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  • django-1AHS Public

    Python Updated Sep 14, 2024
  • scavenger Public

    Python Updated Aug 21, 2024
  • Pairiscope Public

    A package that leverages bloom filters to store discretized microbial pair relationships in a relatively small memory footprint

    Python The Unlicense Updated Feb 13, 2024
  • QUOREM Public

    QUOREM: Query, Unify, and Organize Research on the Ecology of Microorganisms

    HTML 1 4 Updated Mar 31, 2023
  • Data and scripts for an in-progress analysis of microbial taxonomic shifts in experimental gingivitis.

    Jupyter Notebook 1 MIT License Updated Jan 18, 2023
  • HTML MIT License Updated May 16, 2022
  • A robot powered training repository 🤖

    HTML MIT License Updated May 16, 2022
  • Ananke2 Public

    Ananke2: A Python package for generating succinct indexes of microbial community structure

    Python 1 MIT License Updated Mar 23, 2022
  • An in-progress analysis of the neonatal microbiome. This repository holds QIIME artifacts and Jupyter notebooks.

    Jupyter Notebook 1 Updated Mar 9, 2022
  • q2_ananke Public

    Time-series clustering -- now for QIIME2!

    Jupyter Notebook MIT License Updated May 26, 2021
  • CSS 1 Updated Jul 26, 2019
  • Scripts and data files for the bulk of the analysis for an under-review manuscript surveying the effect of depth on the microbial community of Arctic soils.

    Jupyter Notebook 1 MIT License Updated Jul 22, 2019
  • VAware Public

    C++ 2 Updated May 27, 2019
  • Just as it says on the tin.

    Shell Updated May 14, 2019
  • metahcr_v1 Public

    Forked from metahcr/metahcr_v1

    MetaHCR - Metagenomics on Hydrocarbon Resources

    Python GNU General Public License v3.0 Updated Nov 15, 2018
  • Data and scripts for an in-progress analysis of the Culex nigripalpus microbiome from Floridian mosquitoes.

    Jupyter Notebook 1 MIT License Updated Nov 12, 2018
  • q2-dada2 Public

    Forked from qiime2/q2-dada2

    QIIME 2 plugin wrapping DADA2

    Python BSD 3-Clause "New" or "Revised" License Updated Nov 6, 2018
  • Data files for an in-progress manuscript on Refractory Periodontitis.

    Jupyter Notebook MIT License Updated Aug 29, 2018
  • Taxon- and phylogenetic-based beta diversity measures.

    C++ GNU General Public License v3.0 Updated May 30, 2018
  • seqan Public

    Forked from seqan/seqan

    SeqAn's official repository.

    C++ Other Updated Jan 5, 2018
  • site Public

    Forked from joostdecock/site

    The freesewing website

    HTML GNU General Public License v3.0 Updated Dec 22, 2017
  • data Public

    Forked from joostdecock/data

    Data API for freesewing

    PHP GNU General Public License v3.0 Updated Dec 20, 2017
  • core Public

    Forked from joostdecock/core

    Freesewing is an open source platform for made-to-measure sewing patterns

    PHP GNU General Public License v3.0 Updated Dec 20, 2017
  • demo Public

    Forked from workybee/demo

    Stand-along version of the freesewing demo

    CSS Updated Oct 1, 2017
  • Scripts useful for reproducing the results in the Ananke manuscript published in PeerJ.

    R MIT License Updated Jul 14, 2017
  • q2-plotly Public

    Python Updated Dec 7, 2016
  • biom-format Public

    Forked from biocore/biom-format

    The Biological Observation Matrix (BIOM) Format Project

    C Other Updated Oct 9, 2014
  • Updated Sep 13, 2014
  • Python Updated Nov 7, 2012
  • try_git Public

    1 Updated Jul 17, 2012