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Merge pull request #206 from monarch-initiative/241105
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VBO November release
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@katiermullen
katiermullen authored Nov 6, 2024
2 parents f2f3687 + da8da39 commit 75007a7
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2 changes: 1 addition & 1 deletion src/ontology/components/catbreeds.tsv
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vbo_id term_label to_be_ignored breed_name_to_be_used_for_label species_to_be_used_for_label internal_term_merge_indicator_vboid_into_vboid internal_date_and_issue_separated_by_pipe_yymmdd_dash_issue gh_issue_NOT_merge_obsolete parent_ID source_for_parents source_for_parents parent_ID source_for_parents source_for_parents most_common_name synonym_type_most_common_name source_for_most_common_name source_for_most_common_name synonym_dadis_name_not_used_in_label source_for_synonym_dadis source_for_synonym_dadis synonym_1 source_for_synonym_1 source_for_synonym_1 synonym_2 source_for_synonym_2 source_for_synonym_2 synonym_3 source_for_synonym_3 source_for_synonym_3 synonym_4 source_for_synonym_4 source_for_synonym_4 synonym_related_1 source_for_synonym_1 synonym_related_2 source_for_synonym_2 synonym_related_3 source_for_synonym_3 synonym_label_from_merged_term source_for_merged_term Breed_code_1 all_source_for_breed_code_1_separated_by_pipe all_source_for_breed_code_1_separated_by_pipe Breed_code_2 all_source_for_breed_code_2_separated_by_pipe all_source_for_breed_code_2_separated_by_pipe Breed_code_3 all_source_for_breed_code_3_separated_by_pipe all_source_for_breed_code_3_separated_by_pipe Breed_code_4 all_source_for_breed_code_4_separated_by_pipe all_source_for_breed_code_4_separated_by_pipe definition definition_xref definition_xref xref1 source_for_xref1 source_for_xref1 xref2 source_for_xref2 source_for_xref2 omia_xref_internal recognition_status_1 source_for_recognition_status_1 source_for_recognition_status_1 recognition_status_2 source_for_recognition_status_2 source_for_recognition_status_2 recognition_status_3 source_for_recognition_status_3 source_for_recognition_status_3 source_for_breed_CFA source_for_breed_FIFe source_for_breed_GCCF source_for_breed_OMIA source_for_breed_REFR source_for_breed_TICA source_for_breed_WCC source_for_breed_WCF source_for_breed_WIKI source_for_breed_OTHER source_for_breed contributors contributors comment general_comment comment_from_obsoletion description_of_origin source_for_description_of_origin source_for_description_of_origin domestication_status source_for_domestication_status wikidata_link_for_the_country_exists_in_country_subclass source_for_country_subclass source_for_country_subclass obsoletion_type obsolete replacement_term consider replacement_label comment GH_issue obsolescence_reason curator_note foundation_stock_label_1 foundation_stock_relation_1 source_1_has_foundation_stock source_1_has_foundation_stock foundation_stock_label_2 foundation_stock_relation_2 source_2_has_foundation_stock source_2_has_foundation_stock foundation_stock_label_3 foundation_stock_relation_3 source_3_has_foundation_stock source_3_has_foundation_stock foundation_stock_label_4 foundation_stock_relation_4 source_4_has_foundation_stock source_4_has_foundation_stock foundation_stock_relation_5 foundation_stock_label_5 source_5_has_foundation_stock source_5_has_foundation_stock foundation_stock_label_6 foundation_stock_relation_6 source_6_has_foundation_stock source_6_has_foundation_stock
ID LABEL AT IAO:0000233^^xsd:anyURI SPLIT=| SC % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AI oboInOwl:hasSynonymType >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasExactSynonym >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A IAO:0000115 >AT oboInOwl:hasDbXref^^xsd:anyURI SPLIT=| >A oboInOwl:hasDbXref SPLIT=| A oboInOwl:hasDbXref SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasDbXref SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI A dc:source SPLIT=| AI dc:contributor SPLIT=| AI dc:contributor SPLIT=| A rdfs:comment A http://purl.obolibrary.org/obo/vbo#origindescription >AT oboInOwl:source^^xsd:anyURI >A oboInOwl:source AI http://purl.obolibrary.org/obo/vbo#hasdomesticationstatus >AT oboInOwl:source^^xsd:anyURI SC 'located in' value % >AT oboInOwl:source^^xsd:anyURI >A oboInOwl:source TYPE AT owl:deprecated^^xsd:boolean AI IAO:0100001 AI http://www.geneontology.org/formats/oboInOwl#consider AT IAO:0000233^^xsd:anyURI A IAO:0000231 SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has_foundation_stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=|
ID LABEL AT IAO:0000233^^xsd:anyURI SPLIT=| SC % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AI oboInOwl:hasSynonymType >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasExactSynonym >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasRelatedSynonym SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| A oboInOwl:hasExactSynonym >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A http://purl.obolibrary.org/obo/vbo#breed_code >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A IAO:0000115 >AT oboInOwl:hasDbXref^^xsd:anyURI SPLIT=| >A oboInOwl:hasDbXref SPLIT=| A oboInOwl:hasDbXref SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| A oboInOwl:hasDbXref SPLIT=| >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AI http://purl.obolibrary.org/obo/vbo#breed_recognition_status >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI AT dc:source^^xsd:anyURI A dc:source SPLIT=| AI dc:contributor SPLIT=| AI dc:contributor SPLIT=| A rdfs:comment A http://purl.obolibrary.org/obo/vbo#origindescription >AT oboInOwl:source^^xsd:anyURI >A oboInOwl:source AI http://purl.obolibrary.org/obo/vbo#hasdomesticationstatus >AT oboInOwl:source^^xsd:anyURI SC 'located in' value % >AT oboInOwl:source^^xsd:anyURI >A oboInOwl:source TYPE AT owl:deprecated^^xsd:boolean AI IAO:0100001 AI http://www.geneontology.org/formats/oboInOwl#consider AT IAO:0000233^^xsd:anyURI A IAO:0000231 SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=| SC 'has foundation stock' some % >AT oboInOwl:source^^xsd:anyURI SPLIT=| >A oboInOwl:source SPLIT=|
VBO:0100120 obsolete Household Pet (Cat) Household Pet Cat 240828-65 https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153 Household Pet http://purl.obolibrary.org/obo/vbo#most_common_name https://www.tica.org/breeds/browse-all-breeds|https://cfa.org/showing-a-household-pet/ HH https://www.tica.org/phocadownload/hh.pdf VBO:0300004 https://www.tica.org/breeds/browse-all-breeds https://cfa.org/showing-a-household-pet/ https://www.tica.org/breeds/browse-all-breeds https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153|https://orcid.org/0000-0002-5520-6597|https://orcid.org/0000-0002-9178-3965 Out of scope. Consider VBO:0100262 'Mixed Breed (Cat)' owl:Class true VBO:0100262 https://github.com/monarch-initiative/vertebrate-breed-ontology/issues/65 OMO:0001000
VBO:0100121 obsolete Household Pet Kitten (Cat) Household Pet Kitten Cat 240828-65 https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153 Household Pet Kitten http://purl.obolibrary.org/obo/vbo#most_common_name https://www.tica.org/breeds/browse-all-breeds HH https://www.tica.org/phocadownload/hh.pdf VBO:0300004 https://www.tica.org/breeds/browse-all-breeds https://www.tica.org/breeds/browse-all-breeds https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153|https://orcid.org/0000-0002-5520-6597|https://orcid.org/0000-0002-9178-3965 Out of scope. Consider VBO:0100262 'Mixed Breed (Cat)' owl:Class true VBO:0100262 https://github.com/monarch-initiative/vertebrate-breed-ontology/issues/65 OMO:0001000
VBO:0100122 obsolete Household Pet Longhair (Cat) Household Pet Longhair Cat 240828-65 https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153 Household Pet Longhair http://purl.obolibrary.org/obo/vbo#most_common_name https://wcf.de/en/wcf-ems-code/ HPL https://wcf.de/en/wcf-ems-code/ VBO:0300004 https://wcf.de/en/wcf-ems-code/ https://wcf.de/en/wcf-ems-code/ https://orcid.org/0000-0002-1628-7726 https://orcid.org/0000-0002-5002-8648|https://orcid.org/0000-0002-4142-7153|https://orcid.org/0000-0002-5520-6597|https://orcid.org/0000-0002-9178-3965 Out of scope. Consider VBO:0100118 'Domestic Longhair (Cat)' owl:Class true VBO:0100118 https://github.com/monarch-initiative/vertebrate-breed-ontology/issues/65 OMO:0001000
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