From 86fe361ffcc24c532ff5deef5623b6d4080013ce Mon Sep 17 00:00:00 2001
From: Eric Larson <larson.eric.d@gmail.com>
Date: Tue, 27 Aug 2024 08:28:40 +1000
Subject: [PATCH] WIP: Fix dockerfile

---
 base/Dockerfile | 24 +++++++++++++-----------
 1 file changed, 13 insertions(+), 11 deletions(-)

diff --git a/base/Dockerfile b/base/Dockerfile
index 08b7b8b..72578e3 100644
--- a/base/Dockerfile
+++ b/base/Dockerfile
@@ -1,6 +1,6 @@
-FROM ubuntu:20.04
+FROM ubuntu:24.04
 
-ARG mne_v=v0.23.0
+ARG mne_v=v1.8.0
 
 ENV DEBIAN_FRONTEND=noninteractive
 
@@ -39,15 +39,21 @@ SHELL ["/bin/bash", "--login", "-c"]
 
 RUN conda install --yes \
     -c conda-forge \
-    python==3.9 \
+    python==3.12 \
     python-blosc \
     cytoolz \
-    dask==2021.4.0 \
+    dask \
     lz4 \
     nomkl \
-    numpy==1.21.0 \
-    pandas==1.3.0 \
-    tini==0.18.0 \
+    numpy \
+    pandas \
+    tini \
+    pooch \
+    bokeh \
+    joblib \
+    nibabel \
+    h5py \
+    s3fs \
     && conda clean -tipy \
     && find /opt/conda/ -type f,l -name '*.a' -delete \
     && find /opt/conda/ -type f,l -name '*.pyc' -delete \
@@ -55,10 +61,6 @@ RUN conda install --yes \
     && find /opt/conda/lib/python*/site-packages/bokeh/server/static -type f,l -name '*.js' -not -name '*.min.js' -delete \
     && rm -rf /opt/conda/pkgs
 
-RUN pip install s3fs
-RUN pip install bokeh
-RUN pip install nibabel joblib h5py
-RUN pip install pooch
 RUN pip install https://github.com/mne-tools/mne-python/archive/${mne_v}.zip
 
 ENTRYPOINT ["tini", "-g", "--", "/usr/bin/prepare.sh"]