From 2f8b1c1cff9a00da06ff68c1449f049e3f59c5ce Mon Sep 17 00:00:00 2001 From: Jennifer Vendetti Date: Tue, 19 Mar 2024 11:37:21 -0700 Subject: [PATCH 01/11] Reset branch specifier to develop --- Gemfile | 8 ++++---- Gemfile.lock | 16 ++++++++-------- 2 files changed, 12 insertions(+), 12 deletions(-) diff --git a/Gemfile b/Gemfile index f136281f..8b180c6e 100644 --- a/Gemfile +++ b/Gemfile @@ -24,10 +24,10 @@ gem 'sys-proctable' gem 'cube-ruby', require: 'cube' # NCBO -gem 'goo', github: 'ncbo/goo', branch: 'master' -gem 'ncbo_annotator', github: 'ncbo/ncbo_annotator', branch: 'master' -gem 'ontologies_linked_data', github: 'ncbo/ontologies_linked_data', branch: 'master' -gem 'sparql-client', github: 'ncbo/sparql-client', branch: 'master' +gem 'goo', github: 'ncbo/goo', branch: 'develop' +gem 'ncbo_annotator', github: 'ncbo/ncbo_annotator', branch: 'develop' +gem 'ontologies_linked_data', github: 'ncbo/ontologies_linked_data', branch: 'develop' +gem 'sparql-client', github: 'ncbo/sparql-client', branch: 'develop' group :test do gem 'email_spec' diff --git a/Gemfile.lock b/Gemfile.lock index 4dfe242e..b4cefd61 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -1,7 +1,7 @@ GIT remote: https://github.com/ncbo/goo.git - revision: 75436fe8e387febc53e34ee31ff0e6dd837a9d3f - branch: master + revision: 87e991b0e720c580a71e2c2c10f9ab44183db322 + branch: develop specs: goo (0.0.2) addressable (~> 2.8) @@ -15,8 +15,8 @@ GIT GIT remote: https://github.com/ncbo/ncbo_annotator.git - revision: 63c986880aa88c9384043e6611a682434a14aba7 - branch: master + revision: fe0783c542479ed0a12da5663ef28e1673e80eba + branch: develop specs: ncbo_annotator (0.0.1) goo @@ -26,8 +26,8 @@ GIT GIT remote: https://github.com/ncbo/ontologies_linked_data.git - revision: b6df920d03af15ee35a3a7c31078c6ea263ba41d - branch: master + revision: a466d530877cb48cdfb811d0b61ecaabd2b835eb + branch: develop specs: ontologies_linked_data (0.0.1) activesupport @@ -46,8 +46,8 @@ GIT GIT remote: https://github.com/ncbo/sparql-client.git - revision: d418d56a6c9ff5692f925b45739a2a1c66bca851 - branch: master + revision: 55e7dbf858eb571c767bc67868f9af61663859cb + branch: develop specs: sparql-client (1.0.1) json_pure (>= 1.4) From 2af844a10a31ae808e85821bc00e8d30e0504d20 Mon Sep 17 00:00:00 2001 From: mdorf Date: Wed, 24 Apr 2024 12:39:36 -0700 Subject: [PATCH 02/11] Gemfile.lock update --- Gemfile.lock | 38 +++++++++++++++++++------------------- 1 file changed, 19 insertions(+), 19 deletions(-) diff --git a/Gemfile.lock b/Gemfile.lock index b4cefd61..38c52dd4 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -1,6 +1,6 @@ GIT remote: https://github.com/ncbo/goo.git - revision: 87e991b0e720c580a71e2c2c10f9ab44183db322 + revision: c7ee4a6a44cdf69c8186decc5da0c80887af1b11 branch: develop specs: goo (0.0.2) @@ -26,7 +26,7 @@ GIT GIT remote: https://github.com/ncbo/ontologies_linked_data.git - revision: a466d530877cb48cdfb811d0b61ecaabd2b835eb + revision: d885010c4dcb79a71fd161988a8feceb77331b58 branch: develop specs: ontologies_linked_data (0.0.1) @@ -46,7 +46,7 @@ GIT GIT remote: https://github.com/ncbo/sparql-client.git - revision: 55e7dbf858eb571c767bc67868f9af61663859cb + revision: 1657f0dd69fd4b522d3549a6848670175f5e98cc branch: develop specs: sparql-client (1.0.1) @@ -78,7 +78,7 @@ GEM public_suffix (>= 2.0.2, < 6.0) base64 (0.2.0) bcrypt (3.1.20) - bigdecimal (3.1.6) + bigdecimal (3.1.7) builder (3.2.4) coderay (1.1.3) concurrent-ruby (1.2.3) @@ -98,7 +98,7 @@ GEM faraday-net_http (>= 2.0, < 3.1) ruby2_keywords (>= 0.0.4) faraday-net_http (3.0.2) - faraday-retry (2.2.0) + faraday-retry (2.2.1) faraday (~> 2.0) ffi (1.16.3) gapic-common (0.21.1) @@ -137,7 +137,7 @@ GEM google-protobuf (~> 3.18) googleapis-common-protos-types (~> 1.7) grpc (~> 1.41) - googleapis-common-protos-types (1.13.0) + googleapis-common-protos-types (1.14.0) google-protobuf (~> 3.18) googleauth (1.11.0) faraday (>= 1.0, < 3.a) @@ -159,8 +159,8 @@ GEM httpclient (2.8.3) i18n (0.9.5) concurrent-ruby (~> 1.0) - json (2.7.1) - json_pure (2.7.1) + json (2.7.2) + json_pure (2.7.2) jwt (2.8.1) base64 launchy (2.5.2) @@ -174,7 +174,7 @@ GEM net-imap net-pop net-smtp - method_source (1.0.0) + method_source (1.1.0) mime-types (3.5.2) mime-types-data (~> 3.2015) mime-types-data (3.2024.0305) @@ -184,14 +184,14 @@ GEM redis multi_json (1.15.0) net-http-persistent (2.9.4) - net-imap (0.4.10) + net-imap (0.3.7) date net-protocol net-pop (0.1.2) net-protocol net-protocol (0.2.2) timeout - net-smtp (0.4.0.1) + net-smtp (0.5.0) net-protocol netrc (0.11.0) oj (3.16.3) @@ -205,16 +205,16 @@ GEM pry (0.14.2) coderay (~> 1.1) method_source (~> 1.0) - public_suffix (5.0.4) - rack (3.0.9.1) + public_suffix (5.0.5) + rack (3.0.10) rack-test (2.1.0) rack (>= 1.3) - rake (13.1.0) + rake (13.2.1) rdf (1.0.8) addressable (>= 2.2) - redis (5.1.0) - redis-client (>= 0.17.0) - redis-client (0.21.0) + redis (5.2.0) + redis-client (>= 0.22.0) + redis-client (0.22.1) connection_pool representable (3.2.0) declarative (< 0.1.0) @@ -227,7 +227,7 @@ GEM netrc (~> 0.8) retriable (3.1.2) rexml (3.2.6) - rsolr (2.5.0) + rsolr (2.6.0) builder (>= 2.1.2) faraday (>= 0.9, < 3, != 2.0.0) ruby-xxHash (0.4.0.2) @@ -294,4 +294,4 @@ DEPENDENCIES webrick BUNDLED WITH - 2.4.22 + 2.3.15 From ec8f5367b090e851ff199e869432efd89f3d14bc Mon Sep 17 00:00:00 2001 From: mdorf Date: Wed, 24 Apr 2024 14:19:04 -0700 Subject: [PATCH 03/11] Gemfile.lock update after merging pull request #150 --- Gemfile.lock | 13 ++++++++----- 1 file changed, 8 insertions(+), 5 deletions(-) diff --git a/Gemfile.lock b/Gemfile.lock index 38c52dd4..b7cf36af 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -1,6 +1,6 @@ GIT remote: https://github.com/ncbo/goo.git - revision: c7ee4a6a44cdf69c8186decc5da0c80887af1b11 + revision: 563a47fa4329ffb8a774731be210f44a054726c0 branch: develop specs: goo (0.0.2) @@ -8,6 +8,7 @@ GIT pry rdf (= 1.0.8) redis + request_store rest-client rsolr sparql-client @@ -15,7 +16,7 @@ GIT GIT remote: https://github.com/ncbo/ncbo_annotator.git - revision: fe0783c542479ed0a12da5663ef28e1673e80eba + revision: a427ff3719f88f887e04ac695a002ef24ce3afb8 branch: develop specs: ncbo_annotator (0.0.1) @@ -26,7 +27,7 @@ GIT GIT remote: https://github.com/ncbo/ontologies_linked_data.git - revision: d885010c4dcb79a71fd161988a8feceb77331b58 + revision: ab7b2f0eb6c4256ff1a01ace55b5a966c040e1ca branch: develop specs: ontologies_linked_data (0.0.1) @@ -184,7 +185,7 @@ GEM redis multi_json (1.15.0) net-http-persistent (2.9.4) - net-imap (0.3.7) + net-imap (0.4.10) date net-protocol net-pop (0.1.2) @@ -220,6 +221,8 @@ GEM declarative (< 0.1.0) trailblazer-option (>= 0.1.1, < 0.2.0) uber (< 0.2.0) + request_store (1.6.0) + rack (>= 1.4) rest-client (2.1.0) http-accept (>= 1.7.0, < 2.0) http-cookie (>= 1.0.2, < 2.0) @@ -294,4 +297,4 @@ DEPENDENCIES webrick BUNDLED WITH - 2.3.15 + 2.4.22 From c47a445eba2aef58efe68a36e800f649b8c76cfa Mon Sep 17 00:00:00 2001 From: mdorf Date: Wed, 24 Apr 2024 14:32:04 -0700 Subject: [PATCH 04/11] Gemfile.lock update --- Gemfile.lock | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/Gemfile.lock b/Gemfile.lock index b7cf36af..190f2b40 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -1,6 +1,6 @@ GIT remote: https://github.com/ncbo/goo.git - revision: 563a47fa4329ffb8a774731be210f44a054726c0 + revision: 5d911f587f22059581ae3e713e5fe9bde9de82e7 branch: develop specs: goo (0.0.2) @@ -16,7 +16,7 @@ GIT GIT remote: https://github.com/ncbo/ncbo_annotator.git - revision: a427ff3719f88f887e04ac695a002ef24ce3afb8 + revision: 36125bdaafd36f394263b9495af96d21a81b1217 branch: develop specs: ncbo_annotator (0.0.1) @@ -27,7 +27,7 @@ GIT GIT remote: https://github.com/ncbo/ontologies_linked_data.git - revision: ab7b2f0eb6c4256ff1a01ace55b5a966c040e1ca + revision: cf8100e47090be1bfb79e7ea642eb6a528013efa branch: develop specs: ontologies_linked_data (0.0.1) From 252edb210cde06bdeed6404eb2d78f3204a1b10d Mon Sep 17 00:00:00 2001 From: Alex Skrenchuk Date: Thu, 25 Apr 2024 14:44:54 -0700 Subject: [PATCH 05/11] Gemfile Update --- Gemfile.lock | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/Gemfile.lock b/Gemfile.lock index 190f2b40..72b41e55 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -1,6 +1,6 @@ GIT remote: https://github.com/ncbo/goo.git - revision: 5d911f587f22059581ae3e713e5fe9bde9de82e7 + revision: 33583fd1c1d72b449cd6bb91815e3422b8448983 branch: develop specs: goo (0.0.2) @@ -16,7 +16,7 @@ GIT GIT remote: https://github.com/ncbo/ncbo_annotator.git - revision: 36125bdaafd36f394263b9495af96d21a81b1217 + revision: f9a1be204e81d72f408927b8f60c0be208611929 branch: develop specs: ncbo_annotator (0.0.1) @@ -27,7 +27,7 @@ GIT GIT remote: https://github.com/ncbo/ontologies_linked_data.git - revision: cf8100e47090be1bfb79e7ea642eb6a528013efa + revision: da1642ed8f9f04db2e427e35d88f235a55138d03 branch: develop specs: ontologies_linked_data (0.0.1) From 56de5c91e3b8b7c17bafcc2bec7f439fd9629c0e Mon Sep 17 00:00:00 2001 From: Jennifer Vendetti Date: Fri, 26 Apr 2024 16:07:32 -0700 Subject: [PATCH 06/11] Update .gitignore --- .gitignore | 1 + 1 file changed, 1 insertion(+) diff --git a/.gitignore b/.gitignore index ccf97ea0..0cd105fc 100644 --- a/.gitignore +++ b/.gitignore @@ -6,6 +6,7 @@ config/*.p12 config/*.json data/ projectFilesBackup/ +.bundle .ruby-version repo* *.turtle From afbb335a5fc562d33ce01fdc4f31e0e52294c6c3 Mon Sep 17 00:00:00 2001 From: Jennifer Vendetti Date: Fri, 26 Apr 2024 16:07:56 -0700 Subject: [PATCH 07/11] Add faraday and follow redirects gems --- Gemfile | 2 ++ Gemfile.lock | 4 ++++ 2 files changed, 6 insertions(+) diff --git a/Gemfile b/Gemfile index 8b180c6e..1a60adbd 100644 --- a/Gemfile +++ b/Gemfile @@ -2,6 +2,8 @@ source 'https://rubygems.org' gemspec +gem 'faraday', '~> 2' +gem 'faraday-follow_redirects', '~> 0' gem 'ffi' # This is needed temporarily to pull the Google Universal Analytics (UA) diff --git a/Gemfile.lock b/Gemfile.lock index 72b41e55..2db69597 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -98,6 +98,8 @@ GEM base64 faraday-net_http (>= 2.0, < 3.1) ruby2_keywords (>= 0.0.4) + faraday-follow_redirects (0.3.0) + faraday (>= 1, < 3) faraday-net_http (3.0.2) faraday-retry (2.2.1) faraday (~> 2.0) @@ -273,6 +275,8 @@ PLATFORMS DEPENDENCIES cube-ruby email_spec + faraday (~> 2) + faraday-follow_redirects (~> 0) ffi goo! google-analytics-data From ab20f8a9a1ba11415716ee15f88955eea7ac741b Mon Sep 17 00:00:00 2001 From: Jennifer Vendetti Date: Fri, 26 Apr 2024 16:11:12 -0700 Subject: [PATCH 08/11] Replace GraphQL queries with HTTP --- lib/ncbo_cron/obofoundry_sync.rb | 71 +++++++++----------------------- 1 file changed, 19 insertions(+), 52 deletions(-) diff --git a/lib/ncbo_cron/obofoundry_sync.rb b/lib/ncbo_cron/obofoundry_sync.rb index 2437a9f3..23dd6e8d 100644 --- a/lib/ncbo_cron/obofoundry_sync.rb +++ b/lib/ncbo_cron/obofoundry_sync.rb @@ -1,7 +1,6 @@ -require 'base64' -require 'json' -require 'net/http' -require 'uri' +require 'faraday' +require 'faraday/follow_redirects' +require 'multi_json' module NcboCron module Models @@ -9,9 +8,6 @@ class OBOFoundrySync def initialize @logger = Logger.new(STDOUT) - @oauth_token = Base64.decode64(NcboCron.settings.git_repo_access_token) - @graphql_uri = URI.parse("https://api.github.com/graphql") - @request_options = { use_ssl: @graphql_uri.scheme == "https" } end def run @@ -19,24 +15,25 @@ def run map = get_ids_to_acronyms_map onts = get_obofoundry_ontologies - @logger.info("Found #{onts.size} OBO Library ontologies") + @logger.info("Found #{onts.size} OBO Foundry ontologies") - # Are any OBO Library ontologies missing from BioPortal? + # Are any OBO Foundry ontologies missing from BioPortal? missing_onts = [] - active_onts = onts.reject { |ont| ont.key?("is_obsolete") } + active_onts = onts.reject { |ont| ont.key?('is_obsolete') } + @logger.info("#{active_onts.size} OBO Foundry ontologies are currently active") active_onts.each do |ont| - if not map.key?(ont["id"]) + if not map.key?(ont['id']) missing_onts << ont - @logger.info("Missing OBO Library ontology: #{ont['title']} (#{ont['id']})") + @logger.info("Missing OBO Foundry ontology: #{ont['title']} (#{ont['id']})") end end - # Have any of the OBO Library ontologies that BioPortal hosts become obsolete? + # Have any of the OBO Foundry ontologies that BioPortal hosts become obsolete? obsolete_onts = [] - ids = active_onts.map{ |ont| ont["id"] } + ids = active_onts.map{ |ont| ont['id'] } obsolete_ids = map.keys - ids obsolete_ids.each do |id| - ont = onts.find{ |ont| ont["id"] == id } + ont = onts.find{ |ont| ont['id'] == id } @logger.info("Deprecated OBO Library ontology: #{ont['title']} (#{ont['id']})") obsolete_onts << ont end @@ -45,49 +42,19 @@ def run end def get_ids_to_acronyms_map - query = "query { - repository(name: \"ncbo.github.io\", owner: \"ncbo\") { - object(expression: \"master:oboids_to_bpacronyms.json\") { - ... on Blob { - text - } - } - } - }" - - response = issue_request(query) - JSON.parse(response) + response = Faraday.get('https://ncbo.github.io/oboids_to_bpacronyms.json') + MultiJson.load(response.body) end def get_obofoundry_ontologies - query = "query { - repository(name: \"OBOFoundry.github.io\", owner: \"OBOFoundry\") { - object(expression: \"master:registry/ontologies.jsonld\") { - ... on Blob { - text - } - } - } - }" - - response = issue_request(query) - ont_registry = JSON.parse(response) - ont_registry["ontologies"].to_a - end - - def issue_request(query) - request = Net::HTTP::Post.new(@graphql_uri) - request["Authorization"] = "bearer #{@oauth_token}" - request.body = JSON.dump({"query" => query}) - - response = Net::HTTP.start(@graphql_uri.hostname, @graphql_uri.port, @request_options) do |http| - http.request(request) + conn = Faraday.new do |faraday| + faraday.response :follow_redirects + faraday.adapter Faraday.default_adapter end + response = conn.get('http://purl.obolibrary.org/meta/ontologies.jsonld') - parsed = JSON.parse(response.body) - parsed.dig("data", "repository", "object", "text") + MultiJson.load(response.body)['ontologies'] end - end end end From fcd37b869308bebf4535d4eedf2d194c841fd313 Mon Sep 17 00:00:00 2001 From: Jennifer Vendetti Date: Fri, 26 Apr 2024 16:15:33 -0700 Subject: [PATCH 09/11] Update Gemfile.lock --- Gemfile.lock | 13 +++++++------ 1 file changed, 7 insertions(+), 6 deletions(-) diff --git a/Gemfile.lock b/Gemfile.lock index 2db69597..fa2be763 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -94,13 +94,12 @@ GEM htmlentities (~> 4.3.3) launchy (~> 2.1) mail (~> 2.7) - faraday (2.8.1) - base64 - faraday-net_http (>= 2.0, < 3.1) - ruby2_keywords (>= 0.0.4) + faraday (2.9.0) + faraday-net_http (>= 2.0, < 3.2) faraday-follow_redirects (0.3.0) faraday (>= 1, < 3) - faraday-net_http (3.0.2) + faraday-net_http (3.1.0) + net-http faraday-retry (2.2.1) faraday (~> 2.0) ffi (1.16.3) @@ -186,6 +185,8 @@ GEM mlanett-redis-lock (0.2.7) redis multi_json (1.15.0) + net-http (0.4.1) + uri net-http-persistent (2.9.4) net-imap (0.4.10) date @@ -236,7 +237,6 @@ GEM builder (>= 2.1.2) faraday (>= 0.9, < 3, != 2.0.0) ruby-xxHash (0.4.0.2) - ruby2_keywords (0.0.5) rubyzip (2.3.2) rufus-scheduler (2.0.24) tzinfo (>= 0.3.22) @@ -264,6 +264,7 @@ GEM tzinfo (2.0.6) concurrent-ruby (~> 1.0) uber (0.1.0) + uri (0.13.0) uuid (2.3.9) macaddr (~> 1.0) webrick (1.8.1) From 290c86de0ec957d73a2187b012a1fdf7ac5afabf Mon Sep 17 00:00:00 2001 From: Jennifer Vendetti Date: Fri, 26 Apr 2024 17:14:07 -0700 Subject: [PATCH 10/11] Move faraday gems to the gemspec --- Gemfile | 2 -- Gemfile.lock | 17 ++++++++--------- ncbo_cron.gemspec | 2 ++ 3 files changed, 10 insertions(+), 11 deletions(-) diff --git a/Gemfile b/Gemfile index 1a60adbd..8b180c6e 100644 --- a/Gemfile +++ b/Gemfile @@ -2,8 +2,6 @@ source 'https://rubygems.org' gemspec -gem 'faraday', '~> 2' -gem 'faraday-follow_redirects', '~> 0' gem 'ffi' # This is needed temporarily to pull the Google Universal Analytics (UA) diff --git a/Gemfile.lock b/Gemfile.lock index fa2be763..c4298f48 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -60,6 +60,8 @@ PATH specs: ncbo_cron (0.0.1) dante + faraday (~> 2) + faraday-follow_redirects (~> 0) goo google-analytics-data mlanett-redis-lock @@ -94,12 +96,13 @@ GEM htmlentities (~> 4.3.3) launchy (~> 2.1) mail (~> 2.7) - faraday (2.9.0) - faraday-net_http (>= 2.0, < 3.2) + faraday (2.8.1) + base64 + faraday-net_http (>= 2.0, < 3.1) + ruby2_keywords (>= 0.0.4) faraday-follow_redirects (0.3.0) faraday (>= 1, < 3) - faraday-net_http (3.1.0) - net-http + faraday-net_http (3.0.2) faraday-retry (2.2.1) faraday (~> 2.0) ffi (1.16.3) @@ -185,8 +188,6 @@ GEM mlanett-redis-lock (0.2.7) redis multi_json (1.15.0) - net-http (0.4.1) - uri net-http-persistent (2.9.4) net-imap (0.4.10) date @@ -237,6 +238,7 @@ GEM builder (>= 2.1.2) faraday (>= 0.9, < 3, != 2.0.0) ruby-xxHash (0.4.0.2) + ruby2_keywords (0.0.5) rubyzip (2.3.2) rufus-scheduler (2.0.24) tzinfo (>= 0.3.22) @@ -264,7 +266,6 @@ GEM tzinfo (2.0.6) concurrent-ruby (~> 1.0) uber (0.1.0) - uri (0.13.0) uuid (2.3.9) macaddr (~> 1.0) webrick (1.8.1) @@ -276,8 +277,6 @@ PLATFORMS DEPENDENCIES cube-ruby email_spec - faraday (~> 2) - faraday-follow_redirects (~> 0) ffi goo! google-analytics-data diff --git a/ncbo_cron.gemspec b/ncbo_cron.gemspec index c8faa03d..e48d7e7f 100644 --- a/ncbo_cron.gemspec +++ b/ncbo_cron.gemspec @@ -15,6 +15,8 @@ Gem::Specification.new do |gem| gem.require_paths = ["lib"] gem.add_dependency("dante") + gem.add_dependency('faraday', '~> 2') + gem.add_dependency('faraday-follow_redirects', '~> 0') gem.add_dependency("goo") gem.add_dependency("google-analytics-data") gem.add_dependency("mlanett-redis-lock") From da577f143e5ace303116a682f31c775514be4aaf Mon Sep 17 00:00:00 2001 From: Alex Skrenchuk Date: Mon, 6 May 2024 11:35:22 -0700 Subject: [PATCH 11/11] Gemfile update --- Gemfile.lock | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/Gemfile.lock b/Gemfile.lock index c4298f48..4e13127e 100644 --- a/Gemfile.lock +++ b/Gemfile.lock @@ -16,7 +16,7 @@ GIT GIT remote: https://github.com/ncbo/ncbo_annotator.git - revision: f9a1be204e81d72f408927b8f60c0be208611929 + revision: 7531e10ad55ac66e925c099d7fc05a5a3ceae67e branch: develop specs: ncbo_annotator (0.0.1) @@ -27,7 +27,7 @@ GIT GIT remote: https://github.com/ncbo/ontologies_linked_data.git - revision: da1642ed8f9f04db2e427e35d88f235a55138d03 + revision: a3f6cf0493bb595011f98acf95efda33111c537b branch: develop specs: ontologies_linked_data (0.0.1) @@ -151,10 +151,10 @@ GEM multi_json (~> 1.11) os (>= 0.9, < 2.0) signet (>= 0.16, < 2.a) - grpc (1.62.0) + grpc (1.63.0) google-protobuf (~> 3.25) googleapis-common-protos-types (~> 1.0) - grpc (1.62.0-x86_64-linux) + grpc (1.63.0-x86_64-linux) google-protobuf (~> 3.25) googleapis-common-protos-types (~> 1.0) htmlentities (4.3.4) @@ -225,7 +225,7 @@ GEM declarative (< 0.1.0) trailblazer-option (>= 0.1.1, < 0.2.0) uber (< 0.2.0) - request_store (1.6.0) + request_store (1.7.0) rack (>= 1.4) rest-client (2.1.0) http-accept (>= 1.7.0, < 2.0)