Merge pull request #81 from cxhernandez/update-docs

Update docs

README.md

@@ -1,12 +1,12 @@
 MSMExplorer: data visualizations for biomolecular dynamics
 ==========================================================
 
-[![Build Status](https://travis-ci.org/msmexplorer/msmexplorer.svg?branch=master)] (https://travis-ci.org/msmexplorer/msmexplorer)
+[![Build Status](https://travis-ci.org/msmexplorer/msmexplorer.svg?branch=master)](https://travis-ci.org/msmexplorer/msmexplorer)
 [![Build status](https://ci.appveyor.com/api/projects/status/038hirce0vlx2847?svg=true)](https://ci.appveyor.com/project/cxhernandez/msmexplorer)
 [![Coverage Status](https://coveralls.io/repos/github/msmexplorer/msmexplorer/badge.svg?branch=master)](https://coveralls.io/github/msmexplorer/msmexplorer?branch=master)
 [![PyPI version](https://badge.fury.io/py/msmexplorer.svg)](http://badge.fury.io/py/msmexplorer)
-[![License](https://img.shields.io/badge/license-MIT-red.svg?style=flat)]  (https://opensource.org/licenses/MIT)
-[![Documentation](https://img.shields.io/badge/docs-latest-blue.svg?style=flat)] (http://msmbuilder.org/msmexplorer/)
+[![License](https://img.shields.io/badge/license-MIT-red.svg?style=flat)](https://opensource.org/licenses/MIT)
+[![Documentation](https://img.shields.io/badge/docs-latest-blue.svg?style=flat)](http://msmbuilder.org/msmexplorer/)
 [![DOI](https://zenodo.org/badge/47228682.svg)](https://zenodo.org/badge/latestdoi/47228682)
 
 

docs/papers.rst

@@ -6,3 +6,22 @@ Publications Using MSMExplorer
 Below is an ever-growing list of publications that use MSMExplorer plots. If
 you've used MSMExplorer in your paper, feel free to add it here via pull
 request!
+
+
+A Network of Conformational Transitions in the Apo Form of NDM-1 Enzyme Revealed by MD Simulation and a Markov State Model
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+.. image:: http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/jpcbfk/0/jpcbfk.ahead-of-print/acs.jpcb.7b00062/20170329/images/medium/jp-2017-00062b_0008.gif
+
+.. code:: bibtex
+
+  @article{Gao2017,
+    doi = {10.1021/acs.jpcb.7b00062},
+    url = {https://doi.org/10.1021%2Facs.jpcb.7b00062},
+    year  = {2017},
+    month = {mar},
+    publisher = {American Chemical Society ({ACS})},
+    author = {Kaifu Gao and Yunjie Zhao},
+    title = {A Network of Conformational Transitions in the Apo Form of {NDM}-1 Enzyme Revealed by {MD} Simulation and a Markov State Model},
+    journal = {The Journal of Physical Chemistry B}
+  }