Update test_SampleSheet.py #540
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# This workflow will install Python dependencies, run tests and lint with a single version of Python | |
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
name: Python application | |
on: | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ main ] | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v2 | |
- name: Set up Python 3.9 | |
uses: actions/setup-python@v2 | |
with: | |
python-version: "3.9" | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
pip install flake8 pytest | |
pip install pandas | |
AIRFLOW_VERSION=2.2.3 | |
PYTHON_VERSION=3.9 | |
CONSTRAINT_URL="https://raw.githubusercontent.com/apache/airflow/constraints-${AIRFLOW_VERSION}/constraints-${PYTHON_VERSION}.txt" | |
pip install "apache-airflow==${AIRFLOW_VERSION}" --constraint "${CONSTRAINT_URL}" | |
pip install apache-airflow[cncf.kubernetes] | |
pip install virtualenv | |
pip install pytest-cov | |
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
- name: Lint with flake8 | |
run: | | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Test with pytest and collect coverage | |
run: | | |
pytest --cov=./ --cov-report=xml | |
- name: Upload coverage reports to Codecov with GitHub Action | |
uses: codecov/codecov-action@v3 |