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25 Open 34 Closed
25 Open 34 Closed
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Issues list

errors in installation manual page
#63 opened Dec 29, 2024 by jianglinghan
Line 90 Code Error in zpaste.c - 'k' Should Be 'i'?
#62 opened Jun 6, 2024 by luluZuo
All reads for filtered out in createASVCF for single end bam files
#61 opened May 17, 2024 by xfanhuang
Problems with multiple definitions of certain header files during configuration during installation
#60 opened Apr 17, 2024 by atw520
Compiling requires -fcommon flag on GCC v10+
#59 opened Mar 15, 2024 by austintwang
1
potential bug in pasteFiles
#58 opened Dec 5, 2023 by xfanhuang
Library size factor from DESeq2 as Offset
#57 opened Jul 12, 2022 by KRSBar
Z-score or effect and standard error
#55 opened Dec 15, 2021 by plbngl
6
fSNP not tested?
#53 opened Dec 8, 2021 by plantformatics
Number of fSNP is 0 but lead QTL within peak
#52 opened Nov 10, 2021 by Zepeng-Mu
QTL Enrichment Analysis
#42 opened May 30, 2020 by aileenlikexin
Permutations and RASQUAL results
#41 opened May 5, 2020 by SaideepGona
1
ASVCF Memory Usage
#40 opened Apr 21, 2020 by SaideepGona
6
Include other covariates
#39 opened Mar 2, 2020 by plbngl
2
Mandatory inputs
#37 opened Feb 21, 2020 by js8hh
3
tutorial for using RASQUAL on ATAC-seq data to find ATAC-QTL
#36 opened Feb 6, 2020 by wlwtan
1
Visualizing QTLs (coverage boxplot)
#35 opened Feb 6, 2020 by wlwtan
1
How can reference allele bias be calculated per SNP
#33 opened Sep 10, 2019 by kwcurrin
6
RASQUAL with biological replicates
#28 opened Jun 29, 2019 by agolicz
3
Understanding Effect Sizes
#27 opened Jun 24, 2019 by arielmadr
1
Can we use non sequencing based inputs?
#20 opened Apr 25, 2019 by bioinfograd
1
2707 caQTL in RASQUAL paper
#19 opened Apr 19, 2019 by YaCui
12
if Indel can be used in VCF input now
#18 opened Mar 13, 2019 by azyro
3
qvalue nan error
#11 opened Feb 12, 2018 by girdhar3
4
segmentation fault with covariates file
#10 opened Feb 12, 2018 by girdhar3
2
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