PTPRK
<<Warn("The variants reported in this gene in DLBCL failed QC")>>
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timeline
title Publication timing
2017-10-10 : Reddy : DLBCL
| Entity | Tier | Description |
|---|---|---|
 |
2-F | failed QC |
| Entity | source | frequency (%) |
|---|---|---|
| DLBCL | GAMBL genomes | 4.21 |
| DLBCL | Schmitz cohort | 3.62 |
| DLBCL | Reddy cohort | 3.30 |
| DLBCL | Chapuy cohort | 6.41 |
| Entity | aSHM | Significant selection | dN/dS (missense) | dN/dS (nonsense) |
|---|---|---|---|---|
| BL | No | No | 2.146 | 0.000 |
| DLBCL | No | No | 1.555 | 1.797 |
| FL | No | No | 1.875 | 5.021 |
View coding variants in ProteinPaint hg19 or hg38
View all variants in GenomePaint hg19 or hg38
Reddy_2095T Reddy_2135T Reddy_2215T Reddy_2234T Reddy_2261T Reddy_2293T Reddy_2469T Reddy_2567T Reddy_2657T Reddy_2664T Reddy_2764T Reddy_2826T Reddy_2838T Reddy_2956T Reddy_3470T Reddy_3525T Reddy_3620T Reddy_3629T Reddy_3637T Reddy_3682T Reddy_3689T Reddy_3698T Reddy_3756T Reddy_3757T Reddy_3759T Reddy_3780T Reddy_3872T Reddy_3893T Reddy_3911T Reddy_3937T Reddy_823T
- Reddy A, Zhang J, Davis NS, Moffitt AB, Love CL, Waldrop A, Leppa S, Pasanen A, Meriranta L, Karjalainen-Lindsberg ML, Nørgaard P, Pedersen M, Gang AO, Høgdall E, Heavican TB, Lone W, Iqbal J, Qin Q, Li G, Kim SY, Healy J, Richards KL, Fedoriw Y, Bernal-Mizrachi L, Koff JL, Staton AD, Flowers CR, Paltiel O, Goldschmidt N, Calaminici M, Clear A, Gribben J, Nguyen E, Czader MB, Ondrejka SL, Collie A, Hsi ED, Tse E, Au-Yeung RKH, Kwong YL, Srivastava G, Choi WWL, Evens AM, Pilichowska M, Sengar M, Reddy N, Li S, Chadburn A, Gordon LI, Jaffe ES, Levy S, Rempel R, Tzeng T, Happ LE, Dave T, Rajagopalan D, Datta J, Dunson DB, Dave SS. Genetic and Functional Drivers of Diffuse Large B Cell Lymphoma. Cell. 2017 Oct;171(2):481-494.e15.
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