update comments

morinlab · Apr 18, 2024 · bb4cd80 · bb4cd80
1 parent 4f21ca2
commit bb4cd80
Showing 1 changed file with 19 additions and 19 deletions.
diff --git a/resources/curated/fl_genes.tsv b/resources/curated/fl_genes.tsv
@@ -10,16 +10,16 @@ BCL2	TRUE	TRUE	TRUE	FALSE	TRUE	TRUE
 BCL6	FALSE	FALSE	FALSE	FALSE	TRUE	TRUE	37084389	aSHM
 BCL7A	FALSE	TRUE	TRUE	TRUE	TRUE	TRUE		aSHM
 BIRC6	TRUE	FALSE	FALSE	FALSE	FALSE	TRUE		
-BTG1	TRUE	TRUE	TRUE	FALSE	FALSE	TRUE		
-BTG2	TRUE	TRUE	FALSE	FALSE	TRUE	TRUE		
+BTG1	TRUE	TRUE	TRUE	FALSE	FALSE	TRUE		aSHM
+BTG2	TRUE	TRUE	FALSE	FALSE	TRUE	TRUE		aSHM
 BTK	FALSE	FALSE	TRUE	FALSE	FALSE	TRUE		
 CILP	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	
 CYP2A6	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	
 CARD11	FALSE	FALSE	TRUE	FALSE	TRUE	TRUE		
 CCND3	TRUE	FALSE	FALSE	FALSE	TRUE	TRUE		
 CD70	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	
 CD79B	TRUE	FALSE	FALSE	FALSE	TRUE	FALSE		
-CD83	TRUE	TRUE	FALSE	FALSE	FALSE	TRUE	37493986	
+CD83	TRUE	TRUE	FALSE	FALSE	FALSE	TRUE	37493986	aSHM
 CREBBP	TRUE	TRUE	TRUE	TRUE	TRUE	TRUE		
 CTSS	FALSE	FALSE	TRUE	FALSE	FALSE	TRUE		
 DDX3X	TRUE	FALSE	FALSE	FALSE	FALSE	FALSE	37084389	
@@ -34,27 +34,27 @@ GRM6	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986
 GBP7	FALSE	FALSE	FALSE	TRUE	FALSE	FALSE	37563306	
 GNA13	TRUE	FALSE	TRUE	FALSE	TRUE	TRUE		
 GNAI2	FALSE	FALSE	FALSE	FALSE	FALSE	TRUE		
-HIST1H1B	TRUE	TRUE	FALSE	FALSE	FALSE	TRUE		
-HIST1H1C	TRUE	TRUE	TRUE	FALSE	FALSE	TRUE		
-HIST1H1D	FALSE	TRUE	FALSE	FALSE	TRUE	TRUE		
-HIST1H1E	TRUE	TRUE	TRUE	FALSE	TRUE	TRUE		
-HIST1H2AC	FALSE	TRUE	FALSE	FALSE	TRUE	TRUE		
-HIST1H2AG	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		
-HIST1H2AM	FALSE	TRUE	FALSE	FALSE	TRUE	TRUE		
-HIST1H2BC	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		
-HIST1H2BD	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		
-HIST1H2BG	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		
-HIST1H2BM	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	
-HIST1H3B	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		
-HIST1H3I	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	
-HIST1H3G	FALSE	TRUE	FALSE	FALSE	TRUE	TRUE		
+HIST1H1B	TRUE	TRUE	FALSE	FALSE	FALSE	TRUE		aSHM
+HIST1H1C	TRUE	TRUE	TRUE	FALSE	FALSE	TRUE		aSHM
+HIST1H1D	FALSE	TRUE	FALSE	FALSE	TRUE	TRUE		aSHM
+HIST1H1E	TRUE	TRUE	TRUE	FALSE	TRUE	TRUE		aSHM
+HIST1H2AC	FALSE	TRUE	FALSE	FALSE	TRUE	TRUE		aSHM
+HIST1H2AG	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		aSHM
+HIST1H2AM	FALSE	TRUE	FALSE	FALSE	TRUE	TRUE		aSHM
+HIST1H2BC	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		aSHM
+HIST1H2BD	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		aSHM
+HIST1H2BG	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		aSHM
+HIST1H2BM	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	aSHM
+HIST1H3B	FALSE	TRUE	FALSE	FALSE	FALSE	TRUE		aSHM
+HIST1H3I	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	aSHM
+HIST1H3G	FALSE	TRUE	FALSE	FALSE	TRUE	TRUE		aSHM
 HLA-B	TRUE	FALSE	FALSE	FALSE	FALSE	FALSE		
 HVCN1	FALSE	FALSE	TRUE	FALSE	FALSE	TRUE		
 HNRNPD	TRUE	FALSE	FALSE	FALSE	FALSE	FALSE		
 ID3	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	
-IGLL5	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	
+IGLL5	FALSE	FALSE	FALSE	FALSE	TRUE	FALSE	37493986	aSHM/SHM. Unclear if this should be considered a gene
 IRF4	FALSE	FALSE	FALSE	FALSE	FALSE	TRUE		LBCL-IRF4
-IRF8	FALSE	TRUE	TRUE	TRUE	FALSE	TRUE		
+IRF8	FALSE	TRUE	TRUE	TRUE	FALSE	TRUE		aSHM
 ITPKB	TRUE	FALSE	FALSE	FALSE	FALSE	TRUE		
 KIR3DL1	FALSE	FALSE	FALSE	TRUE	FALSE	FALSE	37563306	
 KLF2	TRUE	FALSE	FALSE	FALSE	FALSE	TRUE