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ST6GAL1

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gbanco4 edited this page Dec 17, 2024 · 13 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

[[TOC]]

Relevance tier by entity

Entity Tier Description
DLBCL 2 aSHM target; Although recurrent, the relevance of mutations in DLBCL is tenuous [@arthurGenomewideDiscoverySomatic2018]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

Entity source frequency (%)
DLBCL GAMBL genomes 1.15
DLBCL Schmitz cohort 1.49
DLBCL Reddy cohort 0.90
DLBCL Chapuy cohort 0.85

Mutation pattern and selective pressure estimates

include:dnds_ST6GAL1.md

aSHM regions

chr_name hg19_start hg19_end region regulatory_comment
chr3 186647943 186650177 TSS-2 NA
chr3 186739628 186740875 TSS-1 active_promoter
chr3 186709494 186721749 intron-2 NA
chr3 186782522 186784438 intron-1 strong_enhancer

include:browser_ST6GAL1.md

Expression

include:mermaid_ST6GAL1.md

References

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