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rdmorin edited this page Dec 16, 2024 · 25 revisions

bibliography: 'morinlab.bib' csl: 'NLM.csl' link-citations: true

STAT3

History

%%{init: { 'logLevel': 'debug', 'theme': 'dark' } }%%
timeline
    title Publication timing
2011-07-27 : Morin : DLBCL
2012-03-06 : Lohr : DLBCL
      2014-07-01 : Ohgami : DLBCL
2017-10-10 : Reddy : DLBCL
2018-04-12 : Schmitz : DLBCL
2018-05-01 : Chapuy : DLBCL
2021-05-05 : Hubschmann : DLBCL
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Relevance tier by entity

Entity Tier Description
PMBL 1 high-confidence PMBL/cHL/GZL gene[@ohgamiSTAT3MutationsAre2014]
DLBCL 1 high-confidence DLBCL gene [@lohrDiscoveryPrioritizationSomatic2012; @morinFrequentMutationHistonemodifying2011; @reddyGeneticFunctionalDrivers2017]

Mutation incidence in large patient cohorts (GAMBL reanalysis)

include:DLBCL_STAT3.md

Mutation pattern and selective pressure estimates

Entity aSHM Significant selection dN/dS (missense) dN/dS (nonsense)
BL No No 0.000 0.000
DLBCL No Yes 27.471 12.427
FL No No 34.737 0.000

STAT3 Hotspots

Chromosome Coordinate (hg19) ref>alt HGVSp
chr17 40475330 C>T D566N
chr17 40475325 A>T N567K
chr17 40475318 C>T D570N
chr17 40475317 T>C D570G

View coding variants in ProteinPaint hg19 or hg38

View all variants in GenomePaint hg19 or hg38

STAT3 Expression

References

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