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Failing check in predict_position() #38

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moi-taiga opened this issue Sep 10, 2024 · 0 comments
Open

Failing check in predict_position() #38

moi-taiga opened this issue Sep 10, 2024 · 0 comments
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enhancement New feature or request

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@moi-taiga
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The check for whether subset_switching_genes() has been run, doesn't work if the sample is smaller.
Need a different method for checking if subset_switching_genes() has been run.

Error in predict_position(p16_sce, switching_genes) :
The number of genes in the reduced binary counts matrix is
greater than the number of switching genes.

Make sure you have run PathPinpointR::subset_switching_genes()
@moi-taiga moi-taiga added the enhancement New feature or request label Sep 10, 2024
@moi-taiga moi-taiga self-assigned this Sep 10, 2024
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