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DESCRIPTION
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DESCRIPTION
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Package: dust
Title: Iterate Multiple Realisations of Stochastic Models
Version: 0.15.3
Authors@R: c(person("Rich", "FitzJohn", role = c("aut", "cre"),
email = "[email protected]"),
person("Alex", "Hill", role = "aut"),
person("John", "Lees", role = "aut"),
person("Imperial College of Science, Technology and Medicine",
role = "cph"))
Description: An Engine for simulation of stochastic models. Includes
support for running stochastic models in parallel, either with
shared or varying parameters. Simulations are run efficiently in
compiled code and can be run with a fraction of simulated states
returned to R, allowing control over memory usage. Support is
provided for building bootstrap particle filter for performing
Sequential Monte Carlo (e.g., Gordon et al. 1993
<doi:10.1049/ip-f-2.1993.0015>). The core of the simulation engine is
the 'xoshiro256**' algorithm (Blackman and Vigna
<arXiv:1805.01407>), and the package is further described in
FitzJohn et al 2021 <doi:10.12688/wellcomeopenres.16466.2>.
URL: https://github.com/mrc-ide/dust
BugReports: https://github.com/mrc-ide/dust/issues
License: MIT + file LICENSE
Encoding: UTF-8
Language: en-GB
Requires: R (>= 4.0.0)
Imports:
R6,
cpp11 (>= 0.4.0),
glue,
pkgbuild (>= 1.2.0),
pkgload,
withr
LinkingTo:
cpp11 (>= 0.4.4)
Suggests:
bench,
brio,
callr,
curl,
dde,
decor,
fs,
knitr,
mockery,
rmarkdown,
testthat (>= 3.0.0)
RoxygenNote: 7.2.3
Roxygen: list(markdown = TRUE)
VignetteBuilder: knitr
Config/testthat/edition: 3