test r

mspodda · May 24, 2024 · bb851a5 · bb851a5
1 parent 2034f77
commit bb851a5
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/workflow/snakefile_final.smk b/workflow/snakefile_final.smk
@@ -425,7 +425,6 @@ rule custom_r_script:
 ## Plot the pie charts and the ratio boxplot
 rule salmon_r_script:
     input:
-        salmon_sf =  config['datadirs']['salmon'] + "/{file}/"  + 'quant.sf'
     params:
         r_salmon = config['scripts']['r_salmon']
     output: