-b0v52b05.1/nmdc_wfmgas-11-b0v52b05.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f1c2af140aabc8c8b89f0385db71be61 nmdc:dobj-11-5xgv2851 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-b0v52b05.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:80e8e5c705305669c0e1156dbc246eb1 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfmgas-11-b0v52b05.1/nmdc_wfmgas-11-b0v52b05.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:80e8e5c705305669c0e1156dbc246eb1 nmdc:dobj-11-vaqkjk48 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfrbt-11-y3nk6a02.1/nmdc_wfrbt-11-y3nk6a02.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f5677fac5c1c95844dc7dc0efef57220 nmdc:dobj-11-3mgbec77 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y3nk6a02.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c860c7fc46efe6a1fc830ce28c7c9a1 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfrbt-11-y3nk6a02.1/nmdc_wfrbt-11-y3nk6a02.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c860c7fc46efe6a1fc830ce28c7c9a1 nmdc:dobj-11-jbk7nn52 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y3nk6a02.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b87604e33b8f601ed3560e607079c4d5 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfrbt-11-y3nk6a02.1/nmdc_wfrbt-11-y3nk6a02.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b87604e33b8f601ed3560e607079c4d5 nmdc:dobj-11-6jnbm540 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y3nk6a02.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8abea70d210b656ad91e557bd7357a13 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfrbt-11-y3nk6a02.1/nmdc_wfrbt-11-y3nk6a02.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8abea70d210b656ad91e557bd7357a13 nmdc:dobj-11-0c4zxf07 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y3nk6a02.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4994cc6acbb8d371927c7cf92d054fd1 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-x7kvdr37/nmdc:wfrbt-11-y3nk6a02.1/nmdc_wfrbt-11-y3nk6a02.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4994cc6acbb8d371927c7cf92d054fd1 nmdc:dobj-11-s37q8s77 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y3nk6a02.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: 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nmdc:omprc-11-x7kvdr37 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-y3nk6a02.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:51dc1a161ec54d3efa11858102890dfa nmdc:wfrbt-11-y3nk6a02.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-x7kvdr37 +INFO:root:omics_processing_id: nmdc:omprc-11-p57kmg31 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86cd64d0b3516a5f4f5b nmdc:dobj-11-z6n8zk85 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-p57kmg31 +INFO:root:New activity id created for nmdc:omprc-11-p57kmg31 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-d1yn9v50.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p57kmg31/nmdc:wfrqc-11-d1yn9v50.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de6e5f32fe9e57c5bd37cbeeb93f1d0f +INFO:root:New file path computed for 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-p57kmg31/nmdc:wfmgas-11-bw1d4619.1/nmdc_wfmgas-11-bw1d4619.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:70f44195d91cde68beacf06955160b71 nmdc:dobj-11-8hxzvw13 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-p57kmg31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bw1d4619.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:0fe003b11eef4ba0c616b561ab0d684c nmdc:wfmgas-11-bw1d4619.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-p57kmg31 +INFO:root:New activity id created for nmdc:omprc-11-p57kmg31 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-tm14a571.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p57kmg31/nmdc:wfrbt-11-tm14a571.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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report for nmdc:omprc-11-p57kmg31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tm14a571.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0056f30a9d6b00046b8abb48620e823 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p57kmg31/nmdc:wfrbt-11-tm14a571.1/nmdc_wfrbt-11-tm14a571.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f0056f30a9d6b00046b8abb48620e823 nmdc:dobj-11-crxakf46 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-p57kmg31 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-tm14a571.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4cfebc341906940fc19a1ff38101f9c0 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfmgas-11-txb0a142.1/nmdc_wfmgas-11-txb0a142.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96c1f47da538ad25b7d8bc51c406540d nmdc:dobj-11-zqh9f315 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-dy188w64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-txb0a142.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ebd0ef6fc863a0c73941b8d48e30cdd7 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfmgas-11-txb0a142.1/nmdc_wfmgas-11-txb0a142.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ebd0ef6fc863a0c73941b8d48e30cdd7 nmdc:dobj-11-7rjht086 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-dy188w64 +INFO:nmdc_automation.re_iding.base:new_filename: 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfrbt-11-px158a94.1/nmdc_wfrbt-11-px158a94.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d2c564f22536394f9abf42ea57c21fc nmdc:dobj-11-zfe03c58 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-dy188w64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-px158a94.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d0bec6925350f5aec4220940cb2e28de +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfrbt-11-px158a94.1/nmdc_wfrbt-11-px158a94.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d0bec6925350f5aec4220940cb2e28de nmdc:dobj-11-wmxkzb41 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-dy188w64 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfrbt-11-px158a94.1/nmdc_wfrbt-11-px158a94.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de33bbdbdc4afbf63064c15051a311f5 nmdc:dobj-11-d0rxvr27 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-dy188w64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-px158a94.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:996795aef0e43b7ec3c585cada9249cf +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfrbt-11-px158a94.1/nmdc_wfrbt-11-px158a94.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:996795aef0e43b7ec3c585cada9249cf nmdc:dobj-11-1n3zh897 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-dy188w64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-px158a94.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:580abbca2b1b425674a04a1bc428c026 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfrbt-11-px158a94.1/nmdc_wfrbt-11-px158a94.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:580abbca2b1b425674a04a1bc428c026 nmdc:dobj-11-5hhbvm89 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-dy188w64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-px158a94.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1cbab6359554ad63477f8fc5ccba8209 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfrbt-11-px158a94.1/nmdc_wfrbt-11-px158a94.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1cbab6359554ad63477f8fc5ccba8209 nmdc:dobj-11-hme6y042 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-dy188w64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-px158a94.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd83dbd354a01359c28fe8163ea02ad7 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-dy188w64/nmdc:wfrbt-11-px158a94.1/nmdc_wfrbt-11-px158a94.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd83dbd354a01359c28fe8163ea02ad7 nmdc:dobj-11-qekvpy60 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-dy188w64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-px158a94.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:534d3ee21e05a7fe6b324082568cd114 nmdc:wfrbt-11-px158a94.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-dy188w64 +INFO:root:omics_processing_id: nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b870f64d0b3516a5f4f70 nmdc:dobj-11-8n6hh265 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-r2t38w78 +INFO:root:New activity id created for nmdc:omprc-11-r2t38w78 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-k814sn18.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrqc-11-k814sn18.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:acd7731f8f5bb1162d7115243c00713c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrqc-11-k814sn18.1/nmdc_wfrqc-11-k814sn18.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:acd7731f8f5bb1162d7115243c00713c nmdc:dobj-11-mxhp8065 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k814sn18.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dfa7518337746ce80f46b466ef167f6b +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrqc-11-k814sn18.1/nmdc_wfrqc-11-k814sn18.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dfa7518337746ce80f46b466ef167f6b nmdc:dobj-11-p3gkwj70 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-k814sn18.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:5d7d96366bfdc04c13d0d459ec44d9d6 nmdc:wfrqc-11-k814sn18.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-r2t38w78 +INFO:root:New activity id created for nmdc:omprc-11-r2t38w78 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-7pcf3p33.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfmgas-11-7pcf3p33.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f1367c23dc814bf5900506c90643cf5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfmgas-11-7pcf3p33.1/nmdc_wfmgas-11-7pcf3p33.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f1367c23dc814bf5900506c90643cf5 nmdc:dobj-11-9rm13w72 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7pcf3p33.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d6c3c419e158e9a4f1646b1a89150a5f +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfmgas-11-7pcf3p33.1/nmdc_wfmgas-11-7pcf3p33.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d6c3c419e158e9a4f1646b1a89150a5f nmdc:dobj-11-9dmxd678 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7pcf3p33.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7841dbb5e0500e9e45a39811bf3268c +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfmgas-11-7pcf3p33.1/nmdc_wfmgas-11-7pcf3p33.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7841dbb5e0500e9e45a39811bf3268c nmdc:dobj-11-je8q4z63 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7pcf3p33.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b184079cfca21704fe8034e458d91564 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfmgas-11-7pcf3p33.1/nmdc_wfmgas-11-7pcf3p33.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b184079cfca21704fe8034e458d91564 nmdc:dobj-11-jq7qbq72 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-7pcf3p33.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fba72d3d3ea977ece45929e616bcc83c +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfmgas-11-7pcf3p33.1/nmdc_wfmgas-11-7pcf3p33.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fba72d3d3ea977ece45929e616bcc83c nmdc:dobj-11-m582qd26 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7a37c0da9c318e5529ff7c1db26097e7 nmdc:dobj-11-yxc57v05 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:169236e8f023b7bf42939bd9ac7205ea +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrbt-11-84pa4519.1/nmdc_wfrbt-11-84pa4519.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:169236e8f023b7bf42939bd9ac7205ea nmdc:dobj-11-n356me28 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6035b2bfc3e25248836c14facca571e1 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrbt-11-84pa4519.1/nmdc_wfrbt-11-84pa4519.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6035b2bfc3e25248836c14facca571e1 nmdc:dobj-11-kjeh4k68 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:13412c117e3ce8de570d782db4dc32a7 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrbt-11-84pa4519.1/nmdc_wfrbt-11-84pa4519.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:13412c117e3ce8de570d782db4dc32a7 nmdc:dobj-11-ff463k78 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:69b9b2ee0c4f7429884ada5182cb1106 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrbt-11-84pa4519.1/nmdc_wfrbt-11-84pa4519.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:69b9b2ee0c4f7429884ada5182cb1106 nmdc:dobj-11-082h6127 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a0231d0e1a05a9ae40dd2c670c734341 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrbt-11-84pa4519.1/nmdc_wfrbt-11-84pa4519.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0231d0e1a05a9ae40dd2c670c734341 nmdc:dobj-11-sf57ra78 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45989b72c7b23db3ea9d76addb1e53f8 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrbt-11-84pa4519.1/nmdc_wfrbt-11-84pa4519.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45989b72c7b23db3ea9d76addb1e53f8 nmdc:dobj-11-egb4c337 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:74b6c27f1f054e7c5b84afe637ac5606 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrbt-11-84pa4519.1/nmdc_wfrbt-11-84pa4519.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:74b6c27f1f054e7c5b84afe637ac5606 nmdc:dobj-11-5tf2ph20 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9fe5462aa892257c897ebcbafe9a04c9 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-r2t38w78/nmdc:wfrbt-11-84pa4519.1/nmdc_wfrbt-11-84pa4519.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9fe5462aa892257c897ebcbafe9a04c9 nmdc:dobj-11-kwthgz27 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-r2t38w78 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-84pa4519.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5d7d96366bfdc04c13d0d459ec44d9d6 nmdc:wfrbt-11-84pa4519.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-r2t38w78 +INFO:root:omics_processing_id: nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86f764d0b3516a5f4f68 nmdc:dobj-11-z89qh894 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-86c56h25 +INFO:root:New activity id created for nmdc:omprc-11-86c56h25 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-mhs2bs98.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrqc-11-mhs2bs98.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7dd465cd8c96447a3686d90599d56f85 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrqc-11-mhs2bs98.1/nmdc_wfrqc-11-mhs2bs98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7dd465cd8c96447a3686d90599d56f85 nmdc:dobj-11-z5dyfd86 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mhs2bs98.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:246989e0258e3bdddd6c91f155cec622 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrqc-11-mhs2bs98.1/nmdc_wfrqc-11-mhs2bs98.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:246989e0258e3bdddd6c91f155cec622 nmdc:dobj-11-hhyhh911 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-mhs2bs98.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a8a526ad1e5caef313473e3d595ab9f1 nmdc:wfrqc-11-mhs2bs98.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-86c56h25 +INFO:root:New activity id created for nmdc:omprc-11-86c56h25 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ja7mqk40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfmgas-11-ja7mqk40.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:faeb0dcac0283d46ecf40fe51081b84c +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfmgas-11-ja7mqk40.1/nmdc_wfmgas-11-ja7mqk40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:faeb0dcac0283d46ecf40fe51081b84c nmdc:dobj-11-kdb4dw47 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-86c56h25 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nmdc:86548c8dfa7ad5284deab8eaade1500c nmdc:dobj-11-kpdk2061 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ja7mqk40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07c603212da8fcc06587d41ffdcb8ff2 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfmgas-11-ja7mqk40.1/nmdc_wfmgas-11-ja7mqk40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07c603212da8fcc06587d41ffdcb8ff2 nmdc:dobj-11-h03v3r90 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ja7mqk40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bec4388105bf4399fd26c8a2d0a7c741 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfmgas-11-ja7mqk40.1/nmdc_wfmgas-11-ja7mqk40.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bec4388105bf4399fd26c8a2d0a7c741 nmdc:dobj-11-x63z9t85 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ja7mqk40.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a8a526ad1e5caef313473e3d595ab9f1 nmdc:wfmgas-11-ja7mqk40.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-86c56h25 +INFO:root:New activity id created for nmdc:omprc-11-86c56h25 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-28g3gz73.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f38f42312292f41f660b9c0cfd1e7459 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f38f42312292f41f660b9c0cfd1e7459 nmdc:dobj-11-9tp1yj07 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e935b7683e6cb871d3b1753c7dab9b13 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e935b7683e6cb871d3b1753c7dab9b13 nmdc:dobj-11-v987sa70 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f61305896b29dbf6d5bcf3126ff21c83 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f61305896b29dbf6d5bcf3126ff21c83 nmdc:dobj-11-p4axvc65 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:67430f517455fb764c05f9cd498ae2f5 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:67430f517455fb764c05f9cd498ae2f5 nmdc:dobj-11-6c8nmn09 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f2842de0bce44e6e856b7b572d6ef920 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f2842de0bce44e6e856b7b572d6ef920 nmdc:dobj-11-bbw5f489 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9186340af39bc24532e43b8b0ff3ba3e +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9186340af39bc24532e43b8b0ff3ba3e nmdc:dobj-11-xf1vs751 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd5709fe302af965a7c6aa0f5f555468 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd5709fe302af965a7c6aa0f5f555468 nmdc:dobj-11-gd2hpr77 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fc7c025e5229364abcb17dad0fedd4e +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fc7c025e5229364abcb17dad0fedd4e nmdc:dobj-11-x39ctj90 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0f9d0489760934541c8f1df5a13cb6ee +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-86c56h25/nmdc:wfrbt-11-28g3gz73.1/nmdc_wfrbt-11-28g3gz73.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0f9d0489760934541c8f1df5a13cb6ee nmdc:dobj-11-zh490c58 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-86c56h25 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-28g3gz73.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:a8a526ad1e5caef313473e3d595ab9f1 nmdc:wfrbt-11-28g3gz73.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-86c56h25 +INFO:root:omics_processing_id: nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b870864d0b3516a5f4f6d nmdc:dobj-11-nk4ffe66 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-cytf1e18 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrqc-11-g9wt6r79.1/nmdc_wfrqc-11-g9wt6r79.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1490a548f47b564bfd24d7b17b844787 nmdc:dobj-11-ww6cyx25 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-g9wt6r79.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d nmdc:wfrqc-11-g9wt6r79.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-cytf1e18 +INFO:root:New activity id created for nmdc:omprc-11-cytf1e18 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-16rd0932.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfmgas-11-16rd0932.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:52f17dff1da3f6323128aa05ef3e7c24 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfmgas-11-16rd0932.1/nmdc_wfmgas-11-16rd0932.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:52f17dff1da3f6323128aa05ef3e7c24 nmdc:dobj-11-rk151j61 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-16rd0932.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:040acbd366202e9a89228c6619e6dd0a +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfmgas-11-16rd0932.1/nmdc_wfmgas-11-16rd0932.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:040acbd366202e9a89228c6619e6dd0a nmdc:dobj-11-hr47sv55 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-16rd0932.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61b5086227bbe92eb4e4765244c6c447 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfmgas-11-16rd0932.1/nmdc_wfmgas-11-16rd0932.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61b5086227bbe92eb4e4765244c6c447 nmdc:dobj-11-3abyhr77 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-16rd0932.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:91b73e393baca9d298fa21761ad41d0b +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfmgas-11-16rd0932.1/nmdc_wfmgas-11-16rd0932.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:91b73e393baca9d298fa21761ad41d0b nmdc:dobj-11-kq954n94 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-16rd0932.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1b23aba5b089bf6862dbaee1029b20e5 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfmgas-11-16rd0932.1/nmdc_wfmgas-11-16rd0932.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1b23aba5b089bf6862dbaee1029b20e5 nmdc:dobj-11-xavxtm19 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-16rd0932.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d nmdc:wfmgas-11-16rd0932.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-cytf1e18 +INFO:root:New activity id created for nmdc:omprc-11-cytf1e18 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-dz098f63.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7432ffe0160ea08c4be19d5f72cb3b07 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7432ffe0160ea08c4be19d5f72cb3b07 nmdc:dobj-11-fchngm63 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ddc1c1f5c250a91863eb20e3d9f5dd98 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ddc1c1f5c250a91863eb20e3d9f5dd98 nmdc:dobj-11-x3jyvx53 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2e9cb60bfc458a1a10aae8f058b54e10 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2e9cb60bfc458a1a10aae8f058b54e10 nmdc:dobj-11-8batbg22 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:09dbb2d990b0af34a993c7369d02e2da +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:09dbb2d990b0af34a993c7369d02e2da nmdc:dobj-11-09z39454 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a0141802a58de34696e7ce82da3d11dd +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0141802a58de34696e7ce82da3d11dd nmdc:dobj-11-y74vpc54 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2616ce39000fae4ca07c820a73b45bd2 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2616ce39000fae4ca07c820a73b45bd2 nmdc:dobj-11-5xkfsr95 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b3a6bfdfecf2097052553bb3dda27c24 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b3a6bfdfecf2097052553bb3dda27c24 nmdc:dobj-11-d02k1g69 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cf8b3e0b9e4f8af8cfb9fa4ca5bf64e6 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cf8b3e0b9e4f8af8cfb9fa4ca5bf64e6 nmdc:dobj-11-tqrs2q26 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c15529b4911e8615a291149e38d49d72 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-cytf1e18/nmdc:wfrbt-11-dz098f63.1/nmdc_wfrbt-11-dz098f63.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c15529b4911e8615a291149e38d49d72 nmdc:dobj-11-e715pw14 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-cytf1e18 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-dz098f63.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6a7e44e1e34a96cf1efa7c29ac3bb02d nmdc:wfrbt-11-dz098f63.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-cytf1e18 +INFO:root:omics_processing_id: nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b871d64d0b3516a5f4f74 nmdc:dobj-11-d9sbfc46 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m0fem526 +INFO:root:New activity id created for nmdc:omprc-11-m0fem526 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-z3tn4n16.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrqc-11-z3tn4n16.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61a27d21f40e4c66db176be315aac38e +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrqc-11-z3tn4n16.1/nmdc_wfrqc-11-z3tn4n16.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61a27d21f40e4c66db176be315aac38e nmdc:dobj-11-m50hr017 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z3tn4n16.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2d5eedf143c8143a52dc7e56894c9925 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrqc-11-z3tn4n16.1/nmdc_wfrqc-11-z3tn4n16.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2d5eedf143c8143a52dc7e56894c9925 nmdc:dobj-11-kzdjyc53 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-z3tn4n16.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:60eb5be289ff86d24e3fc88054f62e47 nmdc:wfrqc-11-z3tn4n16.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m0fem526 +INFO:root:New activity id created for nmdc:omprc-11-m0fem526 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-x5qpps38.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfmgas-11-x5qpps38.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2b1b8f77377612facefa23e68c78cb89 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfmgas-11-x5qpps38.1/nmdc_wfmgas-11-x5qpps38.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2b1b8f77377612facefa23e68c78cb89 nmdc:dobj-11-bxmkhe44 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x5qpps38.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6b843ab51d9592431a2bab88c247540 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfmgas-11-x5qpps38.1/nmdc_wfmgas-11-x5qpps38.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6b843ab51d9592431a2bab88c247540 nmdc:dobj-11-95w8w015 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x5qpps38.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eddb313a82c34061e76b9ce7b2226d6c +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfmgas-11-x5qpps38.1/nmdc_wfmgas-11-x5qpps38.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eddb313a82c34061e76b9ce7b2226d6c nmdc:dobj-11-80vxh318 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x5qpps38.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e0f1a3af362a7e8845c8a405412978f5 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfmgas-11-x5qpps38.1/nmdc_wfmgas-11-x5qpps38.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e0f1a3af362a7e8845c8a405412978f5 nmdc:dobj-11-db059q78 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x5qpps38.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:92ef36906affdfac2b6245ccb8c650da +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfmgas-11-x5qpps38.1/nmdc_wfmgas-11-x5qpps38.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:92ef36906affdfac2b6245ccb8c650da nmdc:dobj-11-pvf9am16 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-x5qpps38.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:60eb5be289ff86d24e3fc88054f62e47 nmdc:wfmgas-11-x5qpps38.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m0fem526 +INFO:root:New activity id created for nmdc:omprc-11-m0fem526 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-an8dkd26.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:69b1de9fbd7504ae46c158bdca2a19f8 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1/nmdc_wfrbt-11-an8dkd26.1_gottcha2_report.tsv 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1/nmdc_wfrbt-11-an8dkd26.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82a6ca11a4123806498e234abe4b2029 nmdc:dobj-11-ev2rzn55 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-an8dkd26.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3817d8a9ad06854638d87d959366fdf8 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1/nmdc_wfrbt-11-an8dkd26.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3817d8a9ad06854638d87d959366fdf8 nmdc:dobj-11-h0jxpn22 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-an8dkd26.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5371ba26d3ba739db5756434d80f4902 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1/nmdc_wfrbt-11-an8dkd26.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5371ba26d3ba739db5756434d80f4902 nmdc:dobj-11-66yk3608 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-an8dkd26.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:23373a05b8edb00eed25390537b3032a +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1/nmdc_wfrbt-11-an8dkd26.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:23373a05b8edb00eed25390537b3032a nmdc:dobj-11-sfdz1s46 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-an8dkd26.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ecd4644a922a29076de36a48ee3fe5f +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1/nmdc_wfrbt-11-an8dkd26.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ecd4644a922a29076de36a48ee3fe5f nmdc:dobj-11-axr30c22 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-an8dkd26.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8700b800f5a6990e57c345b91d877daa +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1/nmdc_wfrbt-11-an8dkd26.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8700b800f5a6990e57c345b91d877daa nmdc:dobj-11-pahfkn46 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-an8dkd26.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aee8566921d09ddead3a4594c3c06ef1 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m0fem526/nmdc:wfrbt-11-an8dkd26.1/nmdc_wfrbt-11-an8dkd26.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aee8566921d09ddead3a4594c3c06ef1 nmdc:dobj-11-wv9n4f24 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m0fem526 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-an8dkd26.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:60eb5be289ff86d24e3fc88054f62e47 nmdc:wfrbt-11-an8dkd26.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m0fem526 +INFO:root:omics_processing_id: nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b872264d0b3516a5f4f75 nmdc:dobj-11-vee9jn37 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-4kznfd65 +INFO:root:New activity id created for nmdc:omprc-11-4kznfd65 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7e1fs544.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrqc-11-7e1fs544.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8e97d689e715b4fa8a84b521b18a868c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrqc-11-7e1fs544.1/nmdc_wfrqc-11-7e1fs544.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8e97d689e715b4fa8a84b521b18a868c nmdc:dobj-11-h5h44675 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7e1fs544.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:161cd3ebf36d45dc9ae2bfffd1ab157e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrqc-11-7e1fs544.1/nmdc_wfrqc-11-7e1fs544.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:161cd3ebf36d45dc9ae2bfffd1ab157e nmdc:dobj-11-71tqnh98 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7e1fs544.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a4390cc0018042fc45d5bc312bd09d3d nmdc:wfrqc-11-7e1fs544.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-4kznfd65 +INFO:root:New activity id created for nmdc:omprc-11-4kznfd65 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-bpknw815.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfmgas-11-bpknw815.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5598121509ca0507ca3f292ca69e103a +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfmgas-11-bpknw815.1/nmdc_wfmgas-11-bpknw815.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5598121509ca0507ca3f292ca69e103a nmdc:dobj-11-qtjeqr72 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bpknw815.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7c490fa0ce466b60320e4faae0cd5333 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfmgas-11-bpknw815.1/nmdc_wfmgas-11-bpknw815.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7c490fa0ce466b60320e4faae0cd5333 nmdc:dobj-11-7tzere30 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bpknw815.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a2407b08f94d6447d28d099f7d45d6e8 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfmgas-11-bpknw815.1/nmdc_wfmgas-11-bpknw815.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a2407b08f94d6447d28d099f7d45d6e8 nmdc:dobj-11-261ja448 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bpknw815.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:afc7fc277552ff99c757d5e2dff3b66c +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfmgas-11-bpknw815.1/nmdc_wfmgas-11-bpknw815.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afc7fc277552ff99c757d5e2dff3b66c nmdc:dobj-11-n0afz305 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bpknw815.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3121416548698ac3a8b8aebb20762b24 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfmgas-11-bpknw815.1/nmdc_wfmgas-11-bpknw815.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3121416548698ac3a8b8aebb20762b24 nmdc:dobj-11-bfypdj43 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-bpknw815.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a4390cc0018042fc45d5bc312bd09d3d nmdc:wfmgas-11-bpknw815.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-4kznfd65 +INFO:root:New activity id created for nmdc:omprc-11-4kznfd65 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-d9sf3y11.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrbt-11-d9sf3y11.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c523329c748e522d31b71e61b606536 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrbt-11-d9sf3y11.1/nmdc_wfrbt-11-d9sf3y11.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c523329c748e522d31b71e61b606536 nmdc:dobj-11-gjj0fm21 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d9sf3y11.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7355c08996fd58b93d3799b55a4ed3e7 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrbt-11-d9sf3y11.1/nmdc_wfrbt-11-d9sf3y11.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7355c08996fd58b93d3799b55a4ed3e7 nmdc:dobj-11-1ts6g418 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d9sf3y11.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7642cd121d1b10a7a767fdcb453d4fb1 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrbt-11-d9sf3y11.1/nmdc_wfrbt-11-d9sf3y11.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7642cd121d1b10a7a767fdcb453d4fb1 nmdc:dobj-11-9tp2nj30 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d9sf3y11.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6521f9d55e6690258870604c49be45b +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrbt-11-d9sf3y11.1/nmdc_wfrbt-11-d9sf3y11.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6521f9d55e6690258870604c49be45b nmdc:dobj-11-q70r4w22 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d9sf3y11.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a288ba2bae5a3439362ea723ea02f1e6 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrbt-11-d9sf3y11.1/nmdc_wfrbt-11-d9sf3y11.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a288ba2bae5a3439362ea723ea02f1e6 nmdc:dobj-11-0skbf556 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d9sf3y11.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d0ed072b8b62455c8449b8cf042ca3f +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrbt-11-d9sf3y11.1/nmdc_wfrbt-11-d9sf3y11.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d0ed072b8b62455c8449b8cf042ca3f nmdc:dobj-11-11qdem49 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-4kznfd65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-d9sf3y11.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:df91d2d46863fa9354337d20161915cd +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-4kznfd65/nmdc:wfrbt-11-d9sf3y11.1/nmdc_wfrbt-11-d9sf3y11.1_kraken2_classification.tsv 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rbz91067/nmdc:wfmgas-11-exvcxa46.1/nmdc_wfmgas-11-exvcxa46.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62b9c7c60a9012ffd7e766d16723ed06 nmdc:dobj-11-p664gh54 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-rbz91067 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-exvcxa46.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2c956ebf898b5d095d9e70c1a4a9805b +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rbz91067/nmdc:wfmgas-11-exvcxa46.1/nmdc_wfmgas-11-exvcxa46.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2c956ebf898b5d095d9e70c1a4a9805b nmdc:dobj-11-9nxye859 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-rbz91067 +INFO:nmdc_automation.re_iding.base:new_filename: 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rbz91067/nmdc:wfrbt-11-3z6ppv42.1/nmdc_wfrbt-11-3z6ppv42.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:138dd89f5ff113a27e6f01ddb3508d59 nmdc:dobj-11-x0mt8640 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-rbz91067 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3z6ppv42.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32e6a4c1669af02ecb2f92a1e8c2bd06 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-rbz91067/nmdc:wfrbt-11-3z6ppv42.1/nmdc_wfrbt-11-3z6ppv42.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32e6a4c1669af02ecb2f92a1e8c2bd06 nmdc:dobj-11-30ddm769 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-rbz91067 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfmgas-11-74zkdq63.1/nmdc_wfmgas-11-74zkdq63.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b5421ea79390384c4f088ff6d149b35e nmdc:dobj-11-8v70g830 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-74zkdq63.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d1d74de6468fa00aa88f11c1fb1c8ee8 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfmgas-11-74zkdq63.1/nmdc_wfmgas-11-74zkdq63.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d1d74de6468fa00aa88f11c1fb1c8ee8 nmdc:dobj-11-rabqkc17 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfrbt-11-0n2mkw15.1/nmdc_wfrbt-11-0n2mkw15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:24b65ad4eab875edeb9cd3f4ddde2f7b nmdc:dobj-11-em08gh43 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0n2mkw15.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:890f98f3a9e66a92b316379f8abde2ce +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfrbt-11-0n2mkw15.1/nmdc_wfrbt-11-0n2mkw15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:890f98f3a9e66a92b316379f8abde2ce nmdc:dobj-11-c9bh4y90 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0n2mkw15.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45cb37d9084982b71f014f99430e896e +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfrbt-11-0n2mkw15.1/nmdc_wfrbt-11-0n2mkw15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45cb37d9084982b71f014f99430e896e nmdc:dobj-11-6ztfae70 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0n2mkw15.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b25cc63505927c25af14195c794d0801 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfrbt-11-0n2mkw15.1/nmdc_wfrbt-11-0n2mkw15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b25cc63505927c25af14195c794d0801 nmdc:dobj-11-mhv1nv81 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0n2mkw15.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3eb902e9b5378e095bac88050d5fb98 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfrbt-11-0n2mkw15.1/nmdc_wfrbt-11-0n2mkw15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3eb902e9b5378e095bac88050d5fb98 nmdc:dobj-11-wk8cfc40 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0n2mkw15.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d819920ce3f6e07df48ec284fde5fcf8 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfrbt-11-0n2mkw15.1/nmdc_wfrbt-11-0n2mkw15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d819920ce3f6e07df48ec284fde5fcf8 nmdc:dobj-11-83p2be52 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0n2mkw15.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3931ecc9193cdc049cfcca8c6d477540 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-8wq76j90/nmdc:wfrbt-11-0n2mkw15.1/nmdc_wfrbt-11-0n2mkw15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3931ecc9193cdc049cfcca8c6d477540 nmdc:dobj-11-yb3xgk62 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-8wq76j90 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-0n2mkw15.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:1b1e727ee5bf8e6f8750f3a606b3acfc nmdc:wfrbt-11-0n2mkw15.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-8wq76j90 +INFO:root:omics_processing_id: nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86c764d0b3516a5f4f59 nmdc:dobj-11-x2108j50 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-vkp93136 +INFO:root:New activity id created for nmdc:omprc-11-vkp93136 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-ze0zqv93.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfrqc-11-ze0zqv93.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f4be1bcf8d834bef32cd34f31855c332 +INFO:root:New file path computed for 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nmdc_wfrqc-11-ze0zqv93.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:72379f13da6e6f7f7da7dd5a40bfcb79 nmdc:wfrqc-11-ze0zqv93.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-vkp93136 +INFO:root:New activity id created for nmdc:omprc-11-vkp93136 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-wc91ry17.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfmgas-11-wc91ry17.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:659da7b0ed38a6fd97c0f9904e0f3404 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfmgas-11-wc91ry17.1/nmdc_wfmgas-11-wc91ry17.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:659da7b0ed38a6fd97c0f9904e0f3404 nmdc:dobj-11-zd9bdy35 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-vkp93136 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nmdc:21235046d8ab17cf3ac65d56f3849195 nmdc:dobj-11-n6bqsy23 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wc91ry17.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fc3848f4bc9f7bd7582a92160513adc2 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfmgas-11-wc91ry17.1/nmdc_wfmgas-11-wc91ry17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fc3848f4bc9f7bd7582a92160513adc2 nmdc:dobj-11-qp4k0t04 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wc91ry17.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d28ce8b98ecdfec49ab83b0a8cac526b +INFO:root:New file path computed for Assembly Coverage BAM: 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report for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7debem95.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e776f2b3d9895c17e525a455e3ecd8f2 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfrbt-11-7debem95.1/nmdc_wfrbt-11-7debem95.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e776f2b3d9895c17e525a455e3ecd8f2 nmdc:dobj-11-cann7251 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7debem95.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:348be0b55dd8fd8b138c1096f70f5ed6 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfrbt-11-7debem95.1/nmdc_wfrbt-11-7debem95.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:348be0b55dd8fd8b138c1096f70f5ed6 nmdc:dobj-11-v8hdrk59 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7debem95.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:defb48da588fbf203b7719ba4bdc887f +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfrbt-11-7debem95.1/nmdc_wfrbt-11-7debem95.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:defb48da588fbf203b7719ba4bdc887f nmdc:dobj-11-gvd4fq96 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7debem95.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e591fab1d80ce7a772f0aee372d97cad +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfrbt-11-7debem95.1/nmdc_wfrbt-11-7debem95.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e591fab1d80ce7a772f0aee372d97cad nmdc:dobj-11-p7d24q29 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7debem95.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bb7e40513976b4aae92224f6e01361a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfrbt-11-7debem95.1/nmdc_wfrbt-11-7debem95.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bb7e40513976b4aae92224f6e01361a nmdc:dobj-11-f4pjxk09 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7debem95.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4e972b5545dff18b7bdf67547a541e81 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfrbt-11-7debem95.1/nmdc_wfrbt-11-7debem95.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4e972b5545dff18b7bdf67547a541e81 nmdc:dobj-11-99230c61 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7debem95.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d5b6c4d596c10c53a456519628e12df6 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-vkp93136/nmdc:wfrbt-11-7debem95.1/nmdc_wfrbt-11-7debem95.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5b6c4d596c10c53a456519628e12df6 nmdc:dobj-11-hwnjcs82 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-vkp93136 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-7debem95.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:72379f13da6e6f7f7da7dd5a40bfcb79 nmdc:wfrbt-11-7debem95.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-vkp93136 +INFO:root:omics_processing_id: nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b872d64d0b3516a5f4f79 nmdc:dobj-11-3vx6m244 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-gjr6tz30 +INFO:root:New activity id created for nmdc:omprc-11-gjr6tz30 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3vxj3805.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrqc-11-3vxj3805.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7753efcc799660d8636d8e352a9f12df +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrqc-11-3vxj3805.1/nmdc_wfrqc-11-3vxj3805.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7753efcc799660d8636d8e352a9f12df nmdc:dobj-11-7y1h5n43 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3vxj3805.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:33149b76e2ab3e474926c424d92efd59 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrqc-11-3vxj3805.1/nmdc_wfrqc-11-3vxj3805.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:33149b76e2ab3e474926c424d92efd59 nmdc:dobj-11-6q7gbx49 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-3vxj3805.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:691437b2b7c3ac72441d48c7acb23ea6 nmdc:wfrqc-11-3vxj3805.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-gjr6tz30 +INFO:root:New activity id created for nmdc:omprc-11-gjr6tz30 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-vqj9ys91.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfmgas-11-vqj9ys91.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:be4c223bc796289bcf10779bb2c12484 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfmgas-11-vqj9ys91.1/nmdc_wfmgas-11-vqj9ys91.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:be4c223bc796289bcf10779bb2c12484 nmdc:dobj-11-gd83wn65 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqj9ys91.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4849f2905ee842b8b6bb13058facc9d9 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfmgas-11-vqj9ys91.1/nmdc_wfmgas-11-vqj9ys91.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4849f2905ee842b8b6bb13058facc9d9 nmdc:dobj-11-y6vgx617 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqj9ys91.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9740eabfb21fdf93023600c23a807f86 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfmgas-11-vqj9ys91.1/nmdc_wfmgas-11-vqj9ys91.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9740eabfb21fdf93023600c23a807f86 nmdc:dobj-11-r6wa4030 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-vqj9ys91.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6be863e0b5fdc9756c669b4bed6cac26 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfmgas-11-vqj9ys91.1/nmdc_wfmgas-11-vqj9ys91.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6be863e0b5fdc9756c669b4bed6cac26 nmdc:dobj-11-8bdfaa43 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nmdc:omprc-11-gjr6tz30 +INFO:root:New activity id created for nmdc:omprc-11-gjr6tz30 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-g1qh4123.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d0769a24e88b721b3d49b24ddac605ba +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1/nmdc_wfrbt-11-g1qh4123.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d0769a24e88b721b3d49b24ddac605ba nmdc:dobj-11-p4p2jg22 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1qh4123.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fbb6191d67adce909062f63ff9daeb37 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1/nmdc_wfrbt-11-g1qh4123.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fbb6191d67adce909062f63ff9daeb37 nmdc:dobj-11-06kptb64 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1qh4123.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:77892f62900fae13c60d56558cebde24 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1/nmdc_wfrbt-11-g1qh4123.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:77892f62900fae13c60d56558cebde24 nmdc:dobj-11-yz3dyw50 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-gjr6tz30 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1/nmdc_wfrbt-11-g1qh4123.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0c6ff517eec49ba175b3e54e9b67f824 nmdc:dobj-11-2es4qd59 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1qh4123.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ce0d14ff5848625b582af41739fd79a0 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1/nmdc_wfrbt-11-g1qh4123.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ce0d14ff5848625b582af41739fd79a0 nmdc:dobj-11-6b1f7c53 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1qh4123.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1570a3b175dd9b376193a25b7e0522e8 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1/nmdc_wfrbt-11-g1qh4123.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1570a3b175dd9b376193a25b7e0522e8 nmdc:dobj-11-134bcz52 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1qh4123.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86831cf3d71a02b0ed8644357163a107 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1/nmdc_wfrbt-11-g1qh4123.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86831cf3d71a02b0ed8644357163a107 nmdc:dobj-11-zqbfra65 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1qh4123.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ddcae2407fa5011316b24276297489ec +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-gjr6tz30/nmdc:wfrbt-11-g1qh4123.1/nmdc_wfrbt-11-g1qh4123.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ddcae2407fa5011316b24276297489ec nmdc:dobj-11-yxegdj13 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-gjr6tz30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-g1qh4123.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:691437b2b7c3ac72441d48c7acb23ea6 nmdc:wfrbt-11-g1qh4123.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-gjr6tz30 +INFO:root:omics_processing_id: nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b879764d0b3516a5f4f9e nmdc:dobj-11-9s3sjq31 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-9c749r88 +INFO:root:New activity id created for nmdc:omprc-11-9c749r88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-h8mc4651.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrqc-11-h8mc4651.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1c5c42f6c406e47cc950eb18a4abc22c +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrqc-11-h8mc4651.1/nmdc_wfrqc-11-h8mc4651.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1c5c42f6c406e47cc950eb18a4abc22c nmdc:dobj-11-dqax6w85 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created for nmdc:omprc-11-9c749r88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-pedn0h40.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfmgas-11-pedn0h40.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3bd6567c015e8b03be8af4803052cd3 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfmgas-11-pedn0h40.1/nmdc_wfmgas-11-pedn0h40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3bd6567c015e8b03be8af4803052cd3 nmdc:dobj-11-pmpdwe05 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pedn0h40.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:48a77f876d9e2f2405578e82cd73e8df +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfmgas-11-pedn0h40.1/nmdc_wfmgas-11-pedn0h40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:48a77f876d9e2f2405578e82cd73e8df nmdc:dobj-11-ytphw794 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pedn0h40.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b9acd28989e47f46e947d388426be2a4 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfmgas-11-pedn0h40.1/nmdc_wfmgas-11-pedn0h40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9acd28989e47f46e947d388426be2a4 nmdc:dobj-11-sf4bk565 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pedn0h40.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e1d38dde99fa6d77c65b1c7346d01c67 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfmgas-11-pedn0h40.1/nmdc_wfmgas-11-pedn0h40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e1d38dde99fa6d77c65b1c7346d01c67 nmdc:dobj-11-cc2p2g41 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-pedn0h40.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3f16f543aca0a782039cdeacfdc2fd1b +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfmgas-11-pedn0h40.1/nmdc_wfmgas-11-pedn0h40.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3f16f543aca0a782039cdeacfdc2fd1b nmdc:dobj-11-ageref05 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrbt-11-h4hsqv42.1/nmdc_wfrbt-11-h4hsqv42.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2298d54c63333c8862a50b25cc192ba7 nmdc:dobj-11-ahn8th53 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4hsqv42.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d64e5e9c2b672072c6e5c95873507905 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrbt-11-h4hsqv42.1/nmdc_wfrbt-11-h4hsqv42.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d64e5e9c2b672072c6e5c95873507905 nmdc:dobj-11-7aaf0n44 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4hsqv42.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:70f1b2c21b921c86b7015664efe3eac5 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrbt-11-h4hsqv42.1/nmdc_wfrbt-11-h4hsqv42.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:70f1b2c21b921c86b7015664efe3eac5 nmdc:dobj-11-aggs9k31 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4hsqv42.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8654430a7db995c1df3a4dad1cd149a3 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrbt-11-h4hsqv42.1/nmdc_wfrbt-11-h4hsqv42.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8654430a7db995c1df3a4dad1cd149a3 nmdc:dobj-11-g3kdqd14 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4hsqv42.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:19545582a02f22aa4485414727a78fcc +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrbt-11-h4hsqv42.1/nmdc_wfrbt-11-h4hsqv42.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:19545582a02f22aa4485414727a78fcc nmdc:dobj-11-r57pyv19 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4hsqv42.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4a6db8ede68d95f892ed25626f1c40bd +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrbt-11-h4hsqv42.1/nmdc_wfrbt-11-h4hsqv42.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4a6db8ede68d95f892ed25626f1c40bd nmdc:dobj-11-9yq9td62 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4hsqv42.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1b9b69457325cffbd58be7b00118afe +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9c749r88/nmdc:wfrbt-11-h4hsqv42.1/nmdc_wfrbt-11-h4hsqv42.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1b9b69457325cffbd58be7b00118afe nmdc:dobj-11-wx6xbj80 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9c749r88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h4hsqv42.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:c4f3f8a15d9081e8586ab6fe9c070239 nmdc:wfrbt-11-h4hsqv42.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9c749r88 +INFO:root:omics_processing_id: nmdc:omprc-11-zsbm5782 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87a264d0b3516a5f4fa1 nmdc:dobj-11-jjqb9b94 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zsbm5782 +INFO:root:New activity id created for nmdc:omprc-11-zsbm5782 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-wstqah72.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zsbm5782/nmdc:wfrqc-11-wstqah72.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:360431e74ee8818091569bc1fa5fb787 +INFO:root:New file path computed for 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nmdc:23b30f6392045c51e216a5408faa08df nmdc:dobj-11-nqgm3a26 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zsbm5782 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wrkpaq50.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:44d8559cc7491a72ddfedfc8e6eca867 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zsbm5782/nmdc:wfmgas-11-wrkpaq50.1/nmdc_wfmgas-11-wrkpaq50.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:44d8559cc7491a72ddfedfc8e6eca867 nmdc:dobj-11-axs2ae48 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-zsbm5782 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wrkpaq50.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:db294ab78c8be6c96555ba785cc795fa +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zsbm5782/nmdc:wfmgas-11-wrkpaq50.1/nmdc_wfmgas-11-wrkpaq50.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:db294ab78c8be6c96555ba785cc795fa nmdc:dobj-11-drn07v28 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-zsbm5782 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-wrkpaq50.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a798064b8c51fd4cd87663ee4276646c nmdc:wfmgas-11-wrkpaq50.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-zsbm5782 +INFO:root:New activity id created for nmdc:omprc-11-zsbm5782 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-0gp2we78.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zsbm5782/nmdc:wfrbt-11-0gp2we78.1 +INFO:nmdc_automation.re_iding.base:old_do_id: 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfmgas-11-y3fgww35.1/nmdc_wfmgas-11-y3fgww35.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc30889ba26996291b91e872b72d1faa nmdc:dobj-11-6g2c4e09 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-y3fgww35.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de958223583a8ff4c1d526149075f4fa +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfmgas-11-y3fgww35.1/nmdc_wfmgas-11-y3fgww35.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de958223583a8ff4c1d526149075f4fa nmdc:dobj-11-hrcary88 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfrbt-11-53sc0g14.1/nmdc_wfrbt-11-53sc0g14.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:054528de152dffec86f2777689c9ab59 nmdc:dobj-11-8kd3yx60 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-53sc0g14.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0630af0353bc72d9d2a0a9eada238345 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfrbt-11-53sc0g14.1/nmdc_wfrbt-11-53sc0g14.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0630af0353bc72d9d2a0a9eada238345 nmdc:dobj-11-fxtm2354 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-53sc0g14.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c53c3c50d29c30ce8f738bca2bf14647 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfrbt-11-53sc0g14.1/nmdc_wfrbt-11-53sc0g14.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c53c3c50d29c30ce8f738bca2bf14647 nmdc:dobj-11-sn3a1450 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-53sc0g14.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4afbef65b107f5d408fcfdff29b36f5d +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfrbt-11-53sc0g14.1/nmdc_wfrbt-11-53sc0g14.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4afbef65b107f5d408fcfdff29b36f5d nmdc:dobj-11-yqts0v47 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-53sc0g14.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dba2057d5e361b3347f0ee29d36b4ef3 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfrbt-11-53sc0g14.1/nmdc_wfrbt-11-53sc0g14.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dba2057d5e361b3347f0ee29d36b4ef3 nmdc:dobj-11-n6jp5633 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-53sc0g14.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:250cb573e87f7e9cd6cd5e9fc98cf543 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfrbt-11-53sc0g14.1/nmdc_wfrbt-11-53sc0g14.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:250cb573e87f7e9cd6cd5e9fc98cf543 nmdc:dobj-11-7hg60a84 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-53sc0g14.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f739e144f64edc59b0a26ea842d9abbc +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfrbt-11-53sc0g14.1/nmdc_wfrbt-11-53sc0g14.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f739e144f64edc59b0a26ea842d9abbc nmdc:dobj-11-qjk5b915 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-53sc0g14.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:26fd95004c18a7b4f2839560b37e677b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-mzk6by23/nmdc:wfrbt-11-53sc0g14.1/nmdc_wfrbt-11-53sc0g14.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:26fd95004c18a7b4f2839560b37e677b nmdc:dobj-11-gwberj23 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-mzk6by23 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-53sc0g14.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0280232355359cb9fd10451f5c3327f2 nmdc:wfrbt-11-53sc0g14.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-mzk6by23 +INFO:root:omics_processing_id: nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87aa64d0b3516a5f4fa4 nmdc:dobj-11-z9djcn88 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-khgaac94 +INFO:root:New activity id created for nmdc:omprc-11-khgaac94 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-7v4skc71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrqc-11-7v4skc71.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ac07bea7e5b31c365266d2244969fb1d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrqc-11-7v4skc71.1/nmdc_wfrqc-11-7v4skc71.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ac07bea7e5b31c365266d2244969fb1d nmdc:dobj-11-kp1ya064 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7v4skc71.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:27c47bd6f9abd55c89427d552310e983 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrqc-11-7v4skc71.1/nmdc_wfrqc-11-7v4skc71.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:27c47bd6f9abd55c89427d552310e983 nmdc:dobj-11-w113a505 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-7v4skc71.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:bff1ad6f01056c624761521883e250a2 nmdc:wfrqc-11-7v4skc71.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-khgaac94 +INFO:root:New activity id created for nmdc:omprc-11-khgaac94 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-ttd7zm04.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfmgas-11-ttd7zm04.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:46fce2e759e2fb050a325f2aed995d12 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfmgas-11-ttd7zm04.1/nmdc_wfmgas-11-ttd7zm04.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:46fce2e759e2fb050a325f2aed995d12 nmdc:dobj-11-4cbewz10 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ttd7zm04.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3574a21cb4ecb5cc79abee1a1a73300 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfmgas-11-ttd7zm04.1/nmdc_wfmgas-11-ttd7zm04.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3574a21cb4ecb5cc79abee1a1a73300 nmdc:dobj-11-qtfev180 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ttd7zm04.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:20f68c15dd397b960a77f149326b63fe +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfmgas-11-ttd7zm04.1/nmdc_wfmgas-11-ttd7zm04.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:20f68c15dd397b960a77f149326b63fe nmdc:dobj-11-dh3v6417 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ttd7zm04.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eff2bb184ddf83addd436dfc18f86a5f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfmgas-11-ttd7zm04.1/nmdc_wfmgas-11-ttd7zm04.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eff2bb184ddf83addd436dfc18f86a5f nmdc:dobj-11-br4ghb56 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ttd7zm04.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de9ef5a344ffc1cdc49cfe34eedea78c +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfmgas-11-ttd7zm04.1/nmdc_wfmgas-11-ttd7zm04.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de9ef5a344ffc1cdc49cfe34eedea78c nmdc:dobj-11-xgnv7n83 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-ttd7zm04.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:bff1ad6f01056c624761521883e250a2 nmdc:wfmgas-11-ttd7zm04.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-khgaac94 +INFO:root:New activity id created for nmdc:omprc-11-khgaac94 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-8cqnm797.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cebbd0a5cd108a40db64a3d8b7ccf532 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cebbd0a5cd108a40db64a3d8b7ccf532 nmdc:dobj-11-9rahg141 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d90dd78442ccaf29ac535ca39669d14 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d90dd78442ccaf29ac535ca39669d14 nmdc:dobj-11-jr3hnm53 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2100a08e510be54a74e16862a86834d2 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2100a08e510be54a74e16862a86834d2 nmdc:dobj-11-02287918 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bda75de08d593e338cf0964eff722d39 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bda75de08d593e338cf0964eff722d39 nmdc:dobj-11-v9r3t352 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a8b78bb750855d0f132b3aa79e0a5319 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a8b78bb750855d0f132b3aa79e0a5319 nmdc:dobj-11-vwx90g10 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cab6f72ccb985a47b6b3b739563fdb5d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cab6f72ccb985a47b6b3b739563fdb5d nmdc:dobj-11-kxfa7827 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d2034340b5af3d68effd9cc54143bff5 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d2034340b5af3d68effd9cc54143bff5 nmdc:dobj-11-ekg52y97 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:43dfc51d1c3a55d985594cd1cc8c7d11 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:43dfc51d1c3a55d985594cd1cc8c7d11 nmdc:dobj-11-ck534780 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b5e716ed72935137a306b714d670362 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-khgaac94/nmdc:wfrbt-11-8cqnm797.1/nmdc_wfrbt-11-8cqnm797.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b5e716ed72935137a306b714d670362 nmdc:dobj-11-en0g9g83 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-khgaac94 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-8cqnm797.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:bff1ad6f01056c624761521883e250a2 nmdc:wfrbt-11-8cqnm797.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-khgaac94 +INFO:root:omics_processing_id: nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87af64d0b3516a5f4fa5 nmdc:dobj-11-gg368e32 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-m00yak64 +INFO:root:New activity id created for nmdc:omprc-11-m00yak64 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-my834y23.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrqc-11-my834y23.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8ac3d430b9b1edd97bf3f3d30d9bb72b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrqc-11-my834y23.1/nmdc_wfrqc-11-my834y23.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8ac3d430b9b1edd97bf3f3d30d9bb72b nmdc:dobj-11-gbsx3q74 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-my834y23.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:61ef361a293f0ad45044144cf29f5fd5 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrqc-11-my834y23.1/nmdc_wfrqc-11-my834y23.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:61ef361a293f0ad45044144cf29f5fd5 nmdc:dobj-11-3s89b009 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-my834y23.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:9e7b128c73ad788f62ec52aea24febf2 nmdc:wfrqc-11-my834y23.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-m00yak64 +INFO:root:New activity id created for nmdc:omprc-11-m00yak64 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-872c9x46.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfmgas-11-872c9x46.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:32d7ff803371f29acc09586aecd10522 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfmgas-11-872c9x46.1/nmdc_wfmgas-11-872c9x46.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:32d7ff803371f29acc09586aecd10522 nmdc:dobj-11-30hgw119 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-872c9x46.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:111f2b740bb06ac5a570d8cc5e806565 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfmgas-11-872c9x46.1/nmdc_wfmgas-11-872c9x46.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:111f2b740bb06ac5a570d8cc5e806565 nmdc:dobj-11-f528e185 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-872c9x46.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4c2410d0acaa0e0f9b23c6dc5a6c6404 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfmgas-11-872c9x46.1/nmdc_wfmgas-11-872c9x46.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4c2410d0acaa0e0f9b23c6dc5a6c6404 nmdc:dobj-11-04r3na51 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-872c9x46.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b8c05eb7585674fed2bf494b33b653a8 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfmgas-11-872c9x46.1/nmdc_wfmgas-11-872c9x46.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b8c05eb7585674fed2bf494b33b653a8 nmdc:dobj-11-42b8s864 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-872c9x46.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2803cb6079919601bdca9f5ecf2c6b7d +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfmgas-11-872c9x46.1/nmdc_wfmgas-11-872c9x46.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2803cb6079919601bdca9f5ecf2c6b7d nmdc:dobj-11-4ta2ct95 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-872c9x46.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:9e7b128c73ad788f62ec52aea24febf2 nmdc:wfmgas-11-872c9x46.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-m00yak64 +INFO:root:New activity id created for nmdc:omprc-11-m00yak64 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-h95k0c07.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d46b36f1debe3dd62f905554e169a49c +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d46b36f1debe3dd62f905554e169a49c nmdc:dobj-11-32fr8a84 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ebbd2bb63b6f6419474964e77ee3cdc +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ebbd2bb63b6f6419474964e77ee3cdc nmdc:dobj-11-0bpzb927 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82f90ea597869d6c52c36d33ec0d52e6 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82f90ea597869d6c52c36d33ec0d52e6 nmdc:dobj-11-kyztw751 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:733f0d9b1bc5adce174338caca17e47f +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:733f0d9b1bc5adce174338caca17e47f nmdc:dobj-11-b9d4hv89 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:262cd7350e5b90ff64cb6e418879ee67 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:262cd7350e5b90ff64cb6e418879ee67 nmdc:dobj-11-f5ah9512 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb6fb77b167a40976a1e9cb5895c0032 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb6fb77b167a40976a1e9cb5895c0032 nmdc:dobj-11-y2pv5s90 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6b2f87f0bf5b5bfc8639c7019e409435 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6b2f87f0bf5b5bfc8639c7019e409435 nmdc:dobj-11-w3qprv64 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f493541e50ff3fd48ffe42ba0f75ff11 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f493541e50ff3fd48ffe42ba0f75ff11 nmdc:dobj-11-80j30x60 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a852a74473e0eca026995f84887a37b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-m00yak64/nmdc:wfrbt-11-h95k0c07.1/nmdc_wfrbt-11-h95k0c07.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a852a74473e0eca026995f84887a37b nmdc:dobj-11-412d2k88 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-m00yak64 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-h95k0c07.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:9e7b128c73ad788f62ec52aea24febf2 nmdc:wfrbt-11-h95k0c07.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-m00yak64 +INFO:root:omics_processing_id: nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86e564d0b3516a5f4f62 nmdc:dobj-11-rt3yqp77 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-v4rgxw98 +INFO:root:New activity id created for nmdc:omprc-11-v4rgxw98 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-j0th8319.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrqc-11-j0th8319.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a9457902a473d1f5c218846222ea0d10 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrqc-11-j0th8319.1/nmdc_wfrqc-11-j0th8319.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a9457902a473d1f5c218846222ea0d10 nmdc:dobj-11-2ttx0131 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j0th8319.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b779954aebf7bb9fad29ee05905944f1 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrqc-11-j0th8319.1/nmdc_wfrqc-11-j0th8319.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b779954aebf7bb9fad29ee05905944f1 nmdc:dobj-11-n1qc8k37 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-j0th8319.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:29afabd73ba8023e17d73923392f2e96 nmdc:wfrqc-11-j0th8319.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-v4rgxw98 +INFO:root:New activity id created for nmdc:omprc-11-v4rgxw98 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xv9v7e34.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfmgas-11-xv9v7e34.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6638949f95bea541fc2988f3d2cb90f5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfmgas-11-xv9v7e34.1/nmdc_wfmgas-11-xv9v7e34.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6638949f95bea541fc2988f3d2cb90f5 nmdc:dobj-11-frr1jd93 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xv9v7e34.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1ef33b75e70ad9125f49a28cc7da61ef +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfmgas-11-xv9v7e34.1/nmdc_wfmgas-11-xv9v7e34.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1ef33b75e70ad9125f49a28cc7da61ef nmdc:dobj-11-gq54cn30 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xv9v7e34.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b44f4a7e2ae9df7652faa9b71e60e681 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfmgas-11-xv9v7e34.1/nmdc_wfmgas-11-xv9v7e34.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b44f4a7e2ae9df7652faa9b71e60e681 nmdc:dobj-11-a1bsq587 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xv9v7e34.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4447f9f54be19281b1514d6a6d20967a +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfmgas-11-xv9v7e34.1/nmdc_wfmgas-11-xv9v7e34.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4447f9f54be19281b1514d6a6d20967a nmdc:dobj-11-s3m68p50 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xv9v7e34.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:99e63c7c499c0b0330d1b52ede9905f6 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfmgas-11-xv9v7e34.1/nmdc_wfmgas-11-xv9v7e34.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:99e63c7c499c0b0330d1b52ede9905f6 nmdc:dobj-11-cpa50x96 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xv9v7e34.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:29afabd73ba8023e17d73923392f2e96 nmdc:wfmgas-11-xv9v7e34.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-v4rgxw98 +INFO:root:New activity id created for nmdc:omprc-11-v4rgxw98 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-rd1bw054.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5258264f975bf48082783a25556b957e +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5258264f975bf48082783a25556b957e nmdc:dobj-11-wm2j7209 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:86581ce4e36f4e295bc0ff99ffaeb03b +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:86581ce4e36f4e295bc0ff99ffaeb03b nmdc:dobj-11-tqd65r85 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:10f8b3ccd601ed80ecbd1cc565fa4cad +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:10f8b3ccd601ed80ecbd1cc565fa4cad nmdc:dobj-11-yzgzx635 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:78a6e598ce521cae8f3cb8ef1670374c +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:78a6e598ce521cae8f3cb8ef1670374c nmdc:dobj-11-2yctwf63 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9d8ea04b823faa60f86793512279f108 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9d8ea04b823faa60f86793512279f108 nmdc:dobj-11-sxrzrg50 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6faaecfad62bb2a4df8a9523134b7ba6 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6faaecfad62bb2a4df8a9523134b7ba6 nmdc:dobj-11-jexxs339 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b732bbf269aedf0dd972f62b663e712e +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b732bbf269aedf0dd972f62b663e712e nmdc:dobj-11-w2e2wf63 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7966c4971623433fb3eac159593e0b1b +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7966c4971623433fb3eac159593e0b1b nmdc:dobj-11-wd9pby76 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:081329836d7f9f5027a068b58706a19e +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-v4rgxw98/nmdc:wfrbt-11-rd1bw054.1/nmdc_wfrbt-11-rd1bw054.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:081329836d7f9f5027a068b58706a19e nmdc:dobj-11-m5knnz08 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-v4rgxw98 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-rd1bw054.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:29afabd73ba8023e17d73923392f2e96 nmdc:wfrbt-11-rd1bw054.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-v4rgxw98 +INFO:root:omics_processing_id: nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87b764d0b3516a5f4fa8 nmdc:dobj-11-0g52d157 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-p9tfam59 +INFO:root:New activity id created for nmdc:omprc-11-p9tfam59 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-f4s80461.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfrqc-11-f4s80461.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a782f673c7927e4b1ed6ff0f8de79f0d +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfrqc-11-f4s80461.1/nmdc_wfrqc-11-f4s80461.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a782f673c7927e4b1ed6ff0f8de79f0d nmdc:dobj-11-x3rvj456 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-f4s80461.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6d2837f047c5b3f9f07e75f16d1c519e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfrqc-11-f4s80461.1/nmdc_wfrqc-11-f4s80461.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6d2837f047c5b3f9f07e75f16d1c519e nmdc:dobj-11-thxdz215 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-f4s80461.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fcfbf8a3c6be76506f5e46683e0a6435 nmdc:wfrqc-11-f4s80461.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-p9tfam59 +INFO:root:New activity id created for nmdc:omprc-11-p9tfam59 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8caja377.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfmgas-11-8caja377.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7feeaa2ffba08f39b922dc154dc286bc +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfmgas-11-8caja377.1/nmdc_wfmgas-11-8caja377.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7feeaa2ffba08f39b922dc154dc286bc nmdc:dobj-11-40ctx176 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8caja377.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aaa2e881896f7ab7614e860b201262bb +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfmgas-11-8caja377.1/nmdc_wfmgas-11-8caja377.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aaa2e881896f7ab7614e860b201262bb nmdc:dobj-11-shhww038 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8caja377.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7d5e52f41560c0f39c382b48cbdc410d +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfmgas-11-8caja377.1/nmdc_wfmgas-11-8caja377.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7d5e52f41560c0f39c382b48cbdc410d nmdc:dobj-11-1qp6wg80 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8caja377.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa229fd80137a13d8a27036c0cbbb30e +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfmgas-11-8caja377.1/nmdc_wfmgas-11-8caja377.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa229fd80137a13d8a27036c0cbbb30e nmdc:dobj-11-be4b8x13 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8caja377.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:545085d85d5171d44c6dd0b64796b135 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfmgas-11-8caja377.1/nmdc_wfmgas-11-8caja377.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:545085d85d5171d44c6dd0b64796b135 nmdc:dobj-11-q174zc40 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nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-94a5z520.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:337e2b5cf9b20e2a292c1d0942b0d5f4 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfrbt-11-94a5z520.1/nmdc_wfrbt-11-94a5z520.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:337e2b5cf9b20e2a292c1d0942b0d5f4 nmdc:dobj-11-j2vvgy90 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-94a5z520.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f18530a05f07e09b177f876b3b648ddf +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfrbt-11-94a5z520.1/nmdc_wfrbt-11-94a5z520.1_centrifuge_krona.html 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nmdc:bf74dc09be7b799dd5da0a96717406f8 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfrbt-11-94a5z520.1/nmdc_wfrbt-11-94a5z520.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bf74dc09be7b799dd5da0a96717406f8 nmdc:dobj-11-a7g1x666 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-94a5z520.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:02810564e4debf7cdeae327de83e34e2 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-p9tfam59/nmdc:wfrbt-11-94a5z520.1/nmdc_wfrbt-11-94a5z520.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:02810564e4debf7cdeae327de83e34e2 nmdc:dobj-11-r6scp144 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-p9tfam59 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-94a5z520.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fcfbf8a3c6be76506f5e46683e0a6435 nmdc:wfrbt-11-94a5z520.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-p9tfam59 +INFO:root:omics_processing_id: nmdc:omprc-11-zvtmqd80 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87bd64d0b3516a5f4faa nmdc:dobj-11-zddrdf33 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zvtmqd80 +INFO:root:New activity id created for nmdc:omprc-11-zvtmqd80 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-3nssq747.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvtmqd80/nmdc:wfrqc-11-3nssq747.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c8a90e801a983697a4d3388d6fe816b7 +INFO:root:New file path computed for 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nmdc_wfrqc-11-3nssq747.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4a9d1ae5eef8c33bdc6843e9e423a474 nmdc:wfrqc-11-3nssq747.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zvtmqd80 +INFO:root:New activity id created for nmdc:omprc-11-zvtmqd80 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-am0cg489.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvtmqd80/nmdc:wfmgas-11-am0cg489.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c4c8c0eeb4f25cde76403ad20fda51fd +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvtmqd80/nmdc:wfmgas-11-am0cg489.1/nmdc_wfmgas-11-am0cg489.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c4c8c0eeb4f25cde76403ad20fda51fd nmdc:dobj-11-fa0ys702 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zvtmqd80 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nmdc:1cba7fad374014aca84d100e85b51344 nmdc:dobj-11-sr0fbb80 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zvtmqd80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-am0cg489.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9e5a49a487b6e954ba5f9a10b7fff2af +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvtmqd80/nmdc:wfmgas-11-am0cg489.1/nmdc_wfmgas-11-am0cg489.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9e5a49a487b6e954ba5f9a10b7fff2af nmdc:dobj-11-zmszzp97 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-zvtmqd80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-am0cg489.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f0f47a1627bb4da05888e56df9ef8b6f +INFO:root:New file path computed for Assembly Coverage BAM: 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report for nmdc:omprc-11-zvtmqd80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bhd8c440.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3368419acd5e7e088fbf7c9d2cd4d1f +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zvtmqd80/nmdc:wfrbt-11-bhd8c440.1/nmdc_wfrbt-11-bhd8c440.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3368419acd5e7e088fbf7c9d2cd4d1f nmdc:dobj-11-p0xmf511 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zvtmqd80 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bhd8c440.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:79c11d55a5e5bc1b584ae253d3d257e9 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfrqc-11-qqemhv87.1/nmdc_wfrqc-11-qqemhv87.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de10b63f9e7b663c06ca4a78aebd1cb2 nmdc:dobj-11-7eex0602 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qqemhv87.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:5be8577a376c7dec956ad257a385125b nmdc:wfrqc-11-qqemhv87.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-7keedq73 +INFO:root:New activity id created for nmdc:omprc-11-7keedq73 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-h5fcf931.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfmgas-11-h5fcf931.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e59a7ad0b531c4791450019a8aadbc42 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfmgas-11-h5fcf931.1/nmdc_wfmgas-11-h5fcf931.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e59a7ad0b531c4791450019a8aadbc42 nmdc:dobj-11-kjmmwj30 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h5fcf931.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5ec0113d1df6e2adc5e3f59e433b15b6 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfmgas-11-h5fcf931.1/nmdc_wfmgas-11-h5fcf931.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5ec0113d1df6e2adc5e3f59e433b15b6 nmdc:dobj-11-sm14yd61 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h5fcf931.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:07536ba9d3ba71dc777db9f20a9082ef +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfmgas-11-h5fcf931.1/nmdc_wfmgas-11-h5fcf931.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:07536ba9d3ba71dc777db9f20a9082ef nmdc:dobj-11-hgsb9944 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-h5fcf931.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ee9f177ab7385365d32272bb2713fd4e +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfmgas-11-h5fcf931.1/nmdc_wfmgas-11-h5fcf931.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ee9f177ab7385365d32272bb2713fd4e nmdc:dobj-11-64g1vb79 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfrbt-11-f3w5ha47.1/nmdc_wfrbt-11-f3w5ha47.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6ac8711e28d251ca351e4da4af6ffed5 nmdc:dobj-11-bdfmvd10 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f3w5ha47.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c70423dc5b92f4c74ed4178dde179f59 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfrbt-11-f3w5ha47.1/nmdc_wfrbt-11-f3w5ha47.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c70423dc5b92f4c74ed4178dde179f59 nmdc:dobj-11-ckat7p74 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-7keedq73 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfrbt-11-f3w5ha47.1/nmdc_wfrbt-11-f3w5ha47.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e1c0ea373e7513b319a516358a6b216 nmdc:dobj-11-sz11n379 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f3w5ha47.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d64a6ff557dd72a5a22557cd8a7a32e +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfrbt-11-f3w5ha47.1/nmdc_wfrbt-11-f3w5ha47.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d64a6ff557dd72a5a22557cd8a7a32e nmdc:dobj-11-qqbgek12 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f3w5ha47.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3a11a29f40628d4d53bb894d20fb8e2d +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfrbt-11-f3w5ha47.1/nmdc_wfrbt-11-f3w5ha47.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3a11a29f40628d4d53bb894d20fb8e2d nmdc:dobj-11-zxzrd568 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f3w5ha47.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:36543581a3d7ad606ed293691e8bec10 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfrbt-11-f3w5ha47.1/nmdc_wfrbt-11-f3w5ha47.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:36543581a3d7ad606ed293691e8bec10 nmdc:dobj-11-b07tmv52 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f3w5ha47.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e6fa5b3755e460f7547c44ce645397d3 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-7keedq73/nmdc:wfrbt-11-f3w5ha47.1/nmdc_wfrbt-11-f3w5ha47.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e6fa5b3755e460f7547c44ce645397d3 nmdc:dobj-11-8qh9c950 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-7keedq73 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-f3w5ha47.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:5be8577a376c7dec956ad257a385125b nmdc:wfrbt-11-f3w5ha47.1 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created for nmdc:omprc-11-03ayck44 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-xay21516.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfmgas-11-xay21516.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1229b6920742c35834f1975304cce8a7 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfmgas-11-xay21516.1/nmdc_wfmgas-11-xay21516.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1229b6920742c35834f1975304cce8a7 nmdc:dobj-11-jv9zs835 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xay21516.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:22a38ecea9527d1117fb81706365c4a4 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfmgas-11-xay21516.1/nmdc_wfmgas-11-xay21516.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:22a38ecea9527d1117fb81706365c4a4 nmdc:dobj-11-rg37v755 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xay21516.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7f981111356f72b6c6342cd9324dfc51 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfmgas-11-xay21516.1/nmdc_wfmgas-11-xay21516.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:7f981111356f72b6c6342cd9324dfc51 nmdc:dobj-11-a5n94233 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xay21516.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:05421fb3b2f8590b8cf8a4f910983e6f +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfmgas-11-xay21516.1/nmdc_wfmgas-11-xay21516.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:05421fb3b2f8590b8cf8a4f910983e6f nmdc:dobj-11-tbdpgh69 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xay21516.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:afeb9654bd0dcb0cc7bcd090fea321a9 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfmgas-11-xay21516.1/nmdc_wfmgas-11-xay21516.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:afeb9654bd0dcb0cc7bcd090fea321a9 nmdc:dobj-11-cs88gd94 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-xay21516.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:6156ca2868babc1b9596546b81e4351f nmdc:wfmgas-11-xay21516.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-03ayck44 +INFO:root:New activity id created for nmdc:omprc-11-03ayck44 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-bg73n468.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfrbt-11-bg73n468.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98c37d62972a3f792cd4dd9b05b321d3 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfrbt-11-bg73n468.1/nmdc_wfrbt-11-bg73n468.1_gottcha2_report.tsv 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfrbt-11-bg73n468.1/nmdc_wfrbt-11-bg73n468.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1337e91758d8ea4ad68e558b938d03ef nmdc:dobj-11-thz9mx97 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bg73n468.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4668fb19499d7c49a3fbd1d98c854711 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfrbt-11-bg73n468.1/nmdc_wfrbt-11-bg73n468.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4668fb19499d7c49a3fbd1d98c854711 nmdc:dobj-11-cg295186 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bg73n468.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5bab9ac33adeaccfd7332f7798a677d2 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfrbt-11-bg73n468.1/nmdc_wfrbt-11-bg73n468.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5bab9ac33adeaccfd7332f7798a677d2 nmdc:dobj-11-kwfxdh50 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bg73n468.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e492825f92855c1332485edccd97409d +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfrbt-11-bg73n468.1/nmdc_wfrbt-11-bg73n468.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e492825f92855c1332485edccd97409d nmdc:dobj-11-qezd7v60 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bg73n468.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3ee630974cb8742e15337894de0bf16 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-03ayck44/nmdc:wfrbt-11-bg73n468.1/nmdc_wfrbt-11-bg73n468.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3ee630974cb8742e15337894de0bf16 nmdc:dobj-11-p1sv7y15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bg73n468.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: 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nmdc:omprc-11-03ayck44 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-bg73n468.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:6156ca2868babc1b9596546b81e4351f nmdc:wfrbt-11-bg73n468.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-03ayck44 +INFO:root:omics_processing_id: nmdc:omprc-11-g9npvr79 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b86dc64d0b3516a5f4f5f nmdc:dobj-11-2tmhjt42 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-g9npvr79 +INFO:root:New activity id created for nmdc:omprc-11-g9npvr79 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-n9t4gv74.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9npvr79/nmdc:wfrqc-11-n9t4gv74.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3cd40e2572881e4c6a228b23db3ca41a +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9npvr79/nmdc:wfrqc-11-n9t4gv74.1/nmdc_wfrqc-11-n9t4gv74.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3cd40e2572881e4c6a228b23db3ca41a nmdc:dobj-11-64fpf330 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-g9npvr79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n9t4gv74.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:688237405acd3cf4f0319b562a512700 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9npvr79/nmdc:wfrqc-11-n9t4gv74.1/nmdc_wfrqc-11-n9t4gv74.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:688237405acd3cf4f0319b562a512700 nmdc:dobj-11-y17g3f41 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-g9npvr79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-n9t4gv74.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:4116632707c28903a4d804f68a7b0365 nmdc:wfrqc-11-n9t4gv74.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-g9npvr79 +INFO:root:New activity id created for nmdc:omprc-11-g9npvr79 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-mdb1xp88.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9npvr79/nmdc:wfmgas-11-mdb1xp88.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f8a03c81b395526f3ac95ce1437e9ef +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9npvr79/nmdc:wfmgas-11-mdb1xp88.1/nmdc_wfmgas-11-mdb1xp88.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f8a03c81b395526f3ac95ce1437e9ef nmdc:dobj-11-gv48k587 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-g9npvr79 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nmdc:9e84736eeb95ee67e6623033efb09560 nmdc:dobj-11-71k3qd64 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-g9npvr79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mdb1xp88.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c3bdd512990c6d3eb5705322061d7231 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9npvr79/nmdc:wfmgas-11-mdb1xp88.1/nmdc_wfmgas-11-mdb1xp88.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c3bdd512990c6d3eb5705322061d7231 nmdc:dobj-11-vrtany28 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-g9npvr79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-mdb1xp88.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:7fa558a5645205fa09786d53b7b453c8 +INFO:root:New file path computed for Assembly Coverage BAM: 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report for nmdc:omprc-11-g9npvr79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-n1qbe650.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6f53c5ec13b270aa8fd2b7ad75f5843c +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9npvr79/nmdc:wfrbt-11-n1qbe650.1/nmdc_wfrbt-11-n1qbe650.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6f53c5ec13b270aa8fd2b7ad75f5843c nmdc:dobj-11-02v88n72 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-g9npvr79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-n1qbe650.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90aa477af978c22072ec6fa9e2a44fd6 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: 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+INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-g9npvr79/nmdc:wfrbt-11-n1qbe650.1/nmdc_wfrbt-11-n1qbe650.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:094ff744578ba19a6834008c6a4f14ce nmdc:dobj-11-s4hhh297 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-g9npvr79 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-n1qbe650.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:4116632707c28903a4d804f68a7b0365 nmdc:wfrbt-11-n1qbe650.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-g9npvr79 +INFO:root:omics_processing_id: nmdc:omprc-11-abj20g75 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87e264d0b3516a5f4fb6 nmdc:dobj-11-2fffp958 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-abj20g75 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path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abj20g75/nmdc:wfmgas-11-p2s9tf67.1/nmdc_wfmgas-11-p2s9tf67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a5b181dfed4e930d6c68f65a17d53e5b nmdc:dobj-11-ys989m34 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-abj20g75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p2s9tf67.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8fe50480a06791d759b49c47c06b7ef3 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abj20g75/nmdc:wfmgas-11-p2s9tf67.1/nmdc_wfmgas-11-p2s9tf67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8fe50480a06791d759b49c47c06b7ef3 nmdc:dobj-11-xh6xmr02 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-abj20g75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p2s9tf67.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:98e497b81f00d5791b9ebe414350e93e +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abj20g75/nmdc:wfmgas-11-p2s9tf67.1/nmdc_wfmgas-11-p2s9tf67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:98e497b81f00d5791b9ebe414350e93e nmdc:dobj-11-f7sbb708 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-abj20g75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-p2s9tf67.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2600d0741334b6e7b59e34a983b87a18 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abj20g75/nmdc:wfmgas-11-p2s9tf67.1/nmdc_wfmgas-11-p2s9tf67.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2600d0741334b6e7b59e34a983b87a18 nmdc:dobj-11-7x48qp47 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nmdc:890662b712d8590ef72598ead0b8646e nmdc:dobj-11-j4h6ax03 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-abj20g75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-38g0fs97.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a7bc08e95abaf614dd44e340d4c3f559 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-abj20g75/nmdc:wfrbt-11-38g0fs97.1/nmdc_wfrbt-11-38g0fs97.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a7bc08e95abaf614dd44e340d4c3f559 nmdc:dobj-11-y1xrym42 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-abj20g75 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-38g0fs97.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:21d523e4045c130c1c62404601ff11f5 nmdc:wfrbt-11-38g0fs97.1 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created for nmdc:omprc-11-6z3pwp16 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-newf2g75.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z3pwp16/nmdc:wfmgas-11-newf2g75.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e4db6f9e965e844511d808747a434184 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z3pwp16/nmdc:wfmgas-11-newf2g75.1/nmdc_wfmgas-11-newf2g75.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e4db6f9e965e844511d808747a434184 nmdc:dobj-11-799cnz97 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-6z3pwp16 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-newf2g75.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:58143aa3bdae270998ea70dc51dcba05 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z3pwp16/nmdc:wfmgas-11-newf2g75.1/nmdc_wfmgas-11-newf2g75.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:58143aa3bdae270998ea70dc51dcba05 nmdc:dobj-11-n3ewg577 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-6z3pwp16 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-newf2g75.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:922918505ffe3ec0f02a12039feb9c90 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z3pwp16/nmdc:wfmgas-11-newf2g75.1/nmdc_wfmgas-11-newf2g75.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:922918505ffe3ec0f02a12039feb9c90 nmdc:dobj-11-sc56ge80 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-6z3pwp16 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-newf2g75.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a0c1413211c416c9e0bbe06c3cdbbf4c +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z3pwp16/nmdc:wfmgas-11-newf2g75.1/nmdc_wfmgas-11-newf2g75.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a0c1413211c416c9e0bbe06c3cdbbf4c nmdc:dobj-11-xp3kx287 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-6z3pwp16 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-newf2g75.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1d2fee55d925e1021234ae6e14cc4d9b +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z3pwp16/nmdc:wfmgas-11-newf2g75.1/nmdc_wfmgas-11-newf2g75.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1d2fee55d925e1021234ae6e14cc4d9b nmdc:dobj-11-7sfaay61 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z3pwp16/nmdc:wfrbt-11-ss611t77.1/nmdc_wfrbt-11-ss611t77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:751aabbc0408b874f967308cc57c076b nmdc:dobj-11-8gbsad59 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-6z3pwp16 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ss611t77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f80175ef97f65b404d45f742fe6bbb1a +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-6z3pwp16/nmdc:wfrbt-11-ss611t77.1/nmdc_wfrbt-11-ss611t77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f80175ef97f65b404d45f742fe6bbb1a nmdc:dobj-11-rg96f938 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for 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nmdc:omprc-11-6z3pwp16 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ss611t77.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:882054466780d767f32534923f0e598b nmdc:wfrbt-11-ss611t77.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-6z3pwp16 +INFO:root:omics_processing_id: nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87ce64d0b3516a5f4fb0 nmdc:dobj-11-pknrem95 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-keenj824 +INFO:root:New activity id created for nmdc:omprc-11-keenj824 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-tzf4d453.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrqc-11-tzf4d453.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2765385b3e36cb006a570c43230ef424 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrqc-11-tzf4d453.1/nmdc_wfrqc-11-tzf4d453.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2765385b3e36cb006a570c43230ef424 nmdc:dobj-11-pgans791 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tzf4d453.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa5de59dac5e4d4ae34b404d684c6061 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrqc-11-tzf4d453.1/nmdc_wfrqc-11-tzf4d453.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa5de59dac5e4d4ae34b404d684c6061 nmdc:dobj-11-z0ygkb74 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-tzf4d453.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:2e0118504a4a8a5f3b1ffcf90010acd3 nmdc:wfrqc-11-tzf4d453.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-keenj824 +INFO:root:New activity id created for nmdc:omprc-11-keenj824 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-v72gw685.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfmgas-11-v72gw685.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f84210a0a991576d3f6590a7958fc0b5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfmgas-11-v72gw685.1/nmdc_wfmgas-11-v72gw685.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f84210a0a991576d3f6590a7958fc0b5 nmdc:dobj-11-j2nh9887 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v72gw685.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bb05431da059d5afc35245a0dfa0bee8 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfmgas-11-v72gw685.1/nmdc_wfmgas-11-v72gw685.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bb05431da059d5afc35245a0dfa0bee8 nmdc:dobj-11-0ybe2v36 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v72gw685.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1f36c33c12545e0946bf749eb39660d0 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfmgas-11-v72gw685.1/nmdc_wfmgas-11-v72gw685.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1f36c33c12545e0946bf749eb39660d0 nmdc:dobj-11-392qw729 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v72gw685.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8d9bfcb2c90d135cd5fed99c0c6c41e0 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfmgas-11-v72gw685.1/nmdc_wfmgas-11-v72gw685.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8d9bfcb2c90d135cd5fed99c0c6c41e0 nmdc:dobj-11-bkb79x77 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v72gw685.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e42099e3110b4348ca3ffc7fe5d779d6 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfmgas-11-v72gw685.1/nmdc_wfmgas-11-v72gw685.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e42099e3110b4348ca3ffc7fe5d779d6 nmdc:dobj-11-mz9a6x94 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-v72gw685.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:2e0118504a4a8a5f3b1ffcf90010acd3 nmdc:wfmgas-11-v72gw685.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-keenj824 +INFO:root:New activity id created for nmdc:omprc-11-keenj824 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-vnnabe44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3b0278fe5f980c03ead17c0c3f383b7 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3b0278fe5f980c03ead17c0c3f383b7 nmdc:dobj-11-v2vhrs41 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9fb0d1465d38dcbfa647b17b860ee24b +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9fb0d1465d38dcbfa647b17b860ee24b nmdc:dobj-11-dnx18f98 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:de4b92b05885775dc8c52710a81381b3 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:de4b92b05885775dc8c52710a81381b3 nmdc:dobj-11-d1pty753 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dc417684dddd7409929448da514302b3 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dc417684dddd7409929448da514302b3 nmdc:dobj-11-rzhytt55 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5fe233e83aef43c8d744036a84df5bc5 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5fe233e83aef43c8d744036a84df5bc5 nmdc:dobj-11-3w42nn44 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a19d6d17cc7e17520da5610eb85a852 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a19d6d17cc7e17520da5610eb85a852 nmdc:dobj-11-jt64dh55 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:738d650512ef7034c9a5344d22ae50a3 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:738d650512ef7034c9a5344d22ae50a3 nmdc:dobj-11-nk3pna60 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f90a305886de117277c0535b81b3f0e1 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f90a305886de117277c0535b81b3f0e1 nmdc:dobj-11-vtrz8w64 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:675462f5a47b0b01cced16c4cf0f488f +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-keenj824/nmdc:wfrbt-11-vnnabe44.1/nmdc_wfrbt-11-vnnabe44.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:675462f5a47b0b01cced16c4cf0f488f nmdc:dobj-11-6kvkfr55 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-keenj824 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-vnnabe44.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:2e0118504a4a8a5f3b1ffcf90010acd3 nmdc:wfrbt-11-vnnabe44.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-keenj824 +INFO:root:omics_processing_id: nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87e964d0b3516a5f4fb8 nmdc:dobj-11-c0h2ss35 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-0t04n652 +INFO:root:New activity id created for nmdc:omprc-11-0t04n652 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-wz8vdg96.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfrqc-11-wz8vdg96.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9c7a946f604fe887ec7905c9b36b9913 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfrqc-11-wz8vdg96.1/nmdc_wfrqc-11-wz8vdg96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9c7a946f604fe887ec7905c9b36b9913 nmdc:dobj-11-9kf58a79 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wz8vdg96.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:315c0ab22dd71c0f78f87770d71eb965 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfrqc-11-wz8vdg96.1/nmdc_wfrqc-11-wz8vdg96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:315c0ab22dd71c0f78f87770d71eb965 nmdc:dobj-11-60kp4j68 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-wz8vdg96.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:7d0ce07a66c5014b082272573e2f3916 nmdc:wfrqc-11-wz8vdg96.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-0t04n652 +INFO:root:New activity id created for nmdc:omprc-11-0t04n652 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-000h5938.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfmgas-11-000h5938.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ef48498d273398a1030698f0ebd3d442 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfmgas-11-000h5938.1/nmdc_wfmgas-11-000h5938.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ef48498d273398a1030698f0ebd3d442 nmdc:dobj-11-rty32134 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-000h5938.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e1e35b5c895dd5430963900e62303b01 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfmgas-11-000h5938.1/nmdc_wfmgas-11-000h5938.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e1e35b5c895dd5430963900e62303b01 nmdc:dobj-11-ef8waz90 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-000h5938.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ac5cdc037548d27cb0f2b4c43814f4a +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfmgas-11-000h5938.1/nmdc_wfmgas-11-000h5938.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ac5cdc037548d27cb0f2b4c43814f4a nmdc:dobj-11-73h77x81 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-000h5938.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:90b6c3a34089fbc2dbfe056fcbcea0da +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfmgas-11-000h5938.1/nmdc_wfmgas-11-000h5938.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:90b6c3a34089fbc2dbfe056fcbcea0da nmdc:dobj-11-xpyer125 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GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfrbt-11-wqv01a20.1/nmdc_wfrbt-11-wqv01a20.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f993ec5d96b2f457eb4d46f3c663fef4 nmdc:dobj-11-v03kxx02 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wqv01a20.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e7b65da8c837474e94119109ad306ee +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfrbt-11-wqv01a20.1/nmdc_wfrbt-11-wqv01a20.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e7b65da8c837474e94119109ad306ee nmdc:dobj-11-v4va9q63 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-0t04n652 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nmdc_wfrbt-11-wqv01a20.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:64737f5b87f3fa93bf15ddb7efe04846 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfrbt-11-wqv01a20.1/nmdc_wfrbt-11-wqv01a20.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:64737f5b87f3fa93bf15ddb7efe04846 nmdc:dobj-11-e50h7g13 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wqv01a20.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5a0b755f1d0eabdc2c0a723799889925 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfrbt-11-wqv01a20.1/nmdc_wfrbt-11-wqv01a20.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5a0b755f1d0eabdc2c0a723799889925 nmdc:dobj-11-w5m91y97 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wqv01a20.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e00dedcdd76d1101cfd015d788d58e5a +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-0t04n652/nmdc:wfrbt-11-wqv01a20.1/nmdc_wfrbt-11-wqv01a20.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e00dedcdd76d1101cfd015d788d58e5a nmdc:dobj-11-fn3za295 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-0t04n652 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-wqv01a20.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:7d0ce07a66c5014b082272573e2f3916 nmdc:wfrbt-11-wqv01a20.1 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nmdc:d3e544fc85629ef33bd05c4c2fe7e070 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9bvyt264/nmdc:wfrbt-11-yqgmfz29.1/nmdc_wfrbt-11-yqgmfz29.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3e544fc85629ef33bd05c4c2fe7e070 nmdc:dobj-11-1d1sm647 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9bvyt264 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yqgmfz29.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d3a881fc2810136279586efc69ad9407 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9bvyt264/nmdc:wfrbt-11-yqgmfz29.1/nmdc_wfrbt-11-yqgmfz29.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d3a881fc2810136279586efc69ad9407 nmdc:dobj-11-vs704871 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9bvyt264 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-yqgmfz29.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:bfccdfaf9ea4406c2ca88c34de7d9d17 nmdc:wfrbt-11-yqgmfz29.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9bvyt264 +INFO:root:omics_processing_id: nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87d564d0b3516a5f4fb2 nmdc:dobj-11-ws895a26 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-q17x6w88 +INFO:root:New activity id created for nmdc:omprc-11-q17x6w88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qaz26636.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrqc-11-qaz26636.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cd5fb82f4c628f27c60dfb3f72547eb5 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrqc-11-qaz26636.1/nmdc_wfrqc-11-qaz26636.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cd5fb82f4c628f27c60dfb3f72547eb5 nmdc:dobj-11-msxs8105 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qaz26636.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:bde363304a610489ba1b3c4cadcd2b8a +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrqc-11-qaz26636.1/nmdc_wfrqc-11-qaz26636.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:bde363304a610489ba1b3c4cadcd2b8a nmdc:dobj-11-zpxyj686 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qaz26636.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:a10b9b9e42d2a8510eb23f1a813b3411 nmdc:wfrqc-11-qaz26636.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-q17x6w88 +INFO:root:New activity id created for nmdc:omprc-11-q17x6w88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-8k166p87.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfmgas-11-8k166p87.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e0f6bd3ef0fd5aabcd272dc68a14cbb5 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfmgas-11-8k166p87.1/nmdc_wfmgas-11-8k166p87.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e0f6bd3ef0fd5aabcd272dc68a14cbb5 nmdc:dobj-11-97z9vf30 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8k166p87.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e3aece778fb5b2fb200aed2c300b81f1 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfmgas-11-8k166p87.1/nmdc_wfmgas-11-8k166p87.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e3aece778fb5b2fb200aed2c300b81f1 nmdc:dobj-11-z5rg2n98 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8k166p87.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5c123914f4a1bbdd69643e9337b5d525 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfmgas-11-8k166p87.1/nmdc_wfmgas-11-8k166p87.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5c123914f4a1bbdd69643e9337b5d525 nmdc:dobj-11-m2sj9f35 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8k166p87.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:87a83c6496b32c9c09c88b0bf2323203 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfmgas-11-8k166p87.1/nmdc_wfmgas-11-8k166p87.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:87a83c6496b32c9c09c88b0bf2323203 nmdc:dobj-11-2njc0h67 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8k166p87.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:897e36a4d60af112502840e058e41abe +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfmgas-11-8k166p87.1/nmdc_wfmgas-11-8k166p87.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:897e36a4d60af112502840e058e41abe nmdc:dobj-11-2q4bsk38 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-8k166p87.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:a10b9b9e42d2a8510eb23f1a813b3411 nmdc:wfmgas-11-8k166p87.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-q17x6w88 +INFO:root:New activity id created for nmdc:omprc-11-q17x6w88 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-jckv3p71.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrbt-11-jckv3p71.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:dd6bb76f141c8ed336c15935b070f8f6 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrbt-11-jckv3p71.1/nmdc_wfrbt-11-jckv3p71.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:dd6bb76f141c8ed336c15935b070f8f6 nmdc:dobj-11-aayzyd59 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jckv3p71.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:96f26b3ece86aae67d2a03f8f950630a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrbt-11-jckv3p71.1/nmdc_wfrbt-11-jckv3p71.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:96f26b3ece86aae67d2a03f8f950630a nmdc:dobj-11-n46kx434 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jckv3p71.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c7a6cc4cd4c145206ecff43aa20ea94c +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrbt-11-jckv3p71.1/nmdc_wfrbt-11-jckv3p71.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c7a6cc4cd4c145206ecff43aa20ea94c nmdc:dobj-11-w2pzma72 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jckv3p71.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f32d6fcb6ed9e74072defd64894341c8 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrbt-11-jckv3p71.1/nmdc_wfrbt-11-jckv3p71.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f32d6fcb6ed9e74072defd64894341c8 nmdc:dobj-11-c1f77902 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-q17x6w88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-jckv3p71.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:6dc7fdb6fe37ca500f872f514413316c +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-q17x6w88/nmdc:wfrbt-11-jckv3p71.1/nmdc_wfrbt-11-jckv3p71.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:6dc7fdb6fe37ca500f872f514413316c nmdc:dobj-11-6vphj331 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-q17x6w88 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrqc-11-pnge1098.1/nmdc_wfrqc-11-pnge1098.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d7721bcedefdc31b34a23aa450ce6fbd nmdc:dobj-11-zxf9pj52 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-pnge1098.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:fab16be0d832a30e82eec1d822330507 nmdc:wfrqc-11-pnge1098.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-09vha881 +INFO:root:New activity id created for nmdc:omprc-11-09vha881 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-0nz21877.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfmgas-11-0nz21877.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:45f0338d4157326b2c314f2894e42a51 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfmgas-11-0nz21877.1/nmdc_wfmgas-11-0nz21877.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:45f0338d4157326b2c314f2894e42a51 nmdc:dobj-11-m4d3qy04 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0nz21877.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ea6464eab8d30d88bed60d7b61923d3 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfmgas-11-0nz21877.1/nmdc_wfmgas-11-0nz21877.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ea6464eab8d30d88bed60d7b61923d3 nmdc:dobj-11-eh5xvp65 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0nz21877.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:94e554d3299cfe1f8083afaf6d06de4c +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfmgas-11-0nz21877.1/nmdc_wfmgas-11-0nz21877.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:94e554d3299cfe1f8083afaf6d06de4c nmdc:dobj-11-mdptwf47 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0nz21877.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:729963faeed235806bab1359cdcc1e62 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfmgas-11-0nz21877.1/nmdc_wfmgas-11-0nz21877.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:729963faeed235806bab1359cdcc1e62 nmdc:dobj-11-mbvdbp93 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0nz21877.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f81381fdbc26c3303c5493f07374d93 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfmgas-11-0nz21877.1/nmdc_wfmgas-11-0nz21877.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f81381fdbc26c3303c5493f07374d93 nmdc:dobj-11-cn35xk86 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-0nz21877.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:fab16be0d832a30e82eec1d822330507 nmdc:wfmgas-11-0nz21877.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-09vha881 +INFO:root:New activity id created for nmdc:omprc-11-09vha881 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-crh8cz55.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:9a082b9deadebb8c5b0aabcfb96d62fc +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:9a082b9deadebb8c5b0aabcfb96d62fc nmdc:dobj-11-08mewh04 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:346f49e2ae1926b55640fb0f32178e8b +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:346f49e2ae1926b55640fb0f32178e8b nmdc:dobj-11-kc06kk53 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8a1f269f56a920c1dbd4fe57c702831f +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8a1f269f56a920c1dbd4fe57c702831f nmdc:dobj-11-hvffav60 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e0e03fa7c99c10eda7ad07d0aad03245 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e0e03fa7c99c10eda7ad07d0aad03245 nmdc:dobj-11-327n7m10 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:59791c9992f5580d827216936c8e58b5 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:59791c9992f5580d827216936c8e58b5 nmdc:dobj-11-r23pgr46 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4d0ad031d3f083bcb1edc987fbeba5ff +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d0ad031d3f083bcb1edc987fbeba5ff nmdc:dobj-11-m3brvp32 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2119c38c38069cf853fc8a354b11c68a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2119c38c38069cf853fc8a354b11c68a nmdc:dobj-11-yyc0dm48 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3dc4c4f0930c1d9b1bdb55f732efd65e +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3dc4c4f0930c1d9b1bdb55f732efd65e nmdc:dobj-11-98js9140 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d55a47adcec03ae22f1346ac5d623092 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-09vha881/nmdc:wfrbt-11-crh8cz55.1/nmdc_wfrbt-11-crh8cz55.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d55a47adcec03ae22f1346ac5d623092 nmdc:dobj-11-a00r1442 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-09vha881 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-crh8cz55.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:fab16be0d832a30e82eec1d822330507 nmdc:wfrbt-11-crh8cz55.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-09vha881 +INFO:root:omics_processing_id: nmdc:omprc-11-yp178c35 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b87ef64d0b3516a5f4fba nmdc:dobj-11-94dr2h46 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-yp178c35 +INFO:root:New activity id created for nmdc:omprc-11-yp178c35 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-scfcqr13.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yp178c35/nmdc:wfrqc-11-scfcqr13.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:00980ec0a65c67b1958a0f375b1d1e21 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yp178c35/nmdc:wfrqc-11-scfcqr13.1/nmdc_wfrqc-11-scfcqr13.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:00980ec0a65c67b1958a0f375b1d1e21 nmdc:dobj-11-919nmx61 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created for nmdc:omprc-11-yp178c35 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-qszc6j50.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yp178c35/nmdc:wfmgas-11-qszc6j50.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0e1ccb18f7cbb3bd66e750ac3c12a4bc +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yp178c35/nmdc:wfmgas-11-qszc6j50.1/nmdc_wfmgas-11-qszc6j50.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0e1ccb18f7cbb3bd66e750ac3c12a4bc nmdc:dobj-11-350fyt70 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-yp178c35 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qszc6j50.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:723b0dc7fc99e7b676a6cb4d5b1a33a7 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yp178c35/nmdc:wfmgas-11-qszc6j50.1/nmdc_wfmgas-11-qszc6j50.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:723b0dc7fc99e7b676a6cb4d5b1a33a7 nmdc:dobj-11-xre50k20 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-yp178c35 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qszc6j50.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb4806155d767bba66bb2fbf4bc6680f +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-yp178c35/nmdc:wfmgas-11-qszc6j50.1/nmdc_wfmgas-11-qszc6j50.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb4806155d767bba66bb2fbf4bc6680f nmdc:dobj-11-dwzvny07 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-yp178c35 +INFO:nmdc_automation.re_iding.base:new_filename: 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+INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:47ce18d1684a11aaa57a4e884872b41e nmdc:dobj-11-89gpza98 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-9jw2cy65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3h08sa61.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bd5dbcc2984a8e3fefdbb8745017f78 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9jw2cy65/nmdc:wfrbt-11-3h08sa61.1/nmdc_wfrbt-11-3h08sa61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bd5dbcc2984a8e3fefdbb8745017f78 nmdc:dobj-11-ew1aca34 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-9jw2cy65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3h08sa61.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a19f7f7321ef1855deb4f5e0b85a1f0b +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-9jw2cy65/nmdc:wfrbt-11-3h08sa61.1/nmdc_wfrbt-11-3h08sa61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a19f7f7321ef1855deb4f5e0b85a1f0b nmdc:dobj-11-59vzw407 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-9jw2cy65 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3h08sa61.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:d42cfd254896d482d2e3f38ded28fbbf nmdc:wfrbt-11-3h08sa61.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-9jw2cy65 +INFO:root:omics_processing_id: nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b881064d0b3516a5f4fc8 nmdc:dobj-11-q1qv7k43 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-zaxsm356 +INFO:root:New activity id created for nmdc:omprc-11-zaxsm356 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-8xry6z47.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrqc-11-8xry6z47.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:634714bba73881fd251c9d7748bc6276 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrqc-11-8xry6z47.1/nmdc_wfrqc-11-8xry6z47.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:634714bba73881fd251c9d7748bc6276 nmdc:dobj-11-nxay7821 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8xry6z47.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5b50eb12ade75e8808034365f176a897 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrqc-11-8xry6z47.1/nmdc_wfrqc-11-8xry6z47.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5b50eb12ade75e8808034365f176a897 nmdc:dobj-11-15g07594 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-8xry6z47.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:0413a8d75657c3b560e9366414b0c4ff nmdc:wfrqc-11-8xry6z47.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-zaxsm356 +INFO:root:New activity id created for nmdc:omprc-11-zaxsm356 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-n9pp4b82.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfmgas-11-n9pp4b82.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b1dbcfe9f989d350e93cc5159784abf1 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfmgas-11-n9pp4b82.1/nmdc_wfmgas-11-n9pp4b82.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b1dbcfe9f989d350e93cc5159784abf1 nmdc:dobj-11-76zxnv52 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n9pp4b82.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c09583c81d172d8c0c66eb0620c6ff0b +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfmgas-11-n9pp4b82.1/nmdc_wfmgas-11-n9pp4b82.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c09583c81d172d8c0c66eb0620c6ff0b nmdc:dobj-11-sxkqmr78 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n9pp4b82.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eaaed48092071825b1c81b62eff59cb1 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfmgas-11-n9pp4b82.1/nmdc_wfmgas-11-n9pp4b82.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eaaed48092071825b1c81b62eff59cb1 nmdc:dobj-11-v222s421 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-n9pp4b82.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:03c9616ec2c6bacd4f8d145b68d8c963 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfmgas-11-n9pp4b82.1/nmdc_wfmgas-11-n9pp4b82.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:03c9616ec2c6bacd4f8d145b68d8c963 nmdc:dobj-11-mbxvea09 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nmdc:omprc-11-zaxsm356 +INFO:root:New activity id created for nmdc:omprc-11-zaxsm356 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-s08g9k77.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:574a73f61937bf4aa0e89afe6833bf39 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:574a73f61937bf4aa0e89afe6833bf39 nmdc:dobj-11-pjz4sk27 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c0cc759108fd03c082b286ee028c2926 +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c0cc759108fd03c082b286ee028c2926 nmdc:dobj-11-zj5kjd41 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3ed73cab0fc3a3bb52c485a9dd3ecc91 +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3ed73cab0fc3a3bb52c485a9dd3ecc91 nmdc:dobj-11-faf8c310 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c1afa96f0d8910a8b0f8db7a75d4b88f +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c1afa96f0d8910a8b0f8db7a75d4b88f nmdc:dobj-11-xed2cp53 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82bc6f3a4917e8faa32902fe66688858 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82bc6f3a4917e8faa32902fe66688858 nmdc:dobj-11-rt2w8m47 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5dc96d3529d375efec94ce25d188af6f +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5dc96d3529d375efec94ce25d188af6f nmdc:dobj-11-2sfpcw35 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b7b29c648599a1e7e93ab88bb7ccdfdd +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b7b29c648599a1e7e93ab88bb7ccdfdd nmdc:dobj-11-naav6x09 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:62eb2cc638f66a3d425092d332e259eb +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:62eb2cc638f66a3d425092d332e259eb nmdc:dobj-11-t9ganh82 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:a61309a8f493e148724ae61437be074c +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-zaxsm356/nmdc:wfrbt-11-s08g9k77.1/nmdc_wfrbt-11-s08g9k77.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:a61309a8f493e148724ae61437be074c nmdc:dobj-11-vkn63g35 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-zaxsm356 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-s08g9k77.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:0413a8d75657c3b560e9366414b0c4ff nmdc:wfrbt-11-s08g9k77.1 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created for nmdc:omprc-11-ht6zfn30 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-c5yebj68.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfmgas-11-c5yebj68.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:fd6c21b21063a208d19fba19be2fb54c +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfmgas-11-c5yebj68.1/nmdc_wfmgas-11-c5yebj68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:fd6c21b21063a208d19fba19be2fb54c nmdc:dobj-11-wsd4f564 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c5yebj68.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2dfcc8c80afd39e9d4edf12a1ca2c955 +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfmgas-11-c5yebj68.1/nmdc_wfmgas-11-c5yebj68.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2dfcc8c80afd39e9d4edf12a1ca2c955 nmdc:dobj-11-dxdy5t79 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-c5yebj68.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:c92cd3fe38b671c5c6def5dce8134c2f +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfmgas-11-c5yebj68.1/nmdc_wfmgas-11-c5yebj68.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:c92cd3fe38b671c5c6def5dce8134c2f nmdc:dobj-11-ddptgc02 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: 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file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfrbt-11-ss5zve75.1/nmdc_wfrbt-11-ss5zve75.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4d0788b7eeecb26b0e5a4f15d2ec460c nmdc:dobj-11-f0f41d21 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ss5zve75.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3b567185b87e59c4c4bff9de58f18f72 +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfrbt-11-ss5zve75.1/nmdc_wfrbt-11-ss5zve75.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3b567185b87e59c4c4bff9de58f18f72 nmdc:dobj-11-bz24q059 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ss5zve75.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:692f07cb67230174326ff2db9d3175d4 +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfrbt-11-ss5zve75.1/nmdc_wfrbt-11-ss5zve75.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:692f07cb67230174326ff2db9d3175d4 nmdc:dobj-11-te73qw27 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ss5zve75.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:141cf0b3528f27d6f888723548ad6473 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfrbt-11-ss5zve75.1/nmdc_wfrbt-11-ss5zve75.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:141cf0b3528f27d6f888723548ad6473 nmdc:dobj-11-05mn2k56 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ss5zve75.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:293c0f5e7dc7a0cdbe8eed1cae21d67a +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-ht6zfn30/nmdc:wfrbt-11-ss5zve75.1/nmdc_wfrbt-11-ss5zve75.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:293c0f5e7dc7a0cdbe8eed1cae21d67a nmdc:dobj-11-4q73pr35 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ss5zve75.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: 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nmdc:omprc-11-ht6zfn30 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-ss5zve75.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:42e77a8c00af42b03349a2ed4b26a3e2 nmdc:wfrbt-11-ss5zve75.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-ht6zfn30 +INFO:root:omics_processing_id: nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b881464d0b3516a5f4fca nmdc:dobj-11-ge3h3g21 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-szqrn945 +INFO:root:New activity id created for nmdc:omprc-11-szqrn945 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-h65t7y44.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrqc-11-h65t7y44.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:d0e91ab3f95dc52be37c14bf2f73b282 +INFO:root:New file path computed for 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nmdc:99b4f0437207ace27d14eeff8dfd62d9 nmdc:dobj-11-2398p335 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qhc5f171.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:21245d5b7412ef210af4b726b360cf86 +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfmgas-11-qhc5f171.1/nmdc_wfmgas-11-qhc5f171.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:21245d5b7412ef210af4b726b360cf86 nmdc:dobj-11-028qyf51 +INFO:nmdc_automation.re_iding.base:new_description: Assembled AGP file for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qhc5f171.1_assembly.agp +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f529a0a19d40a3500f8ccfa13a5b6863 +INFO:root:New file path computed for Assembly Coverage BAM: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfmgas-11-qhc5f171.1/nmdc_wfmgas-11-qhc5f171.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f529a0a19d40a3500f8ccfa13a5b6863 nmdc:dobj-11-a8va1g96 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Alignment BAM file for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-qhc5f171.1_pairedMapped_sorted.bam +INFO:nmdc_automation.re_iding.base:nmdc:MetagenomeAssembly nmdc:397d09d100dd3e38fe0a720510d8eb8b nmdc:wfmgas-11-qhc5f171.1 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-szqrn945 +INFO:root:New activity id created for nmdc:omprc-11-szqrn945 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-awhkjk74.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:285e3a2e70983994a1cd0a2ec47b7707 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:285e3a2e70983994a1cd0a2ec47b7707 nmdc:dobj-11-5774hg89 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:b9dfc0761eb0327df911f758a2583e6a +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:b9dfc0761eb0327df911f758a2583e6a nmdc:dobj-11-ptbzh977 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0718b7ea86ca78d74d41159f475380fb +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0718b7ea86ca78d74d41159f475380fb nmdc:dobj-11-j8360x38 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:ad1a29bda7d865052db0ab1c5aa2e1ba +INFO:root:New file path computed for Centrifuge Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:ad1a29bda7d865052db0ab1c5aa2e1ba nmdc:dobj-11-1wvyjx09 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge classification TSV report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_centrifuge_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82ce3584ca0df0b64c53f50876c40cba +INFO:root:New file path computed for Centrifuge Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82ce3584ca0df0b64c53f50876c40cba nmdc:dobj-11-z7d5wq09 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:0bedd840cf400d57fe64bae8e2ddd192 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:0bedd840cf400d57fe64bae8e2ddd192 nmdc:dobj-11-8ber9w39 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:f575af3569c208cb96abe4bce2378c23 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:f575af3569c208cb96abe4bce2378c23 nmdc:dobj-11-9xm7mp15 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eb6bfd132b304a71a9f852d8edd9f683 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eb6bfd132b304a71a9f852d8edd9f683 nmdc:dobj-11-rf4ngg52 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:1600304180cf40ff95c93387f77966ff +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-szqrn945/nmdc:wfrbt-11-awhkjk74.1/nmdc_wfrbt-11-awhkjk74.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:1600304180cf40ff95c93387f77966ff nmdc:dobj-11-h32fks96 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-szqrn945 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-awhkjk74.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:397d09d100dd3e38fe0a720510d8eb8b nmdc:wfrbt-11-awhkjk74.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-szqrn945 +INFO:root:omics_processing_id: nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b3b882364d0b3516a5f4fcf nmdc:dobj-11-nwn1kf84 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-tzzm8x88 +INFO:root:New activity id created for nmdc:omprc-11-tzzm8x88 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-et9tb364.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrqc-11-et9tb364.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2f44939cfa6bf4a2854e023c50984d8b +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrqc-11-et9tb364.1/nmdc_wfrqc-11-et9tb364.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2f44939cfa6bf4a2854e023c50984d8b nmdc:dobj-11-rfssra79 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Reads for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-et9tb364.1_filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:82388575727f7ce124ecbb6e94633234 +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrqc-11-et9tb364.1/nmdc_wfrqc-11-et9tb364.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:82388575727f7ce124ecbb6e94633234 nmdc:dobj-11-7rp4p464 +INFO:nmdc_automation.re_iding.base:new_description: Filtered Stats for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-et9tb364.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:68c39762175f1aff3269fcb52d09fd8d nmdc:wfrqc-11-et9tb364.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-tzzm8x88 +INFO:root:New activity id created for nmdc:omprc-11-tzzm8x88 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-cza1x407.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfmgas-11-cza1x407.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cb01b760520d0827441f93e9360a22c3 +INFO:root:New file path computed for Assembly Contigs: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfmgas-11-cza1x407.1/nmdc_wfmgas-11-cza1x407.1_contigs.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:cb01b760520d0827441f93e9360a22c3 nmdc:dobj-11-dmbc0k58 +INFO:nmdc_automation.re_iding.base:new_description: Assembled contigs fasta for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cza1x407.1_contigs.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:4ae7a63077c1a43e8937b90be03c9c1d +INFO:root:New file path computed for Assembly Scaffolds: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfmgas-11-cza1x407.1/nmdc_wfmgas-11-cza1x407.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:4ae7a63077c1a43e8937b90be03c9c1d nmdc:dobj-11-csw47d67 +INFO:nmdc_automation.re_iding.base:new_description: Assembled scaffold fasta for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cza1x407.1_scaffolds.fna +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:60a1b2a517cc840dd0c04bf5648a6e79 +INFO:root:New file path computed for Assembly Coverage Stats: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfmgas-11-cza1x407.1/nmdc_wfmgas-11-cza1x407.1_covstats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:60a1b2a517cc840dd0c04bf5648a6e79 nmdc:dobj-11-6rngjs30 +INFO:nmdc_automation.re_iding.base:new_description: Metagenome Contig Coverage Stats for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfmgas-11-cza1x407.1_covstats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:aa54def849ccdb5b442d07ecb787a70c +INFO:root:New file path computed for Assembly AGP: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfmgas-11-cza1x407.1/nmdc_wfmgas-11-cza1x407.1_assembly.agp +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:aa54def849ccdb5b442d07ecb787a70c nmdc:dobj-11-6cw45s33 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nmdc:omprc-11-tzzm8x88 +INFO:root:New activity id created for nmdc:omprc-11-tzzm8x88 activity type nmdc:ReadBasedTaxonomyAnalysisActivity: nmdc:wfrbt-11-3gc59548.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5378aac69d81a797372254933c975ad5 +INFO:root:New file path computed for GOTTCHA2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1/nmdc_wfrbt-11-3gc59548.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5378aac69d81a797372254933c975ad5 nmdc:dobj-11-tksp6m69 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 TSV report for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3gc59548.1_gottcha2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:2a59b6efe8ccae45b12ec83237f0292d +INFO:root:New file path computed for GOTTCHA2 Report Full: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1/nmdc_wfrbt-11-3gc59548.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:2a59b6efe8ccae45b12ec83237f0292d nmdc:dobj-11-exe6ny54 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 full TSV report for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3gc59548.1_gottcha2_report_full.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:3e6970fbb5d7f6689fba85d373bd425e +INFO:root:New file path computed for GOTTCHA2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1/nmdc_wfrbt-11-3gc59548.1_gottcha2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:3e6970fbb5d7f6689fba85d373bd425e nmdc:dobj-11-5hfr5823 +INFO:nmdc_automation.re_iding.base:new_description: Gottcha2 Krona HTML report for nmdc:omprc-11-tzzm8x88 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/global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1/nmdc_wfrbt-11-3gc59548.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:d5882eb0d40823ebecdad09c07216896 nmdc:dobj-11-w7w1k345 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge TSV report for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3gc59548.1_centrifuge_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:5f7711ebf9b34b25e0dba8298e0daef7 +INFO:root:New file path computed for Centrifuge Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1/nmdc_wfrbt-11-3gc59548.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:5f7711ebf9b34b25e0dba8298e0daef7 nmdc:dobj-11-pf3qzr41 +INFO:nmdc_automation.re_iding.base:new_description: Centrifuge Krona HTML report for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3gc59548.1_centrifuge_krona.html +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:840bc93374184189b81a34b3b6cdb7d3 +INFO:root:New file path computed for Kraken2 Taxonomic Classification: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1/nmdc_wfrbt-11-3gc59548.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:840bc93374184189b81a34b3b6cdb7d3 nmdc:dobj-11-qpkxgq92 +INFO:nmdc_automation.re_iding.base:new_description: Kraken classification TSV report for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3gc59548.1_kraken2_classification.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:63023feaecb62f235c2b3b47dc7d7c30 +INFO:root:New file path computed for Kraken2 Classification Report: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1/nmdc_wfrbt-11-3gc59548.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:63023feaecb62f235c2b3b47dc7d7c30 nmdc:dobj-11-2y28pj96 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 TSV report for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3gc59548.1_kraken2_report.tsv +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:e2caceed097bec36e6cae16b99b24bb0 +INFO:root:New file path computed for Kraken2 Krona Plot: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-tzzm8x88/nmdc:wfrbt-11-3gc59548.1/nmdc_wfrbt-11-3gc59548.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:e2caceed097bec36e6cae16b99b24bb0 nmdc:dobj-11-f02bmq17 +INFO:nmdc_automation.re_iding.base:new_description: Kraken2 Krona HTML report for nmdc:omprc-11-tzzm8x88 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrbt-11-3gc59548.1_kraken2_krona.html +INFO:nmdc_automation.re_iding.base:nmdc:ReadBasedTaxonomyAnalysisActivity nmdc:68c39762175f1aff3269fcb52d09fd8d nmdc:wfrbt-11-3gc59548.1 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-tzzm8x88 +INFO:root:omics_processing_id: nmdc:omprc-11-7hs0fa05 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b6f8b6a64d0b3516a61a211 nmdc:dobj-11-5sm4y916 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-7hs0fa05 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-7hs0fa05 +INFO:nmdc_automation.re_iding.base:Updating read_based_taxonomy_analysis_activity_set for nmdc:omprc-11-7hs0fa05 +INFO:nmdc_automation.re_iding.base:No metatranscriptome_activity_set found for nmdc:omprc-11-7hs0fa05 +INFO:root:omics_processing_id: nmdc:omprc-11-j3p6wr33 +INFO:nmdc_automation.re_iding.base:nmdcDataObject jgi:5b6f8b6564d0b3516a61a20f nmdc:dobj-11-x23qfg34 +INFO:nmdc_automation.re_iding.base:Updating reads_qc_analysis_activity_set for nmdc:omprc-11-j3p6wr33 +INFO:root:New activity id created for nmdc:omprc-11-j3p6wr33 activity type nmdc:ReadQcAnalysisActivity: nmdc:wfrqc-11-qcbz1j98.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j3p6wr33/nmdc:wfrqc-11-qcbz1j98.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:8f37f51bee727cf671e62ba1e9e2603e +INFO:root:New file path computed for QC Statistics: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j3p6wr33/nmdc:wfrqc-11-qcbz1j98.1/nmdc_wfrqc-11-qcbz1j98.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:8f37f51bee727cf671e62ba1e9e2603e nmdc:dobj-11-jg7m2550 +INFO:nmdc_automation.re_iding.base:new_description: Filtered read data stats for nmdc:omprc-11-j3p6wr33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qcbz1j98.1_filterStats.txt +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:eee43f1602f7eb54d87c3729f213e637 +INFO:root:New file path computed for Filtered Sequencing Reads: /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j3p6wr33/nmdc:wfrqc-11-qcbz1j98.1/nmdc_wfrqc-11-qcbz1j98.1_190751.filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdcDataObject nmdc:eee43f1602f7eb54d87c3729f213e637 nmdc:dobj-11-kv0qmt16 +INFO:nmdc_automation.re_iding.base:new_description: Filtered read data for nmdc:omprc-11-j3p6wr33 +INFO:nmdc_automation.re_iding.base:new_filename: nmdc_wfrqc-11-qcbz1j98.1_190751.filtered.fastq.gz +INFO:nmdc_automation.re_iding.base:nmdc:ReadQcAnalysisActivity nmdc:d570f783c6449edab660111fc965f3d1 nmdc:wfrqc-11-qcbz1j98.1 +INFO:nmdc_automation.re_iding.base:Updating metagenome_assembly_set for nmdc:omprc-11-j3p6wr33 +INFO:root:New activity id created for nmdc:omprc-11-j3p6wr33 activity type nmdc:MetagenomeAssembly: nmdc:wfmgas-11-z79mnt63.1 +INFO:root:Skipping directory creation for /global/cfs/cdirs/m3408/results/nmdc:omprc-11-j3p6wr33/nmdc:wfmgas-11-z79mnt63.1 +INFO:nmdc_automation.re_iding.base:old_do_id: nmdc:cf2bbb596ae0e5e3e906e787a0c60253 +WARNING:nmdc_automation.re_iding.base:Data object url not found for nmdc:cf2bbb596ae0e5e3e906e787a0c60253 - Metagenome Contig Coverage Stats for gold:Gp0324007 +WARNING:nmdc_automation.re_iding.base:Using inferred url: https://data.microbiomedata.org/data/nmdc:omprc-11-j3p6wr33/assembly/mapping_stats.txt +Traceback (most recent call last): + File "/Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/./re_id_tool.py", line 678, in + cli(obj={}) + File "/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/click/core.py", line 1157, in __call__ + return self.main(*args, **kwargs) + File "/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/click/core.py", line 1078, in main + rv = self.invoke(ctx) + File "/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/click/core.py", line 1688, in invoke + return _process_result(sub_ctx.command.invoke(sub_ctx)) + File "/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/click/core.py", line 1434, in invoke + return ctx.invoke(self.callback, **ctx.params) + File "/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/click/core.py", line 783, in invoke + return __callback(*args, **kwargs) + File "/Users/MBThornton/Library/Caches/pypoetry/virtualenvs/nmdc-automation-VEpwcKpc-py3.9/lib/python3.9/site-packages/click/decorators.py", line 33, in new_func + return f(get_current_context(), *args, **kwargs) + File "/Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/scripts/./re_id_tool.py", line 359, in process_records + new_db = reid_tool.update_metagenome_assembly_set(db_record, new_db, update_links) + File "/Users/MBThornton/Documents/code/nmdc_automation/nmdc_automation/re_iding/base.py", line 256, in update_metagenome_assembly_set + new_file_path = compute_new_data_file_path(old_do_rec["url"], new_assembly_base_dir, new_activity_id) +KeyError: 'url'