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rdmorin edited this page May 27, 2024 · 26 revisions

NCOR2

Overview

Mutations in this gene are relatively rare in DLBCL overall but show a pattern of inactivation. Without further support, this gene may be migrated to Tier 2.

Relevance tier by entity

Entity Tier Description
PMBL 2 relevance in PMBL/cHL/GZL not firmly established
MZL 1 high-confidence MZL gene
BL 2 relevance in BL not firmly established
DLBCL 1 high-confidence DLBCL gene

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
BL GAMBL genomes+capture 6.24
BL Thomas cohort NA
BL Panea cohort NA
DLBCL GAMBL genomes 2.10
DLBCL Schmitz cohort 5.74
DLBCL Reddy cohort 3.60
DLBCL Chapuy cohort 4.27

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 0.551 0.000
DLBCL No No 1.376 4.613
FL No No 0.985 0.000

Note

First described in BL in 2022 by Burkhardt B

NCOR2 Hotspots

Chromosome Coordinate (hg19) ref>alt HGVSp

View coding variants in ProteinPaint hg19 or hg38

image

View all variants in GenomePaint hg19 or hg38

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NCOR2 Expression

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