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add frequencies again
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@rdmorin
rdmorin committed Apr 17, 2024
1 parent cb689aa commit b83fcc2
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion resources/curated/bl_genes.tsv
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Gene earliest_support_BL Curated_BL_driver Enrichment_DLBCL_BL frequency_BL_Thomas frequency_BL_Panea n_BL_Panea_original frequency_BL_Panea_original CIViC aSHM_target_DLBCL freq Curator_comments
Gene earliest_support_BL Curated_BL_driver Enrichment_DLBCL_BL frequency_BL_Thomas frequency_BL_Panea n_BL_Panea_original frequency_BL_Panea_original CIViC
aSHM_target_DLBCL freq_all_GAMBL Curator_comments
ALPK2 31558468 FALSE NA 5.1 9.9 5 5 FALSE FALSE 3.9260969976905313 Low frequency of coding mutations in all cohorts including initial study after reanalysis of raw data. Mutations in this gene reported by Panea et al were not well supported by the data in that study.
ARID1A 23143597 TRUE BL 36 19.8 24 23.8 TRUE FALSE 28.637413394919168 Mutated at high frequency in both DLBCL and BL
B2M NA FALSE DLBCL 2.5 3 NA NA FALSE FALSE 2.3094688221709005 DLBCL gene with extremely low mutation rate in BL
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