diff --git a/workflow/util/script.sh b/workflow/util/script.sh index bcc0cec..bdddb59 100755 --- a/workflow/util/script.sh +++ b/workflow/util/script.sh @@ -1,2 +1,6 @@ +ls +ls results/ +ls results//fastq cd results/fastq/$1 -ffq --ftp $1 | grep -Eo '"url": "[^"]*"' | grep -o ftp.sra.*$ | sed 's/.$//' | xargs curl -O -C - -o nul -# +ffq --ftp $1 | grep -Eo '"url": "[^"]*"' | grep -o ftp.sra.*$ | sed 's/.$//' | xargs curl -O -C - -o nul +ls \ No newline at end of file