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Add support for base and target trees in git ingest, add .tar.gz bund…
…ler (#5181) * Add support for base and target trees in git ingest, add .tar.gz bundler * Fix line-too-long lint error * Rename 'bundle' to 'archive' per feedback from Ed * Clean up some extra logging, add more details on PR evaluation * Flag-protect new functionality * Update new tests for changes to Eval method * Fix lint /tableflip
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