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Support for carrying capacity modification #12

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pwinskill opened this issue Apr 21, 2023 · 0 comments
Open

Support for carrying capacity modification #12

pwinskill opened this issue Apr 21, 2023 · 0 comments
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@pwinskill
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Carrying capcaity modification may come in from several different sources so these need to be multiplied toghther.

  1. Create the carring capcaity scaler matrix inferring number of species (cols) and years (rows) - with baseline adjustments where needed.
  2. Fill matrix with 1 as defaul
  3. If lsm_cov present in the $inteventions multiply each column in the matrix by (1 - lsm_cov)
  4. If $invasive is present in the sitefile, infer the species and multiply the corresponding column of the matrix
  5. Use resulting combined matrix to feed into the new carrying capcity modification functionality of malariasimulation
@pwinskill pwinskill self-assigned this Apr 21, 2023
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