From 359bebe3693b08d6dbe8dec6da96fe10fb1ca89a Mon Sep 17 00:00:00 2001
From: Lilith Whittles <lwhittles@users.noreply.github.com>
Date: Tue, 15 Oct 2024 14:48:02 +0100
Subject: [PATCH] regenerate with dust (0.15.2) and odin.dust (0.3.13)

---
 R/dust.R                         |  4 ++--
 inst/dust/model-targeted-vax.cpp |  9 +++++----
 scripts/generate_odin.R          |  4 ++--
 src/model-targeted-vax.cpp       | 11 ++++++-----
 4 files changed, 15 insertions(+), 13 deletions(-)

diff --git a/R/dust.R b/R/dust.R
index 27c9fb4..8ba0e4b 100644
--- a/R/dust.R
+++ b/R/dust.R
@@ -1,4 +1,4 @@
-## Generated by dust (version 0.15.2) - do not edit
+## Generated by dust (version 0.15.3) - do not edit
 model_targeted_vax <- R6::R6Class(
   "dust",
   cloneable = FALSE,
@@ -292,7 +292,7 @@ model_targeted_vax <- R6::R6Class(
     }
   ))
 class(model_targeted_vax) <- c("dust_generator", class(model_targeted_vax))
-## Generated by odin.dust (version 0.3.11) - do not edit
+## Generated by odin.dust (version 0.3.13) - do not edit
 model_targeted_vax$set("public", "transform_variables", function(y) {
     info <- self$info()
     set_dim <- function(x, dimx) {
diff --git a/inst/dust/model-targeted-vax.cpp b/inst/dust/model-targeted-vax.cpp
index 2ceed98..a2d06d3 100644
--- a/inst/dust/model-targeted-vax.cpp
+++ b/inst/dust/model-targeted-vax.cpp
@@ -1,4 +1,4 @@
-// Generated by odin.dust (version 0.3.11) - do not edit
+// Generated by odin.dust (version 0.3.13) - do not edit
 template <typename real_type, typename container>
 __host__ __device__ real_type odin_sum1(const container x, size_t from, size_t to);
 template <typename real_type, typename container>
@@ -924,7 +924,8 @@ void user_check_array_rank(cpp11::sexp x, const char *name) {
     } else if (N == 2) {
       cpp11::stop("Expected a matrix for '%s'", name);
     } else {
-      cpp11::stop("Expected an array of rank %d for '%s'", N, name);
+      cpp11::stop("Expected an array of rank %d for '%s'",
+                  static_cast<int>(N), name);
     }
   }
 }
@@ -935,8 +936,8 @@ void user_check_array_dim(cpp11::sexp x, const char *name,
   cpp11::integers dim = cpp11::as_cpp<cpp11::integers>(x.attr("dim"));
   for (size_t i = 0; i < N; ++i) {
     if (dim[(int)i] != dim_expected[i]) {
-      Rf_error("Incorrect size of dimension %zu of '%s' (expected %d)",
-               i + 1, name, dim_expected[i]);
+      Rf_error("Incorrect size of dimension %d of '%s' (expected %d)",
+               static_cast<int>(i + 1), name, dim_expected[i]);
     }
   }
 }
diff --git a/scripts/generate_odin.R b/scripts/generate_odin.R
index 32f0585..e0ca48f 100644
--- a/scripts/generate_odin.R
+++ b/scripts/generate_odin.R
@@ -1,6 +1,6 @@
 #!/usr/bin/env Rscript
-if (packageVersion("odin.dust") < "0.2.29") {
-  stop("Please upgrade odin.dust to at least 0.2.29")
+if (packageVersion("odin.dust") < "0.3.13") {
+  stop("Please upgrade odin.dust to at least 0.3.13")
 }
 
 withr::with_options(
diff --git a/src/model-targeted-vax.cpp b/src/model-targeted-vax.cpp
index b173a8c..1d36746 100644
--- a/src/model-targeted-vax.cpp
+++ b/src/model-targeted-vax.cpp
@@ -1,4 +1,4 @@
-// Generated by dust (version 0.15.2) - do not edit
+// Generated by dust (version 0.15.3) - do not edit
 #include <cpp11.hpp>
 
 [[cpp11::register]]
@@ -72,7 +72,7 @@ void dust_cpu_model_targeted_vax_set_stochastic_schedule(SEXP ptr, SEXP time);
 SEXP dust_cpu_model_targeted_vax_ode_statistics(SEXP ptr);
 #include <dust/r/dust.hpp>
 
-// Generated by odin.dust (version 0.3.11) - do not edit
+// Generated by odin.dust (version 0.3.13) - do not edit
 template <typename real_type, typename container>
 __host__ __device__ real_type odin_sum1(const container x, size_t from, size_t to);
 template <typename real_type, typename container>
@@ -998,7 +998,8 @@ void user_check_array_rank(cpp11::sexp x, const char *name) {
     } else if (N == 2) {
       cpp11::stop("Expected a matrix for '%s'", name);
     } else {
-      cpp11::stop("Expected an array of rank %d for '%s'", N, name);
+      cpp11::stop("Expected an array of rank %d for '%s'",
+                  static_cast<int>(N), name);
     }
   }
 }
@@ -1009,8 +1010,8 @@ void user_check_array_dim(cpp11::sexp x, const char *name,
   cpp11::integers dim = cpp11::as_cpp<cpp11::integers>(x.attr("dim"));
   for (size_t i = 0; i < N; ++i) {
     if (dim[(int)i] != dim_expected[i]) {
-      Rf_error("Incorrect size of dimension %zu of '%s' (expected %d)",
-               i + 1, name, dim_expected[i]);
+      Rf_error("Incorrect size of dimension %d of '%s' (expected %d)",
+               static_cast<int>(i + 1), name, dim_expected[i]);
     }
   }
 }