From 9b71eda1ec0dfe5f88de11a07140adfb29c430a5 Mon Sep 17 00:00:00 2001 From: Maurizio Salvatore Podda Date: Mon, 27 May 2024 13:04:24 +0200 Subject: [PATCH] test r --- workflow/R/config_all.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflow/R/config_all.R b/workflow/R/config_all.R index 6b40b03..6472f4b 100755 --- a/workflow/R/config_all.R +++ b/workflow/R/config_all.R @@ -42,7 +42,7 @@ group.colors_pie_chart <- c( "#708090", "#E6E6E6", "#D9D9D9", "#008bbf", ## directories txt_samples <- "/home/runner/work/isoworm/isoworm/test_data" results_dir <- "/home/runner/work/isoworm/isoworm/results" -polyA_bam_dir <- "/home/runner/work/isoworm/isoworm/results/polyA" +polyA_bam_dir <- "/home/runner/work/isoworm/isoworm/results/polyA/bam" final_output <- "/home/runner/work/isoworm/isoworm/workflow/R" ## total salmon indexDir <- file.path("/home/runner/work/isoworm/isoworm/test_data/salmon_index_v43")