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prompt: |+ Split the following piece of text into fields in the following format: phenotypes: <A semicolon-separated list of human phenotypes, including symptoms of disease. It must be semicolon-separated. Labels containing the word 'with' should be split into multiple phenotypes.> label: <The label (name) of the named thing> Text: the patient had a middle ear infection ===extracted_object:
id: 53239082-f074-4ca5-9eeb-49dd2095de35label: patientphenotypes:
- HP:0000388named_entities:
- id: HP:0000388label: middle ear infection
In this case, the label shown is from the input text, but the HP label for HP:0000388 is Otitis media.
The results should show which labels are from synonyms (as in this case) or are exact matches.
Extractions currently show results like so:
In this case, the
label
shown is from the input text, but the HP label forHP:0000388
isOtitis media
.The results should show which labels are from synonyms (as in this case) or are exact matches.
per convo with @twhetzel
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