64 update re id tool.py to not rely on the changesheets submit endpoint#65

Merged

Michal-Babins merged 14 commits intomainfrom 64-update-re_id_toolpy-to-not-rely-on-the-changesheetssubmit-endpoint

Feb 23, 2024

+78,282-25,451

Commits on Feb 15, 2024

switch back to using pymongo
mbthornton-lbl
committed

Commits on Feb 20, 2024

use PyMongo as a workaround
mbthornton-lbl
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Commits on Feb 22, 2024

Commits on Feb 23, 2024

add nmdc:sty-11-076c9980_delete_old_records2.log
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update delete-old-records to do batch delete by set_name
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finish delete-old-records for nmdc:sty-11-076c9980
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Merge branch '58-refactor-re_id_tools-ingest-records-to-not-use-deprecated-v1workflowsactivities-endpoint' into 64-update-re_id_toolpy-to-not-rely-on-the-changesheetssubmit-endpoint
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update to handle data objects with missing file_size_bytes or md5_checksum
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update to fail data objects that cannot be typed and remove reliance on changesheets
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delete obsolete changesheet data
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log files for ingest / delete EMP study
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data and logfiles for nmdc:sty-11-dcqce727
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remove credentials
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