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Schema v1.2
ao508 edited this page Apr 1, 2022
·
1 revision
Changes from v1.0
Fields added:
Request-level:
- metaDbRequestId (UUID)
Sample-level:
- metaDbSampleId (UUID)
- metaDbPatientId (UUID)
{
"metaDbRequestId": UUID,
"bicAnalysis": true,
"dataAccessEmails": "string",
"dataAnalystEmail": "string",
"dataAnalystName": "string",
"deliveryDate": 0,
"investigatorEmail": "string",
"investigatorName": "string",
"isCmoRequest": true,
"labHeadEmail": "string",
"labHeadName": "string",
"libraryType": "string",
"otherContactEmails": "string",
"piEmail": "string",
"pooledNormals": [
"string"
],
"projectManagerName": "string",
"qcAccessEmails": "string",
"recipe": "string",
"requestId": "string",
"samples": [
{
"metaDbSampleId": "string",
"metaDbPatientId": "string",
"baitSet": "string",
"cfDNA2dBarcode": "string",
"cmoInfoIgoId": "string",
"cmoPatientId": "string",
"cmoSampleClass": "string",
"cmoSampleIdFields": {
"naToExtract": "string",
"normalizedPatientId": "string",
"recipe": "string",
"sampleType": "string"
},
"cmoSampleName": "string",
"collectionYear": "string",
"igoId": "string",
"investigatorSampleId": "string",
"libraries": [
{
"barcodeId": "string",
"barcodeIndex": "string",
"captureConcentrationNm": "string",
"captureInputNg": "string",
"captureName": "string",
"dnaInputNg": 0,
"libraryConcentrationNgul": 0,
"libraryIgoId": "string",
"libraryVolume": 0,
"runs": [
{
"fastqs": [
"string"
],
"flowCellId": "string",
"flowCellLanes": [
0
],
"readLength": "string",
"runDate": "string",
"runId": "string",
"runMode": "string"
}
]
}
],
"oncoTreeCode": "string",
"preservation": "string",
"qcReports": [
{
"IGORecommendation": "string",
"comments": "string",
"investigatorDecision": "string",
"qcReportType": "DNA"
}
],
"sampleName": "string",
"sampleOrigin": "string",
"sex": "string",
"species": "string",
"specimenType": "string",
"tissueLocation": "string",
"tubeId": "string",
"tumorOrNormal": "string"
}
. . .
],
"strand": "string"
}