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Ryan Morin edited this page Jan 7, 2025 · 42 revisions

title: 'Studies' bibliography: 'morinlab.bib'

Year Entity Method Paired samples Unpaired samples Cell lines Example gene Study
1992 DLBCL Sanger 0 5 0 BCL2 @tanakaFrequentIncidenceSomatic1992
1992 BL Sanger 0 0 9 MYC @johnstonCmycHypermutationBurkitt1992
2001 DLBCL Sanger 11 28 0 MYC @pasqualucciHypermutationMultipleProtooncogenes2001
2004 BL Sanger 0 24 0 TP53 @wildaInactivationARFMDM2p53Pathway2004
2006 DLBCL Sanger 134 0 20 PRDM1 @pasqualucciInactivationPRDM1BLIMP12006
2006 PMBL Sanger GPR126 @wenigerMutationsTumorSuppressor2006
2007 DLBCL Sanger FAS @schollMutationsRegionFAS2007
2008 DLBCL Sanger 6 217 21 CARD11 @lenzOncogenicCARD11Mutations2008
2009 DLBCL Sanger 1 1 (100.0) NFKBIA @lakeMutationsNFKBIAEncoding2009
2009 DLBCL Sanger 0 101 TNFAIP3 @compagnoMutationsMultipleGenes2009
2009 PMBL Sanger STAT6 @ritzRecurrentMutationsSTAT62009
2009 PMBL Sanger TNFAIP3 @schmitzTNFAIP3A20Tumor2009
2010 FL Sanger 11 251 0 TNFRSF14 @cheungAcquiredTNFRSF14Mutations2010
2010 DLBCL/FL RNA-seq/WGS 1 31 7 EZH2 @morinSomaticMutationsAltering2010
2011 DLBCL Sanger 0 382 20 MYD88 @ngoOncogenicallyActiveMYD882011
2011 DLBCL RNA-seq/WGS 29 27 (93.1) B2M @morinFrequentMutationHistonemodifying2011
2011 DLBCL exome 7 3 (42.9) CD36 @pasqualucciAnalysisCodingGenome2011

|2011|FL|exome|2|2 (100.0)||CREBBP|@pasqualucciInactivatingMutationsAcetyltransferase2011| |2011|DLBCL|exome/Sanger|1||1 (100.0)|BRAF|@tiacciBRAFMutationsHairycell2011| |2011|MZL|Sanger|5|4 (80.0)||BIRC3|@rossiAlterationBIRC3Multiple2011| |2012|MZL|exome|21|10 (47.6)||ARID1A|@rossiCodingGenomeSplenic2012| |2012|BL|RNA-seq/WGS/exome|5||5 (100.0)|CCND3|@richterRecurrentMutationID32012| |2012|DLBCL|Sanger|1||0 (0.0)|MIR142|@kwanhianMicroRNA142Mutated202012| |2012|DLBCL|WGS|1|1| (100.0)|CXCR4|@khodabakhshiRecurrentTargetsAberrant2012| |2012|PMBL|Array/Sanger|2|2| (100.0)|MAP3K14|@ottoGeneticLesionsTRAF32012| |2012|DLBCL|exome|39|18| (46.2)|ACTB|@lohrDiscoveryPrioritizationSomatic2012| |2012|MZL|Panel|2|2| (100.0)|CARD11|@yanBCRTLRSignaling2012| |2012|BL|exome|60|3 |(5.0)|ACAD9|@loveGeneticLandscapeMutations2012| |2012|BL|RNA-seq|20|4| (20.0)|C16orf48|@schmitzBurkittLymphomaPathogenesis2012| |2012|MZL|Array/Sanger|1|1| (100.0)|ATM|@braggioGenomicAnalysisMarginal2012| |2013|MCL|WGS/exome|27|11| (40.7)|ABCA3|@beaLandscapeSomaticMutations2013| |2013|DLBCL|exome|16|8| (50.0)|ARID1A|@zhangGeneticHeterogeneityDiffuse2013| |2013|DLBCL|Sanger|1|1| (100.0)|EBF1|@bohleRoleEarlyBcell2013| |2013|DLBCL|WGS|38|9| (23.7)|ABI3BP|@morinMutationalStructuralAnalysis2013| |2013|MZL|exome|8|0| (0.0)|AMOTL1|@parryWholeExomeSequencing2013| |2014|MCL|exome|28|2| (7.1)|ANK2|@zhangGenomicLandscapeMantle2014| |2014|PMBL|WGS/Sanger|1|1| (100.0)|PTPN1|@gunawardanaRecurrentSomaticMutations2014| |2014|BL|Sanger|3|1| (33.3)|ARHGEF1|@muppidiLossSignalingGa132014| |2015|BL|RNA-seq|1|0 |(0.0)|CCNF|@abateDistinctViralMutational2015| |2015|DLBCL|Sanger|1|1| (100.0)|STAT6|@yildizActivatingSTAT6Mutations2015| |2015|PMBL|Sanger|1|1 |(100.0)|CIITA|@mottokGenomicAlterationsCIITA2015| |2015|PMBL|Sanger|1|1 |(100.0)|CD58|@schneiderAlterationsCD58Gene2015| |2015|PMBL|exome|29|11 |(37.9)|ARIH2|@reichelFlowSortingExome2015| |2015|DLBCL|Sanger|1|0 |(0.0)|MAP2K1|@shinBRAFV600EMAP2K12015| |2016|MZL|exome|1|1 |(100.0)|KLHL6|@ganapathiGeneticLandscapeDural2016| |2016|DLBCL|exome|1|1 |(100.0)|XPO1|@mareschalWholeExomeSequencing2016| |2016|FL|WGS|3|3| (100.0)|ATP6AP1|@okosunRecurrentMTORC1activatingRRAGC2016| |2016|PMBL|Sanger|1|1| (100.0)|XPO1|@jardinRecurrentMutationsExportin2016| |2016|PMBL|exome/Sanger|1|1| (100.0)|NFKBIE|@mansouriFrequentNFKBIEDeletions2016| |2016|FL|exome|1|1 |(100.0)|MAP2K1|@louissaintPediatrictypeNodalFollicular2016| |2016|MZL|exome/panel|31|8| (25.8)|ABCA13|@spinaGeneticsNodalMarginal2016| |2016|MCL|exome|1|1 |(100.0)|CARD11|@wuGeneticHeterogeneityPrimary2016| |2016|DLBCL|exome|2|2| (100.0)|NFKBIE|@morinGeneticLandscapesRelapsed2016| |2017|MZL|panel|2|0| (0.0)|CD9B|@vandenbrandRecurrentMutationsGenes2017| |2017|MZL|exome|28|2| (7.1)|ARHGAP20|@jalladesExomeSequencingIdentifies2017| |2017|FL|exome|22|17 |(77.3)|ARID1A|@krysiakRecurrentSomaticMutations2017| |2017|DLBCL|exome|3|3 |(100.0)|BTK|@albuquerqueEnhancingKnowledgeDiscovery2017| |2017|DLBCL|exome|59|6 |(10.2)|ANKRD17|@reddyGeneticFunctionalDrivers2017| |2018|PMBL|exome|10|1 |(10.0)|AKAP6|@tiacciPervasiveMutationsJAKSTAT2018| |2018|DLBCL|exome|19|2 |(10.5)|CCL4|@chapuyMolecularSubtypesDiffuse2018| |2018|PMBL|Sanger|1|1 |(100.0)|IL4R|@viganoSomaticIL4RMutations2018| |2018|DLBCL|WGS|19|7| (36.8)|AICDA|@arthurGenomewideDiscoverySomatic2018| |2018|DLBCL|exome|16|7| (43.8)|CXCR5|@schmitzGeneticsPathogenesisDiffuse2018| |2019|PMBL|exome|7|4| (57.1)|ACTB|@wienandGenomicAnalysesFlowsorted2019| |2019|BL|exome|1|0 |(0.0)|KMT2C|@zhouSporadicEndemicBurkitt2019| |2019|BL|RNA-seq/exome|39|4| (10.3)|ALPK2|@paneaWholeGenomeLandscape2019| |2019|BL|WGS|13|9| (69.2)|BACH2|@grandeGenomewideDiscoverySomatic2019| |2019|PMBL|exome|21|6| (28.6)|CISH|@mottokIntegrativeGenomicAnalysis2019| |2020|MCL|WGS|5|3| (60.0)|BCOR|@nadeuGenomicEpigenomicInsights2020| |2020|FL|panel|1|1| (100.0)|CTSS|@barariaCathepsinAlterationsInduce2020| |2020|DLBCL|exome/panel|1|1 |(100.0)|MS4A1|@rushtonGeneticEvolutionaryPatterns2020| |2020|MCL|WGS/exome|7|6 |(85.7)|B2M|@pararajalingamCodingNoncodingDrivers2020| |2020|PMBL|panel|10|1 |(10.0)|ACTG1|@deschGenotypingCirculatingTumor2020| |2021|DLBCL|WGS|38|3 |(7.9)|ACTG1|@hubschmannMutationalMechanismsShaping2021| |2021|PMBL|exome|11|5 |(45.5)|ABCA13|@sarkozyMutationalLandscapeGray2021| |2021|PMBL|exome|14|6 |(42.9)|BIRC3|@dunsCharacterizationDLBCLPMBL2021| |2022|BL|panel|25|0| (0.0)|ADAMTS5|@burkhardtClinicalRelevanceMolecular2022| |2023|BL|WGS|6|2| (33.3)|CDKN2C|@thomasGeneticSubgroupsInform2023| |2023|FL|exome|20|1| (5.0)|ABL2|@russler-germainMutationsAssociatedProgression2023| |2023|PMBL|exome|7|2| (28.6)|ARID5B|@gomezUltraDeepSequencingReveals2023|

References

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