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HIST1H1C

gbanco4 edited this page Dec 19, 2024 · 29 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

[[TOC]]

Overview

This is one of several genes that encode linker histone proteins that are recurrently mutated in DLBCL and FL.[@morinFrequentMutationHistonemodifying2011; @crouchMolecularSubclustersFollicular2022] Mutations are often found in the globular domain of the protein, which is critical for its interaction with DNA and other histone proteins.

Relevance tier by entity

Entity Tier Description
PMBL 1 high-confidence PMBL/cHL/GZL gene
DLBCL 1 high-confidence DLBCL gene [@morinFrequentMutationHistonemodifying2011]
FL 1 high-confidence FL gene [@morinFrequentMutationHistonemodifying2011]
BL 3 Retired, Failed QC[@paneaWholeGenomeLandscape2019]]

Warnings

<<Warn("The variants reported in BL in this gene failed QC")>>

See below or the study page for more information

Mutation incidence in large patient cohorts (GAMBL reanalysis)

DLBCL

include:DLBCL_HIST1H1C.md

BL

include:BL_HIST1H1C.md

FL

include:FL_HIST1H1C.md

Mutation pattern and selective pressure estimates

include:dnds_HIST1H1C.md

include:browser_HIST1H1C.md

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