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ce11.yaml
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name: foo
has:
CHR:6239-chrI:
id: CHR:6239-chrI
band_descriptor: ''
chromosome_name: chrI
build: ce11
name: chromosome I (C elegans)
type:
text: chromosome
meaning: http://purl.obolibrary.org/obo/GO_0005694
somal_type:
text: autosome
meaning: http://purl.obolibrary.org/obo/GO_0030849
cell_location:
text: nucleus
meaning: http://purl.obolibrary.org/obo/GO_0005634
taxon: NCBITaxon:6239
start: 0
end: 15072434
exact_mappings:
- refseq:NC_003279.8
broad_synonyms:
- I
CHR:6239-chrII:
id: CHR:6239-chrII
band_descriptor: ''
chromosome_name: chrII
build: ce11
name: chromosome II (C elegans)
type:
text: chromosome
meaning: http://purl.obolibrary.org/obo/GO_0005694
somal_type:
text: autosome
meaning: http://purl.obolibrary.org/obo/GO_0030849
cell_location:
text: nucleus
meaning: http://purl.obolibrary.org/obo/GO_0005634
taxon: NCBITaxon:6239
start: 0
end: 15279421
exact_mappings:
- refseq:NC_003280.10
broad_synonyms:
- II
CHR:6239-chrIII:
id: CHR:6239-chrIII
band_descriptor: ''
chromosome_name: chrIII
build: ce11
name: chromosome III (C elegans)
type:
text: chromosome
meaning: http://purl.obolibrary.org/obo/GO_0005694
somal_type:
text: autosome
meaning: http://purl.obolibrary.org/obo/GO_0030849
cell_location:
text: nucleus
meaning: http://purl.obolibrary.org/obo/GO_0005634
taxon: NCBITaxon:6239
start: 0
end: 13783801
exact_mappings:
- refseq:NC_003281.10
broad_synonyms:
- III
CHR:6239-chrIV:
id: CHR:6239-chrIV
band_descriptor: ''
chromosome_name: chrIV
build: ce11
name: chromosome IV (C elegans)
type:
text: chromosome
meaning: http://purl.obolibrary.org/obo/GO_0005694
somal_type:
text: autosome
meaning: http://purl.obolibrary.org/obo/GO_0030849
cell_location:
text: nucleus
meaning: http://purl.obolibrary.org/obo/GO_0005634
taxon: NCBITaxon:6239
start: 0
end: 17493829
exact_mappings:
- refseq:NC_003282.8
broad_synonyms:
- IV
CHR:6239-chrM:
id: CHR:6239-chrM
band_descriptor: ''
chromosome_name: chrM
build: ce11
name: chromosome M (C elegans)
type:
text: chromosome
meaning: http://purl.obolibrary.org/obo/GO_0005694
cell_location:
text: mitochondrion
meaning: http://purl.obolibrary.org/obo/GO_0005739
taxon: NCBITaxon:6239
start: 0
end: 13794
exact_mappings:
- refseq:NC_001328.1
broad_synonyms:
- MtDNA
CHR:6239-chrV:
id: CHR:6239-chrV
band_descriptor: ''
chromosome_name: chrV
build: ce11
name: chromosome V (C elegans)
type:
text: chromosome
meaning: http://purl.obolibrary.org/obo/GO_0005694
somal_type:
text: autosome
meaning: http://purl.obolibrary.org/obo/GO_0030849
cell_location:
text: nucleus
meaning: http://purl.obolibrary.org/obo/GO_0005634
taxon: NCBITaxon:6239
start: 0
end: 20924180
exact_mappings:
- refseq:NC_003283.11
broad_synonyms:
- V
CHR:6239-chrX:
id: CHR:6239-chrX
band_descriptor: ''
chromosome_name: chrX
build: ce11
name: chromosome X (C elegans)
type:
text: chromosome
meaning: http://purl.obolibrary.org/obo/GO_0005694
somal_type:
text: sex_chromosome
meaning: http://purl.obolibrary.org/obo/GO_0000803
sex_chromosome_type:
text: X
meaning: http://purl.obolibrary.org/obo/GO_0000805
cell_location:
text: nucleus
meaning: http://purl.obolibrary.org/obo/GO_0005634
taxon: NCBITaxon:6239
start: 0
end: 17718942
exact_mappings:
- refseq:NC_003284.9
broad_synonyms:
- X
genomes:
mm:
id: mm
name: Mouse
taxon: NCBITaxon:10090
hg:
id: hg
name: Human
taxon: NCBITaxon:9606
dm:
id: dm
name: Drosophila melanogaster
taxon: NCBITaxon:7227
danRer:
id: danRer
name: Danio rerio
taxon: NCBITaxon:7955
rn:
id: rn
name: Rat
taxon: NCBITaxon:10116
ce:
id: ce
name: C elegans
taxon: NCBITaxon:6239
build: ce11
galGal:
id: galGal
name: Chicken
taxon: NCBITaxon:9031
taxons:
NCBITaxon:10090:
id: NCBITaxon:10090
name: Mus musculus
NCBITaxon:9606:
id: NCBITaxon:9606
name: Homo sapiens
NCBITaxon:7227:
id: NCBITaxon:7227
name: Drosophila melanogaster
NCBITaxon:7955:
id: NCBITaxon:7955
name: Danio rerio
NCBITaxon:10116:
id: NCBITaxon:10116
name: Rattus norvegicus
NCBITaxon:6239:
id: NCBITaxon:6239
name: Caenorhabditis elegans