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Re-ran benchmarks once more
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nathanaelbosch committed Nov 12, 2023
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834 changes: 417 additions & 417 deletions docs/src/benchmarks/figures/hodgkinhuxley_2_1.svg
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740 changes: 370 additions & 370 deletions docs/src/benchmarks/figures/lotkavolterra_10_1.svg
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266 changes: 133 additions & 133 deletions docs/src/benchmarks/figures/lotkavolterra_2_1.svg
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608 changes: 304 additions & 304 deletions docs/src/benchmarks/figures/lotkavolterra_3_1.svg
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600 changes: 300 additions & 300 deletions docs/src/benchmarks/figures/lotkavolterra_4_1.svg
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604 changes: 302 additions & 302 deletions docs/src/benchmarks/figures/lotkavolterra_5_1.svg
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614 changes: 306 additions & 308 deletions docs/src/benchmarks/figures/lotkavolterra_6_1.svg
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636 changes: 318 additions & 318 deletions docs/src/benchmarks/figures/lotkavolterra_7_1.svg
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732 changes: 366 additions & 366 deletions docs/src/benchmarks/figures/lotkavolterra_9_1.svg
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208 changes: 104 additions & 104 deletions docs/src/benchmarks/figures/multi-language-wrappers_10_1.svg
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702 changes: 351 additions & 351 deletions docs/src/benchmarks/figures/multi-language-wrappers_13_1.svg
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282 changes: 141 additions & 141 deletions docs/src/benchmarks/figures/pleiades_2_1.svg
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618 changes: 309 additions & 309 deletions docs/src/benchmarks/figures/pleiades_3_1.svg

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24 changes: 13 additions & 11 deletions docs/src/benchmarks/hodgkinhuxley.md
Original file line number Diff line number Diff line change
Expand Up @@ -297,13 +297,15 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Project.toml`
[65888b18] ParameterizedFunctions v5.16.0
[91a5bcdd] Plots v1.39.0
[bf3e78b0] ProbNumDiffEq v0.13.0 `~/.julia/dev/ProbNumDiffEq`
[0bca4576] SciMLBase v2.7.3
[0bca4576] SciMLBase v2.7.3
[505e40e9] SciPyDiffEq v0.2.1
[ce78b400] SimpleUnPack v1.1.0
[90137ffa] StaticArrays v1.6.5
[c3572dad] Sundials v4.20.1
[44d3d7a6] Weave v0.10.12
[0518478a] deSolveDiffEq v0.1.1
Info Packages marked with ⌃ have new versions available and may be upgradab
le.
```


Expand Down Expand Up @@ -434,7 +436,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[50d2b5c4] Lazy v0.15.1
[1d6d02ad] LeftChildRightSiblingTrees v0.2.0
[d3d80556] LineSearches v7.2.0
[7ed4a6bd] LinearSolve v2.17.1
[7ed4a6bd] LinearSolve v2.17.1
[2ab3a3ac] LogExpFunctions v0.3.26
[e6f89c97] LoggingExtras v1.0.3
[bdcacae8] LoopVectorization v0.12.166
Expand All @@ -444,7 +446,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[d8e11817] MLStyle v0.4.17
[1914dd2f] MacroTools v0.5.11
[d125e4d3] ManualMemory v0.1.8
[739be429] MbedTLS v1.1.7
[739be429] MbedTLS v1.1.7
[442fdcdd] Measures v0.3.2
[e1d29d7a] Missings v1.1.0
[961ee093] ModelingToolkit v8.72.2
Expand All @@ -465,12 +467,12 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[429524aa] Optim v1.7.8
[bac558e1] OrderedCollections v1.6.2
[1dea7af3] OrdinaryDiffEq v6.59.0
[90014a1f] PDMats v0.11.28
[90014a1f] PDMats v0.11.28
[fe68d972] PSDMatrices v0.4.6
[65ce6f38] PackageExtensionCompat v1.0.2
[65888b18] ParameterizedFunctions v5.16.0
[d96e819e] Parameters v0.12.3
[69de0a69] Parsers v2.7.2
[69de0a69] Parsers v2.7.2
[b98c9c47] Pipe v1.3.0
[32113eaa] PkgBenchmark v0.2.12
[ccf2f8ad] PlotThemes v3.1.0
Expand All @@ -489,7 +491,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[27ebfcd6] Primes v0.5.4
[bf3e78b0] ProbNumDiffEq v0.13.0 `~/.julia/dev/ProbNumDiffEq`
[33c8b6b6] ProgressLogging v0.1.4
[438e738f] PyCall v1.96.1
[438e738f] PyCall v1.96.1
[1fd47b50] QuadGK v2.9.1
[6f49c342] RCall v0.13.18
[74087812] Random123 v1.6.1
Expand All @@ -498,7 +500,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[3cdcf5f2] RecipesBase v1.3.4
[01d81517] RecipesPipeline v0.6.12
[731186ca] RecursiveArrayTools v2.38.10
[f2c3362d] RecursiveFactorization v0.2.20
[f2c3362d] RecursiveFactorization v0.2.20
[189a3867] Reexport v1.2.2
[05181044] RelocatableFolders v1.0.1
[ae029012] Requires v1.3.0
Expand All @@ -509,7 +511,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[fdea26ae] SIMD v3.4.6
[94e857df] SIMDTypes v0.1.0
[476501e8] SLEEFPirates v0.6.42
[0bca4576] SciMLBase v2.7.3
[0bca4576] SciMLBase v2.7.3
[e9a6253c] SciMLNLSolve v0.1.9
[c0aeaf25] SciMLOperators v0.3.7
[505e40e9] SciPyDiffEq v0.2.1
Expand Down Expand Up @@ -710,9 +712,9 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[8e850b90] libblastrampoline_jll v5.8.0+0
[8e850ede] nghttp2_jll v1.48.0+0
[3f19e933] p7zip_jll v17.4.0+0
Info Packages marked with ⌅ have new versions available but compatibility c
onstraints restrict them from upgrading. To see why use `status --outdated
-m`
Info Packages marked with ⌃ and ⌅ have new versions available, but those wi
th ⌅ are restricted by compatibility constraints from upgrading. To see why
use `status --outdated -m`
```


24 changes: 13 additions & 11 deletions docs/src/benchmarks/lotkavolterra.md
Original file line number Diff line number Diff line change
Expand Up @@ -531,13 +531,15 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Project.toml`
[65888b18] ParameterizedFunctions v5.16.0
[91a5bcdd] Plots v1.39.0
[bf3e78b0] ProbNumDiffEq v0.13.0 `~/.julia/dev/ProbNumDiffEq`
[0bca4576] SciMLBase v2.7.3
[0bca4576] SciMLBase v2.7.3
[505e40e9] SciPyDiffEq v0.2.1
[ce78b400] SimpleUnPack v1.1.0
[90137ffa] StaticArrays v1.6.5
[c3572dad] Sundials v4.20.1
[44d3d7a6] Weave v0.10.12
[0518478a] deSolveDiffEq v0.1.1
Info Packages marked with ⌃ have new versions available and may be upgradab
le.
```


Expand Down Expand Up @@ -668,7 +670,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[50d2b5c4] Lazy v0.15.1
[1d6d02ad] LeftChildRightSiblingTrees v0.2.0
[d3d80556] LineSearches v7.2.0
[7ed4a6bd] LinearSolve v2.17.1
[7ed4a6bd] LinearSolve v2.17.1
[2ab3a3ac] LogExpFunctions v0.3.26
[e6f89c97] LoggingExtras v1.0.3
[bdcacae8] LoopVectorization v0.12.166
Expand All @@ -678,7 +680,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[d8e11817] MLStyle v0.4.17
[1914dd2f] MacroTools v0.5.11
[d125e4d3] ManualMemory v0.1.8
[739be429] MbedTLS v1.1.7
[739be429] MbedTLS v1.1.7
[442fdcdd] Measures v0.3.2
[e1d29d7a] Missings v1.1.0
[961ee093] ModelingToolkit v8.72.2
Expand All @@ -699,12 +701,12 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[429524aa] Optim v1.7.8
[bac558e1] OrderedCollections v1.6.2
[1dea7af3] OrdinaryDiffEq v6.59.0
[90014a1f] PDMats v0.11.28
[90014a1f] PDMats v0.11.28
[fe68d972] PSDMatrices v0.4.6
[65ce6f38] PackageExtensionCompat v1.0.2
[65888b18] ParameterizedFunctions v5.16.0
[d96e819e] Parameters v0.12.3
[69de0a69] Parsers v2.7.2
[69de0a69] Parsers v2.7.2
[b98c9c47] Pipe v1.3.0
[32113eaa] PkgBenchmark v0.2.12
[ccf2f8ad] PlotThemes v3.1.0
Expand All @@ -723,7 +725,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[27ebfcd6] Primes v0.5.4
[bf3e78b0] ProbNumDiffEq v0.13.0 `~/.julia/dev/ProbNumDiffEq`
[33c8b6b6] ProgressLogging v0.1.4
[438e738f] PyCall v1.96.1
[438e738f] PyCall v1.96.1
[1fd47b50] QuadGK v2.9.1
[6f49c342] RCall v0.13.18
[74087812] Random123 v1.6.1
Expand All @@ -732,7 +734,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[3cdcf5f2] RecipesBase v1.3.4
[01d81517] RecipesPipeline v0.6.12
[731186ca] RecursiveArrayTools v2.38.10
[f2c3362d] RecursiveFactorization v0.2.20
[f2c3362d] RecursiveFactorization v0.2.20
[189a3867] Reexport v1.2.2
[05181044] RelocatableFolders v1.0.1
[ae029012] Requires v1.3.0
Expand All @@ -743,7 +745,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[fdea26ae] SIMD v3.4.6
[94e857df] SIMDTypes v0.1.0
[476501e8] SLEEFPirates v0.6.42
[0bca4576] SciMLBase v2.7.3
[0bca4576] SciMLBase v2.7.3
[e9a6253c] SciMLNLSolve v0.1.9
[c0aeaf25] SciMLOperators v0.3.7
[505e40e9] SciPyDiffEq v0.2.1
Expand Down Expand Up @@ -944,9 +946,9 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[8e850b90] libblastrampoline_jll v5.8.0+0
[8e850ede] nghttp2_jll v1.48.0+0
[3f19e933] p7zip_jll v17.4.0+0
Info Packages marked with ⌅ have new versions available but compatibility c
onstraints restrict them from upgrading. To see why use `status --outdated
-m`
Info Packages marked with ⌃ and ⌅ have new versions available, but those wi
th ⌅ are restricted by compatibility constraints from upgrading. To see why
use `status --outdated -m`
```


24 changes: 13 additions & 11 deletions docs/src/benchmarks/multi-language-wrappers.md
Original file line number Diff line number Diff line change
Expand Up @@ -392,13 +392,15 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Project.toml`
[65888b18] ParameterizedFunctions v5.16.0
[91a5bcdd] Plots v1.39.0
[bf3e78b0] ProbNumDiffEq v0.13.0 `~/.julia/dev/ProbNumDiffEq`
[0bca4576] SciMLBase v2.7.3
[0bca4576] SciMLBase v2.7.3
[505e40e9] SciPyDiffEq v0.2.1
[ce78b400] SimpleUnPack v1.1.0
[90137ffa] StaticArrays v1.6.5
[c3572dad] Sundials v4.20.1
[44d3d7a6] Weave v0.10.12
[0518478a] deSolveDiffEq v0.1.1
Info Packages marked with ⌃ have new versions available and may be upgradab
le.
```


Expand Down Expand Up @@ -529,7 +531,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[50d2b5c4] Lazy v0.15.1
[1d6d02ad] LeftChildRightSiblingTrees v0.2.0
[d3d80556] LineSearches v7.2.0
[7ed4a6bd] LinearSolve v2.17.1
[7ed4a6bd] LinearSolve v2.17.1
[2ab3a3ac] LogExpFunctions v0.3.26
[e6f89c97] LoggingExtras v1.0.3
[bdcacae8] LoopVectorization v0.12.166
Expand All @@ -539,7 +541,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[d8e11817] MLStyle v0.4.17
[1914dd2f] MacroTools v0.5.11
[d125e4d3] ManualMemory v0.1.8
[739be429] MbedTLS v1.1.7
[739be429] MbedTLS v1.1.7
[442fdcdd] Measures v0.3.2
[e1d29d7a] Missings v1.1.0
[961ee093] ModelingToolkit v8.72.2
Expand All @@ -560,12 +562,12 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[429524aa] Optim v1.7.8
[bac558e1] OrderedCollections v1.6.2
[1dea7af3] OrdinaryDiffEq v6.59.0
[90014a1f] PDMats v0.11.28
[90014a1f] PDMats v0.11.28
[fe68d972] PSDMatrices v0.4.6
[65ce6f38] PackageExtensionCompat v1.0.2
[65888b18] ParameterizedFunctions v5.16.0
[d96e819e] Parameters v0.12.3
[69de0a69] Parsers v2.7.2
[69de0a69] Parsers v2.7.2
[b98c9c47] Pipe v1.3.0
[32113eaa] PkgBenchmark v0.2.12
[ccf2f8ad] PlotThemes v3.1.0
Expand All @@ -584,7 +586,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[27ebfcd6] Primes v0.5.4
[bf3e78b0] ProbNumDiffEq v0.13.0 `~/.julia/dev/ProbNumDiffEq`
[33c8b6b6] ProgressLogging v0.1.4
[438e738f] PyCall v1.96.1
[438e738f] PyCall v1.96.1
[1fd47b50] QuadGK v2.9.1
[6f49c342] RCall v0.13.18
[74087812] Random123 v1.6.1
Expand All @@ -593,7 +595,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[3cdcf5f2] RecipesBase v1.3.4
[01d81517] RecipesPipeline v0.6.12
[731186ca] RecursiveArrayTools v2.38.10
[f2c3362d] RecursiveFactorization v0.2.20
[f2c3362d] RecursiveFactorization v0.2.20
[189a3867] Reexport v1.2.2
[05181044] RelocatableFolders v1.0.1
[ae029012] Requires v1.3.0
Expand All @@ -604,7 +606,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[fdea26ae] SIMD v3.4.6
[94e857df] SIMDTypes v0.1.0
[476501e8] SLEEFPirates v0.6.42
[0bca4576] SciMLBase v2.7.3
[0bca4576] SciMLBase v2.7.3
[e9a6253c] SciMLNLSolve v0.1.9
[c0aeaf25] SciMLOperators v0.3.7
[505e40e9] SciPyDiffEq v0.2.1
Expand Down Expand Up @@ -805,9 +807,9 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[8e850b90] libblastrampoline_jll v5.8.0+0
[8e850ede] nghttp2_jll v1.48.0+0
[3f19e933] p7zip_jll v17.4.0+0
Info Packages marked with ⌅ have new versions available but compatibility c
onstraints restrict them from upgrading. To see why use `status --outdated
-m`
Info Packages marked with ⌃ and ⌅ have new versions available, but those wi
th ⌅ are restricted by compatibility constraints from upgrading. To see why
use `status --outdated -m`
```


38 changes: 14 additions & 24 deletions docs/src/benchmarks/pleiades.md
Original file line number Diff line number Diff line change
Expand Up @@ -136,19 +136,7 @@ plot(wp,
)
```

```
Error: MethodError: no method matching LinearAlgebra.SingularException()
Closest candidates are:
LinearAlgebra.SingularException(!Matched::Int64)
@ LinearAlgebra ~/.julia/juliaup/julia-1.9.3+0.x64.linux.gnu/share/julia
/stdlib/v1.9/LinearAlgebra/src/exceptions.jl:21
LinearAlgebra.SingularException(!Matched::Any)
@ LinearAlgebra ~/.julia/juliaup/julia-1.9.3+0.x64.linux.gnu/share/julia
/stdlib/v1.9/LinearAlgebra/src/exceptions.jl:21
```


![](figures/pleiades_3_1.svg)



Expand Down Expand Up @@ -203,13 +191,15 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Project.toml`
[65888b18] ParameterizedFunctions v5.16.0
[91a5bcdd] Plots v1.39.0
[bf3e78b0] ProbNumDiffEq v0.13.0 `~/.julia/dev/ProbNumDiffEq`
[0bca4576] SciMLBase v2.7.3
[0bca4576] SciMLBase v2.7.3
[505e40e9] SciPyDiffEq v0.2.1
[ce78b400] SimpleUnPack v1.1.0
[90137ffa] StaticArrays v1.6.5
[c3572dad] Sundials v4.20.1
[44d3d7a6] Weave v0.10.12
[0518478a] deSolveDiffEq v0.1.1
Info Packages marked with ⌃ have new versions available and may be upgradab
le.
```


Expand Down Expand Up @@ -340,7 +330,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[50d2b5c4] Lazy v0.15.1
[1d6d02ad] LeftChildRightSiblingTrees v0.2.0
[d3d80556] LineSearches v7.2.0
[7ed4a6bd] LinearSolve v2.17.1
[7ed4a6bd] LinearSolve v2.17.1
[2ab3a3ac] LogExpFunctions v0.3.26
[e6f89c97] LoggingExtras v1.0.3
[bdcacae8] LoopVectorization v0.12.166
Expand All @@ -350,7 +340,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[d8e11817] MLStyle v0.4.17
[1914dd2f] MacroTools v0.5.11
[d125e4d3] ManualMemory v0.1.8
[739be429] MbedTLS v1.1.7
[739be429] MbedTLS v1.1.7
[442fdcdd] Measures v0.3.2
[e1d29d7a] Missings v1.1.0
[961ee093] ModelingToolkit v8.72.2
Expand All @@ -371,12 +361,12 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[429524aa] Optim v1.7.8
[bac558e1] OrderedCollections v1.6.2
[1dea7af3] OrdinaryDiffEq v6.59.0
[90014a1f] PDMats v0.11.28
[90014a1f] PDMats v0.11.28
[fe68d972] PSDMatrices v0.4.6
[65ce6f38] PackageExtensionCompat v1.0.2
[65888b18] ParameterizedFunctions v5.16.0
[d96e819e] Parameters v0.12.3
[69de0a69] Parsers v2.7.2
[69de0a69] Parsers v2.7.2
[b98c9c47] Pipe v1.3.0
[32113eaa] PkgBenchmark v0.2.12
[ccf2f8ad] PlotThemes v3.1.0
Expand All @@ -395,7 +385,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[27ebfcd6] Primes v0.5.4
[bf3e78b0] ProbNumDiffEq v0.13.0 `~/.julia/dev/ProbNumDiffEq`
[33c8b6b6] ProgressLogging v0.1.4
[438e738f] PyCall v1.96.1
[438e738f] PyCall v1.96.1
[1fd47b50] QuadGK v2.9.1
[6f49c342] RCall v0.13.18
[74087812] Random123 v1.6.1
Expand All @@ -404,7 +394,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[3cdcf5f2] RecipesBase v1.3.4
[01d81517] RecipesPipeline v0.6.12
[731186ca] RecursiveArrayTools v2.38.10
[f2c3362d] RecursiveFactorization v0.2.20
[f2c3362d] RecursiveFactorization v0.2.20
[189a3867] Reexport v1.2.2
[05181044] RelocatableFolders v1.0.1
[ae029012] Requires v1.3.0
Expand All @@ -415,7 +405,7 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[fdea26ae] SIMD v3.4.6
[94e857df] SIMDTypes v0.1.0
[476501e8] SLEEFPirates v0.6.42
[0bca4576] SciMLBase v2.7.3
[0bca4576] SciMLBase v2.7.3
[e9a6253c] SciMLNLSolve v0.1.9
[c0aeaf25] SciMLOperators v0.3.7
[505e40e9] SciPyDiffEq v0.2.1
Expand Down Expand Up @@ -616,9 +606,9 @@ Status `~/.julia/dev/ProbNumDiffEq/benchmarks/Manifest.toml`
[8e850b90] libblastrampoline_jll v5.8.0+0
[8e850ede] nghttp2_jll v1.48.0+0
[3f19e933] p7zip_jll v17.4.0+0
Info Packages marked with ⌅ have new versions available but compatibility c
onstraints restrict them from upgrading. To see why use `status --outdated
-m`
Info Packages marked with ⌃ and ⌅ have new versions available, but those wi
th ⌅ are restricted by compatibility constraints from upgrading. To see why
use `status --outdated -m`
```


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