From 8750849cb1730c0be40160ff7a96a16402d0f699 Mon Sep 17 00:00:00 2001 From: darrelln32 Date: Sat, 21 Oct 2023 20:00:51 -0400 Subject: [PATCH] Update LaunchMetrics.py included a recipe called PombeWholeGenome to process S.pombe samples on DRAGEN --- scripts/LaunchMetrics.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/LaunchMetrics.py b/scripts/LaunchMetrics.py index 665cddb..77770b1 100644 --- a/scripts/LaunchMetrics.py +++ b/scripts/LaunchMetrics.py @@ -15,7 +15,7 @@ # Global Variable : we do not want to process these experiments in this script DO_NOT_PROCESS = ["10X_Genomics", "DLP"] # These recipes will be evaluated using DRAGEN because of their larger size of fastqs -RUN_ON_DRAGEN = ["MissionBio", "SingleCellCNV", "MouseWholeGenome", "ChIPSeq", "AmpliconSeq", "HumanWholeGenome"] +RUN_ON_DRAGEN = ["MissionBio", "SingleCellCNV", "MouseWholeGenome", "ChIPSeq", "AmpliconSeq", "HumanWholeGenome", "PombeWholeGenome"] # this list contains the headers of the columns. we will access the data using these listings PICARD_VERSION = "2_23_2" PICARD_JAR = "/igo/home/igo/resources/picard2.23.2/picard.jar "