DESCRIPTION

Package: fishHook
Title: R Package for performing Gamma-Poisson regression on somatic mutation count data
Version: 0.1
Authors@R: c(person(given = "Marcin",
    family = "Imielinski", role = c("aut", "cre"), email = "mai9037@med.cornell.edu"))
Description: Package for performing Gamma-Poisson regression on somatic mutation
    count data with covariates to identify mutational enrichment or depletion in a
    statistically-calibrated fashion.
biocViews:
  bioc::3.10/GenomeInfoDb,
  bioc::3.10/S4Vectors,
  bioc::3.10/IRanges,      
  bioc::3.10/XVector,
  bioc::3.10/GenomicRanges,
  bioc::3.10/rtracklayer,
  bioc::3.10/VariantAnnotation
Remotes:
  github::mskilab/gUtils
Depends:
    R (>= 3.6.0),
    GenomicRanges,
    gUtils, 
    plotly,  
    data.table (>= 1.9)
Imports:
    MASS,
    Matrix,
    rtracklayer,
    zoo,
    GenomeInfoDb,
    S4Vectors,
    BiocGenerics,
    R6
Suggests:
    parallel,
    testthat
License: GPL-2
LazyData: true
RoxygenNote: 7.1.1